Q97ZB5 - SULSO - GREMLIN Contacts

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Q97ZB5 - Amino acid specific permease

UniProt:	Q97ZB5	Sequences: MDEEKKNVSELRKGVLGTWLVASYGIAANAPIAVATLYFVGLAGLVGGAMPLTVILSYLIYATTLIVIYEWSKEIAASYGYVAMIKKGLGSSLASFTVGYGYIYQYLVAGTAGFGILGIASFIYLISPSIASSMPWLWAAIVIIVTIEITTIMWLGVKPGGLLNLVIGLISIGFLIITSIVLIAGAKNSILPFTAVPVNNNWALVLTAMIFGVTTFGGATTPIGVAEEAKVPKSTLPKALLLTFGILGVGLILNSYAQTIVYGINNMFNYANLPDPMIVIYSKYFNPAIVYMLIILVAFMFNSSALAFATSGSRMIFGMARDGVLYPKVFSKVNKYGVPGNAIILTGIVTGALSLISGYILGPLEASIFLITFGSFYVALGHLFAALGLIVRKVKMRTANIAKHVVIPIISILLYIAVIYFGTYPAPAFPLNIAVYAAWAILLIHIITYYVIKSRFPDRIKKFGDYSL	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	468 (420)
Sequences:	24870 (16574)
Seq/√Len:	808.7

ECOLI - LYSP AROP ANSP YIFK GABP PLAP MMUP PROY POTE ADIC FRLA PHEP CYCA PUUP GADC YCAM YBAT YJEM YGJI YJEH ARCD CADB TNAB
BACSU - YBXG YBGF ROCE HUTM ROCC YTNA YDGF GABP AAPA YHDG YVBW ASPP YFNA STET YBEC YCGH ARCD YECA YDAO GERBB GERAB YNDE GERKB
HALSA - Q9HHU7 Q9HQB3 Q9HSL5
SULSO - Q97ZB5 Q7LXI7 Q97XM0 Q97U05 Q97WS3 Q97X49 Q97Z63 Q97U33 Q97WD4 Q97VA6 Q97VA8 Q97VR4 Q97Y76 Q97YN3 Q97YX9 Q97U39

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
150_T	347_G	4.233	1.00
329_V	341_N	4.203	1.00
391_V	395_K	3.150	1.00
332_K	341_N	2.965	1.00
58_Y	248_G	2.937	1.00
234_S	238_K	2.810	1.00
17_G	230_K	2.736	1.00
397_R	401_I	2.732	1.00
229_A	235_T	2.599	1.00
82_V	322_D	2.537	1.00
182_L	257_A	2.512	1.00
320_A	331_S	2.509	1.00
99_G	319_M	2.486	1.00
329_V	332_K	2.452	1.00
231_V	234_S	2.452	1.00
12_R	15_V	2.431	1.00
143_I	351_G	2.398	1.00
334_N	340_G	2.395	1.00
22_A	242_L	2.392	1.00
383_L	412_I	2.374	1.00
70_E	393_K	2.313	1.00
180_I	184_A	2.284	1.00
18_T	242_L	2.262	1.00
288_A	292_M	2.231	1.00
227_E	321_R	2.126	1.00
279_V	282_S	2.114	1.00
344_I	348_I	2.088	1.00
317_F	321_R	2.076	1.00
86_K	94_A	2.068	1.00
154_W	340_G	2.045	1.00
228_E	314_R	2.043	1.00
147_I	351_G	2.039	1.00
21_V	229_A	2.023	1.00
18_T	235_T	2.016	1.00
150_T	343_I	2.015	1.00
151_T	155_L	2.015	1.00
399_A	402_A	1.985	1.00
89_L	391_V	1.963	1.00
158_K	162_L	1.951	1.00
418_V	421_F	1.949	1.00
18_T	22_A	1.933	1.00
143_I	354_S	1.918	1.00
238_K	242_L	1.909	1.00
142_V	354_S	1.891	1.00
169_L	173_G	1.879	1.00
186_A	189_S	1.866	1.00
323_G	328_K	1.865	1.00
103_I	346_T	1.859	1.00
