Q97ZF9 - SULSO - GREMLIN Contacts

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Q97ZF9 - DNA repair protein rad25

UniProt:	Q97ZF9	Sequences: MSSRTFYIKQWLDEDDFKRLLLFSRYLGRDSSGSQFMIDLERAKRNGVKPNEIVEILEDYDVRLSQEDIATLREKLLDCSFDIEAGKIIMKPYTYLADVLEKINGKNENSEHRFKIRYDKQNRRFIVRPMDYFNLLQKLRENGLEVKELNLSFKEFEFEFNGQLREYQREAIENWIKNGNKGVIALPTGAGKTVVGIKGIDIIRKPTLIVTFTKEQMLQWKEAILKFTSKRPDIGLYYSEEKRIRPITITTYHTAYRHLPQLFDKFYLLIVDEVHHLPADKFKLIAEGLIAPYRMGLSATPHREDNKHNELFSLIGGIIYYKSVTELAKLGYLASYEIIQKKVRLTLEERKRYNELLNRFKALSKGRKVSELIELVKKGDESAIEAMRVYNEMRKIVNFASEKMKALDEILKSEKGKILIFTQYIDQAEEIAKRYNSLLLTGKMSKEERKRVLVTFKTMNAGVLVLTTVGDEGIDIPDANVGIIVTGTSSRRQFIQRLGRIMRPYNGKQAKLYEIVVSGTPEEYQAKKRKETDILSFEGMSYSSSENIDRD	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	551 (467)
Sequences:	7262 (5329)
Seq/√Len:	246.6

ECOLI - RAPA DEAD YFJK YEJH RECG RECQ SRMB DBPA RHLB RHLE
BACSU - YWQA RECG YQHH RECQ YPRA RECS CSHA COMFA DBPA CSHB
HALSA - O52003 RAD25 O51997 Q9HMW5 Q9HNB2 Q9HN80 HELS
SULSO - Q97ZF9 Q97X74 Q97ZV2 Q981C8 Q97XQ7 HELS Q97YC4

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
197_I	224_I	4.207	1.00
416_G	480_N	3.920	1.00
224_I	247_I	3.769	1.00
274_V	296_G	3.617	1.00
344_R	518_S	3.270	1.00
171_A	195_V	2.818	1.00
335_S	509_Q	2.808	1.00
314_L	324_V	2.698	1.00
429_E	439_L	2.698	1.00
321_Y	324_V	2.649	1.00
314_L	321_Y	2.611	1.00
324_V	328_A	2.546	1.00
318_I	321_Y	2.529	1.00
324_V	327_L	2.518	1.00
60_Y	63_R	2.456	1.00
318_I	322_K	2.416	1.00
47_G	50_P	2.412	1.00
314_L	322_K	2.373	1.00
422_T	428_A	2.361	1.00
61_D	64_L	2.270	1.00
318_I	324_V	2.238	1.00
411_L	418_I	2.204	1.00
200_I	207_T	2.133	1.00
59_D	63_R	2.124	1.00
84_E	87_K	2.119	1.00
328_A	331_G	2.063	1.00
50_P	53_I	2.055	1.00
68_D	71_T	2.033	1.00
422_T	431_I	2.029	1.00
431_I	485_V	2.025	1.00
482_G	501_I	2.002	1.00
196_G	270_I	1.992	1.00
451_R	455_T	1.991	1.00
44_K	47_G	1.976	1.00
432_A	437_S	1.973	1.00
83_I	87_K	1.927	1.00
280_D	283_K	1.927	1.00
60_Y	64_L	1.925	1.00
51_N	54_V	1.918	1.00
46_N	50_P	1.915	1.00
88_I	91_K	1.912	1.00
221_K	225_L	1.908	1.00
406_A	409_E	1.905	1.00
314_L	318_I	1.899	1.00
93_Y	96_L	1.898	1.00
45_R	49_K	1.895	1.00
45_R	48_V	1.889	1.00
