Q97Z19 - SULSO - GREMLIN Contacts

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Q97Z19 - Dihydrolipoamide dehydrogenase (PdhD-1)

UniProt:	Q97Z19	Sequences: MKYDIVIIGGGTAGYVAGSILARKGKKVLVAEKEKFGGVCVNFGCVPSIFLFDATFLLNRFKEIVYYIGLDGEIEYKDLLFSKRNEIIDYLSNAGRKLIEDSGGETELGEVEIISPSTVKVNGRIVEFDNLIIATGSKPMVPSINGIENTLSEDDAVNLNSVPSSMVIIGGGYAGVEIAQMYSRLGSQVTLLSRSKILPTFPEDARSIIKDSLEFDGVNIEENIRIVKIHDGKVITEKGEVEGNVIVYATGRRPQLPKGIEILGLSINECGIVVDKYRRVKNNVYAIGDVIDKERKTAHSAILDAVIASLHILKDATFLPLIDNLKIPQVLYTDPQVGIVGNDKEAKEFSVFPFAATTRAIINGFKDGYVKLGINERNEIVFGEVIGDKAEELINILTLVVNNRIRIESLALMSFVHPSFSEAIVNAAKGFFDLDVDKYKSKDGKT	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	446 (419)
Sequences:	12630 (8239)
Seq/√Len:	402.5

ECOLI - STHA GSHR DLDH RCLA NORW HCAD
BACSU - DLDH1 DLDH3 DLDH2
HALSA - DLDH Q9HSN0 Q9HP48
SULSO - Q97Z19 Q97VD9 Q97XZ3 Q97VQ4 Q97WE3 Q97Y24 Q97YT2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
167_V	243_G	4.255	1.00
33_K	110_E	4.209	1.00
275_D	279_R	3.941	1.00
383_G	397_L	3.075	1.00
266_S	273_V	3.012	1.00
115_S	118_T	2.981	1.00
165_S	188_Q	2.908	1.00
3_Y	105_E	2.849	1.00
188_Q	219_N	2.780	1.00
138_K	257_P	2.709	1.00
259_G	262_I	2.672	1.00
3_Y	29_L	2.655	1.00
162_V	187_S	2.621	1.00
190_T	221_E	2.621	1.00
114_I	120_K	2.572	1.00
203_E	344_K	2.521	1.00
118_T	125_I	2.510	1.00
210_K	214_E	2.507	1.00
128_F	131_L	2.507	1.00
396_I	415_F	2.461	1.00
17_A	132_I	2.454	1.00
112_E	120_K	2.423	1.00
138_K	255_Q	2.375	1.00
165_S	244_N	2.371	1.00
29_L	107_E	2.357	1.00
69_G	72_G	2.355	1.00
375_N	378_N	2.352	1.00
167_V	192_L	2.312	1.00
140_M	253_R	2.276	1.00
109_G	121_V	2.251	1.00
120_K	125_I	2.246	1.00
385_V	390_A	2.200	1.00
6_V	126_V	2.185	1.00
152_S	155_D	2.170	1.00
5_I	21_L	2.165	1.00
114_I	125_I	2.127	1.00
308_A	312_I	2.121	1.00
379_E	404_R	2.066	1.00
195_S	223_N	2.002	1.00
13_A	287_I	2.000	1.00
6_V	119_V	1.999	1.00
6_V	31_A	1.985	1.00
230_H	235_I	1.973	1.00
176_V	191_L	1.968	1.00
118_T	127_E	1.949	1.00
113_I	131_L	1.931	1.00
138_K	253_R	1.921	1.00
344_K	348_E	1.896	1.00
400_V	405_I	1.870	1.00
343_D	347_K	1.858	1.00
145_N	228_K	1.840	1.00
183_S	188_Q	1.839	1.00
6_V	128_F	1.835	1.00
343_D	371_K	1.801	1.00
75_E	78_D	1.786	1.00
166_M	187_S	1.771	1.00
346_A	373_G	1.764	1.00
276_K	321_L	1.759	1.00
