Q97YY1 - SULSO - GREMLIN Contacts

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Q97YY1 - Maltose ABC transporter

UniProt:	Q97YY1	Sequences: MGRKGKKIDYKAISKTLVAVIIVVVIVIAIGGVYAFLSSQHSPAAPSSTTTSFTSTTSSTTTSSVLNTSNPQALMQLVGISTPPSTPVTITVWNSYSTSENQAFNETLAQFEQAFPWIHVQVTYGVGVGTSQFETAAKAGQAPIVYRDTSDSGGALFAAGLVLNLSQYLPQSITSLYVPTAIKDWELNGSLYGLPDNVNYIVMFYNKKFVPYPPNTTEQLVQIAESVNKTYHVWGIAYGAGDEYGYRFAAWFAGFGGQIFTTNNGKIVPALNSTAMVNALNFWYNLTYNLKVNYLAPSTGAGGAEGQLFVANQTAIIFDGPWDLNAYLQALGPNLGAAPLPVVSQTGLRAAPFIGSTGFLVSSPQASGATPLQIKAALLFVLYFTNYQADLRLWEVAHDIPANLQAYNEALTQLKEGMLQPTYLNQIMEGILEQAQYGQQFPNIPQMAYYWNSFHQYASEFFANKVNATQASQGMEQAFIQALVQNGLMSSLSPLPIIPQYMLLLISVILTPMVVVITPRKRW	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	523 (412)
Sequences:	20304 (16522)
Seq/√Len:	814.0

ECOLI - UGPB MALE YCJN YDCS YNJB
BACSU - YESO CYCB MDXE YURO ARAN YTCQ MSME LIPO
HALSA - Q9HHQ8 Q9HP00
SULSO - Q97YY1 Q97ZC3 Q97UZ1 Q97UF5 Q97VC2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
89_T	121_Q	4.038	1.00
467_N	470_Q	3.681	1.00
284_Y	288_Y	3.522	1.00
208_K	334_N	3.409	1.00
163_L	374_I	3.321	1.00
277_V	469_T	3.256	1.00
89_T	119_H	3.057	1.00
164_N	190_S	2.912	1.00
207_K	211_P	2.843	1.00
281_N	285_N	2.828	1.00
221_V	285_N	2.820	1.00
91_T	121_Q	2.760	1.00
207_K	336_G	2.707	1.00
105_N	109_A	2.703	1.00
285_N	289_N	2.685	1.00
225_E	289_N	2.613	1.00
115_F	379_L	2.597	1.00
216_T	219_Q	2.583	1.00
110_Q	113_Q	2.569	1.00
473_Q	477_Q	2.499	1.00
469_T	473_Q	2.376	1.00
111_F	379_L	2.367	1.00
128_V	131_S	2.330	1.00
112_E	119_H	2.313	1.00
205_Y	336_G	2.270	1.00
477_Q	481_Q	2.268	1.00
87_P	119_H	2.239	1.00
225_E	229_K	2.235	1.00
373_Q	376_A	2.223	1.00
186_E	191_L	2.222	1.00
166_S	190_S	2.208	1.00
379_L	382_L	2.205	1.00
222_Q	226_S	2.204	1.00
179_P	183_K	2.198	1.00
118_I	376_A	2.191	1.00
274_T	278_N	2.182	1.00
106_E	109_A	2.133	1.00
219_Q	222_Q	2.113	1.00
210_V	316_I	2.101	1.00
91_T	123_T	2.082	1.00
429_E	433_E	2.017	1.00
466_V	474_G	2.011	1.00
476_E	480_I	2.004	1.00
272_N	473_Q	1.990	1.00
212_Y	215_N	1.982	1.00
110_Q	114_A	1.968	1.00
109_A	113_Q	1.946	1.00
386_N	389_A	1.938	1.00
226_S	230_T	1.934	1.00
183_K	186_E	1.929	1.00
93_W	136_A	1.923	1.00
278_N	281_N	1.900	1.00
460_E	466_V	1.884	1.00
281_N	468_A	1.880	1.00
