VATB - SULSO - GREMLIN Contacts

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VATB - V-type ATP synthase beta chain

UniProt:	Q9UWW8	Sequences: MLSVREFSNISMIKGPLVYVQGVTDASYNELVEIEMPNGERRRGLVIDSQMGIAIVQVFEGTTGVSPTGTKIRMLGRGLEVKISEEMLGRIFNPLGDSLDNGPPVIKGEKRDINGSPLNPAAREYPEEFIQTGISAIDGLNALLRGQKLPIFSGSGLPANMLAAQIAKQATVRGEESNFAVVFAAIGARYDDALFFRKFFEETGAINRVAMIVSLANEPPVMKTLTPKTALTLAEYLAFEQDMHVLAILIDMTNYCEALREISAAREEVPGRGGYPGYMYTDLATIYERAGKVIGKKGSITQMPILTMPNDDITHPIPDLTGYITEGQIVLDRALYNKGIYPPINVLMSLSRLAKDGIGEGKTRDDHKDVSNQLFASYARAVDTRGLAAIIGEDSLSEVDRKYLLFGELFERKFVSQGFNENRSIETTLDIGWEILSVLPESELTNIKTQYIQKYHPNYRGKK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	463 (415)
Sequences:	7128 (2589)
Seq/√Len:	127.1

ECOLI - ATPB ATPA FLII RHO
BACSU - ATPA FLII ATPB RHO
HALSA - VATB VATA
SULSO - VATB VATA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
93_N	97_D	7.581	1.00
145_R	244_H	4.622	1.00
184_A	230_A	4.339	1.00
332_D	345_N	3.969	1.00
20_V	56_V	3.542	1.00
136_A	344_I	3.231	1.00
30_E	74_M	3.134	1.00
90_R	100_D	2.889	1.00
32_V	56_V	2.832	1.00
85_E	241_Q	2.806	1.00
77_R	80_E	2.670	1.00
424_S	427_T	2.648	1.00
26_A	46_V	2.607	1.00
33_E	73_R	2.555	1.00
44_G	56_V	2.555	1.00
85_E	243_M	2.533	1.00
33_E	41_R	2.497	1.00
128_E	145_R	2.496	1.00
372_N	375_F	2.488	1.00
32_V	72_I	2.485	1.00
182_V	234_A	2.457	1.00
231_L	304_P	2.384	1.00
143_L	303_M	2.299	1.00
86_E	108_G	2.243	1.00
80_E	110_K	2.192	1.00
161_M	419_F	2.184	1.00
92_F	233_L	2.177	1.00
20_V	72_I	2.149	1.00
234_A	300_I	2.141	1.00
203_T	207_N	2.113	1.00
135_S	423_R	2.103	1.00
212_I	233_L	2.070	1.00
55_I	58_V	2.058	1.00
34_I	44_G	2.037	1.00
313_I	330_V	2.014	1.00
19_Y	53_I	2.013	1.00
335_L	340_I	1.998	1.00
194_L	198_K	1.997	1.00
367_H	371_S	1.988	1.00
368_K	371_S	1.969	1.00
198_K	201_E	1.944	1.00
378_Y	381_A	1.942	1.00
180_A	243_M	1.917	1.00
10_I	65_V	1.908	1.00
111_R	115_G	1.894	1.00
27_S	30_E	1.857	1.00
102_G	201_E	1.855	1.00
373_Q	376_A	1.838	1.00
235_E	289_R	1.809	1.00
143_L	329_I	1.797	1.00
12_M	19_Y	1.792	1.00
111_R	232_T	1.752	1.00
236_Y	241_Q	1.744	1.00
198_K	202_E	1.739	1.00
111_R	236_Y	1.735	1.00
204_G	207_N	1.734	1.00
364_R	368_K	1.728	1.00
365_D	369_D	1.721	1.00
111_R	240_E	1.718	1.00
364_R	367_H	1.718	1.00
