Q980Y2 - SULSO - GREMLIN Contacts

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Q980Y2 - Primase (Carboxy-end)

UniProt:	Q980Y2	Sequences: MSKIGETPLDMGLKDAIIGIFIWNKEKGIFEPFENRLRKKARALLEYYTDLANDELKPYVISKTIIDNVVDEIKDKTLIPLPNEPLRVAFPNCTLEWKISHGRYVPSFVLAEERTPEHFAFHYIPHKIHLEELVKINEEVLSARDIPIDLIEDLARRLCPKSLEVFKQWANEKWVTLFEIIGYTLFPKIEFRKAFMILGPRGTGKSTFINLIKKLLGRGNVVNIPLHILFGDKNRFVLAELYHKLVNAVSETKEYNLDDMDTLKVLTGGDRITADVKFKDPITFTPYAKLVIASNKPPTIRDKNDMAFWHRWLIIEFPNQFEDNTAWGDKTFTEDELEGILTVSILAFSRVLLHGKFDFEQTEEEVRGIWLSTIDYVYKFVKEKLKHGEIMITKNADDYVRVKELYRMYLEYCSTNGYNATTYKGFVRRLRDYFNLTVVMKNVEGKRFRAVVGIKINTVQTNETTGGDYGEFLNYILKNNHMIKEFADLVRDFGSTEKANVFIDFCTKKNMCFSRGIDAWEISIQPRGFSFL	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	532 (412)
Sequences:	1157 (966)
Seq/√Len:	47.6

HALSA - Q9HSI4
SULSO - Q980Y2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
380_F	408_M	4.058	1.00
327_W	332_F	3.906	1.00
178_F	343_V	3.892	1.00
62_S	67_D	3.647	1.00
124_I	133_L	3.548	1.00
134_V	140_V	3.510	1.00
180_I	195_F	3.411	1.00
125_P	140_V	3.348	1.00
179_E	350_R	3.283	1.00
121_F	341_L	3.258	1.00
236_F	277_K	3.212	1.00
62_S	65_I	3.075	1.00
202_G	310_H	3.030	1.00
159_C	340_I	2.872	1.00
274_A	284_F	2.864	1.00
192_R	310_H	2.842	1.00
235_R	275_D	2.832	1.00
120_A	136_I	2.777	1.00
361_Q	365_E	2.714	1.00
179_E	354_H	2.699	1.00
181_I	344_S	2.627	1.00
178_F	347_A	2.584	1.00
167_K	177_L	2.584	1.00
92_N	96_E	2.541	1.00
343_V	347_A	2.489	1.00
236_F	275_D	2.484	1.00
156_R	160_P	2.434	1.00
307_A	310_H	2.410	1.00
406_Y	426_F	2.401	1.00
179_E	358_D	2.365	1.00
167_K	174_W	2.358	1.00
342_T	345_I	2.306	1.00
239_A	282_I	2.255	1.00
156_R	339_G	2.221	1.00
196_M	294_S	2.213	1.00
409_Y	421_T	2.204	1.00
181_I	212_I	2.201	1.00
185_L	344_S	2.198	1.00
182_G	347_A	2.193	1.00
168_Q	174_W	2.150	1.00
409_Y	413_C	2.123	1.00
194_A	263_L	2.119	1.00
338_E	342_T	2.080	1.00
123_Y	133_L	2.063	1.00
180_I	291_V	2.061	1.00
125_P	142_S	2.055	1.00
184_T	291_V	2.050	1.00
192_R	268_G	2.048	1.00
175_V	350_R	2.041	1.00
48_Y	138_E	2.024	0.99
427_V	451_V	1.970	0.99
209_I	293_A	1.938	0.99
181_I	208_F	1.926	0.99
183_Y	289_K	1.910	0.99
201_R	310_H	1.898	0.99
276_V	282_I	1.887	0.99
123_Y	150_L	1.881	0.99
64_T	145_D	1.841	0.99
127_K	130_L	1.832	0.99