474_G	478_A	1.863	1.00
470_Q	474_G	1.860	1.00
222_Q	225_E	1.844	1.00
281_N	469_T	1.818	1.00
176_L	405_Q	1.779	1.00
144_I	373_Q	1.778	1.00
110_Q	383_Y	1.765	1.00
391_L	395_E	1.744	1.00
162_V	360_L	1.715	1.00
301_A	304_A	1.713	1.00
88_V	376_A	1.698	1.00
460_E	465_K	1.676	1.00
365_Q	373_Q	1.676	1.00
375_K	379_L	1.675	1.00
193_G	358_G	1.665	1.00
125_G	128_V	1.661	1.00
218_E	221_V	1.649	1.00
168_Y	378_L	1.634	1.00
277_V	281_N	1.622	1.00
237_A	314_T	1.619	1.00
221_V	225_E	1.617	1.00
146_Y	362_S	1.610	1.00
452_N	456_Q	1.606	1.00
108_L	112_E	1.597	1.00
109_A	112_E	1.589	1.00
164_N	167_Q	1.588	1.00
461_F	471_A	1.584	1.00
470_Q	473_Q	1.575	1.00
453_S	478_A	1.564	1.00
163_L	363_S	1.555	1.00
474_G	477_Q	1.552	1.00
477_Q	480_I	1.550	1.00
108_L	380_F	1.542	1.00
221_V	286_L	1.540	1.00
261_T	268_V	1.530	1.00
101_N	105_N	1.530	1.00
277_V	468_A	1.524	1.00
214_P	219_Q	1.524	1.00
221_V	289_N	1.507	1.00
215_N	219_Q	1.504	1.00
88_V	373_Q	1.489	1.00
361_V	381_V	1.486	1.00
205_Y	338_A	1.483	1.00
185_W	358_G	1.482	1.00
137_A	142_A	1.482	1.00
111_F	115_F	1.469	1.00
218_E	222_Q	1.466	1.00
466_V	471_A	1.463	1.00
272_N	476_E	1.449	1.00
209_F	315_A	1.447	1.00
203_M	338_A	1.446	1.00
112_E	115_F	1.435	1.00
365_Q	377_A	1.435	1.00
365_Q	374_I	1.433	1.00
132_Q	136_A	1.429	1.00
227_V	315_A	1.424	1.00
282_F	286_L	1.422	1.00
207_K	334_N	1.407	1.00
209_F	227_V	1.400	1.00
473_Q	476_E	1.381	1.00
457_Y	474_G	1.377	1.00
387_Y	391_L	1.371	1.00
461_F	468_A	1.367	1.00
284_Y	461_F	1.363	1.00
110_Q	392_R	1.362	1.00
478_A	481_Q	1.361	1.00
111_F	118_I	1.360	1.00
144_I	365_Q	1.353	1.00
87_P	117_W	1.353	1.00
430_G	433_E	1.342	1.00
389_A	392_R	1.331	1.00
466_V	470_Q	1.329	1.00
185_W	191_L	1.327	1.00
228_N	235_G	1.305	1.00
457_Y	460_E	1.305	1.00
102_Q	105_N	1.303	1.00
94_N	122_V	1.293	1.00
308_L	313_Q	1.290	1.00
433_E	436_Q	1.277	1.00
275_A	278_N	1.277	1.00
282_F	285_N	1.253	1.00
157_F	192_Y	1.253	1.00
145_V	381_V	1.249	1.00
148_D	360_L	1.248	1.00
224_A	316_I	1.245	1.00
221_V	282_F	1.239	1.00
111_F	383_Y	1.231	1.00
457_Y	466_V	1.229	1.00
112_E	116_P	1.228	1.00
29_A	32_G	1.228	1.00
309_F	335_L	1.226	1.00
23_V	27_V	1.222	1.00
102_Q	106_E	1.222	1.00
111_F	380_F	1.211	1.00
392_R	396_V	1.210	1.00
362_S	365_Q	1.205	1.00
210_V	223_I	1.205	1.00
