Q97ZA6 - SULSO - GREMLIN Contacts

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Q97ZA6 - NADH-Ubiquinone/plastoquinone related

UniProt:	Q97ZA6	Sequences: MNIEPILLLLIPIISNVGFFKLKLIKTLSVLSAVLTSIISIFLYFLAPIKNSFFFITKFTTFFLLVIASIYLLSTLYSMNYIKPSKIVSERLYYILLNSFASSMLFTVIMNNYGLMWVGVELTTVTSALLIIAEASETSLEATWRYIIIVSAGVTLALFSIIFIYYNYHTLTVTEILTKPENNIITKLAVALALIGFGTKAGVFPMYTWLPDAHSEAPSPISALFSGVLLPAATYVVYMVYQVNPLTNIFVIFTTLSIITASIILTYQWHIKRMFAYSTIENMNLALLGLTIGQPLGAIILLLAHAFGKAGAFYSSGIVLKVLGEKRIENIGGLHTKLKLTSVSLLLSSLAVTGTPPFATFIGEFFILQTLIQKGYIIEFILIVISLATAFISINYNVTKMIFTQRELTVSEEPKLITFISLVSSIIPLVLGILLLVILS	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	440 (424)
Sequences:	20465 (12469)
Seq/√Len:	605.6

ECOLI - HYFB NUOL HYCC HYFF NUOM HYFD NUON
BACSU - MRPA MRPD NDHF
HALSA - Q9HRL3 Q9HRT0 Q9HRL2 Q9HRS9 Q9HRL1 Q9HRS8
SULSO - Q97ZA6 Q980G8 Q97ZA9 Q980G9

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
57_T	239_M	4.720	1.00
311_G	348_S	4.710	1.00
106_F	119_G	4.495	1.00
172_T	175_E	3.807	1.00
64_L	109_I	3.678	1.00
132_I	143_T	3.499	1.00
145_R	212_D	3.249	1.00
71_Y	101_A	3.240	1.00
270_H	326_K	3.219	1.00
304_A	359_A	3.162	1.00
301_L	363_G	2.987	1.00
258_I	385_I	2.854	1.00
254_T	291_T	2.716	1.00
170_T	175_E	2.704	1.00
275_F	316_S	2.681	1.00
269_W	329_E	2.663	1.00
103_S	122_L	2.609	1.00
64_L	105_L	2.567	1.00
67_I	108_V	2.537	1.00
325_E	330_N	2.530	1.00
327_R	330_N	2.499	1.00
160_S	192_L	2.470	1.00
15_S	32_S	2.384	1.00
203_V	287_L	2.379	1.00
346_L	398_V	2.373	1.00
55_F	111_N	2.311	1.00
349_S	393_S	2.262	1.00
78_S	93_Y	2.244	1.00
13_I	102_S	2.222	1.00
68_A	105_L	2.198	1.00
230_L	279_T	2.133	1.00
288_L	382_L	2.057	1.00
274_M	328_I	2.056	1.00
266_T	391_F	2.042	1.00
289_G	367_I	2.012	1.00
198_G	203_V	1.982	1.00
175_E	178_T	1.896	1.00
57_T	60_T	1.881	1.00
415_K	419_F	1.841	1.00
248_N	252_I	1.829	1.00
259_I	385_I	1.810	1.00
278_S	392_I	1.803	1.00
338_L	341_T	1.802	1.00
116_M	236_V	1.792	1.00
269_W	327_R	1.778	1.00
202_G	210_L	1.777	1.00
34_V	72_L	1.768	1.00
142_A	216_E	1.765	1.00
262_S	281_E	1.747	1.00
300_I	363_G	1.729	1.00
251_V	291_T	1.719	1.00
268_Q	273_R	1.708	1.00
113_Y	176_I	1.699	1.00
307_F	427_I	1.693	1.00
38_I	42_F	1.676	1.00
163_F	189_A	1.669	1.00
426_I	430_V	1.661	1.00
111_N	174_T	1.642	1.00