62_V	65_S	1.887	1.00
258_H	262_L	1.877	1.00
432_A	436_N	1.867	1.00
66_Q	69_I	1.865	1.00
457_K	478_D	1.854	1.00
55_E	58_E	1.829	1.00
92_P	95_Y	1.797	1.00
68_D	72_L	1.788	1.00
536_S	541_S	1.781	1.00
69_I	72_L	1.781	1.00
63_R	66_Q	1.771	1.00
407_L	411_L	1.767	1.00
119_D	122_N	1.761	1.00
222_E	454_V	1.711	1.00
85_A	88_I	1.682	1.00
49_K	53_I	1.677	1.00
445_S	448_E	1.673	1.00
53_I	56_I	1.672	1.00
49_K	52_E	1.655	1.00
337_E	509_Q	1.655	1.00
319_I	324_V	1.641	1.00
117_R	121_Q	1.635	1.00
67_E	71_T	1.631	1.00
98_D	101_E	1.630	1.00
95_Y	98_D	1.617	1.00
156_F	159_E	1.605	1.00
117_R	120_K	1.594	1.00
90_M	93_Y	1.588	1.00
140_R	143_G	1.587	1.00
67_E	70_A	1.586	1.00
517_V	520_T	1.585	1.00
314_L	320_Y	1.581	1.00
106_K	110_S	1.571	1.00
118_Y	122_N	1.563	1.00
46_N	49_K	1.553	1.00
432_A	439_L	1.547	1.00
121_Q	124_R	1.543	1.00
47_G	53_I	1.543	1.00
175_W	295_M	1.530	1.00
109_N	112_H	1.529	1.00
259_L	262_L	1.525	1.00
253_H	276_H	1.523	1.00
97_A	100_L	1.522	1.00
94_T	97_A	1.514	1.00
221_K	249_I	1.511	1.00
425_I	443_K	1.508	1.00
86_G	89_I	1.503	1.00
64_L	67_E	1.502	1.00
47_G	51_N	1.485	1.00
418_I	483_I	1.485	1.00
48_V	51_N	1.481	1.00
96_L	99_V	1.472	1.00
143_G	148_E	1.469	1.00
481_V	513_Y	1.469	1.00
100_L	103_I	1.467	1.00
52_E	55_E	1.463	1.00
320_Y	324_V	1.446	1.00
223_A	226_K	1.439	1.00
54_V	58_E	1.437	1.00
111_E	114_F	1.428	1.00
65_S	68_D	1.425	1.00
388_R	391_N	1.422	1.00
58_E	61_D	1.414	1.00
59_D	62_V	1.409	1.00
217_M	249_I	1.402	1.00
210_V	250_T	1.400	1.00
112_H	115_K	1.394	1.00
113_R	116_I	1.394	1.00
55_E	59_D	1.389	1.00
84_E	88_I	1.385	1.00
142_N	145_E	1.381	1.00
111_E	115_K	1.373	1.00
470_G	474_I	1.362	1.00
438_L	452_V	1.358	1.00
56_I	59_D	1.353	1.00
59_D	65_S	1.349	1.00
63_R	67_E	1.346	1.00
269_L	291_A	1.346	1.00
322_K	327_L	1.346	1.00
248_T	266_F	1.343	1.00
85_A	90_M	1.331	1.00
172_I	198_K	1.331	1.00
285_I	289_L	1.322	1.00
410_I	483_I	1.320	1.00
200_I	232_P	1.316	1.00
48_V	55_E	1.312	1.00
282_F	285_I	1.310	1.00
135_L	138_K	1.304	1.00
92_P	96_L	1.301	1.00
408_D	434_R	1.289	1.00
62_V	68_D	1.285	1.00
438_L	455_T	1.282	1.00
321_Y	327_L	1.282	1.00
498_L	512_L	1.279	1.00
339_I	511_K	1.278	1.00
265_K	290_I	1.272	1.00
237_Y	258_H	1.270	1.00
