GREMLIN Database
PF09828 - Chromate resistance exported protein
UniProt: W0REN7 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_10
Length: 139 (137)
Sequences: 5776 (2913)
Seq/√Len: 248.8
META:

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
62_R70_A3.6721.00
55_E71_K3.2641.00
74_V79_L3.1101.00
69_L79_L2.9921.00
56_L72_Y2.5501.00
88_G100_A2.5181.00
123_H126_V2.5061.00
59_D71_K2.4371.00
36_D39_S2.2261.00
15_C64_S2.2161.00
97_A100_A2.1721.00
66_D87_R2.1501.00
62_R67_A2.1291.00
6_Q33_P2.0751.00
23_I68_F1.9841.00
3_I40_E1.9721.00
40_E44_T1.9651.00
114_F123_H1.9121.00
106_I127_L1.8961.00
84_T97_A1.8611.00
29_F49_F1.7641.00
15_C68_F1.7551.00
13_V124_G1.6901.00
1_Q28_E1.6851.00
39_S43_R1.6641.00
119_E122_R1.6401.00
133_A136_R1.6201.00
119_E123_H1.5551.00
40_E43_R1.5411.00
75_D80_D1.5261.00
81_T84_T1.5191.00
69_L83_A1.4911.00
114_F119_E1.4661.00
110_L124_G1.4531.00
113_L133_A1.4401.00
123_H130_A1.4081.00
88_G96_L1.3981.00
50_D58_H1.3741.00
121_L125_F1.3581.00
48_P54_V1.3281.00
95_D101_A1.3271.00
30_L46_A1.3161.00
66_D83_A1.3121.00
66_D91_T1.2991.00
107_S110_L1.2731.00
116_D119_E1.2551.00
103_L128_Y1.2521.00
30_L40_E1.2451.00
81_T97_A1.2031.00
8_P13_V1.2001.00
105_A134_W1.1901.00
59_D70_A1.1501.00
48_P55_E1.1191.00
8_P120_M1.1021.00
85_I135_C1.1021.00
47_V55_E1.0971.00
39_S42_A1.0961.00
38_A51_V1.0941.00
89_A104_L1.0861.00
64_S68_F1.0841.00
111_S120_M1.0641.00
120_M124_G1.0621.00
104_L108_L1.0621.00
68_F72_Y1.0571.00
133_A137_E1.0531.00
87_R91_T1.0481.00
112_R137_E1.0431.00
108_L111_S1.0391.00
118_H122_R1.0301.00
88_G97_A1.0231.00
82_I135_C1.0111.00
18_L65_F1.0071.00
20_A27_A0.9901.00
20_A125_F0.9791.00
59_D62_R0.9781.00
64_S67_A0.9751.00
16_P121_L0.9601.00
38_A54_V0.9591.00
69_L80_D0.9541.00
80_D84_T0.9451.00
76_D132_Y0.9451.00
106_I131_L0.9411.00
56_L71_K0.9351.00
113_L123_H0.9281.00
107_S124_G0.9271.00
23_I72_Y0.9261.00
94_L104_L0.9201.00
43_R46_A0.9181.00
48_P57_S0.9051.00
82_I86_V0.8911.00
87_R95_D0.8901.00
58_H90_D0.8841.00
102_G109_G0.8430.99
56_L68_F0.8380.99
106_I109_G0.8370.99
50_D63_C0.8350.99
85_I103_L0.8330.99
99_Q102_G0.8330.99
87_R93_R0.8320.99
7_H120_M0.8280.99
107_S128_Y0.8110.99
57_S67_A0.8030.99
59_D67_A0.8000.99
58_H63_C0.7940.99
92_A104_L0.7890.99
76_D136_R0.7830.99
61_P93_R0.7830.99
88_G95_D0.7810.99
56_L64_S0.7720.99
30_L44_T0.7630.99
38_A53_G0.7560.99
38_A42_A0.7530.99
110_L120_M0.7530.99
63_C91_T0.7490.98
9_K107_S0.7440.98
30_L37_V0.7400.98
9_K108_L0.7360.98
114_F120_M0.7170.98
37_V41_A0.7160.98
61_P94_L0.7030.98
129_D133_A0.7030.98
8_P125_F0.6960.98
3_I32_V0.6940.98
67_A70_A0.6890.97
36_D40_E0.6850.97
106_I130_A0.6820.97
19_V68_F0.6790.97
51_V54_V0.6780.97
50_D90_D0.6770.97
8_P121_L0.6670.97
57_S64_S0.6660.97
48_P56_L0.6660.97
80_D83_A0.6620.97
13_V110_L0.6560.97
93_R96_L0.6410.96
103_L131_L0.6400.96
84_T95_D0.6390.96
122_R126_V0.6380.96
22_F132_Y0.6380.96
67_A71_K0.6380.96
34_P37_V0.6370.96
99_Q134_W0.6250.95
58_H64_S0.6250.95
1_Q44_T0.6240.95
56_L67_A0.6200.95
9_K111_S0.6190.95
6_Q32_V0.6180.95
61_P87_R0.6170.95
51_V57_S0.6160.95
10_I50_D0.6150.95
82_I85_I0.6130.95
13_V31_F0.6120.95
42_A45_G0.6100.95
110_L114_F0.6090.95
18_L74_V0.6080.95
48_P51_V0.6080.95
37_V46_A0.6060.95
101_A104_L0.6010.94
15_C19_V0.5980.94
12_R90_D0.5890.94
13_V128_Y0.5860.94
31_F121_L0.5840.93
13_V16_P0.5820.93
47_V68_F0.5790.93
31_F120_M0.5790.93
114_F126_V0.5780.93
3_I46_A0.5770.93
55_E59_D0.5740.93
112_R133_A0.5710.93
87_R96_L0.5700.93
124_G127_L0.5700.93
47_V56_L0.5700.93
110_L127_L0.5680.93
127_L130_A0.5660.92
38_A41_A0.5640.92
69_L102_G0.5630.92
14_A128_Y0.5630.92
6_Q34_P0.5610.92
46_A89_A0.5610.92
1_Q30_L0.5540.92
111_S134_W0.5530.91
13_V89_A0.5530.91
94_L101_A0.5520.91
9_K16_P0.5500.91
5_R12_R0.5450.91
69_L74_V0.5430.91
110_L126_V0.5420.91
37_V51_V0.5420.91
98_P101_A0.5300.90
81_T135_C0.5300.90
20_A122_R0.5300.90
65_F82_I0.5290.90
20_A25_A0.5290.90
10_I90_D0.5290.90
10_I107_S0.5260.89
11_D58_H0.5250.89
120_M125_F0.5240.89
33_P36_D0.5230.89
31_F125_F0.5190.89
110_L130_A0.5160.88
9_K89_A0.5110.88
50_D64_S0.5090.88
87_R97_A0.5050.87
2_W5_R0.5040.87
110_L113_L0.5030.87
35_D39_S0.5000.87
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
2xijA 2 0.9353 17.3 0.946 Contact Map
3cnhA 1 0.6978 14.7 0.948 Contact Map
4r3uA 2 0.8777 9.7 0.952 Contact Map
4gxbB 1 0.1079 8.9 0.953 Contact Map
1reqA 1 0.9496 6.5 0.955 Contact Map
1jv1A 2 0.3669 6.3 0.956 Contact Map
2oviA 2 0.4676 6.1 0.956 Contact Map
2vugA 2 0.3165 6.1 0.956 Contact Map
1wzzA 1 0.4173 5.9 0.956 Contact Map
1hjrA 2 0.4245 4.4 0.959 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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