368_L	382_L	1.638	1.00
204_F	256_L	1.637	1.00
66_V	306_A	1.635	1.00
24_L	27_T	1.634	1.00
194_L	198_G	1.626	1.00
12_P	15_S	1.624	1.00
113_Y	240_V	1.624	1.00
271_I	397_N	1.608	1.00
395_N	400_K	1.608	1.00
22_L	26_K	1.607	1.00
175_E	179_K	1.589	1.00
9_L	12_P	1.587	1.00
110_M	115_L	1.568	1.00
34_V	38_I	1.564	1.00
37_S	69_S	1.544	1.00
60_T	235_Y	1.544	1.00
255_T	381_I	1.532	1.00
96_L	129_L	1.515	1.00
335_H	342_S	1.514	1.00
238_Y	290_L	1.510	1.00
341_T	412_E	1.506	1.00
165_Y	171_L	1.496	1.00
167_N	189_A	1.493	1.00
130_L	221_I	1.490	1.00
55_F	58_K	1.484	1.00
369_Q	373_Q	1.468	1.00
37_S	41_I	1.467	1.00
286_A	298_A	1.463	1.00
62_F	303_L	1.450	1.00
197_F	236_V	1.449	1.00
75_T	97_L	1.444	1.00
112_N	171_L	1.437	1.00
36_T	40_S	1.435	1.00
107_T	232_A	1.432	1.00
39_I	43_L	1.427	1.00
203_V	253_F	1.424	1.00
32_S	36_T	1.423	1.00
184_I	188_L	1.418	1.00
250_F	291_T	1.410	1.00
247_T	251_V	1.390	1.00
112_N	172_T	1.389	1.00
29_S	33_A	1.389	1.00
160_S	196_G	1.388	1.00
162_I	166_Y	1.380	1.00
262_S	385_I	1.373	1.00
414_P	417_I	1.360	1.00
116_M	173_V	1.359	1.00
288_L	371_L	1.357	1.00
345_L	349_S	1.349	1.00
347_L	425_S	1.349	1.00
290_L	298_A	1.346	1.00
33_A	36_T	1.337	1.00
70_I	310_A	1.328	1.00
75_T	94_Y	1.326	1.00
312_A	348_S	1.319	1.00
33_A	40_S	1.315	1.00
9_L	102_S	1.312	1.00
53_F	111_N	1.309	1.00
56_I	109_I	1.307	1.00
28_L	32_S	1.305	1.00
23_K	26_K	1.302	1.00
160_S	193_A	1.287	1.00
31_L	35_L	1.284	1.00
422_L	426_I	1.283	1.00
237_V	287_L	1.282	1.00
238_Y	298_A	1.272	1.00
33_A	37_S	1.268	1.00
194_L	250_F	1.266	1.00
212_D	273_R	1.264	1.00
308_G	351_A	1.263	1.00
423_V	427_I	1.257	1.00
17_V	20_F	1.251	1.00
198_G	253_F	1.244	1.00
149_I	208_T	1.243	1.00
16_N	20_F	1.237	1.00
160_S	189_A	1.222	1.00
342_S	403_F	1.222	1.00
292_I	297_G	1.221	1.00
137_E	216_E	1.216	1.00
40_S	68_A	1.214	1.00
420_I	423_V	1.213	1.00
70_I	306_A	1.211	1.00
260_T	264_I	1.209	1.00
254_T	284_N	1.191	1.00
80_N	83_K	1.188	1.00
77_Y	314_Y	1.185	1.00
342_S	398_V	1.184	1.00
292_I	371_L	1.182	1.00
415_K	418_T	1.177	1.00
138_T	216_E	1.175	1.00
23_K	27_T	1.167	1.00
63_F	302_L	1.166	1.00
117_W	158_L	1.161	1.00
21_K	24_L	1.161	1.00
62_F	299_I	1.159	1.00
304_A	363_G	1.154	1.00
315_S	345_L	1.153	1.00
178_T	181_E	1.150	1.00
345_L	397_N	1.150	1.00
344_S	425_S	1.146	1.00
153_G	199_T	1.145	1.00