372_L	383_G	1.734	1.00
336_Q	391_E	1.721	1.00
176_V	333_T	1.717	1.00
6_V	29_L	1.701	1.00
4_D	129_D	1.691	1.00
166_M	182_Y	1.685	1.00
133_I	290_V	1.675	1.00
8_I	111_V	1.647	1.00
196_K	206_R	1.635	1.00
107_E	126_V	1.632	1.00
151_L	245_V	1.626	1.00
279_R	282_N	1.615	1.00
130_N	283_N	1.612	1.00
164_S	188_Q	1.603	1.00
132_I	312_I	1.579	1.00
194_R	225_R	1.555	1.00
78_D	82_S	1.541	1.00
117_S	283_N	1.535	1.00
164_S	244_N	1.529	1.00
96_R	108_L	1.523	1.00
285_Y	311_H	1.519	1.00
345_E	348_E	1.514	1.00
406_R	409_S	1.514	1.00
208_I	386_I	1.507	1.00
277_Y	311_H	1.501	1.00
5_I	26_K	1.500	1.00
31_A	126_V	1.500	1.00
130_N	312_I	1.494	1.00
36_F	106_T	1.493	1.00
151_L	159_L	1.491	1.00
221_E	224_I	1.477	1.00
183_S	218_V	1.477	1.00
20_I	310_L	1.470	1.00
184_R	216_D	1.460	1.00
135_T	290_V	1.459	1.00
156_A	182_Y	1.450	1.00
372_L	428_A	1.445	1.00
57_L	60_R	1.427	1.00
151_L	155_D	1.426	1.00
29_L	126_V	1.423	1.00
190_T	219_N	1.407	1.00
4_D	27_K	1.399	1.00
266_S	281_K	1.392	1.00
228_K	235_I	1.390	1.00
5_I	132_I	1.386	1.00
351_V	381_V	1.383	1.00
3_Y	107_E	1.374	1.00
268_N	273_V	1.366	1.00
85_N	89_D	1.361	1.00
30_V	99_I	1.352	1.00
196_K	203_E	1.338	1.00
278_R	291_I	1.338	1.00
209_I	386_I	1.337	1.00
205_A	386_I	1.332	1.00
113_I	119_V	1.330	1.00
202_P	371_K	1.324	1.00
69_G	75_E	1.320	1.00
114_I	118_T	1.318	1.00
43_F	154_D	1.312	1.00
201_F	339_I	1.308	1.00
279_R	283_N	1.300	1.00
205_A	369_Y	1.299	1.00
113_I	133_I	1.276	1.00
354_F	387_G	1.267	1.00
203_E	207_S	1.259	1.00
120_K	123_G	1.259	1.00
370_V	423_A	1.257	1.00
397_L	424_I	1.257	1.00
171_G	197_I	1.249	1.00
112_E	259_G	1.248	1.00
375_N	379_E	1.247	1.00
346_A	351_V	1.246	1.00
144_I	147_I	1.242	1.00
403_N	409_S	1.240	1.00
210_K	220_I	1.236	1.00
132_I	287_I	1.233	1.00
225_R	237_E	1.229	1.00
227_V	235_I	1.218	1.00
201_F	329_Q	1.214	1.00
204_D	371_K	1.214	1.00
192_L	241_V	1.212	1.00
63_E	66_Y	1.212	1.00
305_A	309_S	1.210	1.00
193_S	222_E	1.204	1.00
326_K	401_V	1.204	1.00
372_L	397_L	1.190	1.00
342_N	345_E	1.186	1.00
169_I	246_I	1.178	1.00
389_K	392_E	1.177	1.00
196_K	210_K	1.171	1.00
191_L	220_I	1.168	1.00
89_D	93_N	1.165	1.00
338_G	394_I	1.164	1.00
210_K	222_E	1.163	1.00
337_V	386_I	1.160	1.00
211_D	214_E	1.158	1.00
150_T	229_I	1.153	1.00
329_Q	339_I	1.146	1.00