223_I	226_S	1.204	1.00
261_T	267_I	1.203	1.00
233_V	313_Q	1.198	1.00
203_M	316_I	1.194	1.00
225_E	291_K	1.185	1.00
218_E	344_S	1.184	1.00
363_S	374_I	1.183	1.00
376_A	379_L	1.180	1.00
383_Y	389_A	1.179	1.00
106_E	110_Q	1.174	1.00
108_L	122_V	1.172	1.00
118_I	379_L	1.161	1.00
228_N	291_K	1.159	1.00
380_F	384_F	1.152	1.00
344_S	347_G	1.152	1.00
172_S	382_L	1.152	1.00
220_L	316_I	1.152	1.00
220_L	224_A	1.150	1.00
405_Q	408_N	1.146	1.00
361_V	378_L	1.135	1.00
163_L	365_Q	1.134	1.00
456_Q	478_A	1.125	1.00
160_G	363_S	1.125	1.00
145_V	377_A	1.124	1.00
209_F	233_V	1.116	1.00
202_V	337_A	1.112	1.00
14_S	17_L	1.107	1.00
167_Q	170_P	1.106	1.00
14_S	18_V	1.105	1.00
88_V	117_W	1.095	1.00
157_F	187_L	1.083	1.00
304_A	307_Q	1.080	1.00
285_N	288_Y	1.079	1.00
224_A	291_K	1.078	1.00
380_F	383_Y	1.076	1.00
133_F	146_Y	1.073	1.00
457_Y	475_M	1.064	1.00
307_Q	311_A	1.057	1.00
284_Y	468_A	1.055	1.00
450_Y	479_F	1.054	1.00
425_N	429_E	1.053	1.00
258_Q	262_T	1.049	1.00
92_V	359_F	1.048	1.00
170_P	174_T	1.047	1.00
456_Q	460_E	1.041	1.00
361_V	377_A	1.038	1.00
449_Y	452_N	1.034	1.00
261_T	264_N	1.030	1.00
182_I	186_E	1.029	1.00
460_E	474_G	1.027	1.00
392_R	395_E	1.018	1.00
137_A	161_L	1.016	1.00
206_N	209_F	1.015	1.00
120_V	380_F	1.014	1.00
90_I	373_Q	1.013	1.00
140_G	364_P	1.008	1.00
24_V	28_I	1.007	1.00
277_V	472_S	1.007	1.00
226_S	229_K	1.007	1.00
212_Y	219_Q	0.994	1.00
174_T	182_I	0.994	1.00
378_L	382_L	0.992	1.00
220_L	236_I	0.991	1.00
252_F	257_G	0.991	1.00
388_Q	391_L	0.988	1.00
211_P	334_N	0.986	1.00
112_E	117_W	0.983	1.00
90_I	380_F	0.977	1.00
374_I	378_L	0.977	1.00
111_F	376_A	0.976	1.00
166_S	170_P	0.963	1.00
387_Y	405_Q	0.958	1.00
146_Y	360_L	0.955	1.00
453_S	456_Q	0.955	1.00
426_Q	429_E	0.950	1.00
145_V	380_F	0.949	1.00
179_P	404_L	0.943	1.00
193_G	360_L	0.941	1.00
326_A	329_Q	0.939	1.00
234_W	294_Y	0.936	1.00
269_P	480_I	0.935	1.00
213_P	223_I	0.935	1.00
281_N	284_Y	0.934	1.00
319_D	323_D	0.932	1.00
142_A	362_S	0.932	1.00
169_L	191_L	0.931	1.00
168_Y	375_K	0.930	1.00
108_L	120_V	0.928	1.00
182_I	191_L	0.927	1.00
210_V	227_V	0.927	1.00
166_S	186_E	0.923	1.00
255_F	278_N	0.922	1.00
472_S	476_E	0.919	1.00
224_A	235_G	0.912	1.00
110_Q	388_Q	0.912	1.00
208_K	211_P	0.904	1.00
19_A	23_V	0.900	1.00