67_V	386_A	1.853	1.00
86_K	91_S	1.852	1.00
330_F	345_L	1.840	1.00
17_G	20_L	1.830	1.00
59_L	63_T	1.825	1.00
11_L	333_V	1.824	1.00
415_Y	418_V	1.821	1.00
113_G	116_I	1.820	1.00
447_I	451_V	1.810	1.00
266_N	283_K	1.790	1.00
398_T	401_I	1.782	1.00
192_P	195_A	1.768	1.00
441_I	445_H	1.753	1.00
409_I	413_L	1.748	1.00
279_V	283_K	1.740	1.00
42_L	50_M	1.740	1.00
231_V	235_T	1.724	1.00
411_S	415_Y	1.716	1.00
185_G	189_S	1.707	1.00
185_G	190_I	1.706	1.00
89_L	387_L	1.701	1.00
397_R	403_K	1.700	1.00
147_I	347_G	1.680	1.00
20_L	165_L	1.675	1.00
153_M	306_L	1.629	1.00
85_I	98_V	1.625	1.00
334_N	338_V	1.624	1.00
198_V	201_N	1.621	1.00
241_L	245_G	1.619	1.00
193_F	196_V	1.608	1.00
22_A	246_I	1.607	1.00
146_T	350_T	1.596	1.00
391_V	394_V	1.589	1.00
173_G	177_I	1.584	1.00
439_W	443_L	1.580	1.00
406_V	410_I	1.576	1.00
16_L	20_L	1.567	1.00
98_V	384_F	1.551	1.00
53_T	208_A	1.546	1.00
154_W	344_I	1.543	1.00
411_S	414_L	1.526	1.00
187_K	190_I	1.524	1.00
25_G	243_T	1.524	1.00
49_A	205_V	1.524	1.00
336_Y	340_G	1.519	1.00
12_R	337_G	1.502	1.00
263_G	266_N	1.498	1.00
282_S	290_V	1.489	1.00
188_N	191_L	1.469	1.00
112_A	115_G	1.467	1.00
316_I	342_A	1.456	1.00
341_N	345_L	1.450	1.00
155_L	336_Y	1.447	1.00
186_A	190_I	1.418	1.00
399_A	403_K	1.416	1.00
225_V	310_T	1.415	1.00
245_G	249_V	1.404	1.00
445_H	448_T	1.398	1.00
174_F	296_L	1.387	1.00
90_G	93_L	1.384	1.00
386_A	411_S	1.384	1.00
328_K	331_S	1.382	1.00
127_S	130_I	1.380	1.00
387_L	391_V	1.377	1.00
192_P	196_V	1.376	1.00
143_I	147_I	1.370	1.00
150_T	344_I	1.365	1.00
403_K	407_I	1.364	1.00
57_S	212_G	1.356	1.00
312_G	346_T	1.353	1.00
65_L	244_F	1.352	1.00
183_I	257_A	1.343	1.00
231_V	238_K	1.341	1.00
123_I	141_I	1.338	1.00
407_I	411_S	1.331	1.00
431_L	434_A	1.331	1.00
110_G	350_T	1.330	1.00
291_Y	295_I	1.329	1.00
146_T	347_G	1.325	1.00
328_K	332_K	1.325	1.00
11_L	317_F	1.322	1.00
20_L	161_G	1.321	1.00
332_K	340_G	1.321	1.00
404_H	408_P	1.320	1.00
85_I	384_F	1.319	1.00
420_Y	424_Y	1.317	1.00
417_A	421_F	1.316	1.00
282_S	287_P	1.315	1.00
317_F	333_V	1.315	1.00
75_I	87_K	1.311	1.00
232_P	237_P	1.310	1.00
313_S	343_I	1.294	1.00
418_V	422_G	1.287	1.00
100_Y	445_H	1.278	1.00
89_L	93_L	1.276	1.00
413_L	417_A	1.274	1.00
59_L	410_I	1.274	1.00
440_A	444_I	1.274	1.00
179_S	253_L	1.272	1.00
65_L	240_L	1.268	1.00
149_I	305_A	1.262	1.00