99_I	104_G	1.145	1.00
212_S	215_F	1.142	1.00
155_D	158_N	1.140	1.00
272_I	290_V	1.139	1.00
86_E	90_Y	1.131	1.00
167_V	234_V	1.128	1.00
330_V	416_V	1.127	1.00
215_F	367_D	1.127	1.00
141_V	152_S	1.126	1.00
268_N	292_D	1.126	1.00
31_A	111_V	1.125	1.00
19_S	102_S	1.122	1.00
265_L	272_I	1.114	1.00
27_K	105_E	1.108	1.00
151_L	156_A	1.107	1.00
53_D	57_L	1.106	1.00
395_N	416_V	1.103	1.00
82_S	86_E	1.098	1.00
145_N	148_E	1.095	1.00
68_I	71_D	1.092	1.00
229_I	246_I	1.088	1.00
26_K	313_L	1.086	1.00
197_I	210_K	1.085	1.00
260_I	265_L	1.077	1.00
143_S	147_I	1.076	1.00
395_N	421_S	1.075	1.00
107_E	124_R	1.072	1.00
13_A	301_A	1.070	1.00
213_L	218_V	1.068	1.00
351_V	373_G	1.066	1.00
176_V	213_L	1.066	1.00
105_E	124_R	1.066	1.00
307_I	322_I	1.062	1.00
161_S	245_V	1.061	1.00
166_M	245_V	1.060	1.00
77_K	160_N	1.058	1.00
131_L	284_V	1.050	1.00
26_K	130_N	1.049	1.00
68_I	72_G	1.048	1.00
84_R	88_I	1.047	1.00
224_I	238_K	1.047	1.00
8_I	133_I	1.043	1.00
112_E	262_I	1.040	1.00
340_V	401_V	1.038	1.00
205_A	384_E	1.036	1.00
24_K	310_L	1.032	1.00
273_V	281_K	1.030	1.00
208_I	211_D	1.027	1.00
278_R	308_A	1.026	1.00
167_V	241_V	1.026	1.00
274_V	291_I	1.024	1.00
338_G	390_A	1.021	1.00
113_I	128_F	1.018	1.00
330_V	391_E	1.018	1.00
31_A	121_V	1.017	1.00
259_G	263_L	1.016	1.00
209_I	337_V	1.016	1.00
214_E	219_N	1.016	1.00
149_N	245_V	1.015	1.00
211_D	215_F	1.011	1.00
345_E	349_F	1.009	1.00
58_L	62_K	1.007	1.00
20_I	24_K	1.005	1.00
26_K	129_D	1.004	1.00
165_S	190_T	1.003	1.00
10_G	30_V	1.002	1.00
169_I	248_Y	1.001	1.00
88_I	91_L	0.998	1.00
99_I	106_T	0.998	1.00
34_E	43_F	0.998	1.00
405_I	409_S	0.997	1.00
197_I	222_E	0.992	1.00
256_L	267_I	0.992	1.00
166_M	247_V	0.991	1.00
375_N	381_V	0.990	1.00
212_S	367_D	0.989	1.00
165_S	187_S	0.989	1.00
116_P	283_N	0.986	1.00
351_V	375_N	0.984	1.00
24_K	313_L	0.982	1.00
69_G	73_E	0.980	1.00
323_D	402_N	0.979	1.00
3_Y	27_K	0.977	1.00
40_C	45_C	0.977	1.00
208_I	212_S	0.975	1.00
287_I	308_A	0.972	1.00
10_G	36_F	0.969	1.00
93_N	96_R	0.965	1.00
54_A	83_K	0.964	1.00
59_N	216_D	0.962	1.00
61_F	64_I	0.961	1.00
130_N	285_Y	0.961	1.00
207_S	211_D	0.957	1.00
113_I	263_L	0.956	1.00
121_V	126_V	0.954	1.00
221_E	241_V	0.953	1.00
340_V	398_T	0.952	1.00
171_G	193_S	0.951	1.00
197_I	220_I	0.949	1.00