341_T	413_E	1.145	1.00
320_L	326_K	1.140	1.00
111_N	172_T	1.138	1.00
161_I	193_A	1.137	1.00
289_G	298_A	1.137	1.00
157_A	196_G	1.134	1.00
141_E	145_R	1.132	1.00
157_A	161_I	1.130	1.00
136_S	139_S	1.125	1.00
22_L	25_I	1.122	1.00
389_T	392_I	1.107	1.00
73_L	423_V	1.105	1.00
59_F	238_Y	1.104	1.00
315_S	421_S	1.102	1.00
348_S	425_S	1.098	1.00
252_I	256_L	1.096	1.00
163_F	185_I	1.091	1.00
99_S	126_T	1.088	1.00
416_L	420_I	1.084	1.00
366_F	369_Q	1.076	1.00
68_A	72_L	1.073	1.00
9_L	16_N	1.071	1.00
271_I	316_S	1.066	1.00
174_T	178_T	1.066	1.00
328_I	401_M	1.063	1.00
103_S	126_T	1.059	1.00
25_I	28_L	1.057	1.00
346_L	402_I	1.057	1.00
281_E	389_T	1.055	1.00
114_G	171_L	1.053	1.00
15_S	19_F	1.052	1.00
199_T	206_M	1.051	1.00
430_V	434_L	1.051	1.00
70_I	227_G	1.050	1.00
349_S	398_V	1.049	1.00
322_V	338_L	1.036	1.00
56_I	61_T	1.033	1.00
167_N	185_I	1.031	1.00
352_V	393_S	1.030	1.00
165_Y	168_Y	1.027	1.00
21_K	25_I	1.025	1.00
254_T	288_L	1.022	1.00
26_K	29_S	1.020	1.00
377_I	380_F	1.019	1.00
204_F	260_T	1.017	1.00
340_L	343_V	1.015	1.00
29_S	32_S	1.015	1.00
261_A	284_N	1.014	1.00
29_S	75_T	1.004	1.00
80_N	416_L	1.004	1.00
113_Y	161_I	1.003	1.00
289_G	297_G	1.001	1.00
72_L	76_L	1.001	1.00
103_S	119_G	1.001	1.00
211_P	277_Y	0.991	1.00
168_Y	176_I	0.989	1.00
344_S	421_S	0.988	1.00
305_H	309_K	0.988	1.00
25_I	29_S	0.987	1.00
350_L	355_T	0.986	1.00
201_A	234_T	0.985	1.00
427_I	431_L	0.984	1.00
60_T	239_M	0.984	1.00
398_V	403_F	0.976	1.00
219_S	272_K	0.971	1.00
80_N	414_P	0.970	1.00
98_N	102_S	0.966	1.00
10_L	14_I	0.966	1.00
323_L	331_I	0.964	1.00
59_F	299_I	0.963	1.00
262_S	392_I	0.960	1.00
189_A	193_A	0.959	1.00
187_K	191_A	0.953	1.00
187_K	246_L	0.949	1.00
248_N	251_V	0.949	1.00
97_L	224_L	0.948	1.00
15_S	20_F	0.947	1.00
234_T	302_L	0.947	1.00
13_I	17_V	0.947	1.00
163_F	167_N	0.942	1.00
258_I	288_L	0.942	1.00
182_N	186_T	0.941	1.00
63_F	235_Y	0.939	1.00
12_P	16_N	0.937	1.00
69_S	73_L	0.937	1.00
282_N	389_T	0.935	1.00
12_P	20_F	0.935	1.00
156_L	195_I	0.934	1.00
344_S	422_L	0.929	1.00
380_F	384_V	0.928	1.00
270_H	327_R	0.927	1.00
184_I	187_K	0.927	1.00
340_L	344_S	0.926	1.00
340_L	422_L	0.926	1.00
262_S	388_A	0.923	1.00
332_G	407_E	0.923	1.00
223_A	314_Y	0.918	1.00
222_S	230_L	0.917	1.00
27_T	31_L	0.916	1.00
77_Y	317_G	0.915	1.00
