AROA - SULSO - GREMLIN Contacts

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AROA - 3-phosphoshikimate 1-carboxyvinyltransferase

UniProt:	Q980I5	Sequences: MIVKIYPSKISGIIKAPQSKSLAIRLIFLSLFTRVYLHNLVLSEDVIDAIKSVRALGVKVKNNSEFIPPEKLEIKERFIKLKGSATTLRMLIPILAAIGGEVTIDADESLRRRPLNRIVQALSNYGISFSSYSLPLTITGKLSSNEIKISGDESSQYISGLIYALHILNGGSIEILPPISSKSYILLTIDLFKRFGSDVKFYGSKIHVNPNNLVEFQGEVAGDYGLASFYALSALVSGGGITITNLWEPKEYFGDHSIVKIFSEMGASSEYKDGRWFVKAKDKYSPIKIDIDDAPDLAMTIAGLSAIAEGTSEIIGIERLRIKESDRIESIRKILGLYGVGSEVKYNSILIFGINKGMLNSPVTDCLNDHRVAMMSSALALVNGGVITSAECVGKSNPNYWQDLLSLNAKISIE	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	414 (387)
Sequences:	7885 (4795)
Seq/√Len:	243.7

ECOLI - AROA MURA
BACSU - MURA1 MURA2 AROA
HALSA - AROA
SULSO - AROA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
240_G	277_F	4.350	1.00
13_I	244_T	4.092	1.00
341_G	352_F	3.850	1.00
38_H	217_Q	3.574	1.00
242_T	277_F	3.414	1.00
240_G	279_K	3.383	1.00
399_N	402_Q	3.113	1.00
171_G	209_N	3.100	1.00
38_H	219_E	2.980	1.00
198_D	209_N	2.837	1.00
15_K	244_T	2.796	1.00
235_L	267_A	2.706	1.00
397_N	403_D	2.680	1.00
192_F	197_S	2.660	1.00
105_D	111_R	2.642	1.00
36_Y	217_Q	2.630	1.00
128_S	139_T	2.607	1.00
311_T	352_F	2.581	1.00
363_V	388_T	2.508	1.00
236_V	378_A	2.491	1.00
283_K	309_E	2.451	1.00
268_S	279_K	2.444	1.00
334_I	337_L	2.407	1.00
42_L	47_I	2.402	1.00
51_K	54_R	2.329	1.00
232_L	304_L	2.312	1.00
241_I	407_L	2.311	1.00
272_K	275_R	2.296	1.00
154_S	157_Y	2.176	1.00
345_K	348_S	2.141	1.00
121_A	161_L	2.118	1.00
380_A	386_V	2.076	1.00
101_E	137_T	2.073	1.00
42_L	62_N	2.060	1.00
162_I	189_I	2.029	1.00
307_I	382_V	2.029	1.00
36_Y	66_F	2.018	1.00
288_K	315_I	1.989	1.00
171_G	207_H	1.988	1.00
11_S	240_G	1.981	1.00
354_I	357_G	1.973	1.00
358_M	384_G	1.971	1.00
334_I	376_S	1.950	1.00
313_E	350_L	1.926	1.00
30_S	35_V	1.897	1.00
61_K	68_P	1.896	1.00
23_A	40_L	1.887	1.00
335_L	340_V	1.802	1.00
116_N	120_Q	1.801	1.00
28_F	49_A	1.773	1.00
36_Y	68_P	1.771	1.00
38_H	66_F	1.770	1.00
248_E	274_G	1.769	1.00
242_T	275_R	1.759	1.00
144_S	168_L	1.756	1.00
242_T	272_K	1.734	1.00
285_S	309_E	1.733	1.00
134_L	140_G	1.732	1.00
93_P	160_G	1.718	1.00
303_G	375_M	1.697	1.00
197_S	213_L	1.694	1.00
143_S	169_N	1.676	1.00
334_I	367_L	1.659	1.00
52_S	79_I	1.653	1.00
343_E	352_F	1.653	1.00
26_L	191_L	1.635	1.00
311_T	350_L	1.634	1.00
338_Y	386_V	1.634	1.00
338_Y	362_P	1.624	1.00
343_E	350_L	1.621	1.00
120_Q	124_N	1.618	1.00
