APGM - SULSO - GREMLIN Contacts

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APGM - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase

UniProt:	Q980A0	Sequences: MKQYKILLIVADGLGDRPVSKLNGLTPLEAANKPAITDLLKNSMIGLMDPISPGIIPGSDTSHLSIFGLDPHVYYRGRGAFEALGAGATLSHGDVAFRGNFATVNNDLVVVDRRAGRKLEEGEQLVKELNEKIKEINDVKIKFYKGTEHRIAVVLSGKGISDKVSDTDPHHEGLKVLESKPLEDSNEAIRTAEIINILTRKVFDVLNSSEINKRRIEQGEKPANIVLLRGAAHYVKLPPFSSYTKLKAAAVSATALIKGICRELGMNVITPSGATGGIDTNYNAKAKAAIELLKENDFVFLHIKATDAASHDGLVEEKVKAIERIDRVIGAIIDNIGRDNLILMFTGDHVTPVEIKEHTGDPVPVLLYVPYPIINDNVGDFNEKEARKGSLRIRGLDVTNILLNYSNRAEKYGS	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	414 (389)
Sequences:	741 (585)
Seq/√Len:	29.7

SULSO - APGM

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
29_E	382_N	6.186	1.00
29_E	384_K	5.747	1.00
16_D	27_P	4.831	1.00
39_L	366_L	4.208	1.00
90_L	154_V	3.772	1.00
35_A	330_G	3.646	1.00
214_R	218_Q	3.626	1.00
313_G	356_K	3.603	1.00
281_N	284_A	3.504	1.00
216_I	222_P	3.475	1.00
41_K	379_G	3.382	1.00
74_Y	238_P	3.178	1.00
283_N	327_R	3.052	1.00
249_A	296_N	3.000	1.00
314_L	317_E	2.995	1.00
267_N	296_N	2.948	1.00
128_E	205_V	2.906	1.00
291_E	295_E	2.839	1.00
45_I	386_A	2.821	1.00
241_S	247_K	2.673	1.00
118_K	121_E	2.624	1.00
248_A	266_M	2.607	1.00
250_A	261_C	2.587	1.00
250_A	257_I	2.578	0.99
382_N	385_E	2.555	0.99
287_K	291_E	2.494	0.99
90_L	96_A	2.488	0.99
33_K	37_T	2.484	0.99
213_K	216_I	2.479	0.99
43_S	366_L	2.475	0.99
38_D	42_N	2.473	0.99
267_N	295_E	2.423	0.99
249_A	292_L	2.325	0.99
344_M	402_L	2.251	0.99
128_E	209_S	2.231	0.99
342_I	369_V	2.206	0.98
142_K	156_S	2.190	0.98
214_R	217_E	2.180	0.98
17_R	361_D	2.170	0.98
91_S	156_S	2.169	0.98
125_L	223_A	2.141	0.98
269_I	292_L	2.091	0.98
36_I	345_F	2.084	0.98
143_F	198_L	2.033	0.97
17_R	354_E	2.003	0.97
355_I	359_T	1.960	0.97
33_K	322_I	1.929	0.96
376_D	389_G	1.912	0.96
394_R	397_D	1.910	0.96
49_D	53_P	1.906	0.96
286_A	332_I	1.861	0.95
310_S	352_P	1.860	0.95
272_S	281_N	1.829	0.95
345_F	366_L	1.828	0.95
45_I	378_V	1.819	0.95
11_A	325_I	1.803	0.94
104_V	225_I	1.790	0.94
60_D	75_Y	1.782	0.94
315_V	319_V	1.773	0.94
167_T	179_S	1.759	0.94
33_K	36_I	1.740	0.93
240_F	248_A	1.719	0.93
18_P	24_G	1.714	0.93
11_A	14_L	1.690	0.92
102_A	110_V	1.677	0.92
15_G	350_V	1.659	0.92
10_V	66_I	1.647	0.91
42_N	368_Y	1.640	0.91
7_L	301_L	1.615	0.90
88_A	152_A	1.609	0.90
76_R	80_A	1.607	0.90
202_V	225_I	1.602	0.90
93_G	157_G	1.580	0.89
