GREMLIN Database
PF12673 - Spore coat assembly protein SafA
UniProt: D9RZD9 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_10
Length: 538 (513)
Sequences: 869 (766)
Seq/√Len: 33.8
META: 0.806

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
223_L289_A5.6081.00
499_D503_K4.4731.00
153_D164_R4.4371.00
322_R460_Q4.3951.00
221_G251_F4.1331.00
166_N302_M3.9751.00
66_G94_F3.9431.00
270_V291_L3.7941.00
37_D128_R3.6491.00
377_G407_F3.5811.00
215_G259_G3.4511.00
309_L318_V3.3251.00
33_G37_D3.2941.00
60_G102_G3.2491.00
31_L38_I3.0741.00
216_K254_F3.0631.00
375_V411_V3.0381.00
198_I227_V3.0011.00
521_L524_P2.9561.00
31_L88_V2.9361.00
319_Q468_K2.9171.00
371_D415_G2.9111.00
375_V451_L2.8871.00
209_E220_E2.8111.00
260_A297_V2.7811.00
516_I524_P2.7441.00
126_R129_E2.7431.00
528_Y531_Q2.6811.00
203_G223_L2.6761.00
502_W506_K2.5891.00
505_A510_V2.5771.00
193_P231_A2.5151.00
322_R462_D2.4561.00
319_Q466_D2.4231.00
339_K444_E2.4030.99
272_V289_A2.3610.99
227_V285_L2.3300.99
327_Q457_K2.3270.99
30_L126_R2.3150.99
280_K283_R2.2980.99
264_M297_V2.2660.99
107_M142_V2.2120.99
41_V124_E2.2090.99
320_K462_D2.1720.99
518_A536_P2.1620.99
493_Y499_D2.1390.99
33_G128_R2.1250.99
68_I134_I2.1250.99
213_L216_K2.0840.98
38_I124_E2.0830.98
159_D313_S2.0580.98
46_A115_V2.0480.98
505_A511_T2.0480.98
499_D527_I2.0230.98
46_A118_V2.0220.98
31_L35_K1.9930.98
219_V293_I1.9860.98
222_V248_E1.9720.98
359_A431_V1.9530.98
168_R302_M1.9490.98
36_P128_R1.9450.98
26_E133_R1.9190.97
57_I62_V1.9170.97
379_L447_V1.9120.97
357_T433_S1.9110.97
11_R147_Q1.9100.97
382_E402_E1.9030.97
270_V293_I1.8890.97
218_I254_F1.8610.97
496_Q499_D1.8460.97
31_L34_G1.8390.97
426_V449_V1.8110.96
50_P527_I1.7970.96
37_D129_E1.7940.96
494_I532_R1.7930.96
198_I527_I1.7850.96
193_P229_Y1.7810.96
192_K243_H1.7600.96
361_A426_V1.7510.96
37_D126_R1.7480.95
33_G126_R1.7470.95
136_V513_E1.7260.95
335_Q430_H1.7190.95
516_I523_N1.6900.95
334_N409_V1.6900.95
174_G297_V1.6850.94
40_R75_V1.6830.94
372_K410_F1.6600.94
48_V115_V1.6590.94
368_I416_A1.6590.94
228_L384_L1.6410.94
31_L37_D1.6270.93
64_V94_F1.6250.93
523_N527_I1.6220.93
111_V138_F1.6190.93
257_V260_A1.5930.93
37_D310_F1.5900.93
209_E449_V1.5870.92
310_F506_K1.5850.92
510_V515_I1.5800.92
466_D513_E1.5720.92
521_L533_L1.5690.92
201_V277_A1.5660.92
308_D506_K1.5620.92
28_I33_G1.5590.92
512_L527_I1.5580.92
111_V140_V1.5560.92
195_I279_K1.5510.92
19_D60_G1.5440.91
259_G297_V1.5300.91
508_Y535_I1.5270.91
286_T510_V1.5260.91
321_T465_V1.5160.91
33_G129_E1.5120.90
7_K149_E1.5120.90
413_I455_V1.5090.90
31_L129_E1.5070.90
42_L85_V1.4940.90
318_V464_V1.4910.90
500_T503_K1.4750.89
105_K520_N1.4750.89
289_A498_G1.4710.89