270_E	277_F	1.609	1.00
130_S	139_T	1.598	1.00
228_S	297_L	1.595	1.00
59_K	70_E	1.593	1.00
50_I	60_V	1.552	1.00
340_V	359_L	1.522	1.00
13_I	242_T	1.496	1.00
329_E	344_V	1.486	1.00
288_K	313_E	1.485	1.00
404_L	409_A	1.484	1.00
193_K	202_Y	1.483	1.00
200_K	209_N	1.475	1.00
272_K	277_F	1.465	1.00
231_A	259_V	1.463	1.00
377_S	400_Y	1.457	1.00
27_I	53_V	1.446	1.00
364_T	376_S	1.442	1.00
111_R	133_S	1.426	1.00
202_Y	206_I	1.418	1.00
130_S	137_T	1.417	1.00
146_E	172_S	1.411	1.00
260_K	263_S	1.405	1.00
78_F	103_T	1.403	1.00
109_S	112_R	1.389	1.00
403_D	406_S	1.377	1.00
54_R	60_V	1.376	1.00
63_N	68_P	1.373	1.00
338_Y	379_L	1.358	1.00
148_K	176_L	1.358	1.00
306_A	340_V	1.353	1.00
247_W	250_K	1.353	1.00
100_G	139_T	1.342	1.00
286_P	312_S	1.339	1.00
221_A	251_E	1.338	1.00
233_S	381_L	1.333	1.00
310_G	353_G	1.325	1.00
326_D	329_E	1.321	1.00
195_F	216_F	1.321	1.00
286_P	311_T	1.320	1.00
231_A	243_I	1.318	1.00
305_S	312_S	1.315	1.00
329_E	333_K	1.312	1.00
187_L	218_G	1.310	1.00
227_A	246_L	1.300	1.00
37_L	220_V	1.296	1.00
47_I	62_N	1.296	1.00
127_I	142_L	1.294	1.00
119_V	131_S	1.293	1.00
26_L	220_V	1.292	1.00
135_P	138_I	1.289	1.00
89_R	159_S	1.287	1.00
302_A	314_I	1.286	1.00
132_Y	137_T	1.282	1.00
146_E	177_P	1.275	1.00
232_L	258_I	1.271	1.00
51_K	55_A	1.262	1.00
16_A	243_I	1.257	1.00
27_I	50_I	1.252	1.00
231_A	262_F	1.244	1.00
189_I	199_V	1.241	1.00
61_K	70_E	1.234	1.00
40_L	46_V	1.231	1.00
194_R	216_F	1.221	1.00
193_K	198_D	1.216	1.00
262_F	267_A	1.211	1.00
84_S	87_T	1.210	1.00
270_E	279_K	1.210	1.00
162_I	208_V	1.209	1.00
14_I	407_L	1.201	1.00
63_N	66_F	1.200	1.00
265_M	287_I	1.195	1.00
23_A	46_V	1.193	1.00
345_K	350_L	1.185	1.00
62_N	67_I	1.184	1.00
134_L	138_I	1.182	1.00
330_S	367_L	1.176	1.00
123_S	128_S	1.175	1.00
291_I	316_G	1.173	1.00
101_E	139_T	1.173	1.00
50_I	67_I	1.172	1.00
142_L	168_L	1.171	1.00
373_A	393_V	1.170	1.00
88_L	134_L	1.166	1.00
200_K	207_H	1.166	1.00
380_A	387_I	1.161	1.00
183_S	190_D	1.159	1.00
261_I	289_I	1.157	1.00
15_K	245_N	1.153	1.00
35_V	191_L	1.150	1.00
136_L	140_G	1.147	1.00
76_E	101_E	1.147	1.00
125_Y	145_N	1.143	1.00
231_A	278_V	1.141	1.00
230_Y	397_N	1.138	1.00
262_F	304_L	1.123	1.00
307_I	354_I	1.115	1.00
24_I	49_A	1.103	1.00
52_S	81_L	1.101	1.00
44_E	394_G	1.100	1.00
236_V	382_V	1.099	1.00
399_N	403_D	1.096	1.00
176_L	179_I	1.095	1.00
233_S	378_A	1.095	1.00
290_D	316_G	1.093	1.00
302_A	331_I	1.087	1.00
33_T	215_E	1.084	1.00