61_D	65_S	1.268	1.00
407_L	483_I	1.265	1.00
138_K	141_E	1.265	1.00
63_R	69_I	1.263	1.00
52_E	61_D	1.253	1.00
83_I	86_G	1.253	1.00
56_I	66_Q	1.252	1.00
56_I	62_V	1.250	1.00
323_S	327_L	1.249	1.00
99_V	102_K	1.246	1.00
444_M	452_V	1.241	1.00
66_Q	70_A	1.236	1.00
101_E	104_N	1.234	1.00
91_K	96_L	1.234	1.00
122_N	125_F	1.232	1.00
64_L	70_A	1.228	1.00
392_E	395_K	1.227	1.00
318_I	327_L	1.222	1.00
139_L	142_N	1.221	1.00
136_L	139_L	1.218	1.00
450_K	454_V	1.217	1.00
152_S	155_E	1.206	1.00
216_Q	473_G	1.203	1.00
44_K	49_K	1.202	1.00
143_G	146_V	1.197	1.00
61_D	67_E	1.193	1.00
50_P	54_V	1.191	1.00
57_L	63_R	1.188	1.00
49_K	55_E	1.180	1.00
44_K	48_V	1.178	1.00
91_K	94_T	1.178	1.00
87_K	91_K	1.176	1.00
410_I	513_Y	1.169	1.00
53_I	57_L	1.168	1.00
56_I	61_D	1.166	1.00
51_N	56_I	1.165	1.00
72_L	76_L	1.162	1.00
455_T	459_M	1.162	1.00
93_Y	99_V	1.161	1.00
59_D	64_L	1.155	1.00
64_L	72_L	1.148	1.00
419_L	501_I	1.144	1.00
176_I	202_I	1.144	1.00
196_G	297_L	1.143	1.00
132_Y	135_L	1.142	1.00
109_N	113_R	1.139	1.00
115_K	119_D	1.138	1.00
460_N	463_V	1.137	1.00
65_S	71_T	1.135	1.00
323_S	326_E	1.134	1.00
250_T	255_A	1.127	1.00
64_L	68_D	1.127	1.00
91_K	97_A	1.114	1.00
127_V	130_M	1.112	1.00
60_Y	66_Q	1.112	1.00
88_I	92_P	1.111	1.00
283_K	287_E	1.109	1.00
60_Y	65_S	1.109	1.00
132_Y	136_L	1.107	1.00
119_D	123_R	1.107	1.00
234_I	249_I	1.106	1.00
101_E	105_G	1.106	1.00
157_E	160_F	1.106	1.00
45_R	50_P	1.105	1.00
141_E	144_L	1.105	1.00
71_T	76_L	1.104	1.00
57_L	64_L	1.100	1.00
93_Y	97_A	1.091	1.00
49_K	62_V	1.091	1.00
88_I	94_T	1.087	1.00
44_K	51_N	1.086	1.00
175_W	182_G	1.083	1.00
108_E	111_E	1.083	1.00
319_I	322_K	1.082	1.00
343_V	402_E	1.082	1.00
175_W	199_G	1.078	1.00
324_V	331_G	1.078	1.00
115_K	118_Y	1.076	1.00
337_E	511_K	1.075	1.00
316_G	319_I	1.073	1.00
44_K	50_P	1.072	1.00
99_V	103_I	1.066	1.00
63_R	68_D	1.061	1.00
110_S	113_R	1.061	1.00
308_H	312_F	1.060	1.00
120_K	123_R	1.059	1.00
197_I	247_I	1.058	1.00
201_D	228_T	1.058	1.00
53_I	60_Y	1.055	1.00
466_L	469_V	1.055	1.00
91_K	95_Y	1.051	1.00
130_M	135_L	1.045	1.00
53_I	59_D	1.044	1.00
58_E	63_R	1.041	1.00
46_N	54_V	1.041	1.00
118_Y	123_R	1.040	1.00
56_I	60_Y	1.039	1.00
