Q980G8 - SULSO - GREMLIN Contacts

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Q980G8 - NADH dehydrogenase subunit N (NuoN)

UniProt:	Q980G8	Sequences: MGYSFTFNYSFDSIRGDWIMDPMYYLPILIPSIFILFSSISVLFIDNGLDENRFRLSVILSVVLLGVSLAFLIYSWTASVINYTLFSKSLLIDVPGYFFSITVFSIGILAILLSKDHIISWPTRSSMLSLMLLSLLGLFYMSFANNIIIVLTTWAISSAASYAIAMLRKDYKSVDAGIKYLIMGLLSSSIMIIGFASYLISTGSLLFTTSVIYPNLFFFSISFISIAFLFKIGAFPFQAWLPDVYTDADRISVAFISSVGKLIGIIPLFRVVYLSDPNMVELVIFIVISVASMLVGNITAFSRRDVAAILSFSSITQMGYILIGFAMFTVSPAIAVVGILVQSLAYGIAQVGLFGIVSHVEKVSGTSDISGLRGISSQDKPLAFAIVVLILSLLGIPPIFGFWGKLFLFESSFTYPWLTIIAVLNSAISAGYYVPIVREVFREGEFEVIKSSERNIAVVSAILSIILGIVIPIVFQILVSQID	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	483 (440)
Sequences:	20091 (12461)
Seq/√Len:	594.1

ECOLI - HYFB NUOL HYCC HYFF NUOM HYFD NUON
BACSU - MRPA MRPD NDHF
HALSA - Q9HRL3 Q9HRT0 Q9HRL2 Q9HRS9 Q9HRL1 Q9HRS8
SULSO - Q980G8 Q97ZA6 Q97ZA9 Q980G9

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
93_D	270_R	4.854	1.00
352_G	389_L	4.555	1.00
140_Y	153_T	4.322	1.00
206_L	209_T	4.018	1.00
100_S	143_F	3.694	1.00
166_M	177_G	3.623	1.00
345_A	400_F	3.189	1.00
179_K	243_D	3.140	1.00
107_G	135_L	3.124	1.00
305_D	367_S	3.088	1.00
293_M	425_N	2.918	1.00
204_S	209_T	2.845	1.00
342_Q	404_G	2.835	1.00
304_R	370_S	2.788	1.00
289_S	326_A	2.665	1.00
387_V	437_V	2.645	1.00
366_T	371_G	2.591	1.00
310_L	357_V	2.582	1.00
103_V	142_S	2.580	1.00
36_L	136_L	2.574	1.00
194_G	223_F	2.480	1.00
137_G	156_I	2.478	1.00
100_S	139_F	2.463	1.00
234_A	322_L	2.433	1.00
114_S	127_M	2.411	1.00
38_S	60_L	2.383	1.00
368_D	371_G	2.364	1.00
91_L	145_N	2.265	1.00
390_I	433_Y	2.258	1.00
301_F	431_G	2.186	1.00
309_I	369_I	2.165	1.00
450_K	453_E	2.144	1.00
323_I	422_A	2.141	1.00
104_F	139_F	2.141	1.00
62_V	108_I	2.039	1.00
245_Y	253_V	1.994	1.00
245_Y	261_K	1.958	1.00
283_V	287_V	1.931	1.00
324_G	408_L	1.866	1.00
209_T	212_I	1.862	1.00
313_S	432_Y	1.862	1.00
93_D	96_G	1.832	1.00
229_L	234_A	1.830	1.00
379_D	382_L	1.817	1.00
294_L	425_N	1.817	1.00
304_R	368_D	1.777	1.00
297_N	316_T	1.775	1.00
62_V	66_G	1.768	1.00
147_I	210_S	1.763	1.00
306_V	436_I	1.750	1.00
75_S	78_A	1.742	1.00
150_V	267_P	1.727	1.00
338_G	411_S	1.723	1.00
286_I	326_A	1.720	1.00
470_V	473_I	1.710	1.00
65_L	105_S	1.695	1.00
341_V	404_G	1.693	1.00
197_S	220_S	1.687	1.00
233_G	241_L	1.673	1.00
147_I	271_V	1.661	1.00
435_P	439_E	1.652	1.00