28_I37_D1.4690.89
527_I531_Q1.4670.89
171_N301_K1.4500.89
115_V118_V1.4480.88
310_F502_W1.4460.88
503_K529_P1.4450.88
217_I257_V1.4300.88
148_I321_T1.4240.88
164_R304_E1.4140.87
459_V504_I1.4000.87
183_K288_E1.4000.87
263_D440_C1.3990.87
167_I305_V1.3850.86
283_R389_V1.3850.86
203_G275_I1.3830.86
22_Q135_V1.3820.86
164_R370_D1.3700.85
73_L199_I1.3700.85
48_V370_D1.3700.85
369_I372_K1.3610.85
15_V143_T1.3600.85
73_L384_L1.3530.85
202_E205_A1.3510.85
117_H121_S1.3460.84
31_L126_R1.3460.84
163_L503_K1.3380.84
406_P506_K1.3310.84
512_L515_I1.3290.84
255_I421_M1.3280.84
349_P387_A1.3250.83
386_V390_P1.3240.83
227_V247_A1.3030.82
317_D468_K1.3030.82
375_V426_V1.3020.82
140_V464_V1.2850.82
349_P399_H1.2850.82
162_V306_V1.2820.81
329_I521_L1.2780.81
169_V303_I1.2750.81
222_V250_P1.2730.81
205_A251_F1.2720.81
165_E307_Q1.2700.81
166_N304_E1.2590.80
48_V136_V1.2560.80
53_L177_R1.2400.79
156_G159_D1.2320.79
213_L254_F1.2310.79
129_E310_F1.2280.78
30_L33_G1.1970.77
115_V533_L1.1940.76
60_G337_V1.1930.76
100_I103_A1.1880.76
28_I255_I1.1860.76
188_V245_M1.1860.76
103_A142_V1.1820.76
28_I178_T1.1790.76
72_A429_E1.1760.75
493_Y504_I1.1750.75
184_S439_D1.1720.75
112_K138_F1.1710.75
15_V18_E1.1710.75
61_K240_Q1.1690.75
33_G36_P1.1650.75
260_A375_V1.1630.75
96_F99_K1.1570.74
374_I408_T1.1550.74
73_L502_W1.1440.73
321_T411_V1.1410.73
179_Q290_V1.1370.73
480_E515_I1.1370.73
50_P306_V1.1360.73
30_L129_E1.1330.73
310_F501_L1.1270.72
14_Q146_V1.1220.72
186_V336_V1.1160.71
377_G406_P1.1060.71
133_R334_N1.1050.71
382_E400_F1.1000.70
359_A428_V1.1000.70
165_E459_V1.0920.70
311_S535_I1.0920.70
225_I249_V1.0900.70
25_V68_I1.0900.70
523_N526_L1.0870.69
140_V192_K1.0870.69
319_Q354_I1.0850.69
33_G308_D1.0830.69
310_F511_T1.0820.69
372_K412_E1.0820.69
173_V264_M1.0810.69
223_L414_P1.0800.69
60_G182_V1.0780.69
163_L307_Q1.0740.68
297_V410_F1.0690.68
333_E456_T1.0650.68
62_V140_V1.0620.68
177_R292_D1.0610.67
80_S405_V1.0600.67
280_K284_T1.0560.67
511_T515_I1.0460.66
335_Q429_E1.0420.66
42_L225_I1.0340.65
502_W508_Y1.0340.65
512_L516_I1.0330.65
378_V406_P1.0300.65
223_L251_F1.0290.65
113_S136_V1.0280.65
344_V515_I1.0270.65
138_F255_I1.0270.65
340_E405_V1.0230.65
290_V534_I1.0190.64
8_E301_K1.0180.64
73_L446_R1.0160.64
369_I374_I1.0120.64
367_R374_I1.0070.63
194_D282_E1.0040.63
61_K216_K1.0030.63
218_I259_G0.9990.63
488_P491_T0.9980.63
342_L453_A0.9980.63
20_R162_V0.9980.63
215_G382_E0.9960.63
156_G375_V0.9950.62
31_L128_R0.9940.62
70_V113_S0.9840.62
62_V417_R0.9810.61
139_F465_V0.9790.61
26_E29_I0.9780.61
354_I512_L0.9720.61
373_V453_A0.9720.61
226_S246_E0.9710.61
495_V504_I0.9700.60
69_D98_V0.9630.60
180_A293_I0.9560.59
520_N527_I0.9550.59