210_A	233_L	1.716	1.00
7_F	71_K	1.709	1.00
131_Q	138_D	1.706	1.00
139_G	428_T	1.699	1.00
180_A	237_L	1.697	1.00
11_S	21_Q	1.697	1.00
434_E	437_S	1.696	1.00
375_F	378_Y	1.696	1.00
340_I	416_S	1.693	1.00
180_A	210_A	1.682	1.00
197_R	211_M	1.679	1.00
139_G	414_F	1.676	1.00
30_E	76_G	1.668	1.00
338_K	411_E	1.641	1.00
371_S	410_F	1.619	1.00
128_E	292_K	1.583	1.00
306_L	321_T	1.577	1.00
6_E	74_M	1.574	1.00
364_R	371_S	1.567	1.00
33_E	43_R	1.558	1.00
340_I	411_E	1.558	1.00
401_R	405_L	1.558	1.00
405_L	408_E	1.548	1.00
35_E	41_R	1.536	1.00
385_R	388_A	1.534	1.00
182_V	233_L	1.513	1.00
35_E	71_K	1.500	1.00
82_K	110_K	1.488	1.00
142_A	354_A	1.467	1.00
92_F	212_I	1.457	1.00
364_R	375_F	1.438	1.00
368_K	372_N	1.421	1.00
375_F	381_A	1.420	1.00
154_G	157_L	1.417	1.00
81_V	233_L	1.409	1.00
150_P	325_T	1.407	1.00
90_R	102_G	1.400	1.00
32_V	44_G	1.398	1.00
20_V	23_V	1.396	1.00
90_R	103_P	1.389	1.00
244_H	299_S	1.387	1.00
85_E	236_Y	1.386	1.00
384_T	388_A	1.382	1.00
10_I	70_T	1.381	1.00
199_F	356_D	1.381	1.00
9_N	71_K	1.377	1.00
35_E	73_R	1.371	1.00
87_M	233_L	1.361	1.00
86_E	107_K	1.356	1.00
186_I	226_T	1.353	1.00
132_T	143_L	1.349	1.00
79_L	113_I	1.348	1.00
364_R	378_Y	1.346	1.00
26_A	54_A	1.337	1.00
90_R	98_S	1.336	1.00
98_S	103_P	1.335	1.00
184_A	249_L	1.331	1.00
385_R	390_I	1.329	1.00
93_N	218_E	1.308	1.00
86_E	106_I	1.305	1.00
227_P	286_I	1.302	1.00
358_I	365_D	1.288	1.00
33_E	75_L	1.287	1.00
13_I	65_V	1.283	1.00
201_E	206_I	1.282	1.00
393_E	404_L	1.278	1.00
245_V	300_I	1.267	1.00
373_Q	377_S	1.266	1.00
18_V	44_G	1.257	1.00
62_T	65_V	1.253	1.00
137_I	166_I	1.252	1.00
81_V	229_T	1.252	1.00
42_R	60_E	1.251	1.00
418_G	421_E	1.249	1.00
126_P	144_L	1.244	1.00
406_F	411_E	1.244	1.00
375_F	379_A	1.241	1.00
122_A	296_K	1.240	1.00
231_L	290_A	1.240	1.00
287_Y	324_I	1.239	1.00
315_H	318_P	1.236	1.00
91_I	197_R	1.218	0.99
259_L	282_D	1.211	0.99
43_R	97_D	1.210	0.99
132_T	303_M	1.206	0.99
202_E	205_A	1.203	0.99
371_S	375_F	1.200	0.99
367_H	370_V	1.199	0.99
185_A	193_A	1.199	0.99
109_E	240_E	1.198	0.99
427_T	431_I	1.198	0.99
26_A	32_V	1.196	0.99
77_R	110_K	1.194	0.99
11_S	53_I	1.191	0.99
413_K	416_S	1.190	0.99
167_A	209_V	1.187	0.99
242_D	297_K	1.186	0.99
353_L	357_G	1.185	0.99