26_I	29_A	0.899	1.00
227_V	231_Y	0.899	1.00
429_E	432_L	0.897	1.00
278_N	282_F	0.897	1.00
308_L	314_T	0.886	1.00
173_I	176_L	0.885	1.00
163_L	362_S	0.885	1.00
132_Q	135_T	0.884	1.00
166_S	191_L	0.883	1.00
467_N	471_A	0.878	1.00
23_V	26_I	0.876	1.00
223_I	316_I	0.875	1.00
19_A	26_I	0.873	1.00
114_A	388_Q	0.873	1.00
453_S	457_Y	0.873	1.00
471_A	475_M	0.872	1.00
107_T	110_Q	0.871	1.00
457_Y	478_A	0.870	1.00
280_L	472_S	0.869	1.00
228_N	290_L	0.860	1.00
270_A	273_S	0.859	1.00
162_V	192_Y	0.857	1.00
146_Y	162_V	0.857	1.00
252_F	276_M	0.856	1.00
280_L	461_F	0.855	1.00
114_A	383_Y	0.855	1.00
27_V	30_I	0.855	1.00
398_H	402_A	0.854	1.00
432_L	436_Q	0.849	1.00
176_L	403_N	0.848	1.00
157_F	162_V	0.846	1.00
90_I	377_A	0.844	1.00
290_L	294_Y	0.843	1.00
409_E	412_T	0.842	1.00
90_I	376_A	0.842	1.00
274_T	277_V	0.841	1.00
88_V	118_I	0.840	1.00
398_H	401_P	0.839	1.00
258_Q	261_T	0.839	1.00
82_T	85_S	0.839	1.00
186_E	189_G	0.839	1.00
374_I	377_A	0.835	1.00
163_L	168_Y	0.834	1.00
271_L	276_M	0.833	1.00
223_I	227_V	0.830	1.00
92_V	145_V	0.828	1.00
403_N	406_A	0.827	1.00
361_V	365_Q	0.826	1.00
106_E	396_V	0.825	1.00
221_V	291_K	0.821	1.00
410_A	413_Q	0.820	1.00
453_S	475_M	0.820	1.00
178_V	404_L	0.820	1.00
451_W	455_H	0.818	1.00
472_S	475_M	0.818	1.00
213_P	338_A	0.817	1.00
263_N	267_I	0.817	1.00
202_V	431_I	0.817	1.00
32_G	35_A	0.815	1.00
22_I	28_I	0.814	1.00
130_T	152_S	0.814	1.00
377_A	381_V	0.812	1.00
388_Q	392_R	0.810	1.00
325_N	329_Q	0.803	1.00
391_L	409_E	0.799	1.00
163_L	361_V	0.798	1.00
136_A	141_Q	0.797	1.00
168_Y	374_I	0.796	1.00
232_H	235_G	0.795	1.00
103_A	106_E	0.794	1.00
457_Y	471_A	0.794	1.00
106_E	392_R	0.793	1.00
180_T	183_K	0.788	1.00
204_F	319_D	0.787	1.00
24_V	27_V	0.787	1.00
227_V	233_V	0.782	1.00
117_W	379_L	0.780	1.00
478_A	482_A	0.778	1.00
228_N	231_Y	0.778	1.00
232_H	313_Q	0.777	1.00
22_I	26_I	0.777	1.00
21_I	27_V	0.773	1.00
135_T	139_A	0.772	1.00
83_P	86_T	0.772	1.00
25_V	28_I	0.769	1.00
224_A	228_N	0.768	1.00
93_W	143_P	0.768	1.00
253_A	439_Q	0.764	1.00
280_L	471_A	0.763	1.00
286_L	291_K	0.759	1.00
399_D	402_A	0.758	1.00
449_Y	482_A	0.757	1.00
375_K	378_L	0.754	1.00
131_S	135_T	0.754	1.00
14_S	21_I	0.752	1.00
452_N	455_H	0.752	1.00
205_Y	213_P	0.751	1.00
33_V	36_F	0.750	1.00