396_Q402_E0.9540.59
283_R440_C0.9540.59
116_E137_E0.9510.59
48_V113_S0.9500.59
312_P384_L0.9460.58
149_E379_L0.9410.58
31_L41_V0.9400.58
71_Q87_F0.9390.58
196_L232_D0.9390.58
182_V209_E0.9370.58
28_I129_E0.9360.58
192_K354_I0.9350.58
370_D534_I0.9340.57
211_K388_S0.9320.57
157_P291_L0.9300.57
72_A88_V0.9240.57
65_E95_S0.9190.56
340_E408_T0.9160.56
220_E262_E0.9150.56
216_K512_L0.9080.55
492_I532_R0.9080.55
216_K252_T0.9050.55
434_K439_D0.9050.55
359_A447_V0.9050.55
308_D502_W0.9050.55
176_A258_E0.9030.55
276_R288_E0.9020.55
33_G281_D0.9000.55
207_I222_V0.9000.55
28_I177_R0.8990.55
133_R505_A0.8980.54
217_I297_V0.8970.54
221_G432_S0.8900.54
64_V138_F0.8860.53
109_V142_V0.8840.53
37_D446_R0.8790.53
329_I457_K0.8780.53
150_I470_I0.8740.52
37_D228_L0.8740.52
112_K344_V0.8720.52
310_F512_L0.8700.52
61_K413_I0.8650.52
471_E479_E0.8640.52
138_F274_H0.8570.51
77_C339_K0.8550.51
28_I128_R0.8540.51
85_V138_F0.8540.51
44_V122_C0.8530.51
515_I535_I0.8530.51
62_V103_A0.8520.51
96_F494_I0.8520.51
9_L198_I0.8490.50
513_E517_Q0.8480.50
441_R445_V0.8460.50
411_V429_E0.8440.50
222_V372_K0.8410.50
168_R300_P0.8410.50
157_P279_K0.8390.50
532_R536_P0.8370.49
198_I365_D0.8290.49
8_E85_V0.8280.49
428_V431_V0.8280.49
180_A253_Q0.8270.49
216_K220_E0.8240.48
250_P406_P0.8240.48
132_V447_V0.8230.48
259_G515_I0.8220.48
7_K164_R0.8210.48
388_S468_K0.8210.48
515_I519_N0.8200.48
102_G372_K0.8180.48
497_K529_P0.8180.48
499_D529_P0.8180.48
284_T375_V0.8180.48
109_V113_S0.8170.48
215_G344_V0.8150.48
359_A379_L0.8130.47
246_E430_H0.8120.47
38_I464_V0.8110.47
109_V140_V0.8090.47
186_V191_K0.8090.47
147_Q367_R0.8080.47
521_L527_I0.8070.47
251_F415_G0.8060.47
48_V152_V0.8060.47
324_K460_Q0.8050.47
18_E174_G0.8040.47
233_V238_P0.8040.47
198_I303_I0.8040.47
129_E491_T0.8030.46
40_R339_K0.8020.46
112_K329_I0.8020.46
213_L252_T0.8010.46
183_K194_D0.8000.46
89_E373_V0.7990.46
205_A272_V0.7990.46
184_S298_F0.7970.46
410_F445_V0.7970.46
487_S535_I0.7940.46
495_V532_R0.7940.46
124_E242_V0.7930.46
317_D470_I0.7930.46
417_R500_T0.7920.46
65_E451_L0.7910.45
295_A533_L0.7870.45
13_D133_R0.7860.45
387_A399_H0.7860.45
444_E451_L0.7850.45
213_L220_E0.7840.45
102_G351_I0.7830.45
111_V424_F0.7830.45
196_L231_A0.7830.45
194_D431_V0.7830.45
492_I502_W0.7820.45
496_Q518_A0.7820.45
42_L52_S0.7780.44
186_V247_A0.7770.44
178_T253_Q0.7770.44
451_L515_I0.7750.44
495_V527_I0.7720.44
387_A397_P0.7720.44
245_M285_L0.7720.44
326_D421_M0.7680.44
505_A519_N0.7680.44
60_G100_I0.7660.43
35_K215_G0.7650.43
212_L344_V0.7640.43
24_V135_V0.7620.43
289_A419_D0.7620.43
219_V270_V0.7610.43
464_V468_K0.7590.43
162_V409_V0.7590.43
227_V401_V0.7540.42
80_S270_V0.7520.42