267_I	273_V	0.948	1.00
343_D	373_G	0.947	1.00
31_A	109_G	0.943	1.00
116_P	264_G	0.941	1.00
212_S	386_I	0.939	1.00
59_N	62_K	0.939	1.00
169_I	250_T	0.937	1.00
8_I	119_V	0.931	1.00
59_N	184_R	0.930	1.00
55_T	184_R	0.930	1.00
308_A	311_H	0.929	1.00
279_R	285_Y	0.927	1.00
274_V	286_A	0.927	1.00
286_A	290_V	0.927	1.00
139_P	142_P	0.922	1.00
205_A	337_V	0.922	1.00
109_G	122_N	0.920	1.00
173_Y	331_L	0.917	1.00
236_T	241_V	0.915	1.00
196_K	344_K	0.913	1.00
400_V	410_L	0.912	1.00
97_K	101_D	0.909	1.00
54_A	79_L	0.908	1.00
16_V	302_I	0.908	1.00
209_I	333_T	0.898	1.00
4_D	26_K	0.898	1.00
42_N	92_S	0.897	1.00
52_F	181_M	0.896	1.00
56_F	60_R	0.896	1.00
212_S	216_D	0.895	1.00
346_A	381_V	0.894	1.00
113_I	259_G	0.891	1.00
307_I	311_H	0.890	1.00
380_I	397_L	0.890	1.00
265_L	281_K	0.888	1.00
86_E	89_D	0.888	1.00
20_I	309_S	0.886	1.00
294_E	327_I	0.886	1.00
370_V	385_V	0.884	1.00
175_G	193_S	0.883	1.00
279_R	311_H	0.881	1.00
196_K	207_S	0.877	1.00
192_L	221_E	0.876	1.00
227_V	237_E	0.875	1.00
82_S	160_N	0.875	1.00
113_I	262_I	0.875	1.00
353_P	356_A	0.873	1.00
90_Y	361_I	0.873	1.00
21_L	26_K	0.873	1.00
140_M	250_T	0.871	1.00
165_S	243_G	0.866	1.00
263_L	284_V	0.860	1.00
26_K	312_I	0.852	1.00
402_N	412_L	0.851	1.00
168_I	247_V	0.850	1.00
300_S	327_I	0.849	1.00
20_I	23_R	0.848	1.00
8_I	258_K	0.847	1.00
192_L	224_I	0.844	1.00
17_A	309_S	0.840	1.00
263_L	281_K	0.839	1.00
309_S	313_L	0.838	1.00
277_Y	321_L	0.835	1.00
165_S	242_E	0.834	1.00
117_S	127_E	0.834	1.00
184_R	334_D	0.829	1.00
32_E	35_K	0.828	1.00
6_V	131_L	0.828	1.00
336_Q	389_K	0.826	1.00
131_L	283_N	0.820	1.00
132_I	308_A	0.820	1.00
342_N	384_E	0.816	1.00
183_S	216_D	0.816	1.00
372_L	427_A	0.816	1.00
263_L	267_I	0.813	1.00
21_L	309_S	0.809	1.00
272_I	286_A	0.808	1.00
169_I	226_I	0.807	1.00
207_S	210_K	0.807	1.00
91_L	95_G	0.806	1.00
135_T	258_K	0.805	1.00
396_I	399_L	0.804	1.00
201_F	331_L	0.803	1.00
146_G	152_S	0.803	1.00
140_M	143_S	0.803	1.00
17_A	305_A	0.803	1.00
5_I	309_S	0.800	1.00
405_I	410_L	0.800	1.00
304_D	324_N	0.799	1.00
83_K	87_I	0.798	1.00
77_K	82_S	0.798	1.00
357_T	360_A	0.796	1.00
192_L	236_T	0.795	1.00
373_G	376_E	0.795	1.00
59_N	63_E	0.794	1.00
69_G	78_D	0.792	1.00
34_E	108_L	0.792	1.00
190_T	243_G	0.787	1.00
159_L	245_V	0.785	1.00