141_N	329_I	1.178	0.99
140_L	374_L	1.178	0.99
283_L	321_T	1.176	0.99
368_K	375_F	1.172	0.99
88_L	180_A	1.169	0.99
253_T	257_E	1.164	0.99
115_G	240_E	1.160	0.99
379_A	382_V	1.155	0.99
21_Q	53_I	1.152	0.99
340_I	415_V	1.148	0.99
263_S	271_G	1.144	0.99
178_N	243_M	1.131	0.99
367_H	375_F	1.129	0.99
94_P	229_T	1.126	0.99
137_I	329_I	1.125	0.99
161_M	420_N	1.117	0.99
354_A	358_I	1.108	0.99
308_M	315_H	1.106	0.99
130_I	170_A	1.100	0.99
364_R	425_I	1.099	0.99
107_K	110_K	1.097	0.99
252_M	321_T	1.089	0.99
334_A	337_N	1.087	0.99
88_L	210_A	1.081	0.99
380_R	383_D	1.078	0.99
241_Q	245_V	1.078	0.99
82_K	107_K	1.076	0.99
384_T	390_I	1.070	0.99
231_L	300_I	1.064	0.99
287_Y	321_T	1.060	0.99
9_N	21_Q	1.058	0.98
405_L	409_L	1.055	0.98
387_L	390_I	1.053	0.98
134_I	137_I	1.049	0.98
184_A	247_A	1.049	0.98
384_T	389_A	1.046	0.98
97_D	104_P	1.046	0.98
109_E	236_Y	1.041	0.98
124_E	127_E	1.039	0.98
383_D	386_G	1.037	0.98
382_V	386_G	1.033	0.98
35_E	70_T	1.031	0.98
129_F	357_G	1.027	0.98
60_E	222_M	1.025	0.98
19_Y	50_Q	1.022	0.98
154_G	333_R	1.022	0.98
364_R	372_N	1.018	0.98
54_A	58_V	1.009	0.98
385_R	389_A	0.998	0.98
370_V	373_Q	0.995	0.98
143_L	301_T	0.992	0.98
311_D	333_R	0.988	0.98
131_Q	425_I	0.987	0.98
134_I	162_L	0.986	0.98
190_Y	215_L	0.981	0.98
358_I	368_K	0.979	0.97
218_E	222_M	0.978	0.97
228_K	282_D	0.976	0.97
370_V	401_R	0.970	0.97
311_D	314_T	0.969	0.97
381_A	385_R	0.969	0.97
34_I	70_T	0.967	0.97
365_D	368_K	0.963	0.97
382_V	385_R	0.962	0.97
386_G	389_A	0.961	0.97
20_V	32_V	0.959	0.97
122_A	295_G	0.958	0.97
283_L	324_I	0.954	0.97
252_M	287_Y	0.953	0.97
367_H	381_A	0.952	0.97
308_M	318_P	0.952	0.97
90_R	99_L	0.942	0.97
149_L	303_M	0.939	0.97
186_I	249_L	0.938	0.97
87_M	92_F	0.936	0.97
66_S	70_T	0.936	0.97
335_L	416_S	0.935	0.97
167_A	181_V	0.932	0.97
94_P	218_E	0.922	0.96
100_D	103_P	0.917	0.96
136_A	415_V	0.916	0.96
31_L	43_R	0.916	0.96
345_N	348_M	0.910	0.96
7_F	73_R	0.908	0.96
94_P	99_L	0.905	0.96
223_K	261_E	0.902	0.96
364_R	381_A	0.899	0.96
376_A	380_R	0.898	0.96
119_N	122_A	0.896	0.96
87_M	210_A	0.895	0.96
151_I	163_A	0.895	0.96
143_L	149_L	0.891	0.96
210_A	237_L	0.884	0.95
30_E	78_G	0.884	0.95
142_A	425_I	0.884	0.95
38_N	41_R	0.882	0.95
231_L	247_A	0.882	0.95
283_L	320_L	0.881	0.95