52_S515_I0.7520.42
363_V366_T0.7510.42
368_I529_P0.7500.42
22_Q90_G0.7490.42
38_I311_S0.7480.42
483_K507_R0.7470.42
385_Y530_G0.7460.42
210_T260_A0.7450.42
109_V133_R0.7450.42
435_V460_Q0.7450.42
20_R140_V0.7450.42
470_I479_E0.7440.42
81_G232_D0.7420.41
207_I359_A0.7410.41
115_V134_I0.7410.41
428_V447_V0.7390.41
52_S56_N0.7380.41
17_G496_Q0.7350.41
44_V48_V0.7350.41
389_V395_Q0.7320.41
404_E407_F0.7310.41
135_V422_L0.7290.40
182_V251_F0.7280.40
221_G250_P0.7280.40
42_L515_I0.7270.40
416_A455_V0.7230.40
25_V247_A0.7230.40
138_F301_K0.7230.40
52_S211_K0.7220.40
449_V468_K0.7200.40
113_S138_F0.7190.40
173_V375_V0.7190.40
419_D491_T0.7180.39
137_E309_L0.7170.39
426_V451_L0.7160.39
48_V90_G0.7160.39
218_I491_T0.7140.39
414_P419_D0.7120.39
464_V467_V0.7120.39
220_E536_P0.7120.39
311_S510_V0.7120.39
70_V132_V0.7110.39
287_V449_V0.7110.39
85_V217_I0.7100.39
194_D283_R0.7090.39
345_P401_V0.7090.39
28_I126_R0.7070.39
77_C216_K0.7070.39
4_K327_Q0.7050.38
28_I288_E0.7040.38
29_I88_V0.7030.38
328_V464_V0.7030.38
416_A419_D0.7010.38
338_V448_V0.7010.38
64_V228_L0.7000.38
182_V287_V0.6990.38
41_V419_D0.6990.38
325_V455_V0.6980.38
114_R360_K0.6960.38
315_M470_I0.6960.38
277_A423_D0.6940.38
184_S211_K0.6920.37
88_V122_C0.6920.37
9_L147_Q0.6910.37
25_V493_Y0.6910.37
89_E444_E0.6910.37
217_I531_Q0.6910.37
205_A291_L0.6890.37
268_V328_V0.6880.37
342_L383_T0.6870.37
74_Y229_Y0.6860.37
268_V383_T0.6860.37
72_A140_V0.6860.37
169_V485_D0.6840.37
168_R426_V0.6840.37
217_I268_V0.6820.37
70_V92_V0.6810.37
67_S338_V0.6810.37
116_E429_E0.6800.36
344_V445_V0.6780.36
140_V375_V0.6760.36
287_V307_Q0.6750.36
156_G508_Y0.6730.36
424_F489_T0.6730.36
17_G223_L0.6720.36
504_I519_N0.6720.36
183_K227_V0.6720.36
449_V494_I0.6720.36
218_I252_T0.6710.36
288_E406_P0.6710.36
89_E363_V0.6690.36
169_V512_L0.6690.36
502_W505_A0.6690.36
128_R211_K0.6690.36
168_R217_I0.6680.36
61_K65_E0.6670.35
226_S298_F0.6660.35
496_Q503_K0.6650.35
225_I535_I0.6630.35
36_P76_G0.6620.35
128_R310_F0.6620.35
80_S155_T0.6610.35
150_I242_V0.6610.35
60_G75_V0.6610.35
332_D390_P0.6610.35
15_V141_K0.6600.35
215_G422_L0.6590.35
26_E30_L0.6590.35
367_R504_I0.6580.35
489_T536_P0.6570.35
51_Q283_R0.6570.35
495_V501_L0.6550.35
105_K219_V0.6550.35
114_R118_V0.6550.35
150_I462_D0.6550.35
495_V499_D0.6540.34
17_G163_L0.6530.34
206_R494_I0.6530.34
41_V80_S0.6520.34
314_Q471_E0.6510.34
165_E295_A0.6490.34
273_E292_D0.6490.34
325_V464_V0.6480.34
372_K420_M0.6470.34
161_Q491_T0.6460.34
129_E340_E0.6450.34
407_F438_N0.6430.34
488_P537_R0.6420.34
384_L534_I0.6420.34
231_A243_H0.6420.34
42_L339_K0.6410.33
34_G129_E0.6410.33
83_Q252_T0.6410.33
306_V409_V0.6410.33
493_Y508_Y0.6400.33