48_S	178_I	0.784	1.00
84_R	158_N	0.779	1.00
374_I	407_I	0.777	1.00
256_L	290_V	0.768	1.00
213_L	220_I	0.767	1.00
144_I	148_E	0.766	1.00
310_L	315_D	0.765	1.00
97_K	100_E	0.763	1.00
208_I	369_Y	0.762	1.00
181_M	185_L	0.760	1.00
224_I	237_E	0.753	1.00
61_F	65_V	0.749	1.00
278_R	311_H	0.746	1.00
399_L	405_I	0.743	1.00
378_N	404_R	0.742	1.00
392_E	421_S	0.741	1.00
198_L	209_I	0.741	1.00
385_V	393_L	0.741	1.00
175_G	194_R	0.740	1.00
257_P	261_E	0.740	1.00
92_S	96_R	0.739	1.00
116_P	263_L	0.736	1.00
7_I	14_G	0.735	1.00
383_G	401_V	0.734	1.00
179_A	218_V	0.728	1.00
85_N	88_I	0.728	1.00
179_A	191_L	0.727	1.00
303_L	306_V	0.726	1.00
82_S	85_N	0.726	1.00
399_L	410_L	0.724	1.00
410_L	428_A	0.724	1.00
310_L	314_K	0.723	1.00
96_R	106_T	0.722	1.00
71_D	75_E	0.722	1.00
379_E	406_R	0.718	1.00
202_P	384_E	0.717	1.00
96_R	100_E	0.717	1.00
95_G	99_I	0.716	1.00
17_A	308_A	0.716	1.00
269_E	273_V	0.715	1.00
194_R	199_P	0.713	1.00
380_I	401_V	0.713	1.00
141_V	248_Y	0.709	1.00
168_I	175_G	0.706	1.00
397_L	401_V	0.705	1.00
278_R	307_I	0.701	1.00
176_V	197_I	0.699	1.00
65_V	78_D	0.693	1.00
265_L	284_V	0.693	1.00
53_D	56_F	0.692	1.00
21_L	28_V	0.692	1.00
35_K	43_F	0.691	1.00
48_S	52_F	0.688	1.00
358_T	361_I	0.685	1.00
159_L	182_Y	0.685	1.00
274_V	278_R	0.685	1.00
87_I	91_L	0.680	0.99
3_Y	6_V	0.680	0.99
85_N	158_N	0.680	0.99
236_T	239_G	0.676	0.99
150_T	248_Y	0.676	0.99
339_I	384_E	0.676	0.99
79_L	185_L	0.675	0.99
87_I	90_Y	0.675	0.99
306_V	310_L	0.673	0.99
346_A	349_F	0.672	0.99
147_I	150_T	0.672	0.99
137_S	252_R	0.672	0.99
409_S	412_L	0.671	0.99
407_I	411_A	0.669	0.99
180_Q	213_L	0.669	0.99
107_E	121_V	0.668	0.99
139_P	143_S	0.667	0.99
399_L	413_M	0.667	0.99
354_F	423_A	0.665	0.99
180_Q	184_R	0.665	0.99
193_S	199_P	0.664	0.99
387_G	390_A	0.662	0.99
365_F	388_D	0.661	0.99
221_E	240_E	0.659	0.99
7_I	18_G	0.659	0.99
91_L	94_A	0.659	0.99
326_K	402_N	0.654	0.99
399_L	403_N	0.653	0.99
74_I	79_L	0.651	0.99
165_S	183_S	0.651	0.99
292_D	296_K	0.651	0.99
204_D	369_Y	0.651	0.99
91_L	361_I	0.649	0.99
190_T	241_V	0.649	0.99
260_I	267_I	0.648	0.99
93_N	97_K	0.647	0.99
30_V	104_G	0.644	0.99
83_K	86_E	0.643	0.99
53_D	363_N	0.643	0.99
285_Y	312_I	0.641	0.99
195_S	203_E	0.640	0.99
182_Y	187_S	0.639	0.99
22_A	104_G	0.639	0.99