303_R	308_A	1.640	1.00
459_V	463_L	1.640	1.00
327_M	335_A	1.622	1.00
145_N	208_T	1.621	1.00
409_F	422_A	1.618	1.00
456_I	459_V	1.610	1.00
261_K	314_S	1.606	1.00
64_L	68_S	1.604	1.00
102_T	347_G	1.586	1.00
376_S	383_A	1.580	1.00
462_I	466_I	1.579	1.00
416_P	420_I	1.577	1.00
290_V	421_I	1.568	1.00
269_F	325_F	1.567	1.00
225_S	229_L	1.562	1.00
96_G	266_I	1.562	1.00
348_I	463_L	1.559	1.00
410_E	414_T	1.551	1.00
201_S	220_S	1.539	1.00
75_S	79_S	1.538	1.00
144_A	149_I	1.530	1.00
235_F	291_A	1.521	1.00
170_D	173_S	1.519	1.00
46_D	125_S	1.492	1.00
412_S	419_T	1.491	1.00
146_N	205_L	1.489	1.00
146_N	206_L	1.485	1.00
141_M	263_I	1.459	1.00
91_L	94_V	1.456	1.00
285_F	326_A	1.453	1.00
61_S	65_L	1.443	1.00
98_F	344_L	1.427	1.00
111_I	128_L	1.409	1.00
321_I	339_I	1.405	1.00
199_L	205_L	1.398	1.00
130_L	163_A	1.396	1.00
451_S	455_N	1.395	1.00
286_I	418_L	1.394	1.00
325_F	339_I	1.393	1.00
215_N	219_F	1.378	1.00
194_G	227_A	1.363	1.00
297_N	425_N	1.360	1.00
386_I	390_I	1.355	1.00
164_I	252_S	1.354	1.00
234_A	288_I	1.350	1.00
324_G	335_A	1.348	1.00
282_L	286_I	1.348	1.00
383_A	442_R	1.346	1.00
32_S	35_I	1.336	1.00
123_T	126_S	1.331	1.00
111_I	131_M	1.327	1.00
388_V	461_A	1.326	1.00
327_M	412_S	1.324	1.00
228_F	267_P	1.322	1.00
32_S	136_L	1.320	1.00
176_A	247_D	1.316	1.00
61_S	64_L	1.315	1.00
458_V	462_I	1.311	1.00
194_G	224_I	1.301	1.00
39_S	133_L	1.300	1.00
386_I	436_I	1.298	1.00
449_I	453_E	1.293	1.00
196_A	200_I	1.292	1.00
116_D	119_I	1.288	1.00
68_S	104_F	1.281	1.00
383_A	437_V	1.275	1.00
225_S	285_F	1.275	1.00
51_E	55_R	1.270	1.00
349_A	392_S	1.262	1.00
113_L	355_G	1.261	1.00
92_I	143_F	1.253	1.00
79_S	82_N	1.251	1.00
98_F	340_L	1.249	1.00
353_L	389_L	1.241	1.00
269_F	339_I	1.239	1.00
89_S	145_N	1.233	1.00
183_M	239_A	1.233	1.00
150_V	207_F	1.233	1.00
268_L	322_L	1.229	1.00
191_M	227_A	1.227	1.00
43_L	46_D	1.226	1.00
60_L	64_L	1.218	1.00
31_P	35_I	1.212	1.00
243_D	308_A	1.211	1.00
390_I	437_V	1.211	1.00
106_I	347_G	1.207	1.00
280_V	283_V	1.202	1.00
323_I	412_S	1.192	1.00
51_E	54_F	1.192	1.00
194_G	220_S	1.191	1.00
381_P	384_F	1.186	1.00
151_L	192_I	1.183	1.00
69_L	73_I	1.181	1.00
324_G	339_I	1.179	1.00
172_K	246_T	1.173	1.00
99_F	343_S	1.169	1.00
287_V	291_A	1.164	1.00
369_I	440_V	1.160	1.00
387_V	441_F	1.155	1.00
106_I	351_V	1.152	1.00
278_N	281_E	1.146	1.00
316_T	429_S	1.144	1.00
429_S	432_Y	1.133	1.00