26_K	30_V	0.914	1.00
156_L	192_L	0.913	1.00
345_L	402_I	0.913	1.00
100_F	104_M	0.912	1.00
40_S	43_L	0.911	1.00
282_N	301_L	0.911	1.00
318_I	341_T	0.910	1.00
342_S	402_I	0.909	1.00
127_S	229_L	0.907	1.00
425_S	428_P	0.906	1.00
117_W	121_E	0.906	1.00
286_A	302_L	0.905	1.00
300_I	304_A	0.904	1.00
365_F	369_Q	0.904	1.00
13_I	16_N	0.903	1.00
128_A	143_T	0.901	1.00
139_S	216_E	0.900	1.00
117_W	161_I	0.900	1.00
60_T	64_L	0.899	1.00
46_L	49_I	0.899	1.00
332_G	400_K	0.897	1.00
105_L	109_I	0.897	1.00
36_T	68_A	0.895	1.00
188_L	192_L	0.894	1.00
425_S	429_L	0.893	1.00
29_S	94_Y	0.891	1.00
35_L	39_I	0.888	1.00
311_G	424_S	0.887	1.00
67_I	101_A	0.886	1.00
71_Y	97_L	0.885	1.00
418_T	422_L	0.884	1.00
215_S	226_S	0.883	1.00
234_T	286_A	0.883	1.00
322_V	417_I	0.882	1.00
321_K	411_S	0.882	1.00
194_L	237_V	0.879	1.00
319_V	334_L	0.879	1.00
385_I	388_A	0.878	1.00
235_Y	239_M	0.877	1.00
131_I	213_A	0.876	1.00
183_N	187_K	0.874	1.00
37_S	68_A	0.873	1.00
164_I	189_A	0.870	1.00
359_A	431_L	0.870	1.00
282_N	392_I	0.868	1.00
93_Y	220_P	0.868	1.00
258_I	284_N	0.868	1.00
271_I	331_I	0.867	1.00
226_S	279_T	0.867	1.00
256_L	260_T	0.863	1.00
26_K	79_M	0.858	1.00
140_L	143_T	0.858	1.00
11_I	15_S	0.857	1.00
26_K	33_A	0.855	1.00
251_V	254_T	0.853	1.00
294_Q	297_G	0.851	1.00
251_V	255_T	0.849	1.00
104_M	229_L	0.845	1.00
26_K	32_S	0.844	1.00
285_L	367_I	0.843	1.00
359_A	428_P	0.843	1.00
27_T	30_V	0.842	1.00
30_V	33_A	0.841	1.00
261_A	264_I	0.841	1.00
390_A	394_I	0.836	1.00
338_L	412_E	0.828	1.00
263_I	388_A	0.827	1.00
176_I	179_K	0.826	1.00
318_I	413_E	0.824	1.00
343_V	402_I	0.823	1.00
104_M	123_T	0.820	1.00
226_S	309_K	0.819	1.00
74_S	314_Y	0.819	1.00
170_T	176_I	0.819	1.00
274_M	397_N	0.818	1.00
279_T	305_H	0.817	1.00
53_F	172_T	0.815	1.00
234_T	287_L	0.813	1.00
54_F	109_I	0.811	1.00
164_I	176_I	0.811	1.00
297_G	370_T	0.810	1.00
100_F	127_S	0.808	1.00
170_T	173_V	0.805	1.00
254_T	287_L	0.804	1.00
351_A	358_F	0.801	1.00
183_N	186_T	0.799	1.00
419_F	422_L	0.799	1.00
120_V	157_A	0.796	1.00
151_S	154_V	0.796	1.00
26_K	37_S	0.794	1.00
66_V	303_L	0.790	1.00
275_F	312_A	0.789	1.00
234_T	283_M	0.786	1.00
261_A	281_E	0.785	1.00
123_T	229_L	0.785	1.00
108_V	235_Y	0.783	1.00
308_G	360_T	0.781	1.00
131_I	217_A	0.781	1.00
173_V	177_L	0.780	1.00
