Q97ZF2 - SULSO - GREMLIN Contacts

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Q97ZF2 - tRNA-splicing ligase RtcB

UniProt:	Q97ZF2	Sequences: MQINITRVSTYEWRIDKGAQECMKVPVTIFADDVLIEKMKQDMTLRQATNVACLPGVQESIYVLPDGHQGYGFPIGGIAATAIEEGGVVSPGGIGYDINCGVRLLRTNLDYKDVKPKLAQLVEELHRNVPSGVGSEGKVKLTYQQLDQVLAEGVAWAVDKGFGWKEDMNHMEQRGSWELADPSKVSPIAKQRGASQLGTLGAGNHFLEIQVVDKIFDPQIAKAIGVDHEGQVMVMVHTGSRGLGHQVASDYLQIMERAMKKYNIQLPDRELAAVPFESREGQDYFHAMASGANFAWTNRQLITHWTRESFGRVFGVDPEKLDLSIVYDVAHNIAKIEEYVIGGERKKVLVHRKGATRAFPPGSPEIPADHRNIGQIVLIPGSMGTASYVMAGIPEGRRTWFTAPHGAGRWMSREAAVRNYPANVVVETLAEKGIVVRAATRRVVAEEAPGAYKDVDRVAKVAHEVKIAKLVMRLRPIGVTKG	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	482 (384)
Sequences:	1390 (836)
Seq/√Len:	42.7

ECOLI - RTCB
HALSA - Q9HPV7
SULSO - Q97ZF2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
338_E	347_K	4.986	1.00
415_A	419_N	4.739	1.00
415_A	418_R	4.489	1.00
86_G	346_K	3.922	1.00
206_F	380_P	3.703	1.00
238_T	302_I	3.624	1.00
104_L	389_V	3.522	1.00
48_A	63_V	3.341	1.00
111_Y	211_V	3.302	1.00
211_V	477_I	3.087	1.00
414_E	418_R	3.061	1.00
391_A	469_K	2.982	1.00
262_Y	275_P	2.896	1.00
403_A	468_A	2.864	1.00
258_A	280_E	2.850	1.00
44_T	67_G	2.786	1.00
357_R	375_Q	2.744	1.00
245_H	249_S	2.734	1.00
422_A	445_A	2.724	1.00
454_D	457_R	2.716	1.00
48_A	61_I	2.690	1.00
57_V	61_I	2.687	1.00
112_K	230_G	2.551	1.00
50_N	268_D	2.539	1.00
63_V	67_G	2.527	1.00
184_K	283_D	2.478	1.00
124_E	312_R	2.466	1.00
125_L	207_L	2.418	1.00
391_A	471_V	2.390	1.00
123_E	437_R	2.386	1.00
103_R	328_D	2.385	1.00
129_V	306_T	2.368	1.00
147_D	190_K	2.318	1.00
43_M	46_R	2.302	1.00
41_Q	44_T	2.300	1.00
378_L	389_V	2.279	1.00
386_A	473_R	2.278	1.00
133_V	202_A	2.274	1.00
128_N	309_S	2.270	1.00
357_R	372_N	2.264	1.00
211_V	475_R	2.226	1.00
150_L	243_L	2.200	1.00
234_V	306_T	2.181	1.00
382_S	385_T	2.156	1.00
89_V	285_F	2.141	0.99
58_Q	348_V	2.102	0.99
247_V	291_G	2.087	0.99
420_Y	448_A	2.070	0.99
460_K	470_L	2.060	0.99
242_G	245_H	2.042	0.99
111_Y	230_G	2.031	0.99
75_I	94_I	1.996	0.99
254_I	280_E	1.984	0.99
129_V	302_I	1.980	0.99
258_A	262_Y	1.964	0.99
105_L	303_T	1.934	0.99
393_I	469_K	1.918	0.99
210_Q	235_M	1.916	0.99
111_Y	115_K	1.898	0.99
125_L	306_T	1.873	0.99
122_V	478_G	1.872	0.99
124_E	127_R	1.858	0.99
336_I	347_K	1.853	0.99
101_G	299_R	1.836	0.98
234_V	310_F	1.805	0.98
125_L	129_V	1.800	0.98
106_R	324_S	1.733	0.98
277_E	282_Q	1.724	0.98
428_T	450_G	1.694	0.97