181_S	204_S	1.080	1.00
373_A	392_C	1.073	1.00
54_R	59_K	1.069	1.00
303_G	379_L	1.068	1.00
328_I	349_I	1.068	1.00
120_Q	123_S	1.067	1.00
402_Q	405_L	1.067	1.00
342_S	349_I	1.055	1.00
119_V	123_S	1.049	1.00
247_W	251_E	1.048	1.00
261_I	301_I	1.048	1.00
364_T	386_V	1.046	1.00
48_D	82_K	1.040	1.00
229_F	374_M	1.039	1.00
263_S	271_Y	1.039	1.00
12_G	407_L	1.037	1.00
169_N	212_N	1.037	1.00
235_L	282_D	1.035	1.00
100_G	137_T	1.028	1.00
311_T	353_G	1.025	1.00
35_V	216_F	1.025	1.00
265_M	308_A	1.020	1.00
244_T	275_R	1.017	1.00
149_I	161_L	1.015	1.00
48_D	51_K	1.005	1.00
331_I	372_V	1.004	1.00
228_S	300_T	1.002	1.00
248_E	271_Y	0.989	1.00
159_S	188_T	0.986	1.00
128_S	141_K	0.983	1.00
383_N	386_V	0.977	1.00
305_S	314_I	0.977	1.00
37_L	69_P	0.974	1.00
10_I	233_S	0.972	1.00
261_I	264_E	0.971	1.00
336_G	341_G	0.966	1.00
337_L	362_P	0.964	1.00
189_I	202_Y	0.962	1.00
184_Y	224_Y	0.961	1.00
232_L	297_L	0.961	1.00
226_L	403_D	0.954	1.00
224_Y	258_I	0.950	1.00
362_P	386_V	0.948	1.00
166_H	213_L	0.948	1.00
146_E	176_L	0.946	1.00
314_I	349_I	0.942	1.00
354_I	358_M	0.940	1.00
286_P	310_G	0.939	1.00
53_V	58_V	0.938	1.00
54_R	62_N	0.933	1.00
50_I	54_R	0.925	1.00
297_L	300_T	0.922	1.00
389_S	392_C	0.917	1.00
232_L	262_F	0.917	1.00
314_I	317_I	0.914	1.00
134_L	141_K	0.914	1.00
238_G	281_K	0.911	1.00
26_L	37_L	0.906	1.00
368_N	389_S	0.905	1.00
25_R	28_F	0.902	1.00
172_S	207_H	0.898	1.00
317_I	348_S	0.890	1.00
192_F	213_L	0.890	1.00
147_I	150_S	0.888	1.00
78_F	105_D	0.887	1.00
172_S	205_K	0.883	1.00
118_I	160_G	0.881	0.99
108_E	370_H	0.881	0.99
202_Y	205_K	0.878	0.99
170_G	210_P	0.878	0.99
103_T	137_T	0.876	0.99
218_G	221_A	0.876	0.99
119_V	129_F	0.875	0.99
280_A	284_Y	0.874	0.99
219_E	245_N	0.871	0.99
302_A	330_S	0.869	0.99
366_C	373_A	0.867	0.99
117_R	151_G	0.865	0.99
263_S	268_S	0.862	0.99
286_P	308_A	0.861	0.99
150_S	261_I	0.861	0.99
381_L	409_A	0.855	0.99
265_M	284_Y	0.852	0.99
284_Y	308_A	0.850	0.99
193_K	201_F	0.850	0.99
361_S	386_V	0.848	0.99
328_I	344_V	0.847	0.99
39_N	219_E	0.847	0.99
58_V	69_P	0.847	0.99
16_A	230_Y	0.846	0.99
360_N	384_G	0.845	0.99
306_A	335_L	0.844	0.99
191_L	195_F	0.843	0.99
234_A	237_S	0.837	0.99
166_H	197_S	0.833	0.99
55_A	78_F	0.833	0.99
171_G	210_P	0.828	0.99
308_A	312_S	0.823	0.99
190_D	194_R	0.823	0.99
28_F	94_I	0.819	0.99
306_A	354_I	0.818	0.99
120_Q	150_S	0.818	0.99
93_P	163_Y	0.818	0.99
95_L	127_I	0.817	0.99
194_R	218_G	0.815	0.99
193_K	199_V	0.815	0.99