170_A	362_T	1.832	0.99
159_C	211_L	1.817	0.99
192_R	202_G	1.805	0.99
127_K	134_V	1.787	0.99
122_H	149_D	1.768	0.99
309_W	371_L	1.753	0.99
193_K	313_L	1.750	0.98
157_R	336_E	1.739	0.98
215_L	337_L	1.737	0.98
386_K	455_K	1.731	0.98
236_F	278_F	1.686	0.98
173_K	316_E	1.682	0.98
350_R	354_H	1.657	0.98
91_P	97_W	1.654	0.98
210_N	330_K	1.651	0.98
222_V	247_N	1.642	0.98
151_I	338_E	1.628	0.98
399_Y	450_A	1.625	0.98
427_V	431_R	1.610	0.97
165_V	325_T	1.604	0.97
177_L	208_F	1.600	0.97
168_Q	319_N	1.593	0.97
235_R	278_F	1.591	0.97
395_N	398_D	1.584	0.97
194_A	267_T	1.577	0.97
229_L	266_L	1.572	0.97
271_R	283_T	1.568	0.97
196_M	312_W	1.563	0.97
159_C	343_V	1.554	0.97
383_E	412_Y	1.554	0.97
151_I	154_L	1.546	0.97
348_F	352_L	1.535	0.97
159_C	178_F	1.528	0.96
297_P	314_I	1.516	0.96
186_F	289_K	1.515	0.96
336_E	339_G	1.515	0.96
202_G	326_A	1.502	0.96
246_V	291_V	1.499	0.96
61_I	64_T	1.494	0.96
424_K	428_R	1.491	0.96
271_R	285_T	1.480	0.96
235_R	277_K	1.478	0.96
178_F	350_R	1.453	0.95
88_V	96_E	1.452	0.95
361_Q	364_E	1.441	0.95
376_Y	409_Y	1.439	0.95
161_K	165_V	1.435	0.95
157_R	339_G	1.432	0.95
195_F	315_I	1.430	0.95
253_K	259_D	1.424	0.95
214_K	337_L	1.416	0.95
187_P	245_L	1.413	0.94
304_N	307_A	1.412	0.94
322_E	326_A	1.398	0.94
305_D	320_Q	1.391	0.94
336_E	340_I	1.387	0.94
158_L	165_V	1.373	0.94
405_L	426_F	1.373	0.94
439_V	452_V	1.364	0.93
166_F	321_F	1.361	0.93
191_F	351_V	1.352	0.93
381_V	385_L	1.345	0.93
119_F	146_I	1.316	0.92
409_Y	426_F	1.315	0.92
149_D	338_E	1.307	0.92
197_I	317_F	1.303	0.92
251_E	258_D	1.303	0.92
126_H	131_E	1.302	0.92
61_I	136_I	1.285	0.91
300_I	308_F	1.270	0.91
412_Y	416_N	1.265	0.90
438_V	449_R	1.265	0.90
136_I	145_D	1.253	0.90
178_F	340_I	1.246	0.90
184_T	289_K	1.246	0.90
224_I	247_N	1.243	0.90
247_N	292_I	1.226	0.89
406_Y	409_Y	1.225	0.89
159_C	208_F	1.222	0.89
384_K	408_M	1.217	0.89
275_D	278_F	1.204	0.88
385_L	405_L	1.199	0.88
234_N	277_K	1.197	0.88
151_I	342_T	1.192	0.88
206_S	310_H	1.192	0.88
37_L	85_P	1.188	0.87
148_I	338_E	1.184	0.87
186_F	189_I	1.178	0.87
192_R	269_G	1.173	0.87
203_T	321_F	1.169	0.86
347_A	350_R	1.168	0.86
215_L	344_S	1.166	0.86
300_I	309_W	1.160	0.86
154_L	339_G	1.152	0.86
120_A	145_D	1.148	0.85
350_R	358_D	1.148	0.85