291_E	294_K	1.566	0.89
199_T	228_L	1.522	0.88
110_V	172_E	1.509	0.87
303_I	328_V	1.508	0.87
14_L	322_I	1.508	0.87
344_M	398_V	1.493	0.86
30_A	319_V	1.491	0.86
244_T	399_T	1.489	0.86
141_I	153_V	1.475	0.86
271_P	288_A	1.467	0.85
253_A	285_K	1.459	0.85
84_L	263_E	1.456	0.85
47_L	387_R	1.456	0.85
348_D	358_H	1.447	0.85
309_A	317_E	1.443	0.85
58_G	230_G	1.439	0.84
143_F	153_V	1.432	0.84
238_P	242_S	1.429	0.84
29_E	385_E	1.402	0.83
290_I	335_N	1.397	0.83
179_S	196_N	1.388	0.82
286_A	328_V	1.367	0.81
105_N	111_V	1.340	0.80
249_A	269_I	1.330	0.79
336_I	341_L	1.327	0.79
20_S	23_N	1.326	0.79
243_Y	400_N	1.322	0.79
9_I	325_I	1.320	0.79
54_G	360_G	1.314	0.78
123_E	127_K	1.307	0.78
49_D	392_R	1.305	0.78
114_R	117_R	1.303	0.78
280_T	285_K	1.303	0.78
9_I	303_I	1.296	0.77
286_A	331_A	1.293	0.77
212_N	215_R	1.291	0.77
25_L	30_A	1.289	0.77
380_D	385_E	1.286	0.77
141_I	194_I	1.284	0.77
123_E	145_K	1.283	0.77
79_G	228_L	1.283	0.77
247_K	296_N	1.271	0.76
100_N	150_R	1.268	0.76
45_I	389_G	1.253	0.75
320_K	324_R	1.235	0.74
149_H	227_L	1.234	0.74
117_R	312_D	1.215	0.73
189_I	193_E	1.215	0.73
70_D	73_V	1.209	0.72
197_I	201_K	1.207	0.72
66_I	346_T	1.206	0.72
214_R	220_E	1.192	0.71
143_F	226_V	1.188	0.71
238_P	243_Y	1.181	0.70
6_I	402_L	1.175	0.70
43_S	368_Y	1.170	0.70
369_V	372_P	1.170	0.70
240_F	246_L	1.161	0.69
10_V	300_F	1.154	0.69
258_K	270_T	1.140	0.68
348_D	351_T	1.135	0.67
45_I	376_D	1.135	0.67
351_T	358_H	1.132	0.67
8_L	298_F	1.132	0.67
127_K	131_E	1.125	0.67
369_V	373_I	1.117	0.66
290_I	331_A	1.106	0.65
149_H	229_R	1.100	0.65
67_F	257_I	1.094	0.64
113_R	117_R	1.093	0.64
272_S	288_A	1.091	0.64
94_D	156_S	1.083	0.64
282_Y	321_A	1.081	0.64
35_A	333_I	1.080	0.63
331_A	335_N	1.079	0.63
102_A	227_L	1.077	0.63
201_K	204_D	1.074	0.63
54_G	362_P	1.071	0.63
276_G	280_T	1.068	0.63
133_I	198_L	1.054	0.62
198_L	202_V	1.053	0.61
174_L	179_S	1.050	0.61
124_Q	211_I	1.050	0.61
275_T	281_N	1.042	0.61
5_K	297_D	1.042	0.61
15_G	66_I	1.038	0.60
168_D	229_R	1.033	0.60
292_L	296_N	1.032	0.60
198_L	226_V	1.031	0.60
208_S	213_K	1.030	0.60
121_E	211_I	1.028	0.60
311_H	348_D	1.027	0.59
15_G	346_T	1.024	0.59
67_F	381_F	1.024	0.59
177_L	180_K	1.023	0.59
378_V	385_E	1.023	0.59
257_I	261_C	1.018	0.59
170_H	254_T	1.013	0.58
42_N	201_K	1.008	0.58
311_H	358_H	1.006	0.58
78_R	351_T	1.006	0.58
67_F	228_L	1.003	0.58
60_D	80_A	1.000	0.57
163_K	183_E	0.998	0.57
256_L	308_A	0.990	0.57
38_D	337_G	0.989	0.57
105_N	108_L	0.981	0.56