413_F	419_T	1.131	1.00
463_L	467_L	1.130	1.00
289_S	319_G	1.128	1.00
147_I	195_F	1.120	1.00
195_F	224_I	1.119	1.00
393_L	433_Y	1.118	1.00
104_F	108_I	1.117	1.00
356_I	386_I	1.117	1.00
145_N	206_L	1.116	1.00
295_V	299_T	1.116	1.00
134_S	138_L	1.115	1.00
66_G	70_A	1.112	1.00
148_I	205_L	1.111	1.00
31_P	67_V	1.111	1.00
338_G	407_F	1.108	1.00
461_A	464_S	1.108	1.00
407_F	410_E	1.095	1.00
230_F	237_F	1.093	1.00
345_A	404_G	1.093	1.00
235_F	295_V	1.092	1.00
197_S	216_L	1.077	1.00
329_T	335_A	1.077	1.00
391_L	396_I	1.076	1.00
296_G	319_G	1.071	1.00
356_I	457_A	1.070	1.00
382_L	448_V	1.067	1.00
229_L	288_I	1.066	1.00
420_I	424_L	1.064	1.00
187_S	230_F	1.063	1.00
106_I	258_S	1.061	1.00
461_A	465_I	1.060	1.00
451_S	454_R	1.058	1.00
133_L	160_A	1.057	1.00
361_E	367_S	1.055	1.00
191_M	195_F	1.054	1.00
232_I	265_I	1.054	1.00
389_L	461_A	1.053	1.00
175_D	179_K	1.053	1.00
105_S	109_L	1.036	1.00
460_S	464_S	1.034	1.00
67_V	71_F	1.029	1.00
373_R	446_F	1.027	1.00
95_P	269_F	1.024	1.00
108_I	112_L	1.017	1.00
76_W	79_S	1.015	1.00
202_T	210_S	1.014	1.00
213_Y	217_F	1.012	1.00
359_H	382_L	1.005	1.00
54_F	57_S	1.005	1.00
39_S	43_L	1.002	1.00
335_A	411_S	1.002	1.00
225_S	268_L	1.000	1.00
385_A	461_A	0.999	1.00
207_F	211_V	0.999	1.00
92_I	97_Y	0.996	1.00
109_L	459_V	0.993	1.00
201_S	216_L	0.990	1.00
220_S	224_I	0.989	1.00
59_I	63_V	0.989	1.00
65_L	104_F	0.984	1.00
250_R	307_A	0.983	1.00
39_S	129_S	0.983	1.00
68_S	72_L	0.977	1.00
385_A	457_A	0.976	1.00
417_W	420_I	0.975	1.00
448_V	453_E	0.975	1.00
113_L	358_S	0.974	1.00
90_L	143_F	0.973	1.00
96_G	270_R	0.972	1.00
297_N	428_I	0.971	1.00
363_V	379_D	0.971	1.00
82_N	85_L	0.968	1.00
199_L	202_T	0.967	1.00
425_N	428_I	0.967	1.00
245_Y	257_S	0.967	1.00
381_P	458_V	0.965	1.00
29_L	32_S	0.964	1.00
383_A	441_F	0.963	1.00
190_I	223_F	0.962	1.00
214_P	218_F	0.960	1.00
103_V	135_L	0.957	1.00
266_I	270_R	0.956	1.00
89_S	206_L	0.956	1.00
254_A	355_G	0.955	1.00
381_P	385_A	0.950	1.00
47_N	50_D	0.950	1.00
174_V	177_G	0.948	1.00
208_T	212_I	0.942	1.00
400_F	467_L	0.942	1.00
68_S	71_F	0.942	1.00
95_P	340_L	0.939	1.00
131_M	255_F	0.938	1.00
190_I	226_I	0.937	1.00
386_I	441_F	0.937	1.00
258_S	262_L	0.936	1.00
265_I	343_S	0.934	1.00
75_S	80_V	0.933	1.00
346_Y	350_Q	0.933	1.00
170_D	246_T	0.932	1.00
58_V	61_S	0.930	1.00
306_V	357_V	0.930	1.00
54_F	58_V	0.930	1.00
57_S	60_L	0.929	1.00