160_P	343_V	1.145	0.85
202_G	206_S	1.145	0.85
214_K	334_E	1.142	0.85
183_Y	191_F	1.141	0.85
166_F	317_F	1.139	0.85
313_L	359_F	1.139	0.85
201_R	307_A	1.137	0.85
241_L	247_N	1.135	0.85
242_Y	282_I	1.134	0.85
150_L	154_L	1.134	0.85
91_P	100_S	1.133	0.85
123_Y	149_D	1.131	0.85
239_A	276_V	1.123	0.84
413_C	420_A	1.121	0.84
322_E	325_T	1.120	0.84
158_L	332_F	1.117	0.84
197_I	315_I	1.114	0.84
206_S	210_N	1.111	0.84
376_Y	413_C	1.106	0.83
238_L	274_A	1.102	0.83
216_L	246_V	1.101	0.83
222_V	244_K	1.101	0.83
360_E	363_E	1.098	0.83
379_K	412_Y	1.097	0.83
164_E	174_W	1.096	0.83
159_C	336_E	1.094	0.83
236_F	280_D	1.094	0.83
175_V	179_E	1.094	0.83
234_N	275_D	1.089	0.82
439_V	449_R	1.088	0.82
321_F	326_A	1.085	0.82
194_A	312_W	1.073	0.81
84_E	98_K	1.073	0.81
173_K	360_E	1.070	0.81
302_D	308_F	1.065	0.81
120_A	142_S	1.062	0.81
192_R	307_A	1.060	0.81
329_D	332_F	1.057	0.80
156_R	336_E	1.052	0.80
117_E	129_H	1.046	0.80
173_K	315_I	1.045	0.80
406_Y	410_L	1.039	0.79
211_L	340_I	1.035	0.79
254_E	296_K	1.033	0.79
96_E	99_I	1.015	0.78
74_K	78_L	1.011	0.77
339_G	342_T	1.010	0.77
122_H	147_P	1.008	0.77
408_M	456_I	1.001	0.77
359_F	364_E	1.001	0.77
240_E	283_T	0.999	0.76
42_R	46_E	0.997	0.76
249_V	292_I	0.994	0.76
157_R	340_I	0.994	0.76
238_L	275_D	0.992	0.76
200_P	203_T	0.988	0.76
162_S	166_F	0.987	0.76
196_M	297_P	0.986	0.75
346_L	350_R	0.978	0.75
154_L	342_T	0.974	0.75
397_D	453_G	0.971	0.74
228_I	237_V	0.970	0.74
61_I	138_E	0.952	0.73
87_R	90_F	0.952	0.73
127_K	132_E	0.950	0.73
342_T	346_L	0.949	0.73
238_L	284_F	0.946	0.72
206_S	270_D	0.946	0.72
121_F	148_I	0.941	0.72
250_S	270_D	0.938	0.72
240_E	273_T	0.933	0.71
351_V	357_F	0.931	0.71
409_Y	420_A	0.930	0.71
405_L	454_I	0.930	0.71
234_N	278_F	0.929	0.71
34_E	37_L	0.929	0.71
186_F	348_F	0.922	0.70
150_L	345_I	0.917	0.70
260_M	302_D	0.916	0.70
442_N	447_R	0.915	0.70
189_I	288_A	0.913	0.70
200_P	432_D	0.906	0.69
133_L	150_L	0.906	0.69
186_F	351_V	0.904	0.69
320_Q	326_A	0.893	0.68
127_K	131_E	0.892	0.68
66_I	137_N	0.888	0.68
441_K	447_R	0.887	0.67
372_S	382_K	0.886	0.67
236_F	281_P	0.877	0.67
229_L	290_L	0.872	0.66
242_Y	284_F	0.870	0.66
273_T	283_T	0.866	0.66
150_L	342_T	0.866	0.66
263_L	267_T	0.863	0.65
194_A	292_I	0.855	0.65
206_S	264_K	0.852	0.64
