Q97ZD1 - SULSO - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

Q97ZD1 - Sugar phosphate nucleotydyl transferase

UniProt:	Q97ZD1	Sequences: MMTKWDISDVKVIIPIGGEATRLRPLTIETSKAAVRLLNRPLIEYTILELAKQGIKEFIFGVKGYVNYRSLFDLFKEGIGFSARYKIKPRVHFKYQPRVDSIGNADSVRINIEYYDINEPIVVVQGDNIFKLDITKALEFHESKSSLMTIVLKKYEGDLSEFGVADTTGDLAIRKFVEKPKRREDAPSDLINTGIYILSPEIRKIFKSNDVKEMYKMGKMDFGKDIIPYLINKGYPVYGYPMKEIWFDIGTPERYLDAMVTLLHTLSDSEIGGIRIDPNRRIFVQGTSPDSRKRRREIQRKFKKGLIKIEGDALIGRHCQIGDDTYIEESNIDNFTMIGKGVKIVRSAIMDRGYIGDNVHIENSIIARHVEIRSNNEKPVRIINSVIADDVIVGEGTEIINSRIYPHKFINAGSRIHDTILT	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	422 (332)
Sequences:	7432 (4763)
Seq/√Len:	261.4

ECOLI - GLGC GLMU RMLA1 RMLA2
BACSU - GLMU GLGC GLGD
HALSA - Q9HSZ9 Q9HSZ8 Q9HS61
SULSO - Q97ZD1 Q980H9 Q7LXK9 Q980D4 Q97XG0 Q7LXE7

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
327_I	330_S	3.993	1.00
361_I	364_S	3.755	1.00
154_K	189_D	3.289	1.00
344_I	347_S	3.286	1.00
141_H	149_T	3.176	1.00
345_V	362_E	3.125	1.00
329_E	346_R	2.889	1.00
349_I	355_I	2.755	1.00
328_E	345_V	2.754	1.00
168_T	172_A	2.724	1.00
356_G	374_S	2.705	1.00
154_K	241_P	2.642	1.00
339_G	357_D	2.549	1.00
335_F	352_R	2.478	1.00
139_E	143_S	2.459	1.00
318_H	335_F	2.445	1.00
346_R	363_N	2.431	1.00
330_S	344_I	2.332	1.00
40_R	48_L	2.325	1.00
340_K	357_D	2.312	1.00
12_V	55_I	2.302	1.00
357_D	374_S	2.291	1.00
299_Q	302_F	2.267	1.00
147_L	199_S	2.221	1.00
137_A	151_V	2.196	1.00
310_E	328_E	2.196	1.00
12_V	50_L	2.193	1.00
334_N	351_D	2.130	1.00
152_L	239_G	2.085	1.00
140_F	144_K	2.083	1.00
316_G	334_N	2.069	1.00
326_Y	343_K	2.060	1.00
317_R	334_N	2.052	1.00
166_D	188_S	2.044	1.00
166_D	175_K	2.042	1.00
173_I	239_G	2.040	1.00
320_Q	337_M	2.016	1.00
366_I	372_I	2.016	1.00
309_I	313_A	2.014	1.00
312_D	329_E	2.007	1.00
332_I	338_I	1.987	1.00
205_I	209_N	1.986	1.00
146_S	238_Y	1.951	1.00
168_T	174_R	1.911	1.00
47_I	58_F	1.875	1.00
349_I	353_G	1.862	1.00
341_G	358_N	1.852	1.00
137_A	197_I	1.831	1.00
332_I	336_T	1.829	1.00
44_E	74_L	1.815	1.00
121_I	200_P	1.812	1.00
342_V	359_V	1.798	1.00
333_D	351_D	1.781	1.00
323_D	340_K	1.767	1.00
138_L	197_I	1.764	1.00
172_A	236_P	1.739	1.00
172_A	238_Y	1.701	1.00
322_G	340_K	1.687	1.00
50_L	124_V	1.653	1.00
140_F	240_Y	1.649	1.00
30_T	36_R	1.635	1.00
43_I	75_F	1.614	1.00
337_M	354_Y	1.605	1.00
144_K	238_Y	1.601	1.00
322_G	339_G	1.599	1.00
366_I	370_V	1.585	1.00
205_I	233_K	1.580	1.00
102_I	106_D	1.576	1.00
308_K	326_Y	1.571	1.00
204_K	207_K	1.567	1.00
343_K	360_H	1.561	1.00
336_T	353_G	1.543	1.00