10_I	239_G	0.814	0.99
302_A	349_I	0.812	0.99
81_L	110_L	0.804	0.99
233_S	409_A	0.804	0.99
231_A	234_A	0.800	0.99
267_A	284_Y	0.798	0.99
391_E	394_G	0.797	0.99
236_V	307_I	0.796	0.99
88_L	115_L	0.796	0.99
238_G	280_A	0.790	0.99
135_P	140_G	0.788	0.99
22_L	191_L	0.785	0.99
271_Y	276_W	0.781	0.99
16_A	227_A	0.779	0.99
380_A	404_L	0.777	0.99
253_F	260_K	0.775	0.99
390_A	393_V	0.774	0.99
236_V	303_G	0.772	0.99
234_A	241_I	0.771	0.99
302_A	351_I	0.771	0.99
23_A	220_V	0.771	0.99
230_Y	403_D	0.770	0.99
315_I	348_S	0.769	0.99
29_L	191_L	0.768	0.99
129_F	136_L	0.766	0.99
307_I	357_G	0.766	0.99
117_R	150_S	0.764	0.99
271_Y	275_R	0.762	0.99
32_F	94_I	0.760	0.99
50_I	62_N	0.759	0.99
300_T	378_A	0.755	0.98
265_M	304_L	0.755	0.98
258_I	297_L	0.754	0.98
164_A	168_L	0.750	0.98
39_N	245_N	0.749	0.98
110_L	324_E	0.749	0.98
209_N	212_N	0.746	0.98
190_D	193_K	0.743	0.98
22_L	187_L	0.742	0.98
34_R	214_V	0.741	0.98
191_L	216_F	0.740	0.98
26_L	218_G	0.739	0.98
361_S	383_N	0.739	0.98
265_M	305_S	0.738	0.98
227_A	243_I	0.738	0.98
193_K	200_K	0.738	0.98
340_V	357_G	0.735	0.98
377_S	393_V	0.735	0.98
344_V	348_S	0.734	0.98
72_L	98_I	0.733	0.98
134_L	137_T	0.733	0.98
54_R	61_K	0.732	0.98
17_P	226_L	0.731	0.98
81_L	104_I	0.731	0.98
44_E	48_D	0.730	0.98
31_L	53_V	0.724	0.98
333_K	367_L	0.723	0.98
92_I	138_I	0.723	0.98
338_Y	364_T	0.721	0.98
394_G	401_W	0.721	0.98
15_K	39_N	0.719	0.98
78_F	111_R	0.718	0.98
182_K	186_L	0.714	0.98
108_E	112_R	0.714	0.98
75_K	100_G	0.713	0.98
125_Y	147_I	0.713	0.98
359_L	383_N	0.712	0.98
338_Y	383_N	0.712	0.98
149_I	176_L	0.710	0.98
95_L	102_V	0.709	0.98
259_V	263_S	0.709	0.98
312_S	351_I	0.708	0.98
235_L	262_F	0.708	0.98
10_I	409_A	0.708	0.98
75_K	98_I	0.707	0.98
17_P	403_D	0.707	0.98
299_M	372_V	0.706	0.98
14_I	243_I	0.705	0.98
315_I	345_K	0.704	0.98
162_I	206_I	0.701	0.97
96_A	127_I	0.700	0.97
287_I	312_S	0.700	0.97
19_S	23_A	0.697	0.97
129_F	138_I	0.697	0.97
291_I	298_A	0.696	0.97
151_G	322_I	0.695	0.97
195_F	213_L	0.695	0.97
27_I	67_I	0.694	0.97
53_V	91_L	0.693	0.97
229_F	300_T	0.692	0.97
187_L	190_D	0.688	0.97
77_R	80_K	0.687	0.97
231_A	235_L	0.685	0.97
92_I	118_I	0.683	0.97
201_F	204_S	0.680	0.97
268_S	281_K	0.679	0.97
23_A	41_V	0.679	0.97
144_S	169_N	0.679	0.97
280_A	283_K	0.678	0.97
366_C	387_I	0.675	0.97
238_G	282_D	0.672	0.97
198_D	211_N	0.671	0.97
91_L	122_L	0.670	0.97
366_C	389_S	0.670	0.97
87_T	395_K	0.668	0.97
269_S	278_V	0.668	0.97
18_Q	220_V	0.667	0.97