19_S	23_R	0.637	0.99
180_Q	216_D	0.636	0.99
303_L	307_I	0.636	0.99
173_Y	329_Q	0.636	0.99
92_S	95_G	0.635	0.99
272_I	280_V	0.635	0.99
344_K	347_K	0.634	0.99
192_L	243_G	0.634	0.99
280_V	286_A	0.630	0.99
359_R	362_I	0.630	0.99
360_A	420_F	0.629	0.99
53_D	60_R	0.627	0.99
87_I	94_A	0.626	0.99
323_D	326_K	0.626	0.99
260_I	263_L	0.623	0.99
88_I	95_G	0.622	0.99
372_L	380_I	0.620	0.99
205_A	208_I	0.619	0.99
63_E	364_G	0.616	0.99
58_L	61_F	0.615	0.99
233_K	242_E	0.613	0.99
396_I	421_S	0.610	0.99
24_K	315_D	0.608	0.99
167_V	236_T	0.608	0.99
398_T	413_M	0.607	0.99
142_P	248_Y	0.607	0.99
398_T	402_N	0.606	0.99
141_V	147_I	0.605	0.99
326_K	398_T	0.603	0.99
300_S	304_D	0.602	0.99
36_F	99_I	0.601	0.99
35_K	92_S	0.601	0.99
417_H	422_E	0.601	0.99
277_Y	316_A	0.601	0.99
113_I	283_N	0.601	0.99
254_P	267_I	0.600	0.99
242_E	245_V	0.600	0.99
358_T	362_I	0.600	0.99
144_I	226_I	0.599	0.99
84_R	87_I	0.598	0.99
354_F	420_F	0.598	0.99
147_I	248_Y	0.597	0.99
408_E	412_L	0.596	0.99
359_R	363_N	0.596	0.99
237_E	240_E	0.595	0.99
393_L	420_F	0.593	0.99
52_F	56_F	0.593	0.99
23_R	102_S	0.591	0.99
334_D	365_F	0.590	0.99
55_T	185_L	0.590	0.99
4_D	29_L	0.589	0.99
402_N	413_M	0.589	0.99
370_V	427_A	0.588	0.99
187_S	244_N	0.586	0.98
175_G	249_A	0.586	0.98
60_R	63_E	0.585	0.98
143_S	148_E	0.585	0.98
147_I	229_I	0.585	0.98
175_G	199_P	0.584	0.98
324_N	327_I	0.583	0.98
326_K	340_V	0.582	0.98
383_G	424_I	0.582	0.98
5_I	17_A	0.582	0.98
117_S	131_L	0.581	0.98
223_N	237_E	0.581	0.98
352_F	356_A	0.581	0.98
32_E	106_T	0.580	0.98
55_T	58_L	0.579	0.98
219_N	222_E	0.577	0.98
235_I	242_E	0.576	0.98
383_G	394_I	0.575	0.98
111_V	119_V	0.573	0.98
84_R	91_L	0.573	0.98
229_I	248_Y	0.573	0.98
303_L	322_I	0.572	0.98
114_I	262_I	0.572	0.98
153_E	174_A	0.571	0.98
163_P	187_S	0.570	0.98
401_V	405_I	0.570	0.98
35_K	42_N	0.569	0.98
129_D	283_N	0.568	0.98
169_I	192_L	0.568	0.98
56_F	334_D	0.568	0.98
361_I	366_K	0.568	0.98
7_I	28_V	0.568	0.98
98_L	102_S	0.567	0.98
56_F	336_Q	0.565	0.98
180_Q	334_D	0.564	0.98
33_K	255_Q	0.563	0.98
39_V	153_E	0.562	0.98
354_F	357_T	0.562	0.98
300_S	324_N	0.562	0.98
137_S	296_K	0.561	0.98
46_V	358_T	0.560	0.98
302_I	425_V	0.560	0.98
22_A	27_K	0.559	0.98
193_S	226_I	0.558	0.98
111_V	121_V	0.557	0.98
224_I	236_T	0.557	0.98