94_D	154_V	0.980	0.56
204_D	207_N	0.980	0.56
275_T	280_T	0.980	0.56
211_I	218_Q	0.978	0.56
254_T	257_I	0.976	0.56
99_G	151_I	0.975	0.55
281_N	287_K	0.971	0.55
239_P	242_S	0.969	0.55
38_D	333_I	0.968	0.55
62_S	302_H	0.961	0.54
249_A	299_V	0.960	0.54
124_Q	127_K	0.959	0.54
306_T	321_A	0.957	0.54
30_A	33_K	0.956	0.54
22_L	30_A	0.951	0.54
67_F	250_A	0.950	0.54
399_T	402_L	0.949	0.53
301_L	329_I	0.943	0.53
271_P	284_A	0.942	0.53
110_V	113_R	0.941	0.53
39_L	343_L	0.939	0.53
170_H	256_L	0.938	0.53
35_A	334_D	0.936	0.52
203_F	225_I	0.933	0.52
244_T	251_V	0.932	0.52
45_I	366_L	0.932	0.52
96_A	156_S	0.931	0.52
64_L	69_L	0.930	0.52
352_P	362_P	0.930	0.52
168_D	227_L	0.927	0.52
258_K	274_A	0.925	0.52
215_R	219_G	0.924	0.51
251_V	269_I	0.919	0.51
215_R	220_E	0.918	0.51
78_R	348_D	0.917	0.51
114_R	312_D	0.917	0.51
283_N	287_K	0.916	0.51
350_V	359_T	0.915	0.51
275_T	279_D	0.914	0.51
260_I	332_I	0.907	0.50
141_I	219_G	0.904	0.50
276_G	285_K	0.904	0.50
179_S	195_I	0.901	0.50
121_E	215_R	0.901	0.50
284_A	288_A	0.898	0.49
329_I	345_F	0.896	0.49
346_T	350_V	0.887	0.49
78_R	358_H	0.887	0.49
10_V	195_I	0.883	0.48
113_R	168_D	0.878	0.48
205_V	241_S	0.877	0.48
117_R	277_G	0.877	0.48
132_K	205_V	0.873	0.47
342_I	402_L	0.871	0.47
365_V	391_L	0.866	0.47
19_V	353_V	0.862	0.47
70_D	242_S	0.859	0.46
328_V	331_A	0.856	0.46
9_I	97_F	0.853	0.46
57_P	313_G	0.851	0.46
87_G	262_R	0.850	0.46
200_R	203_F	0.849	0.46
82_E	311_H	0.848	0.45
314_L	353_V	0.843	0.45
17_R	20_S	0.842	0.45
335_N	338_R	0.841	0.45
122_G	399_T	0.840	0.45
103_T	221_K	0.837	0.45
6_I	342_I	0.836	0.45
195_I	228_L	0.831	0.44
316_E	320_K	0.830	0.44
130_N	142_K	0.824	0.44
112_D	117_R	0.823	0.44
78_R	311_H	0.823	0.44
80_A	232_A	0.822	0.43
204_D	363_V	0.821	0.43
208_S	266_M	0.819	0.43
133_I	143_F	0.818	0.43
78_R	307_D	0.816	0.43
43_S	369_V	0.815	0.43
307_D	348_D	0.811	0.43
39_L	367_L	0.810	0.43
199_T	226_V	0.809	0.42
287_K	331_A	0.808	0.42
148_E	308_A	0.808	0.42
128_E	210_E	0.808	0.42
51_I	65_S	0.807	0.42
320_K	323_E	0.804	0.42
114_R	229_R	0.803	0.42
113_R	229_R	0.800	0.42
60_D	76_R	0.800	0.42
137_N	143_F	0.798	0.42
7_L	220_E	0.798	0.42
149_H	168_D	0.798	0.42
330_G	334_D	0.795	0.41
107_D	175_K	0.795	0.41
57_P	360_G	0.793	0.41
92_H	234_Y	0.788	0.41
317_E	320_K	0.784	0.41
71_P	74_Y	0.784	0.41
129_L	202_V	0.783	0.40
133_I	205_V	0.780	0.40
173_G	333_I	0.777	0.40
98_R	150_R	0.777	0.40
287_K	314_L	0.773	0.40
261_C	367_L	0.772	0.40