171_Y	175_D	0.927	1.00
321_I	343_S	0.926	1.00
242_P	312_F	0.919	1.00
132_L	136_L	0.917	1.00
55_R	59_I	0.917	1.00
77_T	80_V	0.912	1.00
137_G	160_A	0.912	1.00
80_V	84_T	0.912	1.00
61_S	111_I	0.909	1.00
297_N	432_Y	0.909	1.00
198_Y	210_S	0.906	1.00
215_N	218_F	0.906	1.00
99_F	266_I	0.905	1.00
265_I	321_I	0.905	1.00
373_R	439_E	0.904	1.00
198_Y	220_S	0.902	1.00
317_Q	342_Q	0.899	1.00
359_H	457_A	0.893	1.00
454_R	458_V	0.893	1.00
57_S	128_L	0.892	1.00
214_P	217_F	0.892	1.00
57_S	61_S	0.892	1.00
448_V	451_S	0.890	1.00
466_I	470_V	0.886	1.00
289_S	323_I	0.884	1.00
241_L	245_Y	0.884	1.00
324_G	338_G	0.882	1.00
151_L	155_A	0.881	1.00
96_G	100_S	0.878	1.00
70_A	73_I	0.878	1.00
245_Y	314_S	0.877	1.00
341_V	345_A	0.876	1.00
305_D	368_D	0.876	1.00
52_N	55_R	0.875	1.00
330_V	334_I	0.871	1.00
385_A	458_V	0.869	1.00
204_S	210_S	0.869	1.00
286_I	289_S	0.867	1.00
71_F	75_S	0.866	1.00
317_Q	432_Y	0.863	1.00
86_F	148_I	0.862	1.00
257_S	350_Q	0.861	1.00
298_I	428_I	0.860	1.00
139_F	143_F	0.860	1.00
151_L	195_F	0.860	1.00
137_G	153_T	0.857	1.00
30_I	34_F	0.857	1.00
433_Y	436_I	0.857	1.00
138_L	157_S	0.854	1.00
43_L	129_S	0.853	1.00
197_S	201_S	0.852	1.00
314_S	346_Y	0.850	1.00
283_V	286_I	0.849	1.00
62_V	65_L	0.849	1.00
293_M	319_G	0.848	1.00
293_M	323_I	0.845	1.00
81_I	85_L	0.845	1.00
76_W	80_V	0.843	1.00
317_Q	429_S	0.843	1.00
360_V	375_I	0.839	1.00
165_A	244_V	0.838	1.00
80_V	85_L	0.837	1.00
213_Y	216_L	0.835	1.00
290_V	323_I	0.834	1.00
138_L	259_V	0.832	1.00
65_L	68_S	0.831	1.00
291_A	295_V	0.829	1.00
378_Q	445_E	0.828	1.00
77_T	82_N	0.828	1.00
50_D	54_F	0.827	1.00
259_V	262_L	0.826	1.00
268_L	325_F	0.825	1.00
219_F	223_F	0.825	1.00
265_I	322_L	0.823	1.00
221_I	281_E	0.823	1.00
286_I	290_V	0.820	1.00
373_R	443_E	0.819	1.00
142_S	266_I	0.818	1.00
222_S	226_I	0.815	1.00
300_A	432_Y	0.814	1.00
78_A	81_I	0.811	1.00
265_I	318_M	0.811	1.00
39_S	136_L	0.810	1.00
162_Y	177_G	0.810	1.00
218_F	222_S	0.810	1.00
384_F	441_F	0.808	1.00
109_L	456_I	0.807	1.00
406_L	410_E	0.807	1.00
257_S	314_S	0.806	1.00
38_S	42_V	0.800	1.00
125_S	129_S	0.800	1.00
320_Y	408_L	0.798	1.00
64_L	67_V	0.796	1.00
107_G	131_M	0.796	1.00
102_T	344_L	0.793	1.00
309_I	436_I	0.792	1.00
466_I	473_I	0.791	1.00
306_V	372_L	0.791	1.00
172_K	247_D	0.791	1.00
290_V	418_L	0.791	1.00
38_S	64_L	0.791	1.00
289_S	322_L	0.789	1.00
50_D	53_R	0.787	1.00
464_S	468_G	0.787	1.00