421_M458_M0.6390.33
6_S153_D0.6380.33
30_L37_D0.6350.33
115_V465_V0.6350.33
344_V379_L0.6340.33
188_V195_I0.6330.33
240_Q270_V0.6320.33
125_N277_A0.6320.33
128_R228_L0.6310.33
163_L511_T0.6300.33
231_A405_V0.6290.33
73_L505_A0.6270.32
149_E464_V0.6270.32
148_I338_V0.6260.32
456_T516_I0.6260.32
379_L443_F0.6260.32
72_A204_K0.6250.32
255_I323_L0.6240.32
384_L430_H0.6240.32
118_V251_F0.6240.32
159_D314_Q0.6230.32
68_I115_V0.6210.32
291_L305_V0.6210.32
283_R446_R0.6180.32
521_L534_I0.6180.32
58_L61_K0.6160.32
114_R137_E0.6150.32
23_T34_G0.6140.31
24_V117_H0.6140.31
29_I251_F0.6140.31
153_D513_E0.6140.31
471_E525_D0.6130.31
80_S354_I0.6120.31
35_K299_E0.6110.31
72_A205_A0.6100.31
46_A185_D0.6080.31
211_K424_F0.6070.31
263_D299_E0.6070.31
115_V214_D0.6060.31
170_D298_F0.6050.31
97_F443_F0.6050.31
61_K536_P0.6040.31
212_L440_C0.6040.31
533_L536_P0.6040.31
101_P227_V0.6040.31
306_V464_V0.6030.31
77_C81_G0.6020.31
330_G500_T0.6010.31
176_A293_I0.6000.30
320_K464_V0.6000.30
46_A92_V0.5980.30
306_V419_D0.5970.30
255_I360_K0.5970.30
526_L529_P0.5960.30
130_I230_V0.5950.30
92_V354_I0.5950.30
182_V223_L0.5950.30
219_V494_I0.5940.30
489_T532_R0.5940.30
95_S160_L0.5940.30
28_I31_L0.5930.30
317_D369_I0.5920.30
323_L463_V0.5890.30
136_V449_V0.5870.30
416_A420_M0.5870.30
101_P496_Q0.5870.30
142_V215_G0.5860.29
59_D313_S0.5860.29
61_K254_F0.5850.29
149_E408_T0.5850.29
291_L313_S0.5840.29
178_T536_P0.5830.29
88_V133_R0.5830.29
287_V467_V0.5810.29
129_E489_T0.5800.29
154_A303_I0.5800.29
363_V406_P0.5800.29
279_K443_F0.5790.29
352_E364_T0.5780.29
48_V537_R0.5770.29
417_R469_Q0.5770.29
40_R132_V0.5770.29
117_H126_R0.5760.29
484_K537_R0.5760.29
123_K424_F0.5760.29
377_G449_V0.5750.29
380_K404_E0.5740.29
138_F212_L0.5740.29
343_T442_R0.5720.29
415_G449_V0.5710.28
61_K99_K0.5700.28
27_G463_V0.5690.28
175_E325_V0.5670.28
158_A214_D0.5670.28
494_I530_G0.5670.28
373_V454_K0.5670.28
221_G285_L0.5660.28
77_C252_T0.5650.28
13_D256_E0.5650.28
395_Q398_L0.5630.28
200_K356_K0.5620.28
212_L256_E0.5620.28
268_V292_D0.5620.28
70_V278_R0.5620.28
61_K97_F0.5610.28
28_I310_F0.5610.28
105_K130_I0.5610.28
42_L343_T0.5610.28
413_I447_V0.5600.28
85_V318_V0.5600.28
99_K295_A0.5590.28
167_I373_V0.5590.28
306_V355_F0.5590.28
479_E523_N0.5580.28
271_Q292_D0.5580.28
129_E506_K0.5560.27
126_R308_D0.5560.27
129_E209_E0.5560.27
3_V154_A0.5550.27
211_K229_Y0.5540.27
515_I533_L0.5530.27
519_N535_I0.5530.27
427_E447_V0.5520.27
24_V27_G0.5510.27
41_V307_Q0.5510.27
52_S338_V0.5500.27
132_V210_T0.5500.27
8_E191_K0.5490.27
19_D23_T0.5480.27
8_E245_M0.5470.27
385_Y397_P0.5460.27
263_D467_V0.5460.27
41_V336_V0.5460.27
258_E513_E0.5450.27
428_V459_V0.5440.27