115_F	118_I	0.750	1.00
163_L	167_Q	0.750	1.00
167_Q	171_Q	0.749	1.00
461_F	466_V	0.749	1.00
406_A	409_E	0.746	1.00
407_Y	410_A	0.743	1.00
110_Q	389_A	0.742	1.00
85_S	117_W	0.739	1.00
426_Q	430_G	0.738	1.00
177_Y	182_I	0.736	1.00
173_I	382_L	0.736	1.00
14_S	19_A	0.736	1.00
225_E	228_N	0.734	1.00
33_V	37_L	0.734	1.00
248_F	252_F	0.730	1.00
453_S	482_A	0.729	1.00
454_F	475_M	0.723	1.00
471_A	474_G	0.721	1.00
172_S	378_L	0.719	1.00
408_N	413_Q	0.718	1.00
208_K	333_P	0.717	1.00
205_Y	210_V	0.716	1.00
107_T	389_A	0.715	1.00
206_N	334_N	0.714	1.00
428_M	432_L	0.713	1.00
229_K	232_H	0.711	1.00
112_E	120_V	0.711	1.00
217_T	282_F	0.711	1.00
456_Q	459_S	0.711	1.00
20_V	24_V	0.710	1.00
22_I	25_V	0.706	1.00
171_Q	375_K	0.705	1.00
145_V	359_F	0.703	1.00
277_V	473_Q	0.703	1.00
18_V	21_I	0.699	1.00
269_P	476_E	0.696	1.00
19_A	22_I	0.694	1.00
307_Q	310_V	0.691	1.00
164_N	192_Y	0.691	1.00
199_N	357_T	0.690	1.00
273_S	276_M	0.689	1.00
397_A	401_P	0.687	1.00
90_I	365_Q	0.684	1.00
179_P	182_I	0.683	1.00
264_N	267_I	0.682	1.00
447_M	451_W	0.681	1.00
86_T	117_W	0.681	1.00
217_T	221_V	0.680	1.00
427_I	430_G	0.680	1.00
234_W	293_N	0.678	1.00
230_T	233_V	0.678	1.00
278_N	343_V	0.676	1.00
257_G	276_M	0.676	1.00
196_D	359_F	0.674	1.00
23_V	29_A	0.673	1.00
21_I	24_V	0.673	1.00
427_I	431_I	0.673	1.00
115_F	380_F	0.672	1.00
303_G	306_G	0.669	1.00
279_A	283_W	0.669	1.00
206_N	312_N	0.668	1.00
221_V	224_A	0.668	1.00
149_T	152_S	0.667	1.00
273_S	277_V	0.665	1.00
391_L	406_A	0.659	1.00
77_L	80_I	0.658	1.00
167_Q	378_L	0.658	1.00
261_T	270_A	0.658	1.00
344_S	348_L	0.654	1.00
153_G	193_G	0.653	1.00
107_T	383_Y	0.653	1.00
177_Y	385_T	0.652	1.00
300_G	308_L	0.650	1.00
213_P	219_Q	0.649	1.00
174_T	186_E	0.648	1.00
217_T	254_G	0.648	1.00
365_Q	372_L	0.647	1.00
293_N	308_L	0.646	1.00
176_L	387_Y	0.646	1.00
21_I	25_V	0.643	1.00
206_N	333_P	0.643	1.00
288_Y	464_N	0.642	1.00
271_L	479_F	0.642	1.00
137_A	362_S	0.642	1.00
153_G	162_V	0.642	1.00
168_Y	172_S	0.641	1.00
85_S	88_V	0.639	1.00
253_A	256_G	0.636	1.00
107_T	384_F	0.634	1.00
92_V	108_L	0.633	1.00
424_L	427_I	0.632	1.00
155_A	159_A	0.632	1.00
284_Y	467_N	0.626	1.00
214_P	223_I	0.626	1.00
31_G	35_A	0.626	1.00
93_W	123_T	0.624	1.00
430_G	434_Q	0.622	1.00
446_Q	449_Y	0.621	1.00