319_C	336_T	1.542	1.00
319_C	332_I	1.531	1.00
135_T	139_E	1.520	1.00
299_Q	317_R	1.506	1.00
120_P	199_S	1.497	1.00
298_I	302_F	1.484	1.00
353_G	370_V	1.481	1.00
203_R	207_K	1.462	1.00
117_I	120_P	1.438	1.00
339_G	356_G	1.431	1.00
200_P	204_K	1.431	1.00
339_G	354_Y	1.425	1.00
137_A	149_T	1.419	1.00
354_Y	371_E	1.419	1.00
123_V	198_L	1.418	1.00
147_L	236_P	1.410	1.00
147_L	235_Y	1.401	1.00
122_V	197_I	1.395	1.00
91_V	95_Y	1.390	1.00
68_Y	72_F	1.379	1.00
202_I	206_F	1.379	1.00
152_L	165_A	1.376	1.00
209_N	233_K	1.375	1.00
229_Y	233_K	1.365	1.00
120_P	142_E	1.363	1.00
44_E	48_L	1.349	1.00
315_I	319_C	1.347	1.00
130_F	133_D	1.326	1.00
300_R	317_R	1.324	1.00
245_I	261_T	1.323	1.00
249_I	258_A	1.316	1.00
112_I	204_K	1.311	1.00
42_L	249_I	1.308	1.00
166_D	177_V	1.303	1.00
59_I	96_Q	1.288	1.00
359_V	374_S	1.256	1.00
148_M	230_L	1.247	1.00
347_S	361_I	1.246	1.00
173_I	237_V	1.236	1.00
116_D	204_K	1.235	1.00
62_V	68_Y	1.221	1.00
247_F	261_T	1.217	1.00
167_T	239_G	1.206	1.00
140_F	238_Y	1.186	1.00
302_F	319_C	1.185	1.00
106_D	110_I	1.180	1.00
11_K	57_E	1.175	1.00
318_H	334_N	1.169	1.00
325_T	342_V	1.164	1.00
43_I	71_L	1.163	1.00
230_L	235_Y	1.157	1.00
34_A	74_L	1.151	1.00
136_K	139_E	1.150	1.00
38_L	262_L	1.138	1.00
297_E	314_L	1.124	1.00
344_I	349_I	1.120	1.00
133_D	136_K	1.110	1.00
57_E	92_H	1.101	1.00
30_T	70_S	1.099	1.00
109_R	112_I	1.098	1.00
306_L	323_D	1.097	1.00
304_K	323_D	1.096	1.00
331_N	348_A	1.096	1.00
253_E	257_D	1.095	1.00
106_D	109_R	1.084	1.00
303_K	309_I	1.082	1.00
163_G	178_E	1.077	1.00
314_L	331_N	1.076	1.00
321_I	325_T	1.074	1.00
303_K	307_I	1.071	1.00
202_I	235_Y	1.068	1.00
327_I	332_I	1.066	1.00
11_K	115_Y	1.059	1.00
345_V	360_H	1.052	1.00
295_R	312_D	1.049	1.00
219_K	225_D	1.048	1.00
70_S	73_D	1.045	1.00
58_F	91_V	1.045	1.00
29_E	318_H	1.044	1.00
167_T	190_L	1.044	1.00
192_N	196_Y	1.042	1.00
164_V	191_I	1.039	1.00
59_I	114_Y	1.036	1.00
304_K	307_I	1.034	1.00
202_I	205_I	1.023	1.00
152_L	190_L	1.021	1.00
231_I	237_V	1.021	1.00
108_V	123_V	1.021	1.00
198_L	226_I	1.021	1.00
206_F	233_K	1.020	1.00
91_V	94_K	1.019	1.00
37_L	259_M	1.015	1.00
140_F	143_S	1.010	1.00
20_A	32_K	1.001	1.00
44_E	78_G	0.998	1.00
150_I	173_I	0.995	1.00
33_A	126_G	0.991	1.00
339_G	342_V	0.988	1.00
302_F	334_N	0.980	1.00
358_N	374_S	0.974	1.00
112_I	208_S	0.969	1.00
358_N	375_N	0.967	1.00
148_M	198_L	0.966	1.00
333_D	336_T	0.963	1.00
43_I	60_F	0.963	1.00
31_S	70_S	0.963	1.00
158_D	161_E	0.960	1.00
124_V	134_I	0.957	1.00
131_K	245_I	0.956	1.00
352_R	369_H	0.955	1.00
177_V	187_P	0.953	1.00
336_T	349_I	0.952	1.00