32_S	35_L	0.780	1.00
25_I	33_A	0.779	1.00
259_I	263_I	0.778	1.00
36_T	39_I	0.778	1.00
177_L	181_E	0.775	1.00
9_L	15_S	0.775	1.00
138_T	215_S	0.774	1.00
318_I	421_S	0.774	1.00
413_E	418_T	0.774	1.00
53_F	112_N	0.773	1.00
138_T	141_E	0.768	1.00
393_S	397_N	0.767	1.00
237_V	290_L	0.767	1.00
12_P	19_F	0.766	1.00
104_M	228_V	0.766	1.00
219_S	317_G	0.765	1.00
73_L	420_I	0.765	1.00
87_I	92_L	0.765	1.00
79_M	416_L	0.764	1.00
123_T	232_A	0.764	1.00
376_Y	379_E	0.763	1.00
268_Q	274_M	0.763	1.00
358_F	362_I	0.761	1.00
15_S	18_G	0.757	1.00
265_L	392_I	0.755	1.00
191_A	195_I	0.755	1.00
131_I	225_F	0.755	1.00
190_V	246_L	0.755	1.00
33_A	75_T	0.754	1.00
65_L	69_S	0.754	1.00
342_S	346_L	0.752	1.00
67_I	104_M	0.749	1.00
10_L	13_I	0.747	1.00
9_L	18_G	0.746	1.00
39_I	42_F	0.746	1.00
328_I	400_K	0.744	1.00
128_A	150_V	0.742	1.00
12_P	17_V	0.741	1.00
180_P	186_T	0.736	1.00
413_E	417_I	0.733	1.00
14_I	18_G	0.732	1.00
153_G	196_G	0.732	1.00
251_V	288_L	0.730	1.00
262_S	278_S	0.730	1.00
177_L	242_Q	0.730	1.00
25_I	43_L	0.725	1.00
343_V	346_L	0.725	1.00
16_N	99_S	0.722	1.00
254_T	258_I	0.720	1.00
419_F	423_V	0.719	1.00
29_S	98_N	0.717	1.00
357_P	433_I	0.717	1.00
424_S	428_P	0.717	1.00
354_G	364_E	0.712	1.00
112_N	115_L	0.711	1.00
21_K	26_K	0.710	1.00
353_T	390_A	0.706	1.00
29_S	35_L	0.704	1.00
20_F	95_I	0.703	1.00
285_L	385_I	0.700	1.00
343_V	347_L	0.700	1.00
59_F	235_Y	0.699	1.00
91_R	95_I	0.699	1.00
294_Q	370_T	0.698	1.00
255_T	288_L	0.695	1.00
410_V	413_E	0.693	1.00
28_L	31_L	0.693	1.00
336_T	339_K	0.692	1.00
121_E	200_K	0.692	1.00
388_A	392_I	0.689	1.00
292_I	374_K	0.689	1.00
255_T	259_I	0.686	1.00
100_F	229_L	0.686	1.00
215_S	270_H	0.684	1.00
9_L	13_I	0.683	1.00
344_S	348_S	0.680	1.00
182_N	185_I	0.679	1.00
188_L	191_A	0.678	1.00
349_S	397_N	0.677	1.00
26_K	36_T	0.673	1.00
50_K	114_G	0.671	1.00
81_Y	220_P	0.667	1.00
32_S	38_I	0.666	1.00
315_S	348_S	0.666	1.00
375_G	378_I	0.664	1.00
9_L	20_F	0.661	1.00
59_F	63_F	0.660	1.00
222_S	272_K	0.658	1.00
61_T	65_L	0.658	1.00
14_I	17_V	0.657	1.00
9_L	54_F	0.657	1.00
111_N	115_L	0.657	1.00
211_P	280_I	0.655	1.00
25_I	36_T	0.655	1.00
332_G	404_T	0.654	1.00
351_A	360_T	0.654	1.00
226_S	230_L	0.653	1.00
120_V	232_A	0.653	1.00
100_F	224_L	0.653	1.00
249_I	252_I	0.651	1.00
25_I	32_S	0.651	1.00