457_R	460_K	1.693	0.97
258_A	261_K	1.690	0.97
326_V	389_V	1.672	0.97
417_V	442_R	1.672	0.97
110_D	231_Q	1.653	0.97
105_L	323_L	1.635	0.97
43_M	415_A	1.613	0.96
285_F	289_A	1.612	0.96
232_V	477_I	1.610	0.96
111_Y	477_I	1.597	0.96
278_S	281_G	1.578	0.96
108_N	321_L	1.565	0.96
106_R	326_V	1.557	0.96
255_M	274_V	1.510	0.95
207_L	306_T	1.510	0.95
51_V	69_Q	1.499	0.95
395_E	398_R	1.496	0.94
234_V	307_R	1.491	0.94
148_Q	151_A	1.490	0.94
142_T	145_Q	1.455	0.94
51_V	93_G	1.445	0.93
384_G	387_S	1.445	0.93
425_V	448_A	1.428	0.93
200_L	207_L	1.426	0.93
420_Y	424_V	1.406	0.92
256_E	269_R	1.403	0.92
385_T	388_Y	1.399	0.92
51_V	61_I	1.375	0.92
460_K	464_E	1.362	0.91
429_L	479_V	1.355	0.91
420_Y	450_G	1.351	0.91
43_M	69_Q	1.346	0.91
436_V	444_V	1.344	0.91
389_V	474_L	1.344	0.91
350_V	357_R	1.338	0.90
261_K	280_E	1.337	0.90
89_V	324_S	1.332	0.90
99_N	296_W	1.320	0.90
206_F	294_F	1.308	0.89
74_P	77_G	1.285	0.88
376_I	471_V	1.275	0.88
109_L	113_D	1.273	0.88
108_N	231_Q	1.271	0.88
117_K	120_Q	1.265	0.88
372_N	375_Q	1.261	0.88
73_F	93_G	1.257	0.87
104_L	233_M	1.239	0.87
58_Q	346_K	1.224	0.86
288_M	334_A	1.223	0.86
168_M	171_M	1.219	0.86
336_I	349_L	1.206	0.85
460_K	465_V	1.205	0.85
276_F	281_G	1.204	0.85
42_D	46_R	1.203	0.85
407_A	449_P	1.198	0.85
399_T	467_I	1.195	0.85
420_Y	425_V	1.185	0.84
151_A	182_P	1.183	0.84
292_A	333_I	1.181	0.84
228_H	472_M	1.180	0.84
114_V	314_F	1.177	0.84
106_R	325_I	1.176	0.84
167_D	171_M	1.169	0.83
154_V	171_M	1.167	0.83
124_E	313_V	1.166	0.83
279_R	283_D	1.165	0.83
276_F	349_L	1.162	0.83
136_E	199_T	1.155	0.82
91_P	206_F	1.153	0.82
99_N	330_A	1.143	0.82
146_L	150_L	1.142	0.82
122_V	435_V	1.139	0.82
171_M	325_I	1.130	0.81
386_A	456_D	1.114	0.80
45_L	49_T	1.108	0.80
251_Y	287_A	1.107	0.80
381_G	387_S	1.097	0.79
119_A	123_E	1.093	0.79
259_M	264_I	1.093	0.79
376_I	391_A	1.093	0.79
211_V	232_V	1.092	0.79
261_K	264_I	1.089	0.79
425_V	428_T	1.082	0.78
270_E	382_S	1.076	0.78
110_D	228_H	1.075	0.78
99_N	333_I	1.071	0.77
73_F	79_A	1.070	0.77
334_A	479_V	1.055	0.76
248_A	252_L	1.055	0.76
106_R	231_Q	1.052	0.76
264_I	280_E	1.046	0.76
168_M	172_E	1.036	0.75
108_N	322_D	1.033	0.75
105_L	236_V	1.033	0.75
129_V	309_S	1.032	0.75
107_T	323_L	1.028	0.74
39_M	44_T	1.025	0.74
211_V	230_G	1.025	0.74
388_Y	455_V	1.021	0.74
149_V	197_L	1.020	0.74
48_A	67_G	1.018	0.74
388_Y	456_D	1.017	0.74
356_T	377_V	1.013	0.73
395_E	466_K	1.011	0.73
335_K	357_R	1.010	0.73
118_L	478_G	1.009	0.73