78_S	227_E	1.255	1.00
64_T	386_A	1.253	1.00
285_F	289_I	1.252	1.00
430_P	433_I	1.244	1.00
29_N	247_L	1.244	1.00
450_Y	454_S	1.241	1.00
172_I	176_I	1.238	1.00
411_S	418_V	1.237	1.00
397_R	400_N	1.235	1.00
185_G	260_I	1.229	1.00
63_T	410_I	1.229	1.00
18_T	238_K	1.227	1.00
235_T	238_K	1.222	1.00
139_A	143_I	1.220	1.00
128_P	131_A	1.216	1.00
387_L	412_I	1.213	1.00
83_A	87_K	1.207	1.00
186_A	191_L	1.207	1.00
103_I	316_I	1.206	1.00
249_V	253_L	1.203	1.00
88_G	388_G	1.200	1.00
66_I	241_L	1.197	1.00
16_L	21_V	1.192	1.00
51_P	256_Y	1.188	1.00
49_A	198_V	1.185	1.00
400_N	403_K	1.176	1.00
182_L	261_V	1.176	1.00
405_V	409_I	1.174	1.00
42_L	46_V	1.168	1.00
416_I	420_Y	1.164	1.00
404_H	407_I	1.153	1.00
19_W	23_S	1.151	1.00
430_P	434_A	1.151	1.00
16_L	161_G	1.149	1.00
26_I	246_I	1.148	1.00
187_K	191_L	1.138	1.00
92_S	452_I	1.132	1.00
198_V	202_W	1.127	1.00
316_I	325_L	1.126	1.00
25_G	222_P	1.121	1.00
448_T	451_V	1.119	1.00
152_I	163_L	1.118	1.00
445_H	449_Y	1.117	1.00
443_L	447_I	1.117	1.00
77_A	83_A	1.116	1.00
21_V	239_A	1.116	1.00
178_T	182_L	1.115	1.00
321_R	331_S	1.110	1.00
412_I	416_I	1.109	1.00
273_L	276_P	1.109	1.00
419_I	422_G	1.106	1.00
67_V	408_P	1.105	1.00
230_K	235_T	1.102	1.00
68_I	81_Y	1.096	1.00
408_P	412_I	1.093	1.00
446_I	450_Y	1.088	1.00
406_V	409_I	1.087	1.00
163_L	167_I	1.086	1.00
341_N	344_I	1.081	1.00
70_E	73_K	1.075	1.00
112_A	116_I	1.059	1.00
394_V	405_V	1.057	1.00
24_Y	225_V	1.046	1.00
150_T	154_W	1.039	1.00
72_S	84_M	1.039	1.00
55_I	252_I	1.039	1.00
162_L	166_V	1.036	1.00
333_V	337_G	1.027	1.00
438_A	442_L	1.027	1.00
273_L	279_V	1.025	1.00
397_R	402_A	1.025	1.00
164_N	306_L	1.014	1.00
348_I	352_A	1.013	1.00
383_L	416_I	1.009	1.00
411_S	421_F	1.009	1.00
432_N	435_V	1.007	1.00
261_V	280_I	1.007	1.00
440_A	443_L	1.003	1.00
144_I	148_E	1.002	1.00
420_Y	423_T	1.001	1.00
177_I	181_V	0.994	1.00
398_T	403_K	0.993	1.00
140_A	144_I	0.986	1.00
217_G	378_V	0.984	1.00
30_A	33_A	0.982	1.00
390_I	409_I	0.982	1.00
407_I	414_L	0.982	1.00
125_L	128_P	0.980	1.00
435_V	438_A	0.975	1.00
451_V	454_S	0.974	1.00
185_G	188_N	0.970	1.00
414_L	418_V	0.968	1.00
60_I	414_L	0.967	1.00
389_L	408_P	0.967	1.00
96_F	100_Y	0.966	1.00
226_A	236_L	0.964	1.00
176_I	180_I	0.963	1.00
404_H	411_S	0.961	1.00
119_I	145_V	0.960	1.00
147_I	151_T	0.959	1.00
408_P	422_G	0.959	1.00