423_R	431_I	0.879	0.95
94_P	222_M	0.879	0.95
281_T	284_A	0.878	0.95
181_V	184_A	0.878	0.95
132_T	138_D	0.878	0.95
318_P	330_V	0.877	0.95
367_H	379_A	0.877	0.95
84_S	87_M	0.876	0.95
327_G	352_R	0.876	0.95
313_I	318_P	0.876	0.95
368_K	379_A	0.874	0.95
364_R	379_A	0.868	0.95
257_E	275_Y	0.867	0.95
154_G	311_D	0.864	0.95
365_D	375_F	0.864	0.95
30_E	138_D	0.862	0.95
365_D	371_S	0.862	0.95
154_G	319_D	0.862	0.95
35_E	39_G	0.861	0.95
182_V	210_A	0.860	0.95
238_A	245_V	0.859	0.95
376_A	381_A	0.859	0.95
339_G	372_N	0.858	0.95
58_V	62_T	0.858	0.95
383_D	389_A	0.857	0.95
171_T	244_H	0.857	0.95
167_A	248_I	0.854	0.95
17_L	266_R	0.853	0.94
406_F	437_S	0.852	0.94
79_L	225_L	0.850	0.94
205_A	209_V	0.849	0.94
178_N	244_H	0.847	0.94
230_A	247_A	0.847	0.94
377_S	381_A	0.846	0.94
31_L	75_L	0.845	0.94
189_R	192_D	0.845	0.94
257_E	309_P	0.844	0.94
180_A	245_V	0.841	0.94
197_R	201_E	0.840	0.94
337_N	348_M	0.838	0.94
384_T	387_L	0.837	0.94
186_I	227_P	0.836	0.94
124_E	295_G	0.833	0.94
385_R	403_Y	0.832	0.94
364_R	370_V	0.832	0.94
255_Y	286_I	0.831	0.94
92_F	105_V	0.829	0.94
256_C	283_L	0.827	0.94
102_G	105_V	0.826	0.93
188_A	192_D	0.825	0.93
128_E	244_H	0.824	0.93
386_G	396_L	0.823	0.93
167_A	183_F	0.822	0.93
195_F	356_D	0.821	0.93
50_Q	55_I	0.820	0.93
139_G	432_G	0.820	0.93
251_D	305_I	0.819	0.93
144_L	353_L	0.818	0.93
244_H	292_K	0.818	0.93
367_H	372_N	0.814	0.93
313_I	348_M	0.813	0.93
13_I	113_I	0.809	0.93
330_V	333_R	0.809	0.93
409_L	413_K	0.803	0.92
90_R	104_P	0.802	0.92
374_L	410_F	0.802	0.92
124_E	292_K	0.800	0.92
90_R	105_V	0.800	0.92
355_K	375_F	0.799	0.92
18_V	34_I	0.796	0.92
292_K	299_S	0.795	0.92
404_L	408_E	0.793	0.92
138_D	428_T	0.792	0.92
32_V	46_V	0.791	0.92
129_F	142_A	0.787	0.92
368_K	378_Y	0.787	0.92
60_E	97_D	0.787	0.92
83_I	232_T	0.785	0.92
17_L	55_I	0.784	0.92
246_L	303_M	0.784	0.92
367_H	378_Y	0.774	0.91
369_D	372_N	0.774	0.91
131_Q	432_G	0.772	0.91
30_E	75_L	0.770	0.91
398_E	401_R	0.769	0.91
99_L	213_V	0.769	0.91
353_L	358_I	0.768	0.91
368_K	376_A	0.766	0.91
85_E	237_L	0.765	0.91
425_I	429_L	0.761	0.90
290_A	302_Q	0.761	0.90
168_K	208_R	0.760	0.90
229_T	232_T	0.757	0.90
142_A	358_I	0.753	0.90
166_I	246_L	0.751	0.90
60_E	219_P	0.749	0.90
113_I	229_T	0.745	0.89