59_D	66_Q	1.038	1.00
453_L	474_I	1.035	1.00
438_L	461_A	1.034	1.00
232_P	246_P	1.030	1.00
60_Y	70_A	1.028	1.00
219_Q	475_D	1.027	1.00
416_G	481_V	1.022	1.00
86_G	92_P	1.019	1.00
131_D	136_L	1.018	1.00
152_S	156_F	1.017	1.00
85_A	89_I	1.014	1.00
86_G	90_M	1.013	1.00
89_I	92_P	1.009	1.00
126_I	129_P	1.008	1.00
197_I	228_T	1.001	1.00
356_L	396_I	0.999	1.00
155_E	159_E	0.998	1.00
57_L	60_Y	0.994	1.00
435_Y	463_V	0.992	1.00
140_R	144_L	0.986	1.00
85_A	92_P	0.985	1.00
153_F	156_F	0.984	1.00
87_K	90_M	0.982	1.00
62_V	66_Q	0.982	1.00
59_D	68_D	0.981	1.00
282_F	286_A	0.981	1.00
46_N	52_E	0.981	1.00
271_V	277_L	0.980	1.00
50_P	56_I	0.980	1.00
307_K	312_F	0.977	1.00
322_K	328_A	0.976	1.00
64_L	69_I	0.974	1.00
57_L	66_Q	0.972	1.00
267_Y	292_P	0.971	1.00
320_Y	327_L	0.970	1.00
269_L	289_L	0.966	1.00
155_E	158_F	0.965	1.00
216_Q	219_Q	0.962	1.00
138_K	142_N	0.957	1.00
137_Q	141_E	0.955	1.00
410_I	515_I	0.952	1.00
62_V	70_A	0.950	1.00
316_G	320_Y	0.949	1.00
66_Q	71_T	0.948	1.00
442_G	449_R	0.943	1.00
237_Y	240_E	0.943	1.00
55_E	61_D	0.941	1.00
129_P	133_F	0.941	1.00
425_I	429_E	0.940	1.00
327_L	331_G	0.938	1.00
93_Y	98_D	0.937	1.00
211_T	251_T	0.935	1.00
221_K	236_L	0.932	1.00
60_Y	69_I	0.931	1.00
114_F	118_Y	0.928	1.00
484_I	498_L	0.926	1.00
534_I	538_E	0.923	1.00
88_I	95_Y	0.921	1.00
114_F	117_R	0.919	1.00
61_D	68_D	0.919	1.00
196_G	295_M	0.918	1.00
65_S	69_I	0.918	1.00
154_K	157_E	0.914	1.00
145_E	148_E	0.912	1.00
213_T	253_H	0.911	1.00
124_R	127_V	0.910	1.00
528_K	531_E	0.908	1.00
98_D	102_K	0.906	1.00
252_Y	271_V	0.905	1.00
420_I	463_V	0.905	1.00
67_E	72_L	0.904	1.00
483_I	515_I	0.904	1.00
347_L	351_K	0.902	1.00
281_K	284_L	0.901	1.00
143_G	147_K	0.899	1.00
53_I	65_S	0.899	1.00
314_L	328_A	0.898	1.00
454_V	458_T	0.896	1.00
58_E	62_V	0.896	1.00
200_I	224_I	0.895	1.00
97_A	104_N	0.895	1.00
69_I	76_L	0.894	1.00
113_R	117_R	0.893	1.00
353_Y	356_L	0.890	1.00
106_K	109_N	0.890	1.00
48_V	54_V	0.889	1.00
48_V	52_E	0.888	1.00
94_T	98_D	0.886	1.00
125_F	129_P	0.885	1.00
304_E	307_K	0.884	1.00
211_T	220_W	0.882	1.00
84_E	89_I	0.881	1.00
309_N	312_F	0.878	1.00
275_H	472_E	0.877	1.00
61_D	66_Q	0.877	1.00
131_D	134_N	0.877	1.00
50_P	55_E	0.873	0.99