217_A	222_S	0.651	1.00
27_T	36_T	0.651	1.00
227_G	310_A	0.651	1.00
387_L	391_F	0.648	1.00
301_L	308_G	0.648	1.00
208_T	211_P	0.647	1.00
394_I	399_T	0.646	1.00
74_S	223_A	0.646	1.00
328_I	397_N	0.646	1.00
337_K	406_R	0.646	1.00
242_Q	245_P	0.645	1.00
144_W	148_I	0.644	1.00
282_N	309_K	0.644	1.00
68_A	101_A	0.644	1.00
217_A	226_S	0.643	1.00
278_S	309_K	0.641	1.00
56_I	60_T	0.640	1.00
262_S	389_T	0.639	1.00
268_Q	277_Y	0.637	1.00
429_L	433_I	0.635	1.00
30_V	34_V	0.632	1.00
340_L	418_T	0.631	1.00
278_S	305_H	0.630	1.00
93_Y	133_A	0.630	1.00
308_G	428_P	0.627	1.00
31_L	34_V	0.627	1.00
55_F	174_T	0.627	1.00
134_E	137_E	0.627	1.00
325_E	331_I	0.626	1.00
308_G	352_V	0.626	1.00
381_I	385_I	0.625	1.00
264_I	277_Y	0.624	1.00
33_A	72_L	0.621	1.00
158_L	162_I	0.620	1.00
429_L	432_G	0.619	1.00
370_T	374_K	0.617	1.00
346_L	403_F	0.617	1.00
356_P	361_F	0.617	1.00
28_L	43_L	0.616	1.00
33_A	39_I	0.615	1.00
71_Y	224_L	0.615	1.00
21_K	27_T	0.615	1.00
171_L	175_E	0.614	1.00
110_M	119_G	0.614	1.00
185_I	189_A	0.614	1.00
210_L	230_L	0.613	1.00
65_L	68_A	0.612	1.00
13_I	18_G	0.609	1.00
263_I	267_Y	0.608	1.00
226_S	305_H	0.608	1.00
36_T	43_L	0.607	1.00
335_H	402_I	0.607	1.00
222_S	225_F	0.606	1.00
315_S	344_S	0.604	1.00
252_I	255_T	0.601	1.00
231_P	283_M	0.600	1.00
24_L	28_L	0.600	1.00
73_L	310_A	0.599	1.00
368_L	383_I	0.598	1.00
318_I	417_I	0.596	1.00
307_F	359_A	0.595	1.00
164_I	193_A	0.595	1.00
35_L	38_I	0.594	1.00
227_G	231_P	0.594	1.00
73_L	424_S	0.593	1.00
74_S	97_L	0.592	1.00
163_F	188_L	0.592	1.00
185_I	188_L	0.591	1.00
113_Y	173_V	0.590	1.00
271_I	401_M	0.589	1.00
192_L	196_G	0.588	1.00
334_L	338_L	0.586	1.00
382_L	386_S	0.585	1.00
67_I	105_L	0.584	1.00
264_I	268_Q	0.583	1.00
78_S	220_P	0.583	1.00
16_N	102_S	0.583	1.00
116_M	157_A	0.583	1.00
63_F	67_I	0.581	1.00
93_Y	221_I	0.581	1.00
337_K	410_V	0.580	1.00
194_L	246_L	0.577	1.00
11_I	35_L	0.576	1.00
259_I	381_I	0.576	1.00
177_L	180_P	0.576	1.00
29_S	38_I	0.576	1.00
380_F	383_I	0.574	1.00
258_I	285_L	0.574	1.00
391_F	395_N	0.573	1.00
264_I	267_Y	0.573	1.00
368_L	386_S	0.573	1.00
278_S	282_N	0.572	1.00
113_Y	164_I	0.572	1.00
417_I	420_I	0.571	1.00
241_Y	290_L	0.569	1.00
38_I	41_I	0.569	1.00
416_L	419_F	0.568	1.00
374_K	378_I	0.566	1.00
190_V	244_N	0.566	1.00