131_E	349_S	0.851	0.64
167_K	173_K	0.850	0.64
197_I	293_A	0.845	0.64
380_F	400_V	0.836	0.63
340_I	343_V	0.836	0.63
429_R	432_D	0.834	0.63
395_N	455_K	0.834	0.63
192_R	336_E	0.832	0.62
176_T	313_L	0.832	0.62
440_M	447_R	0.831	0.62
410_L	417_G	0.831	0.62
247_N	290_L	0.830	0.62
252_T	294_S	0.827	0.62
172_E	361_Q	0.826	0.62
332_F	335_D	0.823	0.62
184_T	246_V	0.822	0.61
252_T	292_I	0.821	0.61
240_E	281_P	0.821	0.61
120_A	144_R	0.819	0.61
118_H	125_P	0.817	0.61
126_H	185_L	0.817	0.61
93_C	98_K	0.817	0.61
118_H	127_K	0.816	0.61
163_L	174_W	0.815	0.61
424_K	427_V	0.811	0.60
399_Y	447_R	0.811	0.60
440_M	449_R	0.809	0.60
274_A	286_P	0.808	0.60
176_T	363_E	0.807	0.60
316_E	370_W	0.804	0.60
318_P	362_T	0.804	0.60
431_R	438_V	0.802	0.60
115_T	129_H	0.801	0.59
65_I	145_D	0.801	0.59
85_P	94_T	0.800	0.59
88_V	93_C	0.800	0.59
349_S	353_L	0.799	0.59
276_V	280_D	0.798	0.59
120_A	125_P	0.793	0.59
173_K	363_E	0.793	0.59
122_H	145_D	0.790	0.58
253_K	261_D	0.787	0.58
405_L	453_G	0.786	0.58
202_G	321_F	0.785	0.58
155_A	160_P	0.784	0.58
273_T	281_P	0.783	0.58
425_G	429_R	0.782	0.58
178_F	346_L	0.778	0.57
209_I	246_V	0.776	0.57
118_H	134_V	0.775	0.57
197_I	208_F	0.772	0.57
323_D	326_A	0.771	0.57
165_V	321_F	0.769	0.56
373_T	428_R	0.769	0.56
341_L	345_I	0.768	0.56
75_D	79_I	0.768	0.56
250_S	268_G	0.767	0.56
449_R	452_V	0.766	0.56
327_W	333_T	0.765	0.56
385_L	454_I	0.764	0.56
403_K	423_Y	0.764	0.56
166_F	203_T	0.763	0.56
164_E	171_N	0.760	0.55
241_L	284_F	0.758	0.55
320_Q	323_D	0.756	0.55
162_S	208_F	0.756	0.55
95_L	98_K	0.751	0.55
118_H	140_V	0.750	0.54
148_I	341_L	0.748	0.54
348_F	351_V	0.748	0.54
164_E	169_W	0.748	0.54
85_P	98_K	0.746	0.54
343_V	346_L	0.744	0.54
78_L	94_T	0.744	0.54
183_Y	357_F	0.743	0.54
227_H	251_E	0.742	0.54
143_A	370_W	0.742	0.54
182_G	344_S	0.740	0.53
180_I	315_I	0.740	0.53
375_D	429_R	0.739	0.53
205_K	311_R	0.738	0.53
82_P	98_K	0.737	0.53
176_T	360_E	0.736	0.53
94_T	98_K	0.734	0.53
395_N	453_G	0.732	0.53
66_I	125_P	0.732	0.53
408_M	412_Y	0.731	0.53
179_E	359_F	0.727	0.52
122_H	146_I	0.724	0.52
192_R	201_R	0.723	0.52
97_W	100_S	0.723	0.52
235_R	281_P	0.722	0.52
272_I	284_F	0.722	0.52
363_E	367_R	0.719	0.51
123_Y	152_E	0.718	0.51
386_K	457_N	0.717	0.51
107_S	112_E	0.715	0.51