15_V	230_K	0.958	1.00
197_P	201_N	0.955	1.00
167_I	303_S	0.955	1.00
263_G	283_K	0.945	1.00
157_V	310_T	0.944	1.00
154_W	338_V	0.937	1.00
77_A	87_K	0.937	1.00
148_E	302_N	0.937	1.00
119_I	298_A	0.934	1.00
390_I	408_P	0.934	1.00
444_I	447_I	0.931	1.00
26_I	247_L	0.931	1.00
137_L	140_A	0.930	1.00
408_P	411_S	0.921	1.00
415_Y	422_G	0.914	1.00
401_I	404_H	0.913	1.00
23_S	165_L	0.913	1.00
383_L	387_L	0.900	1.00
82_V	318_G	0.900	1.00
414_L	421_F	0.898	1.00
220_T	224_G	0.890	1.00
286_N	289_I	0.888	1.00
256_Y	260_I	0.887	1.00
127_S	131_A	0.876	1.00
179_S	183_I	0.875	1.00
154_W	334_N	0.875	1.00
309_A	347_G	0.873	1.00
51_P	259_T	0.872	1.00
178_T	281_Y	0.871	1.00
396_M	401_I	0.868	1.00
407_I	418_V	0.866	1.00
179_S	257_A	0.865	1.00
15_V	158_K	0.864	1.00
149_I	306_L	0.860	1.00
79_Y	83_A	0.860	1.00
396_M	399_A	0.860	1.00
418_V	423_T	0.856	1.00
20_L	162_L	0.851	1.00
172_I	250_G	0.851	1.00
242_L	246_I	0.843	1.00
100_Y	325_L	0.843	1.00
340_G	344_I	0.842	1.00
30_A	35_A	0.842	1.00
436_Y	439_W	0.841	1.00
411_S	424_Y	0.841	1.00
58_Y	216_F	0.837	1.00
48_G	259_T	0.837	1.00
248_G	252_I	0.835	1.00
120_A	123_I	0.834	1.00
415_Y	419_I	0.833	1.00
437_A	440_A	0.829	1.00
421_F	424_Y	0.829	1.00
79_Y	82_V	0.823	1.00
71_W	389_L	0.820	1.00
411_S	422_G	0.820	1.00
330_F	341_N	0.820	1.00
406_V	411_S	0.819	1.00
325_L	330_F	0.817	1.00
221_T	311_S	0.814	1.00
86_K	322_D	0.811	1.00
202_W	206_L	0.810	1.00
193_F	197_P	0.809	1.00
189_S	192_P	0.808	1.00
141_I	144_I	0.808	1.00
414_L	423_T	0.806	1.00
421_F	425_P	0.804	1.00
63_T	67_V	0.804	1.00
429_F	432_N	0.804	1.00
85_I	93_L	0.803	1.00
409_I	412_I	0.803	1.00
448_T	452_I	0.801	1.00
440_A	447_I	0.801	1.00
19_W	165_L	0.800	1.00
62_A	66_I	0.798	1.00
199_N	202_W	0.796	1.00
63_T	407_I	0.794	1.00
275_D	279_V	0.792	1.00
43_A	50_M	0.792	1.00
171_S	300_M	0.791	1.00
146_T	354_S	0.791	1.00
207_T	211_F	0.783	1.00
179_S	254_N	0.781	1.00
404_H	415_Y	0.777	1.00
139_A	354_S	0.777	1.00
162_L	165_L	0.776	1.00
404_H	414_L	0.773	1.00
55_I	59_L	0.773	1.00
90_G	453_K	0.772	1.00
445_H	452_I	0.772	1.00
449_Y	452_I	0.770	1.00
190_I	260_I	0.765	1.00
373_F	377_Y	0.764	1.00
151_T	154_W	0.762	1.00
18_T	239_A	0.760	1.00
120_A	141_I	0.760	1.00
149_I	309_A	0.759	1.00
389_L	393_K	0.757	1.00
85_I	388_G	0.756	1.00
52_L	56_L	0.756	1.00
444_I	448_T	0.756	1.00