437_V	442_R	0.785	1.00
64_L	71_F	0.785	1.00
352_G	460_S	0.785	1.00
296_G	299_T	0.783	1.00
400_F	464_S	0.783	1.00
449_I	452_S	0.782	1.00
383_A	387_V	0.782	1.00
110_A	355_G	0.781	1.00
78_A	82_N	0.781	1.00
269_F	336_V	0.780	1.00
296_G	316_T	0.778	1.00
455_N	459_V	0.777	1.00
349_A	401_G	0.777	1.00
409_F	419_T	0.776	1.00
377_S	380_K	0.774	1.00
127_M	251_I	0.773	1.00
48_G	51_E	0.770	1.00
103_V	138_L	0.769	1.00
33_I	37_F	0.768	1.00
434_V	438_R	0.767	1.00
58_V	64_L	0.766	1.00
262_L	318_M	0.761	1.00
157_S	263_I	0.761	1.00
392_S	399_I	0.759	1.00
390_I	436_I	0.758	1.00
421_I	425_N	0.757	1.00
178_I	182_I	0.757	1.00
55_R	58_V	0.756	1.00
134_S	161_S	0.754	1.00
310_L	353_L	0.754	1.00
63_V	67_V	0.750	1.00
89_S	146_N	0.749	1.00
384_F	387_V	0.748	1.00
65_L	69_L	0.747	1.00
369_I	439_E	0.747	1.00
384_F	388_V	0.746	1.00
40_I	43_L	0.745	1.00
32_S	143_F	0.741	1.00
53_R	56_L	0.740	1.00
366_T	372_L	0.738	1.00
116_D	450_K	0.737	1.00
154_W	191_M	0.736	1.00
394_L	430_A	0.735	1.00
165_A	256_I	0.731	1.00
330_V	337_V	0.731	1.00
294_L	298_I	0.729	1.00
187_S	227_A	0.726	1.00
101_I	105_S	0.725	1.00
427_A	431_G	0.724	1.00
39_S	42_V	0.723	1.00
47_N	51_E	0.721	1.00
216_L	220_S	0.718	1.00
124_R	128_L	0.712	1.00
138_L	260_G	0.712	1.00
192_I	196_A	0.711	1.00
467_L	474_V	0.710	1.00
72_L	101_I	0.709	1.00
198_Y	224_I	0.707	1.00
106_I	255_F	0.707	1.00
355_G	456_I	0.706	1.00
313_S	346_Y	0.704	1.00
117_H	251_I	0.703	1.00
460_S	463_L	0.703	1.00
162_Y	184_G	0.703	1.00
398_P	469_I	0.703	1.00
57_S	64_L	0.703	1.00
46_D	50_D	0.703	1.00
399_I	403_W	0.702	1.00
430_A	434_V	0.702	1.00
297_N	313_S	0.702	1.00
204_S	207_F	0.702	1.00
57_S	72_L	0.701	1.00
395_G	405_K	0.699	1.00
76_W	82_N	0.698	1.00
342_Q	349_A	0.697	1.00
250_R	358_S	0.697	1.00
62_V	72_L	0.696	1.00
75_S	81_I	0.694	1.00
34_F	38_S	0.691	1.00
146_N	149_I	0.691	1.00
185_L	188_S	0.690	1.00
423_V	426_S	0.688	1.00
303_R	312_F	0.685	1.00
385_A	389_L	0.685	1.00
81_I	84_T	0.684	1.00
217_F	220_S	0.682	1.00
77_T	84_T	0.680	1.00
271_V	275_S	0.679	1.00
253_V	261_K	0.679	1.00
69_L	101_I	0.678	1.00
38_S	132_L	0.676	1.00
42_V	46_D	0.675	1.00
246_T	308_A	0.674	1.00
61_S	67_V	0.671	1.00
246_T	305_D	0.671	1.00
356_I	389_L	0.670	1.00
61_S	68_S	0.668	1.00
392_S	401_G	0.668	1.00
95_P	266_I	0.667	1.00
114_S	251_I	0.667	1.00
145_N	149_I	0.666	1.00
58_V	62_V	0.666	1.00
55_R	60_L	0.664	1.00
290_V	294_L	0.663	1.00