168_Y	172_T	0.566	1.00
117_W	154_V	0.566	1.00
78_S	81_Y	0.564	1.00
344_S	418_T	0.563	1.00
22_L	28_L	0.563	1.00
354_G	358_F	0.561	1.00
9_L	19_F	0.559	1.00
314_Y	420_I	0.558	1.00
127_S	130_L	0.556	1.00
339_K	342_S	0.554	1.00
21_K	36_T	0.554	1.00
13_I	20_F	0.554	1.00
347_L	429_L	0.553	0.99
40_S	44_Y	0.552	0.99
117_W	128_A	0.550	0.99
204_F	261_A	0.550	0.99
318_I	322_V	0.549	0.99
424_S	427_I	0.548	0.99
43_L	61_T	0.547	0.99
346_L	350_L	0.546	0.99
159_F	163_F	0.546	0.99
364_E	386_S	0.545	0.99
215_S	273_R	0.544	0.99
37_S	72_L	0.544	0.99
388_A	391_F	0.543	0.99
413_E	416_L	0.542	0.99
15_S	98_N	0.541	0.99
201_A	233_A	0.540	0.99
24_L	32_S	0.539	0.99
40_S	65_L	0.538	0.99
74_S	220_P	0.537	0.99
383_I	386_S	0.536	0.99
101_A	105_L	0.535	0.99
255_T	378_I	0.534	0.99
269_W	278_S	0.533	0.99
186_T	189_A	0.532	0.99
321_K	417_I	0.531	0.99
96_L	126_T	0.529	0.99
336_T	406_R	0.529	0.99
339_K	343_V	0.528	0.99
328_I	331_I	0.528	0.99
347_L	351_A	0.528	0.99
27_T	32_S	0.525	0.99
289_G	370_T	0.524	0.99
30_V	72_L	0.523	0.99
111_N	239_M	0.523	0.99
319_V	331_I	0.523	0.99
307_F	424_S	0.522	0.99
69_S	427_I	0.520	0.99
9_L	17_V	0.519	0.99
174_T	177_L	0.519	0.99
399_T	404_T	0.518	0.99
124_T	150_V	0.517	0.99
334_L	339_K	0.517	0.99
342_S	401_M	0.516	0.99
22_L	27_T	0.516	0.99
279_T	283_M	0.515	0.99
203_V	283_M	0.515	0.99
29_S	36_T	0.514	0.99
67_I	71_Y	0.512	0.99
415_K	420_I	0.511	0.99
127_S	131_I	0.511	0.99
225_F	229_L	0.511	0.99
354_G	360_T	0.511	0.99
16_N	19_F	0.510	0.99
411_S	414_P	0.510	0.99
370_T	373_Q	0.508	0.99
25_I	40_S	0.507	0.99
210_L	213_A	0.507	0.99
399_T	403_F	0.506	0.99
119_G	122_L	0.506	0.99
222_S	305_H	0.505	0.99
149_I	199_T	0.504	0.99
362_I	433_I	0.504	0.99
276_A	279_T	0.503	0.99
37_S	40_S	0.503	0.99
66_V	302_L	0.502	0.99
282_N	285_L	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3rkoM	1	0.9841	100	0.136	Contact Map
3rkoL	1	0.9886	100	0.146	Contact Map
4he8L	1	0.9864	100	0.149	Contact Map
4he8M	1	0.9614	100	0.15	Contact Map
3rkoN	1	0.975	100	0.158	Contact Map
4he8N	1	0.9409	100	0.183	Contact Map
4he8K	1	0.2091	36.5	0.959	Contact Map
3rkoK	1	0.2182	30.1	0.96	Contact Map
4he8J	1	0.3455	11.7	0.967	Contact Map
2gfpA	2	0.7614	3	0.975	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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