279_A	282_F	0.870	0.99
56_I	68_D	0.868	0.99
117_R	122_N	0.868	0.99
114_F	119_D	0.867	0.99
45_R	51_N	0.863	0.99
57_L	71_T	0.862	0.99
345_L	353_Y	0.860	0.99
128_R	132_Y	0.858	0.99
121_Q	125_F	0.857	0.99
268_L	295_M	0.856	0.99
281_K	285_I	0.855	0.99
115_K	120_K	0.855	0.99
66_Q	72_L	0.852	0.99
96_L	100_L	0.849	0.99
83_I	88_I	0.848	0.99
54_V	61_D	0.847	0.99
448_E	451_R	0.846	0.99
89_I	94_T	0.844	0.99
131_D	142_N	0.842	0.99
86_G	93_Y	0.841	0.99
58_E	65_S	0.835	0.99
403_K	407_L	0.833	0.99
110_S	114_F	0.828	0.99
116_I	119_D	0.826	0.99
53_I	58_E	0.826	0.99
236_L	249_I	0.825	0.99
120_K	124_R	0.825	0.99
531_E	534_I	0.825	0.99
133_F	139_L	0.824	0.99
46_N	56_I	0.823	0.99
53_I	70_A	0.823	0.99
45_R	57_L	0.822	0.99
56_I	63_R	0.821	0.99
100_L	104_N	0.819	0.99
54_V	59_D	0.817	0.99
142_N	149_L	0.817	0.99
57_L	62_V	0.814	0.99
46_N	51_N	0.811	0.99
346_T	349_E	0.810	0.99
90_M	94_T	0.810	0.99
86_G	91_K	0.809	0.99
47_G	60_Y	0.809	0.99
238_Y	241_E	0.806	0.99
50_P	64_L	0.806	0.99
352_R	355_E	0.804	0.99
314_L	319_I	0.804	0.99
420_I	483_I	0.804	0.99
345_L	520_T	0.803	0.99
126_I	131_D	0.803	0.99
142_N	148_E	0.802	0.99
44_K	66_Q	0.801	0.99
102_K	105_G	0.801	0.99
166_E	170_E	0.799	0.99
324_V	329_K	0.797	0.99
61_D	70_A	0.797	0.99
196_G	199_G	0.795	0.99
65_S	72_L	0.794	0.99
350_R	354_N	0.794	0.99
140_R	149_L	0.793	0.99
84_E	98_D	0.793	0.99
317_G	320_Y	0.792	0.99
428_A	432_A	0.787	0.99
84_E	90_M	0.786	0.99
55_E	65_S	0.785	0.99
141_E	145_E	0.785	0.99
127_V	131_D	0.784	0.99
255_A	286_A	0.784	0.99
429_E	432_A	0.782	0.99
352_R	356_L	0.782	0.99
314_L	327_L	0.782	0.99
323_S	328_A	0.779	0.99
84_E	93_Y	0.778	0.99
47_G	63_R	0.777	0.99
125_F	128_R	0.775	0.99
123_R	126_I	0.772	0.99
89_I	93_Y	0.772	0.99
67_E	76_L	0.766	0.99
394_R	424_Y	0.764	0.99
174_N	182_G	0.761	0.99
139_L	143_G	0.761	0.99
44_K	58_E	0.760	0.99
216_Q	474_I	0.759	0.99
318_I	328_A	0.758	0.99
233_D	246_P	0.757	0.99
390_Y	521_P	0.755	0.99
44_K	60_Y	0.754	0.98
94_T	101_E	0.751	0.98
52_E	62_V	0.750	0.98
258_H	261_Q	0.750	0.98
141_E	146_V	0.750	0.98
138_K	143_G	0.748	0.98
47_G	62_V	0.747	0.98
407_L	485_V	0.744	0.98
342_K	518_S	0.744	0.98
52_E	59_D	0.744	0.98
113_R	118_Y	0.743	0.98