377_V	421_T	0.712	0.51
402_V	427_V	0.712	0.51
90_F	93_C	0.711	0.51
318_P	456_I	0.709	0.50
66_I	141_L	0.708	0.50
93_C	119_F	0.705	0.50
61_I	142_S	0.704	0.50
402_V	438_V	0.704	0.50
84_E	87_R	0.702	0.50
210_N	271_R	0.702	0.50
333_T	340_I	0.701	0.50
30_F	43_A	0.699	0.49
435_N	440_M	0.698	0.49
375_D	378_Y	0.698	0.49
195_F	291_V	0.695	0.49
239_A	275_D	0.694	0.49
95_L	99_I	0.691	0.49
376_Y	421_T	0.690	0.48
266_L	286_P	0.689	0.48
203_T	363_E	0.689	0.48
250_S	293_A	0.688	0.48
30_F	33_F	0.687	0.48
275_D	279_K	0.683	0.48
260_M	275_D	0.683	0.48
345_I	348_F	0.681	0.48
387_H	395_N	0.680	0.47
131_E	348_F	0.679	0.47
380_F	384_K	0.678	0.47
118_H	142_S	0.675	0.47
187_P	247_N	0.674	0.47
227_H	261_D	0.674	0.47
437_T	452_V	0.673	0.47
201_R	217_G	0.671	0.47
159_C	347_A	0.671	0.47
334_E	337_L	0.668	0.46
34_E	94_T	0.667	0.46
226_L	252_T	0.666	0.46
399_Y	455_K	0.666	0.46
354_H	358_D	0.666	0.46
264_K	295_N	0.666	0.46
178_F	182_G	0.664	0.46
147_P	214_K	0.661	0.46
248_A	270_D	0.660	0.46
430_L	436_L	0.658	0.45
225_P	265_V	0.658	0.45
365_E	368_G	0.657	0.45
185_L	348_F	0.657	0.45
188_K	289_K	0.654	0.45
398_D	455_K	0.653	0.45
119_F	348_F	0.651	0.45
334_E	340_I	0.651	0.45
209_I	248_A	0.648	0.44
171_N	175_V	0.647	0.44
189_I	286_P	0.646	0.44
75_D	95_L	0.646	0.44
152_E	345_I	0.645	0.44
206_S	209_I	0.643	0.44
379_K	416_N	0.643	0.44
88_V	92_N	0.643	0.44
126_H	348_F	0.640	0.44
286_P	292_I	0.639	0.43
404_E	407_R	0.639	0.43
310_H	320_Q	0.637	0.43
277_K	280_D	0.636	0.43
148_I	344_S	0.636	0.43
229_L	258_D	0.634	0.43
375_D	433_Y	0.633	0.43
397_D	441_K	0.630	0.43
430_L	437_T	0.627	0.42
238_L	272_I	0.626	0.42
201_R	309_W	0.626	0.42
53_N	72_E	0.624	0.42
166_F	319_N	0.623	0.42
187_P	360_E	0.623	0.42
117_E	127_K	0.623	0.42
76_K	169_W	0.623	0.42
312_W	370_W	0.622	0.42
206_S	269_G	0.622	0.42
172_E	362_T	0.621	0.42
34_E	93_C	0.619	0.41
66_I	258_D	0.619	0.41
206_S	304_N	0.618	0.41
135_K	263_L	0.617	0.41
400_V	404_E	0.617	0.41
288_A	292_I	0.615	0.41
162_S	336_E	0.615	0.41
209_I	291_V	0.613	0.41
57_K	68_N	0.611	0.41
144_R	377_V	0.611	0.41
66_I	140_V	0.607	0.40
205_K	295_N	0.605	0.40
123_Y	136_I	0.604	0.40
117_E	352_L	0.604	0.40
182_G	186_F	0.602	0.40
294_S	298_P	0.601	0.40
421_T	429_R	0.599	0.40
229_L	237_V	0.597	0.39
380_F	405_L	0.595	0.39