51_V	79_A	1.008	0.73
142_T	146_L	1.004	0.73
67_G	403_A	1.003	0.73
103_R	327_Y	1.003	0.73
124_E	309_S	0.998	0.72
42_D	45_L	0.996	0.72
249_S	253_Q	0.985	0.71
42_D	49_T	0.985	0.71
118_L	435_V	0.983	0.71
254_I	283_D	0.983	0.71
149_V	153_G	0.979	0.71
411_M	416_A	0.977	0.70
409_R	413_R	0.976	0.70
40_K	45_L	0.975	0.70
192_R	246_Q	0.973	0.70
276_F	282_Q	0.972	0.70
87_G	276_F	0.969	0.70
276_F	285_F	0.958	0.69
149_V	154_V	0.954	0.69
104_L	326_V	0.951	0.68
259_M	266_L	0.949	0.68
411_M	419_N	0.948	0.68
246_Q	250_D	0.945	0.68
236_V	302_I	0.945	0.68
54_L	80_A	0.940	0.68
168_M	297_T	0.935	0.67
34_V	457_R	0.933	0.67
377_V	390_M	0.932	0.67
197_L	301_L	0.930	0.67
119_A	435_V	0.930	0.67
228_H	231_Q	0.930	0.67
150_L	153_G	0.928	0.66
262_Y	280_E	0.927	0.66
424_V	428_T	0.922	0.66
104_L	235_M	0.921	0.66
56_G	90_S	0.920	0.66
127_R	309_S	0.920	0.66
131_S	480_T	0.916	0.65
146_L	149_V	0.914	0.65
247_V	288_M	0.913	0.65
397_R	401_F	0.909	0.65
128_N	312_R	0.908	0.65
251_Y	283_D	0.907	0.65
70_G	95_G	0.906	0.65
51_V	73_F	0.904	0.64
294_F	380_P	0.900	0.64
248_A	270_E	0.895	0.64
131_S	302_I	0.891	0.63
327_Y	376_I	0.885	0.63
447_E	452_Y	0.883	0.63
181_D	286_H	0.879	0.62
337_E	350_V	0.877	0.62
147_D	154_V	0.876	0.62
260_K	269_R	0.872	0.62
167_D	293_N	0.870	0.61
74_P	351_H	0.869	0.61
104_L	474_L	0.863	0.61
147_D	151_A	0.860	0.61
141_L	445_A	0.859	0.60
301_L	305_W	0.857	0.60
45_L	389_V	0.856	0.60
235_M	387_S	0.851	0.60
122_V	126_H	0.850	0.60
277_E	281_G	0.846	0.59
134_G	242_G	0.845	0.59
310_F	314_F	0.838	0.59
310_F	323_L	0.838	0.59
42_D	69_Q	0.833	0.58
384_G	449_P	0.831	0.58
339_Y	400_W	0.829	0.58
455_V	459_A	0.828	0.58
320_K	323_L	0.827	0.58
89_V	349_L	0.824	0.57
99_N	292_A	0.821	0.57
155_A	168_M	0.815	0.56
186_S	189_A	0.813	0.56
210_Q	351_H	0.805	0.55
264_I	275_P	0.805	0.55
64_L	77_G	0.802	0.55
99_N	238_T	0.802	0.55
447_E	481_K	0.801	0.55
240_S	244_G	0.800	0.55
243_L	247_V	0.799	0.55
62_Y	455_V	0.799	0.55
40_K	380_P	0.796	0.55
427_E	460_K	0.794	0.54
285_F	336_I	0.793	0.54
39_M	410_W	0.790	0.54
393_I	468_A	0.789	0.54
264_I	273_A	0.788	0.54
96_Y	245_H	0.787	0.54
79_A	93_G	0.786	0.54
238_T	382_S	0.781	0.53
248_A	349_L	0.781	0.53
81_T	88_V	0.779	0.53
96_Y	272_A	0.778	0.53
423_N	428_T	0.777	0.53
304_H	308_E	0.777	0.53
388_Y	468_A	0.775	0.53
121_L	310_F	0.773	0.52
78_I	93_G	0.772	0.52
91_P	380_P	0.772	0.52
285_F	349_L	0.769	0.52
167_D	172_E	0.763	0.52
206_F	235_M	0.762	0.51
424_V	427_E	0.760	0.51