530_K	534_I	0.740	0.98
54_V	64_L	0.740	0.98
65_S	70_A	0.740	0.98
51_N	63_R	0.740	0.98
403_K	411_L	0.740	0.98
92_P	98_D	0.737	0.98
114_F	120_K	0.737	0.98
333_L	336_Y	0.736	0.98
345_L	517_V	0.735	0.98
57_L	61_D	0.735	0.98
94_T	100_L	0.733	0.98
488_T	494_F	0.733	0.98
85_A	91_K	0.729	0.98
313_S	318_I	0.728	0.98
62_V	67_E	0.727	0.98
54_V	67_E	0.723	0.98
45_R	60_Y	0.723	0.98
143_G	149_L	0.722	0.98
90_M	100_L	0.721	0.98
142_N	146_V	0.719	0.98
484_I	487_G	0.717	0.98
87_K	92_P	0.715	0.98
111_E	118_Y	0.714	0.98
313_S	316_G	0.714	0.98
44_K	64_L	0.714	0.98
49_K	57_L	0.711	0.98
90_M	95_Y	0.711	0.98
200_I	209_I	0.710	0.98
146_V	149_L	0.708	0.98
54_V	62_V	0.707	0.98
56_I	67_E	0.706	0.98
49_K	56_I	0.706	0.98
56_I	65_S	0.704	0.98
279_A	283_K	0.704	0.98
324_V	330_L	0.702	0.98
144_L	147_K	0.700	0.98
112_H	119_D	0.700	0.98
45_R	59_D	0.697	0.98
52_E	58_E	0.697	0.98
188_T	299_A	0.697	0.98
253_H	256_Y	0.696	0.97
52_E	56_I	0.694	0.97
222_E	226_K	0.694	0.97
321_Y	331_G	0.694	0.97
325_T	330_L	0.693	0.97
345_L	349_E	0.693	0.97
96_L	102_K	0.692	0.97
55_E	62_V	0.692	0.97
135_L	143_G	0.692	0.97
500_R	503_R	0.691	0.97
47_G	61_D	0.690	0.97
139_L	145_E	0.689	0.97
95_Y	100_L	0.688	0.97
127_V	132_Y	0.687	0.97
430_E	434_R	0.687	0.97
140_R	145_E	0.685	0.97
235_G	238_Y	0.684	0.97
130_M	134_N	0.683	0.97
46_N	53_I	0.683	0.97
116_I	121_Q	0.682	0.97
135_L	139_L	0.682	0.97
49_K	60_Y	0.681	0.97
97_A	102_K	0.681	0.97
426_D	429_E	0.681	0.97
48_V	56_I	0.680	0.97
320_Y	323_S	0.679	0.97
338_I	341_K	0.678	0.97
291_A	294_R	0.676	0.97
48_V	53_I	0.676	0.97
77_L	83_I	0.676	0.97
316_G	328_A	0.675	0.97
241_E	244_I	0.674	0.97
238_Y	242_K	0.674	0.97
159_E	162_G	0.674	0.97
245_R	248_T	0.670	0.97
63_R	70_A	0.669	0.97
259_L	263_F	0.668	0.97
215_E	469_V	0.668	0.97
88_I	93_Y	0.667	0.97
495_I	533_D	0.666	0.97
58_E	72_L	0.666	0.97
308_H	311_L	0.665	0.97
45_R	63_R	0.664	0.97
62_V	76_L	0.663	0.97
83_I	90_M	0.663	0.97
99_V	104_N	0.662	0.97
122_N	129_P	0.660	0.97
466_L	470_G	0.658	0.96
77_L	85_A	0.657	0.96
61_D	71_T	0.655	0.96
425_I	466_L	0.651	0.96
92_P	97_A	0.650	0.96
124_R	128_R	0.649	0.96
260_P	263_F	0.646	0.96
336_Y	340_Q	0.642	0.96
129_P	132_Y	0.642	0.96
59_D	70_A	0.640	0.96