281_N	288_A	0.772	0.40
44_M	401_I	0.771	0.40
98_R	170_H	0.768	0.39
23_N	43_S	0.768	0.39
307_D	358_H	0.768	0.39
39_L	73_V	0.768	0.39
237_L	263_E	0.767	0.39
360_G	367_L	0.758	0.39
113_R	227_L	0.757	0.38
171_H	254_T	0.757	0.38
102_A	172_E	0.755	0.38
247_K	267_N	0.755	0.38
347_G	350_V	0.754	0.38
238_P	241_S	0.752	0.38
14_L	347_G	0.752	0.38
137_N	197_I	0.752	0.38
211_I	215_R	0.750	0.38
172_E	179_S	0.750	0.38
64_L	260_I	0.748	0.38
7_L	336_I	0.746	0.38
80_A	90_L	0.746	0.38
207_N	224_N	0.745	0.38
310_S	355_I	0.745	0.38
272_S	284_A	0.744	0.38
307_D	311_H	0.744	0.38
82_E	307_D	0.743	0.37
7_L	343_L	0.743	0.37
58_G	63_H	0.742	0.37
51_I	57_P	0.742	0.37
39_L	329_I	0.741	0.37
333_I	343_L	0.741	0.37
101_F	113_R	0.740	0.37
20_S	393_I	0.737	0.37
378_V	389_G	0.735	0.37
98_R	112_D	0.735	0.37
286_A	290_I	0.734	0.37
311_H	351_T	0.733	0.37
241_S	294_K	0.732	0.37
82_E	146_G	0.731	0.37
349_H	358_H	0.729	0.36
32_N	323_E	0.729	0.36
164_V	191_T	0.728	0.36
202_V	347_G	0.726	0.36
125_L	209_S	0.724	0.36
11_A	96_A	0.718	0.36
84_L	333_I	0.718	0.36
211_I	216_I	0.713	0.35
267_N	391_L	0.711	0.35
13_G	31_A	0.709	0.35
292_L	295_E	0.708	0.35
250_A	367_L	0.708	0.35
255_A	357_E	0.707	0.35
129_L	133_I	0.706	0.35
7_L	244_T	0.705	0.35
111_V	221_K	0.704	0.35
106_N	251_V	0.702	0.34
96_A	235_V	0.701	0.34
209_S	212_N	0.699	0.34
141_I	155_L	0.699	0.34
212_N	219_G	0.698	0.34
93_G	161_S	0.696	0.34
80_A	231_A	0.695	0.34
239_P	269_I	0.694	0.34
132_K	201_K	0.691	0.34
286_A	301_L	0.691	0.34
99_G	153_V	0.689	0.34
228_L	277_G	0.689	0.34
65_S	71_P	0.688	0.33
114_R	227_L	0.687	0.33
165_S	182_L	0.686	0.33
21_K	386_A	0.686	0.33
80_A	112_D	0.685	0.33
307_D	351_T	0.684	0.33
79_G	117_R	0.683	0.33
35_A	38_D	0.680	0.33
44_M	390_S	0.678	0.33
65_S	329_I	0.677	0.33
117_R	149_H	0.677	0.33
117_R	229_R	0.677	0.33
62_S	308_A	0.674	0.32
352_P	359_T	0.674	0.32
212_N	220_E	0.673	0.32
146_G	255_A	0.670	0.32
102_A	229_R	0.670	0.32
209_S	215_R	0.668	0.32
102_A	149_H	0.664	0.32
310_S	359_T	0.662	0.32
97_F	164_V	0.662	0.32
64_L	74_Y	0.661	0.32
284_A	324_R	0.659	0.31
33_K	73_V	0.657	0.31
101_F	153_V	0.656	0.31
192_A	376_D	0.652	0.31
9_I	329_I	0.652	0.31
227_L	304_K	0.651	0.31
249_A	267_N	0.651	0.31
274_A	280_T	0.650	0.31
37_T	323_E	0.649	0.31
285_K	305_A	0.647	0.31
164_V	197_I	0.644	0.30
325_I	329_I	0.640	0.30
63_H	257_I	0.640	0.30
4_Y	271_P	0.639	0.30
55_I	72_H	0.638	0.30
33_K	325_I	0.638	0.30
123_E	154_V	0.637	0.30
11_A	329_I	0.637	0.30