109_L	232_V	0.758	0.51
189_A	192_R	0.756	0.51
260_K	263_N	0.753	0.51
75_I	93_G	0.751	0.50
73_F	77_G	0.751	0.50
171_M	199_T	0.751	0.50
115_K	415_A	0.748	0.50
423_N	427_E	0.748	0.50
112_K	229_E	0.748	0.50
373_I	393_I	0.747	0.50
339_Y	348_V	0.746	0.50
125_L	209_I	0.745	0.50
124_E	128_N	0.743	0.50
459_A	468_A	0.743	0.50
373_I	391_A	0.740	0.49
129_V	399_T	0.739	0.49
96_Y	249_S	0.737	0.49
251_Y	291_G	0.736	0.49
134_G	202_A	0.734	0.49
136_E	195_S	0.733	0.49
424_V	448_A	0.731	0.48
67_G	382_S	0.729	0.48
134_G	196_Q	0.729	0.48
91_P	294_F	0.729	0.48
51_V	81_T	0.728	0.48
68_H	95_G	0.727	0.48
263_N	275_P	0.726	0.48
56_G	87_G	0.724	0.48
166_E	324_S	0.723	0.48
94_I	295_A	0.722	0.48
52_A	61_I	0.721	0.48
89_V	308_E	0.718	0.47
67_G	294_F	0.718	0.47
209_I	306_T	0.718	0.47
272_A	306_T	0.716	0.47
131_S	196_Q	0.714	0.47
386_A	455_V	0.713	0.47
261_K	285_F	0.712	0.47
126_H	480_T	0.709	0.46
243_L	290_S	0.708	0.46
303_T	325_I	0.704	0.46
65_P	97_D	0.704	0.46
142_T	150_L	0.703	0.46
149_V	297_T	0.703	0.46
438_A	444_V	0.702	0.46
230_G	308_E	0.697	0.45
404_P	464_E	0.696	0.45
44_T	69_Q	0.695	0.45
393_I	397_R	0.693	0.45
404_P	459_A	0.693	0.45
422_A	426_V	0.692	0.45
426_V	444_V	0.691	0.45
307_R	314_F	0.690	0.45
121_L	147_D	0.688	0.44
209_I	234_V	0.688	0.44
252_L	399_T	0.686	0.44
154_V	297_T	0.685	0.44
447_E	453_K	0.683	0.44
187_P	191_Q	0.681	0.44
165_K	169_N	0.681	0.44
46_R	50_N	0.679	0.44
445_A	450_G	0.678	0.44
210_Q	384_G	0.677	0.43
128_N	308_E	0.676	0.43
189_A	246_Q	0.676	0.43
67_G	194_A	0.674	0.43
153_G	156_W	0.671	0.43
189_A	250_D	0.668	0.43
77_G	351_H	0.666	0.42
235_M	380_P	0.666	0.42
72_G	271_L	0.665	0.42
251_Y	280_E	0.664	0.42
334_A	349_L	0.664	0.42
106_R	475_R	0.663	0.42
333_I	380_P	0.662	0.42
302_I	306_T	0.661	0.42
247_V	290_S	0.659	0.42
241_R	284_Y	0.659	0.42
266_L	273_A	0.655	0.41
185_V	189_A	0.655	0.41
96_Y	270_E	0.654	0.41
133_V	136_E	0.653	0.41
45_L	414_E	0.653	0.41
70_G	76_G	0.651	0.41
206_F	333_I	0.651	0.41
80_A	357_R	0.651	0.41
41_Q	294_F	0.646	0.41
253_Q	256_E	0.641	0.40
351_H	436_V	0.636	0.40
54_L	72_G	0.636	0.40
101_G	200_L	0.635	0.40
73_F	271_L	0.635	0.40
107_T	232_V	0.635	0.40
421_P	445_A	0.633	0.39
92_G	245_H	0.633	0.39
315_G	320_K	0.630	0.39
89_V	323_L	0.630	0.39
303_T	307_R	0.630	0.39
210_Q	385_T	0.630	0.39
60_S	400_W	0.629	0.39
114_V	127_R	0.628	0.39
152_E	417_V	0.626	0.39
231_Q	389_V	0.621	0.38
124_E	308_E	0.620	0.38
235_M	384_G	0.620	0.38
120_Q	123_E	0.619	0.38