197_S	219_F	0.663	1.00
335_A	339_I	0.663	1.00
320_Y	425_N	0.662	1.00
104_F	135_L	0.661	1.00
116_D	452_S	0.661	1.00
205_L	209_T	0.658	1.00
369_I	436_I	0.658	1.00
56_L	60_L	0.657	1.00
32_S	90_L	0.656	1.00
78_A	84_T	0.656	1.00
101_I	104_F	0.655	1.00
110_A	254_A	0.654	1.00
297_N	429_S	0.654	1.00
284_I	287_V	0.654	1.00
172_K	175_D	0.654	1.00
232_I	264_G	0.653	1.00
35_I	38_S	0.653	1.00
134_S	255_F	0.652	1.00
364_S	372_L	0.651	1.00
456_I	460_S	0.649	1.00
109_L	351_V	0.646	1.00
57_S	111_I	0.646	1.00
80_V	83_Y	0.644	1.00
289_S	293_M	0.643	1.00
457_A	460_S	0.642	1.00
455_N	458_V	0.642	1.00
68_S	100_S	0.641	1.00
299_T	312_F	0.641	1.00
107_G	255_F	0.640	1.00
97_Y	101_I	0.640	1.00
294_L	421_I	0.640	1.00
53_R	57_S	0.639	1.00
239_A	242_P	0.637	1.00
356_I	385_A	0.634	1.00
381_P	454_R	0.634	1.00
218_F	280_V	0.634	1.00
286_I	323_I	0.632	1.00
219_F	222_S	0.631	1.00
157_S	261_K	0.630	1.00
95_P	99_F	0.630	1.00
349_A	393_L	0.629	1.00
257_S	261_K	0.628	1.00
92_I	96_G	0.627	1.00
395_G	399_I	0.625	1.00
35_I	136_L	0.625	1.00
61_S	71_F	0.624	1.00
91_L	208_T	0.624	1.00
154_W	263_I	0.624	1.00
253_V	307_A	0.621	1.00
48_G	52_N	0.620	1.00
75_S	83_Y	0.618	1.00
303_R	309_I	0.618	1.00
76_W	84_T	0.617	1.00
437_V	441_F	0.615	1.00
348_I	400_F	0.614	1.00
409_F	426_S	0.612	1.00
242_P	315_I	0.610	1.00
258_S	351_V	0.609	1.00
112_L	455_N	0.605	1.00
56_L	59_I	0.605	1.00
245_Y	311_S	0.604	1.00
64_L	104_F	0.602	1.00
313_S	350_Q	0.601	1.00
293_M	320_Y	0.600	1.00
216_L	219_F	0.599	1.00
317_Q	350_Q	0.599	1.00
253_V	256_I	0.598	1.00
62_V	68_S	0.597	1.00
257_S	262_L	0.596	1.00
448_V	452_S	0.594	1.00
349_A	464_S	0.594	1.00
79_S	84_T	0.593	1.00
287_V	290_V	0.593	1.00
451_S	456_I	0.591	1.00
465_I	468_G	0.591	1.00
465_I	469_I	0.590	1.00
211_V	273_Y	0.589	1.00
344_L	474_V	0.586	1.00
329_T	411_S	0.586	1.00
387_V	442_R	0.586	1.00
279_M	282_L	0.586	1.00
161_S	260_G	0.584	1.00
257_S	346_Y	0.584	1.00
397_P	402_F	0.582	1.00
29_L	88_K	0.581	1.00
363_V	453_E	0.581	1.00
170_D	247_D	0.580	1.00
155_A	231_K	0.580	1.00
126_S	130_L	0.579	1.00
35_I	39_S	0.578	1.00
79_S	83_Y	0.577	1.00
376_S	387_V	0.574	1.00
359_H	449_I	0.572	1.00
382_L	449_I	0.570	1.00
298_I	302_S	0.569	1.00
245_Y	258_S	0.568	1.00
32_S	39_S	0.567	1.00
376_S	441_F	0.567	1.00
454_R	457_A	0.565	1.00
127_M	252_S	0.564	1.00
113_L	254_A	0.563	1.00
65_L	72_L	0.563	1.00
150_V	191_M	0.563	1.00
72_L	97_Y	0.563	1.00