377_S	399_V	0.744	0.89
279_M	282_D	0.740	0.89
404_L	407_G	0.738	0.89
132_T	137_I	0.737	0.89
109_E	241_Q	0.737	0.89
20_V	44_G	0.735	0.89
255_Y	282_D	0.734	0.89
42_R	65_V	0.733	0.89
145_R	299_S	0.731	0.89
312_D	319_D	0.729	0.88
367_H	433_W	0.728	0.88
154_G	312_D	0.727	0.88
398_E	402_K	0.727	0.88
310_N	315_H	0.726	0.88
371_S	376_A	0.726	0.88
399_V	403_Y	0.725	0.88
407_G	411_E	0.725	0.88
348_M	382_V	0.721	0.88
10_I	18_V	0.720	0.88
364_R	376_A	0.719	0.88
381_A	388_A	0.718	0.88
366_D	440_P	0.717	0.88
80_E	112_D	0.717	0.88
205_A	208_R	0.717	0.88
247_A	290_A	0.716	0.87
130_I	143_L	0.715	0.87
228_K	255_Y	0.712	0.87
116_S	285_T	0.712	0.87
180_A	208_R	0.712	0.87
366_D	370_V	0.711	0.87
154_G	274_G	0.710	0.87
21_Q	52_G	0.708	0.87
152_F	318_P	0.707	0.87
245_V	261_E	0.705	0.87
32_V	54_A	0.705	0.87
49_S	68_T	0.705	0.87
93_N	99_L	0.704	0.87
249_L	286_I	0.703	0.87
125_Y	356_D	0.703	0.87
334_A	382_V	0.701	0.86
79_L	229_T	0.700	0.86
106_I	109_E	0.700	0.86
168_K	420_N	0.698	0.86
98_S	104_P	0.697	0.86
423_R	429_L	0.697	0.86
214_S	218_E	0.696	0.86
49_S	54_A	0.696	0.86
365_D	372_N	0.695	0.86
137_I	141_N	0.695	0.86
188_A	254_N	0.693	0.86
79_L	138_D	0.693	0.86
124_E	297_K	0.693	0.86
226_T	230_A	0.690	0.85
163_A	248_I	0.690	0.85
45_L	225_L	0.687	0.85
372_N	381_A	0.684	0.85
371_S	379_A	0.682	0.85
78_G	112_D	0.682	0.85
370_V	433_W	0.681	0.85
235_E	238_A	0.680	0.85
105_V	108_G	0.679	0.85
57_Q	262_I	0.678	0.84
392_G	395_S	0.677	0.84
396_L	399_V	0.673	0.84
26_A	74_M	0.672	0.84
45_L	59_F	0.670	0.84
275_Y	312_D	0.667	0.84
272_R	320_L	0.665	0.83
423_R	428_T	0.665	0.83
82_K	108_G	0.663	0.83
99_L	104_P	0.663	0.83
59_F	222_M	0.663	0.83
224_T	259_L	0.662	0.83
233_L	237_L	0.662	0.83
364_R	429_L	0.662	0.83
207_N	210_A	0.661	0.83
330_V	348_M	0.660	0.83
189_R	254_N	0.660	0.83
386_G	390_I	0.658	0.83
219_P	222_M	0.657	0.83
141_N	350_L	0.657	0.83
86_E	109_E	0.655	0.82
126_P	353_L	0.654	0.82
49_S	55_I	0.654	0.82
193_A	213_V	0.653	0.82
435_I	439_L	0.652	0.82
202_E	206_I	0.650	0.82
380_R	384_T	0.649	0.82
92_F	95_L	0.649	0.82
95_L	98_S	0.648	0.82
129_F	353_L	0.645	0.81
66_S	69_G	0.643	0.81
91_I	99_L	0.642	0.81
181_V	209_V	0.642	0.81
54_A	57_Q	0.641	0.81
102_G	206_I	0.640	0.81
397_S	400_D	0.639	0.81