384_E	397_L	0.553	0.98
203_E	206_R	0.553	0.98
133_I	272_I	0.552	0.98
310_L	316_A	0.552	0.98
37_G	40_C	0.552	0.98
395_N	398_T	0.551	0.98
346_A	350_S	0.549	0.98
303_L	425_V	0.548	0.98
36_F	96_R	0.548	0.98
267_I	272_I	0.547	0.98
142_P	146_G	0.547	0.98
153_E	252_R	0.546	0.98
117_S	129_D	0.546	0.98
57_L	61_F	0.545	0.98
178_I	181_M	0.545	0.98
104_G	109_G	0.545	0.98
115_S	262_I	0.545	0.98
258_K	261_E	0.544	0.98
166_M	189_V	0.543	0.98
287_I	305_A	0.542	0.97
366_K	388_D	0.537	0.97
167_V	246_I	0.537	0.97
119_V	131_L	0.537	0.97
154_D	252_R	0.536	0.97
154_D	157_V	0.535	0.97
146_G	229_I	0.534	0.97
143_S	146_G	0.533	0.97
209_I	213_L	0.532	0.97
132_I	309_S	0.532	0.97
363_N	420_F	0.531	0.97
388_D	420_F	0.530	0.97
40_C	49_I	0.529	0.97
3_Y	126_V	0.529	0.97
374_I	380_I	0.528	0.97
394_I	416_V	0.528	0.97
351_V	379_E	0.528	0.97
385_V	394_I	0.527	0.97
116_P	121_V	0.527	0.97
89_D	92_S	0.526	0.97
197_I	206_R	0.526	0.97
176_V	220_I	0.525	0.97
334_D	388_D	0.525	0.97
77_K	161_S	0.525	0.97
201_F	337_V	0.524	0.97
342_N	373_G	0.523	0.97
35_K	108_L	0.523	0.97
183_S	217_G	0.522	0.97
22_A	28_V	0.522	0.97
354_F	360_A	0.520	0.97
88_I	92_S	0.519	0.97
116_P	282_N	0.519	0.97
118_T	121_V	0.519	0.97
178_I	247_V	0.518	0.97
83_K	364_G	0.518	0.97
287_I	312_I	0.517	0.97
144_I	229_I	0.517	0.97
90_Y	94_A	0.516	0.97
119_V	126_V	0.513	0.97
76_Y	162_V	0.512	0.96
88_I	94_A	0.512	0.96
399_L	415_F	0.512	0.96
58_L	74_I	0.512	0.96
57_L	64_I	0.511	0.96
46_V	417_H	0.511	0.96
168_I	179_A	0.507	0.96
149_N	229_I	0.507	0.96
165_S	245_V	0.507	0.96
347_K	350_S	0.507	0.96
113_I	258_K	0.507	0.96
84_R	157_V	0.506	0.96
94_A	98_L	0.505	0.96
76_Y	160_N	0.503	0.96
76_Y	182_Y	0.502	0.96
40_C	47_P	0.501	0.96
196_K	199_P	0.501	0.96
352_F	423_A	0.500	0.96

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1ojtA	2	0.9798	100	0.265	Contact Map
3ladA	2	0.9731	100	0.265	Contact Map
1lvlA	2	0.9709	100	0.271	Contact Map
2wpfA	2	0.9753	100	0.277	Contact Map
2hqmA	2	0.9529	100	0.277	Contact Map
3ic9A	2	0.9776	100	0.278	Contact Map
3o0hA	2	0.9753	100	0.279	Contact Map
3dk9A	2	0.9507	100	0.28	Contact Map
2eq6A	2	0.9709	100	0.28	Contact Map
2r9zA	2	0.9641	100	0.28	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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