73_I	77_T	0.563	1.00
145_N	270_R	0.562	1.00
385_A	454_R	0.561	1.00
144_A	153_T	0.561	1.00
110_A	131_M	0.560	1.00
221_I	225_S	0.560	1.00
299_T	303_R	0.557	0.99
110_A	251_I	0.557	0.99
388_V	465_I	0.557	0.99
103_V	139_F	0.554	0.99
346_Y	354_F	0.554	0.99
314_S	318_M	0.554	0.99
115_K	452_S	0.553	0.99
299_T	302_S	0.553	0.99
417_W	421_I	0.552	0.99
193_I	197_S	0.552	0.99
102_T	343_S	0.551	0.99
452_S	456_I	0.550	0.99
306_V	440_V	0.549	0.99
383_A	440_V	0.548	0.99
313_S	317_Q	0.547	0.99
29_L	33_I	0.547	0.99
105_S	463_L	0.546	0.99
388_V	392_S	0.545	0.99
62_V	71_F	0.545	0.99
133_L	137_G	0.544	0.99
463_L	466_I	0.543	0.99
334_I	414_T	0.540	0.99
395_G	401_G	0.537	0.99
64_L	73_I	0.536	0.99
109_L	460_S	0.536	0.99
151_L	188_S	0.536	0.99
149_I	152_T	0.533	0.99
59_I	66_G	0.532	0.99
127_M	167_L	0.532	0.99
467_L	471_I	0.529	0.99
60_L	132_L	0.528	0.99
380_K	383_A	0.528	0.99
375_I	379_D	0.528	0.99
37_F	41_S	0.527	0.99
48_G	53_R	0.526	0.99
235_F	296_G	0.526	0.99
138_L	263_I	0.526	0.99
135_L	139_F	0.526	0.99
386_I	433_Y	0.524	0.99
341_V	407_F	0.524	0.99
431_G	435_P	0.524	0.99
355_G	460_S	0.524	0.99
249_D	307_A	0.524	0.99
399_I	465_I	0.522	0.99
103_V	107_G	0.522	0.99
62_V	70_A	0.521	0.99
342_Q	345_A	0.517	0.99
403_W	407_F	0.517	0.99
130_L	160_A	0.517	0.99
250_R	253_V	0.517	0.99
44_F	48_G	0.517	0.99
304_R	313_S	0.515	0.99
359_H	363_V	0.512	0.99
96_G	142_S	0.512	0.99
34_F	63_V	0.510	0.99
261_K	318_M	0.510	0.99
161_S	256_I	0.510	0.99
449_I	454_R	0.509	0.99
273_Y	276_D	0.509	0.99
34_F	60_L	0.509	0.99
257_S	354_F	0.508	0.99
47_N	52_N	0.508	0.99
58_V	65_L	0.507	0.99
369_I	372_L	0.507	0.99
469_I	473_I	0.507	0.99
38_S	43_L	0.507	0.99
409_F	423_V	0.507	0.99
438_R	443_E	0.506	0.99
457_A	461_A	0.505	0.99
195_F	205_L	0.504	0.99
72_L	76_W	0.503	0.99
317_Q	393_L	0.503	0.99
50_D	55_R	0.502	0.99
241_L	244_V	0.502	0.99
161_S	165_A	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3rkoM	1	0.9379	100	0.223	Contact Map
3rkoN	1	0.9379	100	0.236	Contact Map
4he8L	1	0.9296	100	0.241	Contact Map
3rkoL	1	0.9358	100	0.243	Contact Map
4he8M	1	0.9027	100	0.254	Contact Map
4he8N	1	0.8716	100	0.296	Contact Map
4he8K	1	0.1905	52.5	0.961	Contact Map
3rkoK	1	0.1988	45.1	0.963	Contact Map
3imoA	2	0.0932	12.2	0.972	Contact Map
2yevB	1	0.1718	4.8	0.976	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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