134_E	155_A	0.620	1.00
30_I	33_V	0.619	1.00
81_S	84_P	0.617	1.00
99_S	102_Q	0.615	1.00
227_V	316_I	0.615	1.00
228_N	234_W	0.613	1.00
204_F	337_A	0.610	1.00
17_L	20_V	0.609	1.00
237_A	308_L	0.606	1.00
123_T	136_A	0.606	1.00
404_L	408_N	0.606	1.00
342_V	347_G	0.605	1.00
253_A	257_G	0.604	1.00
326_A	330_A	0.603	1.00
263_N	268_V	0.602	1.00
112_E	118_I	0.602	1.00
209_F	231_Y	0.601	1.00
204_F	335_L	0.601	1.00
241_G	301_A	0.601	1.00
92_V	147_R	0.600	1.00
156_L	162_V	0.599	1.00
20_V	23_V	0.599	1.00
153_G	157_F	0.597	1.00
30_I	35_A	0.595	1.00
163_L	378_L	0.595	1.00
272_N	472_S	0.594	1.00
154_G	158_A	0.594	1.00
435_A	438_G	0.593	1.00
168_Y	171_Q	0.592	1.00
468_A	472_S	0.591	1.00
359_F	384_F	0.591	1.00
233_V	315_A	0.589	1.00
131_S	134_E	0.588	1.00
448_A	452_N	0.585	1.00
90_I	145_V	0.585	1.00
16_T	27_V	0.585	1.00
104_F	107_T	0.585	1.00
273_S	476_E	0.584	1.00
212_Y	223_I	0.584	1.00
398_H	404_L	0.583	1.00
425_N	428_M	0.583	1.00
204_F	324_L	0.582	1.00
303_G	307_Q	0.581	1.00
305_E	317_I	0.581	1.00
397_A	402_A	0.581	1.00
227_V	230_T	0.580	1.00
167_Q	190_S	0.580	1.00
409_E	413_Q	0.579	1.00
438_G	441_F	0.578	1.00
87_P	115_F	0.578	1.00
287_T	292_V	0.576	1.00
283_W	287_T	0.576	1.00
115_F	376_A	0.574	1.00
87_P	118_I	0.574	1.00
23_V	28_I	0.574	1.00
324_L	328_L	0.574	1.00
148_D	156_L	0.573	1.00
16_T	21_I	0.573	1.00
308_L	311_A	0.572	1.00
158_A	188_N	0.572	1.00
36_F	39_S	0.570	1.00
284_Y	287_T	0.570	1.00
152_S	155_A	0.570	1.00
237_A	305_E	0.569	1.00
387_Y	390_D	0.569	1.00
255_F	282_F	0.566	1.00
129_G	133_F	0.566	1.00
251_W	279_A	0.564	1.00
431_I	435_A	0.564	1.00
458_A	462_F	0.562	1.00
163_L	364_P	0.562	1.00
17_L	21_I	0.561	1.00
80_I	83_P	0.561	1.00
90_I	120_V	0.560	1.00
342_V	348_L	0.560	1.00
123_T	132_Q	0.559	1.00
126_V	130_T	0.559	1.00
203_M	318_F	0.559	1.00
26_I	30_I	0.558	1.00
161_L	164_N	0.557	1.00
408_N	412_T	0.556	1.00
165_L	381_V	0.555	1.00
224_A	286_L	0.555	1.00
309_F	317_I	0.554	1.00
87_P	112_E	0.554	1.00
310_V	330_A	0.553	1.00
215_N	220_L	0.553	1.00
107_T	392_R	0.550	1.00
258_Q	263_N	0.550	1.00
275_A	279_A	0.550	1.00
210_V	315_A	0.550	1.00
21_I	28_I	0.549	1.00
228_N	233_V	0.547	1.00
103_A	107_T	0.546	1.00
24_V	29_A	0.546	1.00
136_A	143_P	0.545	1.00
117_W	376_A	0.544	1.00
35_A	38_S	0.544	1.00