76_K	95_Y	0.951	1.00
125_Q	128_N	0.949	1.00
344_I	361_I	0.949	1.00
207_K	210_D	0.947	1.00
165_A	173_I	0.944	1.00
177_V	182_R	0.943	1.00
68_Y	97_P	0.940	1.00
41_P	44_E	0.939	1.00
228_P	232_N	0.934	1.00
306_L	322_G	0.933	1.00
343_K	358_N	0.928	1.00
44_E	75_F	0.926	1.00
356_G	371_E	0.926	1.00
353_G	366_I	0.921	1.00
247_F	257_D	0.920	1.00
215_Y	225_D	0.919	1.00
69_R	73_D	0.917	1.00
336_T	351_D	0.917	1.00
102_I	220_M	0.916	1.00
37_L	42_L	0.911	1.00
322_G	337_M	0.902	1.00
45_Y	262_L	0.898	1.00
72_F	97_P	0.897	1.00
136_K	140_F	0.897	1.00
22_R	32_K	0.894	1.00
36_R	41_P	0.893	1.00
112_I	207_K	0.891	1.00
119_E	200_P	0.889	1.00
304_K	322_G	0.888	1.00
251_T	254_R	0.885	1.00
310_E	326_Y	0.885	1.00
202_I	207_K	0.879	1.00
60_F	75_F	0.872	1.00
32_K	127_D	0.870	1.00
39_N	314_L	0.869	1.00
313_A	327_I	0.868	1.00
336_T	355_I	0.866	1.00
341_G	357_D	0.861	1.00
342_V	374_S	0.859	1.00
14_I	47_I	0.852	1.00
13_I	59_I	0.852	1.00
304_K	320_Q	0.850	0.99
209_N	229_Y	0.846	0.99
336_T	350_M	0.846	0.99
342_V	356_G	0.846	0.99
371_E	374_S	0.845	0.99
48_L	52_K	0.844	0.99
260_V	263_L	0.843	0.99
13_I	121_I	0.842	0.99
171_L	241_P	0.841	0.99
101_S	106_D	0.838	0.99
150_I	165_A	0.837	0.99
145_S	199_S	0.836	0.99
92_H	95_Y	0.836	0.99
41_P	74_L	0.833	0.99
190_L	239_G	0.829	0.99
34_A	70_S	0.828	0.99
201_E	205_I	0.828	0.99
316_G	319_C	0.827	0.99
53_Q	134_I	0.827	0.99
359_V	372_I	0.824	0.99
342_V	358_N	0.823	0.99
155_Y	191_I	0.821	0.99
122_V	138_L	0.818	0.99
298_I	315_I	0.818	0.99
319_C	333_D	0.814	0.99
355_I	361_I	0.811	0.99
147_L	202_I	0.811	0.99
148_M	227_I	0.808	0.99
304_K	308_K	0.808	0.99
215_Y	218_G	0.807	0.99
255_Y	350_M	0.806	0.99
338_I	342_V	0.805	0.99
30_T	367_A	0.802	0.99
106_D	220_M	0.802	0.99
356_G	373_R	0.801	0.99
266_L	270_E	0.801	0.99
69_R	72_F	0.798	0.99
296_R	309_I	0.796	0.99
210_D	218_G	0.796	0.99
46_T	124_V	0.795	0.99
361_I	366_I	0.795	0.99
186_A	189_D	0.794	0.99
206_F	230_L	0.790	0.99
342_V	357_D	0.788	0.99
18_G	32_K	0.786	0.99
122_V	134_I	0.785	0.99
350_M	365_I	0.784	0.99
45_Y	48_L	0.781	0.99
136_K	243_K	0.778	0.99
357_D	375_N	0.776	0.99
41_P	45_Y	0.772	0.99
278_P	281_R	0.770	0.99
204_K	208_S	0.769	0.99
348_A	365_I	0.762	0.99
206_F	209_N	0.760	0.99
166_D	174_R	0.760	0.99
148_M	237_V	0.759	0.99
55_I	138_L	0.758	0.99
163_G	179_K	0.757	0.99
229_Y	232_N	0.755	0.99
190_L	241_P	0.751	0.99
264_H	268_D	0.750	0.99
342_V	355_I	0.750	0.99
92_H	96_Q	0.748	0.99
247_F	258_A	0.748	0.99
112_I	116_D	0.744	0.99
59_I	115_Y	0.741	0.99
267_S	271_I	0.738	0.99
31_S	67_N	0.734	0.99
315_I	321_I	0.734	0.99