540_M	543_S	0.639	0.96
133_F	138_K	0.639	0.96
53_I	63_R	0.639	0.96
44_K	56_I	0.638	0.96
213_T	446_K	0.638	0.96
112_H	117_R	0.638	0.96
321_Y	328_A	0.637	0.96
336_Y	339_I	0.636	0.96
388_R	392_E	0.635	0.96
49_K	58_E	0.634	0.96
354_N	357_L	0.634	0.96
128_R	133_F	0.634	0.96
118_Y	138_K	0.631	0.96
87_K	94_T	0.631	0.96
95_Y	99_V	0.630	0.95
49_K	69_I	0.629	0.95
380_D	383_A	0.628	0.95
48_V	63_R	0.628	0.95
344_R	350_R	0.625	0.95
327_L	330_L	0.624	0.95
132_Y	139_L	0.624	0.95
121_Q	132_Y	0.622	0.95
44_K	59_D	0.622	0.95
87_K	95_Y	0.621	0.95
387_M	391_N	0.619	0.95
407_L	420_I	0.616	0.95
62_V	69_I	0.616	0.95
45_R	55_E	0.615	0.95
123_R	128_R	0.615	0.95
57_L	69_I	0.613	0.95
115_K	126_I	0.613	0.95
284_L	288_G	0.613	0.95
236_L	240_E	0.611	0.95
417_K	478_D	0.610	0.95
60_Y	71_T	0.610	0.95
47_G	55_E	0.610	0.95
61_D	105_G	0.608	0.95
125_F	130_M	0.608	0.95
56_I	72_L	0.607	0.95
481_V	511_K	0.607	0.95
521_P	525_Q	0.607	0.95
126_I	132_Y	0.606	0.94
109_N	118_Y	0.605	0.94
46_N	60_Y	0.605	0.94
527_K	531_E	0.604	0.94
137_Q	145_E	0.604	0.94
318_I	326_E	0.603	0.94
94_T	99_V	0.598	0.94
240_E	243_R	0.598	0.94
403_K	410_I	0.597	0.94
90_M	96_L	0.595	0.94
118_Y	121_Q	0.593	0.94
501_I	510_A	0.592	0.94
62_V	72_L	0.592	0.94
382_S	390_Y	0.592	0.94
136_L	143_G	0.591	0.94
118_Y	125_F	0.591	0.94
319_I	328_A	0.590	0.94
534_I	537_F	0.590	0.94
49_K	61_D	0.589	0.94
88_I	102_K	0.589	0.94
208_L	269_L	0.588	0.94
134_N	139_L	0.588	0.94
51_N	55_E	0.587	0.93
533_D	537_F	0.587	0.93
131_D	135_L	0.586	0.93
418_I	481_V	0.586	0.93
141_E	148_E	0.585	0.93
106_K	111_E	0.584	0.93
51_N	60_Y	0.583	0.93
411_L	420_I	0.581	0.93
207_T	268_L	0.581	0.93
525_Q	528_K	0.578	0.93
56_I	64_L	0.578	0.93
137_Q	143_G	0.577	0.93
52_E	68_D	0.577	0.93
58_E	64_L	0.575	0.93
54_V	57_L	0.575	0.93
425_I	428_A	0.574	0.93
124_R	132_Y	0.574	0.93
86_G	94_T	0.573	0.93
44_K	54_V	0.573	0.93
440_L	470_G	0.571	0.93
54_V	68_D	0.571	0.93
52_E	63_R	0.569	0.92
319_I	323_S	0.569	0.92
125_F	143_G	0.569	0.92
47_G	57_L	0.569	0.92
453_L	457_K	0.568	0.92
56_I	71_T	0.568	0.92
215_E	440_L	0.568	0.92
137_Q	140_R	0.567	0.92
58_E	66_Q	0.566	0.92
51_N	71_T	0.566	0.92
114_F	122_N	0.565	0.92
112_H	125_F	0.563	0.92