90_R	101_N	0.639	0.81
437_S	440_P	0.639	0.81
332_D	348_M	0.638	0.81
402_K	409_L	0.638	0.81
224_T	262_I	0.635	0.80
131_Q	428_T	0.633	0.80
134_I	419_F	0.631	0.80
201_E	207_N	0.631	0.80
157_L	333_R	0.630	0.80
169_Q	422_N	0.629	0.80
181_V	248_I	0.629	0.80
236_Y	240_E	0.628	0.80
368_K	381_A	0.627	0.80
151_I	329_I	0.627	0.80
231_L	249_L	0.626	0.79
371_S	378_Y	0.625	0.79
319_D	322_G	0.625	0.79
227_P	249_L	0.624	0.79
22_G	26_A	0.623	0.79
112_D	232_T	0.623	0.79
88_L	206_I	0.621	0.79
367_H	429_L	0.619	0.79
135_S	431_I	0.618	0.79
144_L	352_R	0.617	0.79
141_N	344_I	0.615	0.78
223_K	235_E	0.613	0.78
372_N	376_A	0.613	0.78
256_C	317_I	0.611	0.78
431_I	434_E	0.610	0.78
430_D	434_E	0.609	0.78
109_E	112_D	0.607	0.77
371_S	381_A	0.607	0.77
354_A	371_S	0.606	0.77
371_S	380_R	0.604	0.77
248_I	305_I	0.604	0.77
88_L	243_M	0.604	0.77
31_L	79_L	0.604	0.77
163_A	305_I	0.602	0.77
99_L	218_E	0.602	0.77
41_R	73_R	0.602	0.77
129_F	425_I	0.601	0.77
155_S	324_I	0.600	0.77
314_T	321_T	0.599	0.76
27_S	66_S	0.599	0.76
257_E	320_L	0.598	0.76
373_Q	401_R	0.597	0.76
14_K	17_L	0.595	0.76
426_E	430_D	0.593	0.76
268_E	291_G	0.590	0.75
339_G	407_G	0.590	0.75
367_H	425_I	0.590	0.75
132_T	290_A	0.590	0.75
370_V	375_F	0.589	0.75
323_Y	350_L	0.588	0.75
158_P	250_I	0.588	0.75
97_D	110_K	0.586	0.75
168_K	197_R	0.586	0.75
255_Y	259_L	0.585	0.75
34_I	72_I	0.584	0.75
10_I	38_N	0.582	0.74
136_A	346_V	0.582	0.74
164_A	213_V	0.579	0.74
45_L	79_L	0.576	0.74
81_V	84_S	0.575	0.74
292_K	295_G	0.575	0.74
115_G	232_T	0.575	0.74
139_G	142_A	0.574	0.73
372_N	378_Y	0.573	0.73
75_L	78_G	0.572	0.73
383_D	388_A	0.572	0.73
132_T	170_A	0.571	0.73
365_D	370_V	0.571	0.73
378_Y	382_V	0.570	0.73
427_T	430_D	0.570	0.73
18_V	62_T	0.569	0.73
149_L	327_G	0.569	0.73
420_N	431_I	0.569	0.73
159_A	250_I	0.569	0.73
240_E	300_I	0.568	0.73
252_M	286_I	0.567	0.72
131_Q	171_T	0.567	0.72
153_S	165_Q	0.566	0.72
87_M	107_K	0.564	0.72
433_W	436_L	0.563	0.72
231_L	235_E	0.561	0.72
132_T	152_F	0.560	0.72
170_A	244_H	0.560	0.72
152_F	325_T	0.560	0.72
183_F	193_A	0.559	0.71
358_I	429_L	0.557	0.71
377_S	403_Y	0.557	0.71
180_A	241_Q	0.553	0.71
379_A	383_D	0.552	0.70
20_V	54_A	0.552	0.70
121_A	345_N	0.551	0.70
10_I	13_I	0.551	0.70
199_F	232_T	0.550	0.70