295_R	298_I	0.730	0.98
127_D	248_D	0.727	0.98
203_R	206_F	0.727	0.98
220_M	225_D	0.726	0.98
219_K	224_K	0.724	0.98
221_D	224_K	0.721	0.98
50_L	55_I	0.717	0.98
153_K	191_I	0.716	0.98
49_E	134_I	0.710	0.98
256_L	279_N	0.709	0.98
49_E	53_Q	0.704	0.98
267_S	276_I	0.704	0.98
153_K	246_W	0.704	0.98
139_E	142_E	0.699	0.98
319_C	334_N	0.698	0.98
51_A	91_V	0.696	0.98
138_L	142_E	0.695	0.98
95_Y	98_R	0.695	0.98
61_G	107_S	0.692	0.98
306_L	310_E	0.691	0.98
27_T	35_V	0.691	0.98
13_I	108_V	0.686	0.98
59_I	111_N	0.685	0.98
51_A	78_G	0.683	0.98
203_R	209_N	0.682	0.98
14_I	50_L	0.680	0.98
116_D	208_S	0.678	0.98
146_S	236_P	0.678	0.98
353_G	367_A	0.676	0.97
199_S	202_I	0.671	0.97
198_L	202_I	0.670	0.97
18_G	22_R	0.670	0.97
76_K	80_G	0.669	0.97
22_R	33_A	0.663	0.97
182_R	187_P	0.663	0.97
299_Q	334_N	0.661	0.97
57_E	94_K	0.660	0.97
129_I	133_D	0.660	0.97
62_V	95_Y	0.658	0.97
23_L	35_V	0.658	0.97
10_V	138_L	0.657	0.97
51_A	58_F	0.657	0.97
325_T	340_K	0.657	0.97
296_R	299_Q	0.655	0.97
367_A	370_V	0.649	0.97
20_A	33_A	0.648	0.97
156_E	189_D	0.647	0.97
11_K	59_I	0.647	0.97
266_L	269_S	0.646	0.97
67_N	70_S	0.645	0.97
150_I	237_V	0.644	0.97
151_V	195_I	0.642	0.97
141_H	199_S	0.642	0.97
104_N	127_D	0.641	0.97
310_E	313_A	0.638	0.96
15_P	107_S	0.633	0.96
343_K	357_D	0.629	0.96
333_D	348_A	0.629	0.96
343_K	362_E	0.629	0.96
92_H	97_P	0.628	0.96
47_I	75_F	0.624	0.96
165_A	190_L	0.624	0.96
305_G	308_K	0.621	0.96
215_Y	229_Y	0.620	0.96
93_F	96_Q	0.617	0.96
42_L	46_T	0.617	0.96
149_T	197_I	0.616	0.96
91_V	97_P	0.614	0.96
222_F	226_I	0.614	0.96
14_I	46_T	0.613	0.96
182_R	186_A	0.612	0.96
38_L	45_Y	0.612	0.96
49_E	132_L	0.611	0.95
112_I	203_R	0.610	0.95
47_I	93_F	0.609	0.95
80_G	93_F	0.607	0.95
155_Y	158_D	0.606	0.95
124_V	195_I	0.603	0.95
338_I	344_I	0.603	0.95
298_I	301_K	0.601	0.95
198_L	222_F	0.601	0.95
161_E	254_R	0.598	0.95
130_F	195_I	0.597	0.95
305_G	323_D	0.597	0.95
36_R	333_D	0.595	0.95
332_I	349_I	0.593	0.95
346_R	362_E	0.593	0.95
307_I	310_E	0.593	0.95
155_Y	189_D	0.588	0.94
297_E	300_R	0.588	0.94
202_I	230_L	0.586	0.94
93_F	98_R	0.585	0.94
201_E	204_K	0.584	0.94
109_R	207_K	0.584	0.94
11_K	118_N	0.582	0.94
17_G	61_G	0.582	0.94
54_G	135_T	0.581	0.94
62_V	72_F	0.581	0.94
327_I	338_I	0.579	0.94
75_F	78_G	0.578	0.94
145_S	236_P	0.578	0.94
356_G	359_V	0.577	0.94
205_I	208_S	0.576	0.94
307_I	323_D	0.575	0.94
71_L	95_Y	0.575	0.94
20_A	248_D	0.572	0.94
51_A	79_I	0.570	0.93
267_S	270_E	0.568	0.93
98_R	106_D	0.568	0.93
120_P	197_I	0.565	0.93
332_I	344_I	0.564	0.93
313_A	330_S	0.562	0.93
152_L	241_P	0.562	0.93