155_L	159_P	0.756	1.00
198_V	205_V	0.756	1.00
347_G	351_G	0.755	1.00
11_L	314_R	0.754	1.00
22_A	239_A	0.752	1.00
102_Y	106_Y	0.751	1.00
414_L	417_A	0.750	1.00
11_L	228_E	0.750	1.00
422_G	425_P	0.746	1.00
116_I	119_I	0.745	1.00
388_G	392_R	0.744	1.00
408_P	423_T	0.743	1.00
436_Y	440_A	0.743	1.00
201_N	204_L	0.743	1.00
62_A	241_L	0.742	1.00
276_P	280_I	0.742	1.00
334_N	337_G	0.742	1.00
348_I	351_G	0.741	1.00
287_P	291_Y	0.739	1.00
113_G	117_L	0.738	1.00
448_T	453_K	0.736	1.00
183_I	253_L	0.734	1.00
446_I	449_Y	0.734	1.00
288_A	291_Y	0.729	1.00
109_A	374_G	0.727	1.00
390_I	394_V	0.726	1.00
93_L	384_F	0.726	1.00
30_A	171_S	0.722	1.00
441_I	448_T	0.719	1.00
52_L	205_V	0.717	1.00
417_A	420_Y	0.716	1.00
82_V	86_K	0.715	1.00
399_A	404_H	0.715	1.00
217_G	382_H	0.715	1.00
139_A	142_V	0.714	1.00
396_M	403_K	0.713	1.00
161_G	165_L	0.712	1.00
52_L	55_I	0.708	1.00
15_V	157_V	0.708	1.00
335_K	340_G	0.707	1.00
89_L	388_G	0.707	1.00
30_A	34_V	0.707	1.00
435_V	439_W	0.704	1.00
411_S	425_P	0.704	1.00
320_A	330_F	0.703	1.00
441_I	444_I	0.702	1.00
43_A	46_V	0.701	1.00
31_P	251_L	0.700	1.00
31_P	34_V	0.699	1.00
415_Y	421_F	0.699	1.00
401_I	407_I	0.698	1.00
402_A	408_P	0.698	1.00
29_N	243_T	0.698	1.00
74_E	397_R	0.696	1.00
121_S	124_Y	0.694	1.00
71_W	84_M	0.694	1.00
270_Y	276_P	0.694	1.00
153_M	343_I	0.692	1.00
414_L	422_G	0.692	1.00
154_W	343_I	0.691	1.00
28_A	307_A	0.691	1.00
143_I	355_L	0.691	1.00
197_P	200_N	0.691	1.00
149_I	302_N	0.690	1.00
68_I	385_A	0.690	1.00
202_W	205_V	0.689	1.00
27_A	168_G	0.689	1.00
330_F	342_A	0.685	1.00
254_N	258_Q	0.685	1.00
19_W	162_L	0.684	1.00
120_A	142_V	0.680	1.00
237_P	240_L	0.679	1.00
88_G	391_V	0.678	1.00
15_V	19_W	0.676	1.00
154_W	336_Y	0.676	1.00
396_M	400_N	0.675	1.00
37_L	371_I	0.675	1.00
105_Q	378_V	0.674	1.00
231_V	237_P	0.674	1.00
313_S	342_A	0.672	1.00
236_L	240_L	0.671	1.00
439_W	442_L	0.670	1.00
376_F	438_A	0.669	1.00
153_M	310_T	0.669	1.00
404_H	422_G	0.665	1.00
366_A	369_F	0.665	1.00
92_S	97_T	0.662	1.00
323_G	327_P	0.661	1.00
50_M	255_S	0.660	1.00
125_L	129_S	0.657	1.00
72_S	223_I	0.654	1.00
146_T	351_G	0.654	1.00
195_A	199_N	0.653	1.00
438_A	443_L	0.653	1.00
339_P	342_A	0.650	1.00
78_S	317_F	0.647	1.00
412_I	415_Y	0.647	1.00
22_A	25_G	0.647	1.00
147_I	150_T	0.647	1.00
441_I	449_Y	0.646	1.00
159_P	162_L	0.646	1.00