31_L	58_V	0.667	0.97
235_L	278_V	0.667	0.97
77_R	111_R	0.663	0.97
103_T	132_Y	0.661	0.96
198_D	212_N	0.659	0.96
53_V	60_V	0.657	0.96
328_I	348_S	0.656	0.96
89_R	156_Q	0.652	0.96
303_G	376_S	0.651	0.96
92_I	104_I	0.650	0.96
327_R	369_D	0.647	0.96
259_V	271_Y	0.646	0.96
9_K	239_G	0.645	0.96
131_S	136_L	0.642	0.96
123_S	129_F	0.641	0.96
234_A	243_I	0.640	0.96
134_L	139_T	0.638	0.96
88_L	104_I	0.638	0.96
44_E	47_I	0.637	0.96
290_D	315_I	0.636	0.96
190_D	218_G	0.635	0.96
62_N	65_E	0.635	0.96
156_Q	185_I	0.635	0.96
122_L	127_I	0.634	0.96
269_S	276_W	0.634	0.96
291_I	294_A	0.634	0.96
235_L	284_Y	0.632	0.95
381_L	404_L	0.632	0.95
117_R	153_E	0.630	0.95
22_L	25_R	0.629	0.95
228_S	258_I	0.628	0.95
299_M	330_S	0.625	0.95
401_W	405_L	0.624	0.95
115_L	119_V	0.622	0.95
234_A	280_A	0.621	0.95
74_I	132_Y	0.618	0.95
95_L	122_L	0.618	0.95
222_G	243_I	0.617	0.95
230_Y	404_L	0.616	0.95
313_E	345_K	0.616	0.95
233_S	404_L	0.614	0.95
263_S	269_S	0.614	0.95
317_I	328_I	0.614	0.95
201_F	206_I	0.613	0.95
35_V	215_E	0.611	0.95
232_L	300_T	0.611	0.95
261_I	287_I	0.610	0.94
30_S	69_P	0.608	0.94
186_L	189_I	0.608	0.94
95_L	104_I	0.608	0.94
117_R	120_Q	0.606	0.94
366_C	392_C	0.605	0.94
104_I	136_L	0.605	0.94
14_I	403_D	0.603	0.94
81_L	87_T	0.603	0.94
377_S	401_W	0.603	0.94
393_V	401_W	0.601	0.94
113_R	371_R	0.601	0.94
197_S	211_N	0.598	0.94
25_R	89_R	0.597	0.94
123_S	131_S	0.595	0.94
303_G	306_A	0.594	0.94
234_A	239_G	0.594	0.94
81_L	88_L	0.592	0.94
338_Y	359_L	0.591	0.93
14_I	230_Y	0.590	0.93
191_L	218_G	0.590	0.93
246_L	276_W	0.590	0.93
248_E	276_W	0.588	0.93
331_I	375_M	0.586	0.93
113_R	327_R	0.586	0.93
336_G	342_S	0.585	0.93
197_S	212_N	0.585	0.93
142_L	170_G	0.584	0.93
193_K	197_S	0.582	0.93
56_L	95_L	0.582	0.93
306_A	382_V	0.581	0.93
52_S	91_L	0.581	0.93
259_V	269_S	0.576	0.93
24_I	28_F	0.574	0.92
340_V	379_L	0.574	0.92
230_Y	400_Y	0.574	0.92
175_I	206_I	0.574	0.92
47_I	51_K	0.573	0.92
237_S	280_A	0.573	0.92
261_I	294_A	0.572	0.92
237_S	381_L	0.571	0.92
136_L	139_T	0.571	0.92
286_P	309_E	0.567	0.92
66_F	69_P	0.567	0.92
390_A	401_W	0.566	0.92
165_L	192_F	0.566	0.92
303_G	335_L	0.564	0.92
24_I	87_T	0.563	0.92
74_I	101_E	0.563	0.92
337_L	376_S	0.561	0.92
231_A	269_S	0.561	0.92
333_K	336_G	0.560	0.92
97_A	167_I	0.560	0.92
368_N	392_C	0.560	0.92
373_A	401_W	0.559	0.92
286_P	353_G	0.558	0.91
142_L	164_A	0.557	0.91
374_M	400_Y	0.557	0.91
331_I	376_S	0.556	0.91
264_E	293_D	0.555	0.91