275_I289_A0.5430.27
80_S84_P0.5420.26
361_A494_I0.5420.26
25_V73_L0.5410.26
35_K38_I0.5410.26
106_N509_N0.5410.26
33_G62_V0.5400.26
12_V446_R0.5400.26
383_T431_V0.5400.26
198_I210_T0.5390.26
317_D513_E0.5380.26
189_P453_A0.5380.26
126_R310_F0.5370.26
37_D257_V0.5360.26
178_T185_D0.5360.26
379_L417_R0.5360.26
45_E446_R0.5360.26
21_A138_F0.5360.26
278_R290_V0.5360.26
128_R520_N0.5360.26
48_V376_D0.5350.26
114_R375_V0.5350.26
197_E227_V0.5350.26
413_I463_V0.5350.26
358_N382_E0.5340.26
199_I248_E0.5340.26
415_G428_V0.5340.26
192_K201_V0.5340.26
430_H446_R0.5330.26
48_V65_E0.5310.26
8_E222_V0.5310.26
50_P202_E0.5300.26
142_V179_Q0.5300.26
140_V302_M0.5290.26
333_E450_R0.5290.26
295_A507_R0.5290.26
173_V297_V0.5270.26
118_V452_F0.5270.26
186_V287_V0.5270.26
494_I518_A0.5260.25
285_L486_S0.5260.25
502_W519_N0.5250.25
379_L457_K0.5250.25
505_A513_E0.5250.25
173_V527_I0.5250.25
5_L31_L0.5250.25
349_P385_Y0.5250.25
99_K178_T0.5250.25
11_R145_R0.5240.25
117_H135_V0.5240.25
52_S277_A0.5230.25
131_E205_A0.5230.25
31_L442_R0.5230.25
41_V154_A0.5230.25
28_I125_N0.5230.25
271_Q515_I0.5220.25
426_V453_A0.5220.25
468_K503_K0.5210.25
260_A273_E0.5210.25
230_V351_I0.5200.25
9_L255_I0.5200.25
160_L166_N0.5200.25
277_A378_V0.5200.25
298_F509_N0.5200.25
233_V451_L0.5180.25
98_V140_V0.5180.25
259_G401_V0.5180.25
23_T35_K0.5170.25
41_V311_S0.5170.25
132_V160_L0.5170.25
255_I368_I0.5160.25
116_E135_V0.5150.25
226_S244_F0.5140.25
134_I138_F0.5140.25
385_Y408_T0.5130.25
49_N285_L0.5130.25
57_I143_T0.5130.25
22_Q117_H0.5130.25
60_G81_G0.5120.25
360_K419_D0.5120.25
265_S291_L0.5120.25
10_V43_S0.5120.25
171_N299_E0.5120.25
85_V503_K0.5120.25
514_A518_A0.5110.25
85_V507_R0.5110.25
66_G264_M0.5100.24
81_G513_E0.5100.24
56_N151_V0.5090.24
132_V213_L0.5090.24
48_V425_D0.5080.24
192_K332_D0.5070.24
193_P283_R0.5070.24
5_L217_I0.5070.24
159_D312_P0.5060.24
157_P459_V0.5060.24
200_K372_K0.5060.24
106_N242_V0.5060.24
195_I497_K0.5050.24
295_A378_V0.5050.24
359_A434_K0.5040.24
121_S357_T0.5040.24
42_L191_K0.5030.24
161_Q513_E0.5030.24
20_R139_F0.5030.24
249_V486_S0.5020.24
199_I376_D0.5010.24
233_V456_T0.5010.24
7_K446_R0.5000.24
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
2djpA 1 0.1171 99.2 0.882 Contact Map
2mkxA 1 0.0929 99.2 0.885 Contact Map
2mpwA 1 0.1338 99.1 0.886 Contact Map
4pxvA 1 0.0892 99.1 0.89 Contact Map
1e0gA 1 0.0892 98.9 0.896 Contact Map
4uz3A 1 0.0892 98.8 0.9 Contact Map
4b8vA 2 0.1004 98.8 0.901 Contact Map
2l9yA 1 0.1933 98.8 0.901 Contact Map
2ltfA 1 0.0892 98.7 0.904 Contact Map
4xcmA 2 0.158 98.6 0.906 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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