28_A	31_P	0.646	1.00
408_P	415_Y	0.646	1.00
61_Y	219_A	0.645	1.00
254_N	277_M	0.645	1.00
253_L	257_A	0.644	1.00
119_I	122_F	0.644	1.00
440_A	445_H	0.644	1.00
73_K	398_T	0.641	1.00
65_L	219_A	0.637	1.00
242_L	245_G	0.636	1.00
275_D	278_I	0.634	1.00
415_Y	423_T	0.633	1.00
88_G	392_R	0.632	1.00
246_I	250_G	0.632	1.00
28_A	308_F	0.629	1.00
314_R	317_F	0.628	1.00
51_P	55_I	0.627	1.00
227_E	317_F	0.624	1.00
72_S	236_L	0.623	1.00
431_L	435_V	0.623	1.00
404_H	421_F	0.622	1.00
101_G	381_G	0.622	1.00
90_G	94_A	0.621	1.00
438_A	441_I	0.619	1.00
82_V	99_G	0.618	1.00
233_K	398_T	0.618	1.00
206_L	417_A	0.617	1.00
417_A	422_G	0.616	1.00
125_L	130_I	0.615	1.00
309_A	313_S	0.615	1.00
204_L	207_T	0.615	1.00
192_P	197_P	0.614	1.00
377_Y	381_G	0.609	1.00
443_L	446_I	0.609	1.00
190_I	259_T	0.609	1.00
408_P	414_L	0.608	1.00
181_V	285_F	0.607	1.00
438_A	447_I	0.607	1.00
71_W	88_G	0.606	1.00
233_K	238_K	0.606	1.00
145_V	305_A	0.606	1.00
126_I	130_I	0.605	1.00
447_I	450_Y	0.604	1.00
122_F	297_V	0.603	1.00
54_V	215_T	0.601	1.00
107_L	346_T	0.600	1.00
386_A	412_I	0.600	1.00
120_A	124_Y	0.599	1.00
281_Y	285_F	0.597	1.00
92_S	446_I	0.597	1.00
156_G	159_P	0.596	1.00
161_G	306_L	0.594	1.00
418_V	425_P	0.593	1.00
51_P	252_I	0.593	1.00
185_G	191_L	0.592	1.00
316_I	345_L	0.592	1.00
329_V	333_V	0.591	1.00
123_I	298_A	0.590	1.00
106_Y	308_F	0.586	1.00
312_G	316_I	0.586	1.00
223_I	240_L	0.585	1.00
383_L	415_Y	0.584	1.00
36_T	39_F	0.584	1.00
433_I	436_Y	0.582	1.00
108_V	373_F	0.582	1.00
228_E	339_P	0.582	1.00
401_I	406_V	0.581	1.00
224_G	311_S	0.580	1.00
442_L	446_I	0.579	1.00
217_G	220_T	0.578	1.00
26_I	168_G	0.578	1.00
70_E	74_E	0.577	1.00
98_V	381_G	0.577	1.00
295_I	299_F	0.576	1.00
124_Y	138_W	0.576	1.00
125_L	131_A	0.575	1.00
257_A	260_I	0.575	1.00
65_L	69_Y	0.574	1.00
181_V	286_N	0.574	1.00
107_L	349_V	0.573	1.00
368_I	371_I	0.572	1.00
435_V	441_I	0.572	1.00
193_F	198_V	0.571	1.00
40_V	368_I	0.570	1.00
157_V	225_V	0.569	1.00
69_Y	73_K	0.569	1.00
329_V	345_L	0.568	1.00
56_L	209_M	0.567	1.00
81_Y	220_T	0.567	1.00
232_P	235_T	0.567	1.00
432_N	436_Y	0.566	1.00
352_A	355_L	0.564	1.00
35_A	39_F	0.562	1.00
266_N	271_A	0.560	1.00
26_I	29_N	0.557	1.00
64_T	415_Y	0.557	1.00
229_A	236_L	0.556	1.00
195_A	198_V	0.555	1.00
123_I	127_S	0.555	1.00
414_L	425_P	0.555	1.00
442_L	445_H	0.554	1.00
