GREMLIN Structures

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

Cytochrome bd oxidase

Last updated: 1439573862

Organism:	ECOLI
Function:	known
Type:	MEM

CYDA (Cytochrome bd ubiquinol oxidase subunit 1)
Uniprot: P0ABJ9
Ecogene: EG10173

CYDB (Cytochrome bd ubiquinol oxidase subunit 2)
Uniprot P0ABK2
Ecogene: EG10174

Co-evolution data:
The region between 312-377 is only found in proteobacteria, and most sequences do not have this region. In order to get a uniform alignment this region was initially excluded.

(CYDA 1-311, 378-502) - 1421289737
(CYDB) - 1420187115
(CYDA 1-311, 378-502)_CYDB - 1039

It was later rebuild using the following data:

(CYDA 290-400) - 1420653741
(CYDA) - 1420187239

Notes:

There is very weak (though consistent) signal with CYDA vs CYDX. We'll have to revisit this interaction when more sequences are available: 2529 (updated 2015_06). Model based on this interaction is attached, but maybe incorrect.

Files

File

CydA_CydB_26Feb2015.pdb

CYDA_CYDB_TRIM_30Mar2015.zip

CydX_CydA_CydB.pdb

cyd_function.png

Page generated in 0.003 seconds.