91_P	291_G	0.619	0.38
452_Y	481_K	0.619	0.38
58_Q	86_G	0.618	0.38
311_G	321_L	0.618	0.38
40_K	206_F	0.618	0.38
292_A	479_V	0.617	0.38
186_S	250_D	0.616	0.38
199_T	279_R	0.616	0.38
248_A	251_Y	0.616	0.38
381_G	384_G	0.616	0.38
114_V	311_G	0.614	0.38
308_E	397_R	0.614	0.38
429_L	436_V	0.614	0.38
283_D	286_H	0.613	0.38
254_I	257_R	0.612	0.37
126_H	302_I	0.611	0.37
170_H	286_H	0.610	0.37
351_H	356_T	0.609	0.37
193_G	479_V	0.608	0.37
404_P	456_D	0.608	0.37
307_R	310_F	0.607	0.37
307_R	311_G	0.606	0.37
130_P	271_L	0.606	0.37
299_R	477_I	0.606	0.37
89_V	199_T	0.606	0.37
42_D	151_A	0.606	0.37
166_E	199_T	0.602	0.37
155_A	279_R	0.600	0.36
114_V	480_T	0.600	0.36
53_C	57_V	0.596	0.36
253_Q	419_N	0.595	0.36
63_V	305_W	0.595	0.36
44_T	48_A	0.594	0.36
46_R	49_T	0.593	0.36
154_V	157_A	0.593	0.36
262_Y	279_R	0.592	0.36
384_G	407_A	0.592	0.36
141_L	145_Q	0.591	0.36
61_I	71_Y	0.591	0.36
258_A	264_I	0.591	0.36
257_R	427_E	0.590	0.36
78_I	458_V	0.589	0.35
434_I	479_V	0.588	0.35
280_E	283_D	0.588	0.35
130_P	200_L	0.588	0.35
453_K	481_K	0.587	0.35
131_S	202_A	0.586	0.35
378_L	400_W	0.586	0.35
253_Q	257_R	0.586	0.35
154_V	158_V	0.584	0.35
74_P	356_T	0.583	0.35
123_E	324_S	0.582	0.35
189_A	193_G	0.582	0.35
91_P	255_M	0.582	0.35
260_K	265_Q	0.580	0.35
56_G	275_P	0.580	0.35
100_C	204_N	0.580	0.35
152_E	414_E	0.579	0.35
190_K	243_L	0.578	0.35
122_V	437_R	0.578	0.35
61_I	93_G	0.578	0.35
46_R	138_K	0.577	0.34
99_N	335_K	0.573	0.34
330_A	333_I	0.572	0.34
264_I	346_K	0.572	0.34
112_K	312_R	0.570	0.34
193_G	334_A	0.567	0.34
103_R	303_T	0.567	0.34
78_I	355_A	0.566	0.34
210_Q	386_A	0.565	0.33
146_L	153_G	0.565	0.33
73_F	446_E	0.564	0.33
209_I	232_V	0.564	0.33
296_W	300_Q	0.563	0.33
281_G	303_T	0.563	0.33
75_I	255_M	0.562	0.33
256_E	260_K	0.561	0.33
148_Q	257_R	0.559	0.33
329_V	333_I	0.558	0.33
148_Q	423_N	0.557	0.33
186_S	246_Q	0.557	0.33
186_S	193_G	0.556	0.33
47_Q	70_G	0.556	0.33
276_F	336_I	0.556	0.33
89_V	372_N	0.555	0.33
381_G	388_Y	0.554	0.32
447_E	451_A	0.554	0.32
313_V	372_N	0.554	0.32
99_N	399_T	0.553	0.32
135_S	460_K	0.552	0.32
281_G	356_T	0.552	0.32
97_D	353_K	0.552	0.32
442_R	454_D	0.552	0.32
114_V	478_G	0.551	0.32
34_V	39_M	0.551	0.32
96_Y	446_E	0.550	0.32
182_P	186_S	0.550	0.32
200_L	299_R	0.549	0.32
141_L	149_V	0.549	0.32
443_V	448_A	0.547	0.32
411_M	415_A	0.547	0.32
113_D	232_V	0.546	0.32
181_D	184_K	0.546	0.32
210_Q	476_P	0.546	0.32
196_Q	412_S	0.546	0.32
146_L	382_S	0.545	0.32