165_V	319_N	0.590	0.39
449_R	456_I	0.590	0.39
345_I	349_S	0.589	0.39
381_V	435_N	0.589	0.39
300_I	305_D	0.588	0.39
119_F	126_H	0.588	0.39
156_R	343_V	0.587	0.38
399_Y	452_V	0.587	0.38
176_T	180_I	0.587	0.38
274_A	282_I	0.587	0.38
82_P	95_L	0.586	0.38
119_F	128_I	0.583	0.38
52_A	55_E	0.583	0.38
387_H	454_I	0.583	0.38
89_A	92_N	0.582	0.38
423_Y	427_V	0.582	0.38
89_A	93_C	0.582	0.38
162_S	207_T	0.582	0.38
180_I	313_L	0.580	0.38
268_G	271_R	0.580	0.38
77_T	81_L	0.579	0.38
381_V	436_L	0.578	0.38
226_L	277_K	0.577	0.37
162_S	333_T	0.577	0.37
261_D	279_K	0.577	0.37
214_K	397_D	0.576	0.37
236_F	276_V	0.576	0.37
411_E	414_S	0.576	0.37
419_N	422_T	0.575	0.37
37_L	40_K	0.575	0.37
137_N	140_V	0.574	0.37
145_D	383_E	0.574	0.37
378_Y	433_Y	0.572	0.37
407_R	411_E	0.572	0.37
134_V	137_N	0.572	0.37
316_E	366_V	0.571	0.37
310_H	321_F	0.571	0.37
52_A	107_S	0.569	0.37
258_D	290_L	0.567	0.37
93_C	97_W	0.566	0.36
260_M	307_A	0.565	0.36
180_I	289_K	0.565	0.36
175_V	354_H	0.564	0.36
192_R	239_A	0.563	0.36
81_L	377_V	0.562	0.36
237_V	281_P	0.561	0.36
438_V	441_K	0.560	0.36
202_G	320_Q	0.560	0.36
165_V	269_G	0.560	0.36
184_T	209_I	0.560	0.36
321_F	325_T	0.560	0.36
386_K	399_Y	0.559	0.36
156_R	340_I	0.559	0.36
197_I	291_V	0.559	0.36
338_E	345_I	0.559	0.36
181_I	218_R	0.559	0.36
176_T	179_E	0.559	0.36
61_I	65_I	0.558	0.36
121_F	345_I	0.557	0.36
192_R	326_A	0.557	0.36
170_A	173_K	0.557	0.36
168_Q	173_K	0.556	0.36
251_E	294_S	0.556	0.36
403_K	420_A	0.555	0.35
369_I	373_T	0.555	0.35
264_K	302_D	0.555	0.35
71_D	272_I	0.555	0.35
301_R	314_I	0.555	0.35
407_R	415_T	0.554	0.35
401_R	404_E	0.554	0.35
442_N	458_T	0.552	0.35
157_R	161_K	0.552	0.35
39_K	92_N	0.552	0.35
129_H	364_E	0.551	0.35
267_T	270_D	0.551	0.35
31_E	36_R	0.551	0.35
260_M	304_N	0.550	0.35
158_L	336_E	0.550	0.35
229_L	289_K	0.550	0.35
76_K	79_I	0.549	0.35
183_Y	290_L	0.549	0.35
327_W	330_K	0.548	0.35
48_Y	382_K	0.547	0.35
150_L	431_R	0.545	0.35
192_R	267_T	0.544	0.34
185_L	287_Y	0.543	0.34
121_F	149_D	0.542	0.34
84_E	100_S	0.542	0.34
223_N	247_N	0.542	0.34
82_P	101_H	0.541	0.34
254_E	294_S	0.540	0.34
195_F	313_L	0.540	0.34
314_I	367_R	0.539	0.34
276_V	279_K	0.538	0.34
66_I	142_S	0.538	0.34
341_L	360_E	0.538	0.34
297_P	369_I	0.537	0.34