100_N	229_R	0.637	0.30
252_S	261_C	0.637	0.30
73_V	238_P	0.636	0.30
324_R	327_R	0.636	0.30
63_H	304_K	0.635	0.30
208_S	387_R	0.634	0.30
15_G	359_T	0.634	0.30
201_K	205_V	0.633	0.30
69_L	235_V	0.630	0.30
150_R	229_R	0.629	0.29
283_N	331_A	0.628	0.29
82_E	348_D	0.626	0.29
281_N	285_K	0.623	0.29
101_F	145_K	0.622	0.29
266_M	298_F	0.621	0.29
86_A	146_G	0.618	0.29
367_L	402_L	0.618	0.29
114_R	304_K	0.617	0.29
76_R	235_V	0.616	0.29
151_I	255_A	0.616	0.29
82_E	145_K	0.615	0.29
16_D	26_T	0.615	0.29
57_P	62_S	0.614	0.28
164_V	291_E	0.613	0.28
112_D	116_G	0.613	0.28
116_G	221_K	0.612	0.28
196_N	224_N	0.610	0.28
44_M	365_V	0.610	0.28
78_R	349_H	0.608	0.28
104_V	111_V	0.604	0.28
30_A	386_A	0.600	0.28
273_G	288_A	0.599	0.28
59_S	256_L	0.598	0.27
323_E	326_D	0.597	0.27
170_H	253_A	0.596	0.27
113_R	149_H	0.596	0.27
22_L	315_V	0.596	0.27
146_G	280_T	0.595	0.27
170_H	230_G	0.594	0.27
96_A	154_V	0.593	0.27
36_I	303_I	0.593	0.27
210_E	219_G	0.593	0.27
78_R	82_E	0.592	0.27
319_V	323_E	0.592	0.27
16_D	50_P	0.591	0.27
119_L	151_I	0.591	0.27
122_G	206_L	0.590	0.27
63_H	255_A	0.590	0.27
152_A	309_A	0.589	0.27
161_S	191_T	0.587	0.27
47_L	392_R	0.586	0.27
61_T	230_G	0.585	0.27
124_Q	128_E	0.585	0.27
267_N	270_T	0.585	0.27
60_D	305_A	0.584	0.27
248_A	298_F	0.583	0.27
278_I	321_A	0.583	0.27
57_P	355_I	0.583	0.27
226_V	238_P	0.582	0.26
30_A	388_K	0.582	0.26
343_L	370_P	0.581	0.26
102_A	304_K	0.581	0.26
349_H	363_V	0.581	0.26
230_G	254_T	0.580	0.26
251_V	305_A	0.579	0.26
301_L	306_T	0.578	0.26
195_I	369_V	0.578	0.26
217_E	220_E	0.577	0.26
15_G	347_G	0.577	0.26
75_Y	80_A	0.575	0.26
125_L	128_E	0.573	0.26
229_R	304_K	0.572	0.26
101_F	158_K	0.569	0.26
88_A	114_R	0.569	0.26
271_P	274_A	0.568	0.26
59_S	254_T	0.568	0.26
15_G	148_E	0.568	0.26
243_Y	320_K	0.567	0.26
289_A	299_V	0.566	0.25
162_D	233_H	0.566	0.25
129_L	226_V	0.565	0.25
257_I	277_G	0.564	0.25
360_G	404_N	0.564	0.25
133_I	201_K	0.563	0.25
258_K	379_G	0.562	0.25
63_H	350_V	0.561	0.25
13_G	26_T	0.561	0.25
102_A	114_R	0.560	0.25
130_N	137_N	0.560	0.25
271_P	281_N	0.559	0.25
270_T	397_D	0.559	0.25
211_I	221_K	0.559	0.25
170_H	229_R	0.557	0.25
82_E	358_H	0.556	0.25
273_G	285_K	0.552	0.25
96_A	263_E	0.549	0.24
140_K	294_K	0.549	0.24
144_Y	154_V	0.548	0.24
63_H	171_H	0.546	0.24
95_V	301_L	0.546	0.24
155_L	389_G	0.545	0.24
63_H	85_G	0.545	0.24
99_G	228_L	0.545	0.24
32_N	320_K	0.545	0.24
33_K	352_P	0.544	0.24
253_A	308_A	0.544	0.24
10_V	350_V	0.544	0.24