228_H	233_M	0.545	0.32
168_M	472_M	0.544	0.32
429_L	438_A	0.544	0.32
456_D	459_A	0.542	0.32
461_V	467_I	0.540	0.31
62_Y	99_N	0.539	0.31
99_N	104_L	0.538	0.31
57_V	78_I	0.537	0.31
206_F	479_V	0.536	0.31
89_V	391_A	0.536	0.31
255_M	272_A	0.535	0.31
260_K	308_E	0.534	0.31
413_R	447_E	0.534	0.31
236_V	285_F	0.533	0.31
409_R	447_E	0.533	0.31
420_Y	443_V	0.532	0.31
291_G	343_G	0.532	0.31
236_V	303_T	0.532	0.31
261_K	279_R	0.530	0.31
339_Y	401_F	0.530	0.31
129_V	207_L	0.530	0.31
206_F	248_A	0.529	0.30
429_L	446_E	0.529	0.30
121_L	229_E	0.529	0.30
147_D	182_P	0.528	0.30
353_K	409_R	0.528	0.30
435_V	480_T	0.527	0.30
259_M	262_Y	0.527	0.30
144_Q	150_L	0.527	0.30
145_Q	149_V	0.527	0.30
148_Q	152_E	0.526	0.30
429_L	448_A	0.526	0.30
254_I	258_A	0.526	0.30
374_G	391_A	0.526	0.30
91_P	259_M	0.525	0.30
165_K	434_I	0.525	0.30
67_G	398_R	0.524	0.30
254_I	419_N	0.522	0.30
170_H	460_K	0.522	0.30
109_L	231_Q	0.521	0.30
414_E	417_V	0.520	0.30
209_I	427_E	0.519	0.30
296_W	333_I	0.519	0.30
69_Q	270_E	0.518	0.30
354_G	409_R	0.518	0.30
111_Y	415_A	0.518	0.30
309_S	313_V	0.518	0.30
289_A	296_W	0.517	0.29
269_R	465_V	0.516	0.29
63_V	71_Y	0.516	0.29
63_V	270_E	0.515	0.29
80_A	193_G	0.515	0.29
238_T	303_T	0.515	0.29
386_A	429_L	0.514	0.29
248_A	445_A	0.513	0.29
210_Q	382_S	0.513	0.29
127_R	138_K	0.511	0.29
63_V	102_V	0.511	0.29
343_G	411_M	0.511	0.29
149_V	152_E	0.510	0.29
248_A	380_P	0.510	0.29
49_T	52_A	0.510	0.29
433_G	475_R	0.508	0.29
353_K	447_E	0.508	0.29
122_V	292_A	0.508	0.29
109_L	314_F	0.507	0.29
111_Y	232_V	0.506	0.29
412_S	420_Y	0.506	0.29
386_A	479_V	0.506	0.29
457_R	461_V	0.505	0.29
197_L	246_Q	0.505	0.29
332_N	353_K	0.504	0.28
286_H	290_S	0.504	0.28
209_I	422_A	0.504	0.28
281_G	351_H	0.504	0.28
118_L	480_T	0.503	0.28
71_Y	96_Y	0.503	0.28
271_L	337_E	0.502	0.28
134_G	137_G	0.502	0.28
349_L	479_V	0.502	0.28
241_R	353_K	0.501	0.28
294_F	403_A	0.501	0.28
407_A	455_V	0.500	0.28

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4dwrB	3	0.9917	100	0.054	Contact Map
2epgA	1	0.9108	100	0.079	Contact Map
3b47A	2	0.2427	61.9	0.977	Contact Map
3b42A	2	0.2552	51.8	0.978	Contact Map
1pbyA	1	0.168	32.6	0.981	Contact Map
4mk6A	2	0.1515	22.9	0.982	Contact Map
4x90A	4	0.2012	15.3	0.983	Contact Map
3vseA	1	0.2697	15	0.984	Contact Map
3m92A	2	0.0954	13.2	0.984	Contact Map
1w2lA	1	0.168	10.5	0.985	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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