82_P	86_L	0.537	0.34
229_L	292_I	0.536	0.34
213_K	271_R	0.536	0.34
120_A	219_G	0.535	0.34
112_E	141_L	0.535	0.34
113_E	245_L	0.535	0.34
112_E	206_S	0.535	0.34
173_K	362_T	0.533	0.33
159_C	412_Y	0.533	0.33
247_N	286_P	0.533	0.33
121_F	133_L	0.532	0.33
179_E	347_A	0.531	0.33
121_F	126_H	0.531	0.33
136_I	142_S	0.528	0.33
363_E	370_W	0.528	0.33
159_C	163_L	0.528	0.33
149_D	337_L	0.528	0.33
285_T	353_L	0.528	0.33
121_F	124_I	0.526	0.33
203_T	316_E	0.526	0.33
146_I	184_T	0.525	0.33
122_H	150_L	0.524	0.33
268_G	288_A	0.523	0.33
180_I	184_T	0.522	0.32
175_V	272_I	0.521	0.32
242_Y	274_A	0.521	0.32
275_D	282_I	0.520	0.32
197_I	409_Y	0.520	0.32
385_L	453_G	0.520	0.32
111_A	141_L	0.520	0.32
447_R	450_A	0.520	0.32
304_N	308_F	0.519	0.32
37_L	94_T	0.518	0.32
247_N	288_A	0.518	0.32
123_Y	151_I	0.518	0.32
422_T	431_R	0.517	0.32
45_L	253_K	0.517	0.32
209_I	284_F	0.516	0.32
130_L	345_I	0.516	0.32
126_H	133_L	0.515	0.32
204_G	311_R	0.514	0.32
107_S	383_E	0.514	0.32
162_S	183_Y	0.513	0.32
277_K	288_A	0.511	0.32
165_V	346_L	0.510	0.31
341_L	347_A	0.510	0.31
348_F	380_F	0.510	0.31
107_S	397_D	0.509	0.31
224_I	234_N	0.509	0.31
263_L	376_Y	0.509	0.31
274_A	370_W	0.509	0.31
300_I	312_W	0.509	0.31
310_H	375_D	0.509	0.31
158_L	321_F	0.509	0.31
213_K	223_N	0.509	0.31
379_K	383_E	0.509	0.31
123_Y	342_T	0.507	0.31
72_E	79_I	0.507	0.31
424_K	456_I	0.507	0.31
316_E	417_G	0.506	0.31
74_K	79_I	0.506	0.31
65_I	218_R	0.506	0.31
251_E	293_A	0.506	0.31
302_D	374_I	0.505	0.31
185_L	341_L	0.503	0.31
333_T	385_L	0.502	0.31
298_P	370_W	0.501	0.31
225_P	273_T	0.501	0.31
250_S	265_V	0.501	0.31
179_E	344_S	0.501	0.31
298_P	312_W	0.501	0.31
163_L	173_K	0.501	0.31
217_G	342_T	0.501	0.31
128_I	345_I	0.500	0.31

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1u0jA	1	0.4643	99.4	0.873	Contact Map
1tueA	1	0.3571	98.8	0.902	Contact Map
1dp7P	1	0.141	98.4	0.915	Contact Map
2qbyA	1	0.5395	98.3	0.918	Contact Map
4qhsA	3	0.4041	98.2	0.919	Contact Map
2v1uA	1	0.5677	98.2	0.92	Contact Map
1um8A	1	0.4586	98.1	0.922	Contact Map
4qosA	1	0.4135	98.1	0.922	Contact Map
3hwsA	3	0.4756	97.9	0.926	Contact Map
2p65A	1	0.2857	97.7	0.928	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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