Q97YX9 - SULSO - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

Q97YX9 - Amino acid permease related protein

UniProt:	Q97YX9	Sequences: MSRRKLSVFEAFSLSFGGQAPFTSIITFGTIGLQLGGSFLTIATIIGTILVLVNGIVIYRLSLRYSQHGGYFTYAFYSLTERLGLVTGWLFLLYAFSYGGTLLAGSIYIITSYLKISADLVAFLVILFSAFLVIRGLDVSVKYAEFISIAEIVAIIVSSVVLLLGTKPSFNLTIPTNPFLVILYAIGMPIGYGNLNPMSEDIKNAKKIVGIITVIVILLGGLLSALLFYASALYGTDLIEILLDKVGFIFPYLIFSALNGGILGGIAYIIAMSRILHAMSLKNLMPSIISSVKYNRPYNAEVISLIIYTVILFLLTHFVGLYTTFLVLGGLTVLSYLIISLSANLSLFRIALKKLRKRKMEITIAITSTLLSLIILVYSIQENTPIINYIFFAWIIAGFIYAEVLEIAGNNGKDDED	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	417 (399)
Sequences:	24522 (16341)
Seq/√Len:	818.1

ECOLI - PUUP PROY PLAP POTE AROP FRLA YIFK MMUP LYSP ADIC GABP CYCA ANSP YCAM CADB PHEP YJEM ARCD YGJI GADC YJEH YBAT
BACSU - YBXG YBGF YHDG YTNA YFNA ASPP HUTM GABP ROCC YDGF STET ROCE YVBW YBEC YCGH YECA AAPA ARCD YDAO YNDE GERBB GERAB GERKB
HALSA - Q9HHU7 Q9HQB3 Q9HSL5
SULSO - Q97YX9 Q97U05 Q97YN3 Q97XM0 Q7LXI7 Q97ZB5 Q97VA8 Q97WD4 Q97X49 Q97Y76 Q97VA6 Q97WS3 Q97Z63 Q97U33 Q97VR4 Q97U39