124_E	296_K	0.550	0.70
84_S	107_K	0.549	0.70
45_L	192_D	0.549	0.70
238_A	300_I	0.548	0.70
14_K	266_R	0.546	0.70
164_A	196_F	0.546	0.70
369_D	373_Q	0.544	0.69
398_E	407_G	0.541	0.69
155_S	257_E	0.541	0.69
200_F	205_A	0.541	0.69
86_E	105_V	0.540	0.69
6_E	25_D	0.540	0.69
55_I	266_R	0.537	0.68
29_N	47_I	0.537	0.68
155_S	322_G	0.537	0.68
423_R	427_T	0.535	0.68
94_P	98_S	0.533	0.68
59_F	228_K	0.530	0.67
370_V	439_L	0.528	0.67
184_A	302_Q	0.527	0.67
364_R	369_D	0.526	0.67
315_H	319_D	0.526	0.67
151_I	331_L	0.526	0.67
260_R	317_I	0.525	0.67
129_F	358_I	0.525	0.67
86_E	103_P	0.525	0.67
149_L	329_I	0.525	0.67
61_G	64_G	0.523	0.66
76_G	79_L	0.523	0.66
144_L	357_G	0.522	0.66
338_K	385_R	0.522	0.66
17_L	167_A	0.522	0.66
48_D	55_I	0.521	0.66
212_I	229_T	0.520	0.66
310_N	319_D	0.519	0.66
364_R	377_S	0.519	0.66
204_G	209_V	0.519	0.66
303_M	339_G	0.519	0.66
365_D	377_S	0.519	0.66
218_E	276_P	0.519	0.66
374_L	432_G	0.518	0.66
138_D	169_Q	0.518	0.66
414_F	431_I	0.518	0.66
355_K	419_F	0.518	0.66
370_V	374_L	0.517	0.66
418_G	422_N	0.515	0.65
201_E	209_V	0.515	0.65
98_S	105_V	0.514	0.65
104_P	108_G	0.514	0.65
365_D	379_A	0.514	0.65
112_D	115_G	0.513	0.65
155_S	323_Y	0.512	0.65
374_L	415_V	0.511	0.65
231_L	234_A	0.511	0.65
312_D	333_R	0.511	0.65
107_K	236_Y	0.510	0.64
134_I	165_Q	0.510	0.64
92_F	229_T	0.510	0.64
42_R	61_G	0.509	0.64
139_G	371_S	0.508	0.64
199_F	202_E	0.508	0.64
378_Y	388_A	0.508	0.64
160_N	250_I	0.506	0.64
19_Y	48_D	0.506	0.64
85_E	108_G	0.506	0.64
425_I	428_T	0.505	0.64
228_K	266_R	0.505	0.64
367_H	380_R	0.505	0.64
378_Y	410_F	0.503	0.63
168_K	203_T	0.502	0.63
30_E	79_L	0.502	0.63
414_F	428_T	0.502	0.63
83_I	87_M	0.502	0.63
103_P	107_K	0.501	0.63
16_P	57_Q	0.500	0.63

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2c61A	2	0.9417	100	0.096	Contact Map
3vr4D	1	0.9762	100	0.103	Contact Map
3gqbB	1	0.9784	100	0.105	Contact Map
3j9tB	1	0.9676	100	0.122	Contact Map
3oaaA	2	0.9546	100	0.122	Contact Map
2qe7A	1	0.9482	100	0.125	Contact Map
2r9vA	1	0.9611	100	0.141	Contact Map
3mfyA	1	0.8035	100	0.145	Contact Map
2ck3A	1	0.9633	100	0.146	Contact Map
1fx0A	1	0.9546	100	0.151	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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