54_V	66_Q	0.563	0.92
468_T	493_Q	0.561	0.92
105_G	108_E	0.561	0.92
303_R	307_K	0.560	0.92
44_K	53_I	0.559	0.92
56_I	70_A	0.558	0.92
138_K	144_L	0.558	0.92
91_K	100_L	0.557	0.92
224_I	249_I	0.556	0.92
183_V	311_L	0.555	0.91
319_I	327_L	0.555	0.91
83_I	92_P	0.554	0.91
156_F	161_N	0.552	0.91
285_I	288_G	0.551	0.91
480_N	511_K	0.551	0.91
109_N	115_K	0.550	0.91
423_Q	427_Q	0.549	0.91
108_E	112_H	0.548	0.91
274_V	298_S	0.544	0.91
87_K	93_Y	0.543	0.91
134_N	140_R	0.541	0.90
92_P	103_I	0.541	0.90
88_I	96_L	0.540	0.90
314_L	323_S	0.540	0.90
284_L	287_E	0.539	0.90
403_K	486_T	0.539	0.90
268_L	293_Y	0.539	0.90
404_M	485_V	0.538	0.90
52_E	67_E	0.538	0.90
527_K	534_I	0.537	0.90
130_M	133_F	0.534	0.90
97_A	101_E	0.533	0.90
132_Y	140_R	0.531	0.90
85_A	93_Y	0.529	0.89
387_M	392_E	0.528	0.89
47_G	65_S	0.528	0.89
340_Q	343_V	0.526	0.89
200_I	270_I	0.525	0.89
113_R	124_R	0.523	0.89
115_K	124_R	0.522	0.89
53_I	64_L	0.521	0.89
120_K	125_F	0.521	0.89
55_E	68_D	0.520	0.89
391_N	395_K	0.519	0.89
221_K	234_I	0.519	0.89
162_G	227_F	0.517	0.88
130_M	145_E	0.516	0.88
45_R	70_A	0.516	0.88
343_V	406_A	0.515	0.88
45_R	53_I	0.515	0.88
88_I	101_E	0.514	0.88
530_K	533_D	0.514	0.88
275_H	496_Q	0.514	0.88
130_M	136_L	0.512	0.88
129_P	141_E	0.512	0.88
90_M	99_V	0.510	0.88
53_I	69_I	0.509	0.88
89_I	95_Y	0.509	0.88
213_T	251_T	0.508	0.87
51_N	61_D	0.507	0.87
451_R	454_V	0.507	0.87
51_N	58_E	0.506	0.87
405_K	408_D	0.505	0.87
339_I	342_K	0.503	0.87
527_K	530_K	0.502	0.87
121_Q	135_L	0.502	0.87
135_L	142_N	0.502	0.87
381_E	385_E	0.501	0.87
140_R	148_E	0.501	0.87
428_A	439_L	0.501	0.87
93_Y	100_L	0.501	0.87
452_V	461_A	0.500	0.87
484_I	514_E	0.500	0.87

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3mwyW	2	0.902	100	0.381	Contact Map
1z3iX	4	0.7786	100	0.396	Contact Map
1z63A	1	0.6969	100	0.404	Contact Map
2fwrA	1	0.775	100	0.449	Contact Map
1wp9A	1	0.6697	100	0.48	Contact Map
4a2qA	1	0.8076	100	0.488	Contact Map
4qu4A	1	0.7477	100	0.491	Contact Map
2ykgA	1	0.6425	100	0.493	Contact Map
4a2pA	1	0.6134	100	0.495	Contact Map
4a2wA	1	0.7768	100	0.495	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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