321_I	332_I	0.561	0.93
259_M	331_N	0.561	0.93
297_E	301_K	0.561	0.93
360_H	363_N	0.558	0.93
307_I	321_I	0.558	0.93
136_K	240_Y	0.557	0.93
335_F	351_D	0.557	0.93
75_F	93_F	0.556	0.93
150_I	196_Y	0.556	0.93
319_C	335_F	0.555	0.93
26_L	255_Y	0.554	0.93
16_I	60_F	0.553	0.92
351_D	368_R	0.552	0.92
325_T	338_I	0.552	0.92
353_G	368_R	0.552	0.92
117_I	204_K	0.551	0.92
153_K	193_T	0.550	0.92
312_D	328_E	0.547	0.92
206_F	210_D	0.546	0.92
261_T	265_T	0.545	0.92
204_K	209_N	0.545	0.92
133_D	245_I	0.545	0.92
326_Y	345_V	0.545	0.92
11_K	117_I	0.544	0.92
20_A	127_D	0.544	0.92
252_P	256_L	0.543	0.92
73_D	76_K	0.543	0.92
276_I	282_I	0.543	0.92
359_V	373_R	0.540	0.92
18_G	104_N	0.540	0.92
210_D	220_M	0.540	0.92
16_I	71_L	0.539	0.91
325_T	328_E	0.539	0.91
108_V	222_F	0.539	0.91
312_D	330_S	0.538	0.91
295_R	299_Q	0.537	0.91
119_E	199_S	0.536	0.91
163_G	176_F	0.536	0.91
76_K	79_I	0.535	0.91
264_H	267_S	0.534	0.91
333_D	350_M	0.533	0.91
339_G	343_K	0.533	0.91
276_I	284_V	0.533	0.91
125_Q	196_Y	0.532	0.91
178_E	192_N	0.532	0.91
149_T	240_Y	0.531	0.91
261_T	264_H	0.528	0.91
48_L	78_G	0.527	0.91
255_Y	259_M	0.524	0.90
307_I	319_C	0.522	0.90
315_I	327_I	0.522	0.90
152_L	173_I	0.522	0.90
262_L	271_I	0.522	0.90
151_V	193_T	0.521	0.90
179_K	250_G	0.521	0.90
33_A	71_L	0.521	0.90
307_I	327_I	0.520	0.90
18_G	103_G	0.519	0.90
24_R	28_I	0.519	0.90
34_A	43_I	0.519	0.90
202_I	210_D	0.517	0.90
180_P	217_M	0.516	0.90
349_I	366_I	0.515	0.90
146_S	149_T	0.515	0.90
205_I	229_Y	0.515	0.90
62_V	71_L	0.515	0.90
39_N	316_G	0.513	0.89
61_G	98_R	0.513	0.89
155_Y	159_L	0.512	0.89
11_K	121_I	0.511	0.89
154_K	190_L	0.511	0.89
302_F	315_I	0.511	0.89
70_S	74_L	0.510	0.89
226_I	229_Y	0.510	0.89
159_L	186_A	0.510	0.89
357_D	360_H	0.509	0.89
142_E	197_I	0.507	0.89
164_V	180_P	0.506	0.89
53_Q	135_T	0.506	0.89
306_L	340_K	0.504	0.89
174_R	177_V	0.504	0.89
145_S	201_E	0.504	0.89
198_L	203_R	0.504	0.89
21_T	24_R	0.503	0.88
312_D	331_N	0.503	0.88
304_K	325_T	0.502	0.88
104_N	108_V	0.501	0.88
277_D	280_R	0.500	0.88
35_V	252_P	0.500	0.88
319_C	351_D	0.500	0.88

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3brkX	2	0.8768	100	0.404	Contact Map
1yp2A	4	0.9005	100	0.405	Contact Map
2ggoA	3	0.872	100	0.406	Contact Map
4g3qA	3	0.9147	100	0.427	Contact Map
1hm9A	3	0.91	100	0.43	Contact Map
2v0hA	3	0.9076	100	0.445	Contact Map
4fceA	3	0.8957	100	0.454	Contact Map
2icyA	1	0.7844	100	0.567	Contact Map
2i5kA	5	0.763	100	0.581	Contact Map
1iimA	3	0.6777	100	0.6	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.011 seconds.