459_S	463_A	0.544	1.00
88_V	115_F	0.543	1.00
289_N	292_V	0.543	1.00
215_N	342_V	0.543	1.00
21_I	26_I	0.543	1.00
457_Y	461_F	0.542	1.00
219_Q	223_I	0.542	1.00
425_N	432_L	0.542	1.00
468_A	471_A	0.542	1.00
480_I	483_L	0.542	1.00
359_F	381_V	0.541	1.00
405_Q	409_E	0.541	1.00
469_T	472_S	0.540	1.00
460_E	471_A	0.539	1.00
269_P	479_F	0.539	1.00
228_N	232_H	0.539	1.00
387_Y	403_N	0.539	1.00
128_V	132_Q	0.538	1.00
90_I	144_I	0.538	1.00
208_K	312_N	0.538	1.00
119_H	122_V	0.536	1.00
173_I	178_V	0.535	1.00
274_T	469_T	0.533	1.00
169_L	378_L	0.532	1.00
130_T	155_A	0.532	1.00
386_N	390_D	0.531	1.00
439_Q	442_P	0.531	1.00
20_V	27_V	0.530	1.00
401_P	407_Y	0.528	1.00
33_V	38_S	0.527	1.00
165_L	378_L	0.527	1.00
91_T	143_P	0.526	1.00
461_F	475_M	0.526	1.00
135_T	138_K	0.526	1.00
276_M	279_A	0.526	1.00
305_E	314_T	0.524	1.00
92_V	380_F	0.523	1.00
218_E	282_F	0.523	1.00
475_M	479_F	0.523	1.00
194_L	378_L	0.522	1.00
175_S	178_V	0.522	1.00
325_N	328_L	0.521	1.00
87_P	116_P	0.520	1.00
286_L	292_V	0.519	1.00
144_I	372_L	0.518	1.00
112_E	380_F	0.518	1.00
426_Q	435_A	0.517	1.00
16_T	19_A	0.516	1.00
276_M	280_L	0.513	1.00
373_Q	377_A	0.513	1.00
154_G	187_L	0.512	1.00
92_V	122_V	0.512	1.00
185_W	193_G	0.512	1.00
114_A	386_N	0.512	1.00
425_N	430_G	0.511	1.00
432_L	435_A	0.511	1.00
343_V	347_G	0.511	1.00
378_L	381_V	0.510	1.00
18_V	25_V	0.510	1.00
126_V	129_G	0.509	1.00
284_Y	464_N	0.508	1.00
233_V	237_A	0.508	1.00
293_N	296_A	0.507	1.00
142_A	364_P	0.506	1.00
28_I	32_G	0.506	1.00
32_G	36_F	0.505	1.00
144_I	374_I	0.505	1.00
361_V	374_I	0.504	1.00
272_N	276_M	0.504	1.00
166_S	378_L	0.504	1.00
253_A	258_Q	0.504	1.00
246_Y	250_A	0.503	1.00
181_A	198_V	0.502	1.00
433_E	437_Y	0.502	1.00
79_G	82_T	0.501	1.00
323_D	326_A	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4r2fA	1	0.7094	100	0.347	Contact Map
4r9fA	1	0.7094	100	0.358	Contact Map
3uorA	1	0.7304	100	0.365	Contact Map
4mfiA	1	0.738	100	0.377	Contact Map
4r6kA	1	0.7228	100	0.384	Contact Map
2xd3A	1	0.6979	100	0.395	Contact Map
4ovjA	1	0.7208	100	0.401	Contact Map
3vxbA	1	0.7075	100	0.402	Contact Map
4r6hA	1	0.717	100	0.406	Contact Map
2zyoA	1	0.7208	100	0.407	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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