407_I	421_F	0.552	1.00
57_S	216_F	0.552	1.00
170_I	174_F	0.552	1.00
357_S	366_A	0.550	1.00
25_G	239_A	0.549	1.00
30_A	250_G	0.549	1.00
93_L	97_T	0.549	1.00
145_V	149_I	0.549	1.00
170_I	296_L	0.548	1.00
165_L	169_L	0.547	1.00
80_G	223_I	0.546	1.00
82_V	94_A	0.543	1.00
400_N	404_H	0.543	1.00
410_I	414_L	0.543	1.00
160_G	310_T	0.543	1.00
408_P	418_V	0.542	1.00
120_A	138_W	0.541	1.00
150_T	309_A	0.537	1.00
413_L	416_I	0.537	1.00
405_V	408_P	0.536	1.00
57_S	213_V	0.536	1.00
437_A	441_I	0.534	1.00
119_I	301_F	0.534	1.00
333_V	336_Y	0.533	1.00
340_G	343_I	0.533	1.00
345_L	349_V	0.531	1.00
442_L	449_Y	0.530	1.00
159_P	163_L	0.529	1.00
228_E	333_V	0.529	1.00
245_G	248_G	0.527	1.00
262_Y	279_V	0.526	1.00
438_A	449_Y	0.526	1.00
16_L	157_V	0.526	1.00
147_I	344_I	0.524	1.00
45_L	208_A	0.522	1.00
164_N	171_S	0.522	1.00
33_A	39_F	0.522	1.00
430_P	435_V	0.522	1.00
144_I	147_I	0.522	1.00
367_S	371_I	0.521	1.00
74_E	398_T	0.521	1.00
437_A	445_H	0.520	1.00
34_V	38_Y	0.520	1.00
234_S	237_P	0.519	1.00
81_Y	224_G	0.519	1.00
112_A	117_L	0.519	1.00
194_T	197_P	0.519	1.00
229_A	239_A	0.519	1.00
403_K	406_V	0.517	1.00
246_I	253_L	0.517	1.00
103_I	107_L	0.516	1.00
85_I	94_A	0.515	1.00
34_V	37_L	0.515	1.00
314_R	333_V	0.515	1.00
45_L	207_T	0.515	1.00
62_A	245_G	0.514	1.00
417_A	423_T	0.512	1.00
38_Y	255_S	0.512	1.00
434_A	438_A	0.510	1.00
145_V	302_N	0.509	1.00
31_P	171_S	0.508	1.00
262_Y	280_I	0.508	1.00
412_I	423_T	0.508	1.00
378_V	381_G	0.508	1.00
64_T	220_T	0.508	1.00
21_V	235_T	0.507	1.00
17_G	158_K	0.506	1.00
300_M	303_S	0.506	1.00
438_A	445_H	0.506	1.00
105_Q	377_Y	0.506	1.00
31_P	35_A	0.505	1.00
170_I	299_F	0.503	1.00
407_I	410_I	0.502	1.00
54_V	255_S	0.502	1.00
174_F	292_M	0.501	1.00
21_V	225_V	0.501	1.00
261_V	284_Y	0.500	1.00
316_I	320_A	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3l1lA	2	0.8996	100	0.314	Contact Map
3giaA	1	0.9209	100	0.355	Contact Map
4djkA	2	0.891	100	0.372	Contact Map
3dh4A	3	0.9124	99	0.856	Contact Map
2xq2A	2	0.9124	98.9	0.861	Contact Map
2jlnA	1	0.8953	98.7	0.869	Contact Map
2a65A	2	0.906	97.4	0.905	Contact Map
4xp4A	1	0.9316	97.4	0.905	Contact Map
4us3A	1	0.8526	97.2	0.908	Contact Map
4wgvA	2	0.7799	97.2	0.909	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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