234_A	238_G	0.555	0.91
189_I	206_I	0.553	0.91
314_I	351_I	0.553	0.91
72_L	75_K	0.552	0.91
93_P	96_A	0.552	0.91
236_V	304_L	0.552	0.91
267_A	278_V	0.551	0.91
160_G	164_A	0.550	0.91
110_L	134_L	0.550	0.91
186_L	201_F	0.548	0.91
313_E	348_S	0.548	0.91
110_L	323_K	0.548	0.91
123_S	130_S	0.547	0.91
50_I	69_P	0.547	0.91
298_A	328_I	0.547	0.91
35_V	195_F	0.542	0.90
17_P	398_P	0.542	0.90
187_L	221_A	0.541	0.90
58_V	72_L	0.541	0.90
242_T	274_G	0.541	0.90
336_G	343_E	0.539	0.90
190_D	202_Y	0.537	0.90
92_I	160_G	0.536	0.90
246_L	275_R	0.535	0.90
234_A	267_A	0.535	0.90
186_L	206_I	0.534	0.90
36_Y	63_N	0.534	0.90
156_Q	159_S	0.532	0.89
305_S	351_I	0.530	0.89
225_G	370_H	0.530	0.89
330_S	372_V	0.530	0.89
149_I	206_I	0.530	0.89
337_L	367_L	0.529	0.89
287_I	308_A	0.529	0.89
165_L	170_G	0.529	0.89
298_A	314_I	0.528	0.89
29_L	213_L	0.527	0.89
20_K	113_R	0.527	0.89
118_I	121_A	0.527	0.89
248_E	275_R	0.526	0.89
135_P	141_K	0.526	0.89
192_F	195_F	0.525	0.89
56_L	75_K	0.523	0.89
74_I	100_G	0.523	0.89
52_S	90_M	0.523	0.89
283_K	357_G	0.523	0.89
42_L	67_I	0.522	0.89
341_G	357_G	0.522	0.89
316_G	324_E	0.520	0.88
40_L	67_I	0.519	0.88
124_N	147_I	0.517	0.88
83_G	107_D	0.517	0.88
33_T	195_F	0.516	0.88
302_A	342_S	0.516	0.88
19_S	221_A	0.514	0.88
402_Q	406_S	0.514	0.88
330_S	392_C	0.514	0.88
89_R	323_K	0.514	0.88
359_L	362_P	0.514	0.88
27_I	49_A	0.513	0.88
336_G	340_V	0.513	0.88
41_V	226_L	0.512	0.88
189_I	193_K	0.512	0.88
16_A	246_L	0.510	0.87
147_I	176_L	0.510	0.87
121_A	125_Y	0.510	0.87
291_I	301_I	0.509	0.87
101_E	135_P	0.508	0.87
77_R	81_L	0.507	0.87
268_S	282_D	0.507	0.87
16_A	222_G	0.505	0.87
361_S	385_G	0.504	0.87
166_H	211_N	0.504	0.87
331_I	334_I	0.503	0.87
177_P	205_K	0.503	0.87
265_M	312_S	0.503	0.87
86_T	90_M	0.502	0.87
306_A	357_G	0.502	0.87
89_R	324_E	0.502	0.87
59_K	62_N	0.502	0.87
341_G	354_I	0.501	0.86
289_I	301_I	0.501	0.86
159_S	187_L	0.501	0.86
362_P	385_G	0.500	0.86

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3rmtA	4	0.971	100	0.142	Contact Map
2pqcA	1	0.9734	100	0.174	Contact Map
2o0bA	1	0.9734	100	0.183	Contact Map
1rf6A	1	0.9638	100	0.186	Contact Map
3slhA	4	0.971	100	0.193	Contact Map
3nvsA	1	0.9783	100	0.209	Contact Map
3r38A	2	0.9565	100	0.277	Contact Map
4fqdA	2	0.9469	100	0.277	Contact Map
3zh4A	1	0.942	100	0.282	Contact Map
2yvwA	1	0.9517	100	0.299	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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