342_I	367_L	0.541	0.24
241_S	245_K	0.541	0.24
336_I	382_N	0.541	0.24
253_A	356_K	0.538	0.24
10_V	15_G	0.537	0.24
147_T	381_F	0.537	0.24
57_P	98_R	0.537	0.24
302_H	307_D	0.537	0.24
51_I	61_T	0.536	0.24
344_M	367_L	0.536	0.24
349_H	364_P	0.536	0.24
267_N	287_K	0.535	0.24
31_A	326_D	0.535	0.24
8_L	174_L	0.535	0.24
69_L	96_A	0.535	0.24
229_R	312_D	0.535	0.24
210_E	214_R	0.534	0.24
50_P	346_T	0.533	0.24
173_G	177_L	0.533	0.24
143_F	382_N	0.533	0.24
128_E	294_K	0.532	0.24
28_L	69_L	0.532	0.24
275_T	285_K	0.531	0.23
146_G	170_H	0.531	0.23
42_N	294_K	0.530	0.23
85_G	152_A	0.530	0.23
153_V	228_L	0.530	0.23
330_G	341_L	0.529	0.23
18_P	34_P	0.529	0.23
52_S	284_A	0.527	0.23
307_D	349_H	0.527	0.23
365_V	369_V	0.525	0.23
133_I	137_N	0.524	0.23
254_T	308_A	0.524	0.23
114_R	148_E	0.523	0.23
61_T	75_Y	0.523	0.23
245_K	386_A	0.522	0.23
48_M	344_M	0.522	0.23
88_A	167_T	0.522	0.23
38_D	368_Y	0.522	0.23
373_I	376_D	0.521	0.23
33_K	310_S	0.521	0.23
23_N	376_D	0.521	0.23
40_L	46_G	0.521	0.23
20_S	24_G	0.521	0.23
253_A	305_A	0.521	0.23
36_I	269_I	0.521	0.23
43_S	385_E	0.521	0.23
305_A	321_A	0.520	0.23
51_I	168_D	0.520	0.23
110_V	255_A	0.520	0.23
62_S	351_T	0.519	0.23
97_F	231_A	0.518	0.23
18_P	216_I	0.518	0.23
75_Y	231_A	0.518	0.23
127_K	295_E	0.518	0.23
93_G	389_G	0.516	0.23
24_G	236_K	0.516	0.23
335_N	345_F	0.516	0.23
141_I	389_G	0.514	0.22
124_Q	214_R	0.514	0.22
43_S	84_L	0.514	0.22
25_L	32_N	0.514	0.22
74_Y	260_I	0.513	0.22
277_G	312_D	0.513	0.22
103_T	212_N	0.513	0.22
79_G	191_T	0.513	0.22
254_T	357_E	0.512	0.22
4_Y	308_A	0.512	0.22
334_D	338_R	0.512	0.22
28_L	381_F	0.511	0.22
67_F	302_H	0.510	0.22
121_E	220_E	0.509	0.22
53_P	92_H	0.509	0.22
164_V	361_D	0.508	0.22
219_G	222_P	0.506	0.22
98_R	253_A	0.506	0.22
193_E	197_I	0.506	0.22
266_M	386_A	0.504	0.22
57_P	352_P	0.503	0.22
59_S	274_A	0.502	0.22
64_L	71_P	0.502	0.22
63_H	166_D	0.502	0.22
115_A	192_A	0.500	0.22

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3kd8A	1	0.8937	100	0.244	Contact Map
2zktA	3	0.93	100	0.271	Contact Map
1o98A	1	0.901	99.9	0.835	Contact Map
4my4A	1	0.8961	99.9	0.842	Contact Map
3igzB	1	0.901	99.9	0.856	Contact Map
3tg0A	2	0.7971	99.7	0.882	Contact Map
1zedA	2	0.8188	99.7	0.885	Contact Map
3m7vA	1	0.8068	99.6	0.888	Contact Map
2w5vA	2	0.7126	99.6	0.891	Contact Map
1k7hA	2	0.8116	99.6	0.892	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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