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
288_I	299_N	4.420	1.00
130_A	305_L	4.379	1.00
291_S	299_N	3.157	1.00
48_T	221_G	3.073	1.00
207_K	211_I	2.997	1.00
7_S	203_K	2.872	1.00
204_N	207_K	2.758	1.00
202_I	208_I	2.710	1.00
293_K	298_Y	2.705	1.00
88_G	279_M	2.639	1.00
347_L	351_A	2.624	1.00
288_I	291_S	2.596	1.00
162_L	230_A	2.580	1.00
72_F	282_K	2.568	1.00
280_S	290_S	2.528	1.00
123_F	309_T	2.462	1.00
160_V	164_L	2.343	1.00
12_F	215_I	2.315	1.00
337_L	340_S	2.304	1.00
8_V	215_I	2.269	1.00
201_D	274_R	2.262	1.00
200_E	281_L	2.197	1.00
240_E	243_L	2.173	1.00
131_F	135_R	2.166	1.00
364_I	368_S	2.164	1.00
277_H	281_L	2.135	1.00
76_F	84_G	2.109	1.00
11_A	202_I	2.108	1.00
127_L	309_T	2.084	1.00
134_I	298_Y	2.048	1.00
302_V	306_I	2.041	1.00
8_V	208_I	2.038	1.00
123_F	312_L	2.030	1.00
138_D	142_K	2.018	1.00
211_I	215_I	1.993	1.00
337_L	343_A	1.986	1.00
130_A	301_E	1.965	1.00
8_V	12_F	1.960	1.00
122_A	312_L	1.953	1.00
7_S	10_E	1.947	1.00
249_I	252_Y	1.938	1.00
149_I	153_V	1.934	1.00
92_L	304_S	1.921	1.00
76_F	81_E	1.909	1.00
352_L	355_L	1.901	1.00
361_E	364_I	1.900	1.00
366_I	370_L	1.885	1.00
174_I	178_P	1.881	1.00
340_S	343_A	1.875	1.00
240_E	244_D	1.863	1.00
289_I	303_I	1.848	1.00
372_S	375_I	1.843	1.00
400_I	404_V	1.819	1.00
363_T	367_T	1.799	1.00
75_A	87_T	1.794	1.00
31_I	40_L	1.784	1.00
283_N	287_S	1.775	1.00
49_I	53_V	1.756	1.00
172_L	175_P	1.733	1.00
127_L	305_L	1.731	1.00
322_Y	325_F	1.679	1.00
80_T	83_L	1.676	1.00
334_L	337_L	1.672	1.00
12_F	219_L	1.667	1.00
399_F	403_E	1.666	1.00
204_N	208_I	1.662	1.00
10_E	145_E	1.659	1.00
126_I	308_Y	1.649	1.00
134_I	302_V	1.647	1.00
133_V	266_I	1.640	1.00
392_F	396_I	1.634	1.00
354_K	357_K	1.630	1.00
368_S	372_S	1.623	1.00
214_V	218_L	1.610	1.00
153_V	157_V	1.603	1.00
361_E	368_S	1.597	1.00
398_G	401_Y	1.595	1.00
375_I	378_Y	1.594	1.00
348_F	351_A	1.581	1.00
82_R	402_A	1.563	1.00
109_I	121_V	1.553	1.00
293_K	296_R	1.550	1.00
370_L	374_I	1.548	1.00
43_A	181_V	1.548	1.00
15_S	216_V	1.537	1.00
6_L	10_E	1.529	1.00
79_L	83_L	1.522	1.00
238_L	247_G	1.510	1.00
89_W	398_G	1.488	1.00
55_G	217_I	1.476	1.00
272_M	304_S	1.467	1.00
198_M	270_I	1.459	1.00
276_L	300_A	1.458	1.00
393_A	396_I	1.453	1.00
277_H	292_V	1.447	1.00
102_L	106_S	1.440	1.00
154_A	256_S	1.434	1.00
353_K	357_K	1.432	1.00
365_A	369_T	1.422	1.00
130_A	302_V	1.422	1.00
47_G	185_A	1.414	1.00
123_F	127_L	1.409	1.00
163_L	230_A	1.408	1.00
243_L	250_F	1.398	1.00
340_S	344_N	1.387	1.00
238_L	246_V	1.378	1.00
168_P	171_N	1.367	1.00
349_R	352_L	1.366	1.00
173_T	177_N	1.365	1.00
39_F	174_I	1.364	1.00
174_I	177_N	1.362	1.00
299_N	303_I	1.362	1.00
348_F	352_L	1.362	1.00
287_S	290_S	1.360	1.00
204_N	211_I	1.360	1.00
126_I	305_L	1.349	1.00
10_E	141_V	1.347	1.00
166_T	233_L	1.345	1.00
65_Y	77_Y	1.342	1.00
242_L	247_G	1.339	1.00
159_S	226_L	1.336	1.00
377_V	381_Q	1.336	1.00
273_S	301_E	1.333	1.00
218_L	222_L	1.332	1.00
55_G	213_T	1.327	1.00
291_S	298_Y	1.327	1.00
341_L	344_N	1.325	1.00
251_P	255_F	1.324	1.00
287_S	291_S	1.323	1.00
49_I	367_T	1.321	1.00
205_A	210_G	1.316	1.00
363_T	368_S	1.315	1.00
243_L	248_F	1.289	1.00
238_L	243_L	1.285	1.00
374_I	378_Y	1.280	1.00
208_I	211_I	1.279	1.00
68_H	200_E	1.266	1.00
222_L	226_L	1.264	1.00
393_A	397_A	1.262	1.00
337_L	341_L	1.253	1.00
73_T	77_Y	1.248	1.00
236_T	240_E	1.247	1.00
56_I	214_V	1.244	1.00
389_Y	393_A	1.242	1.00
158_S	162_L	1.239	1.00
361_E	365_A	1.238	1.00
19_Q	220_G	1.230	1.00
173_T	176_T	1.222	1.00
375_I	379_S	1.215	1.00
41_T	229_Y	1.214	1.00
8_V	211_I	1.212	1.00
173_T	178_P	1.206	1.00
351_A	354_K	1.194	1.00
92_L	276_L	1.194	1.00
152_I	156_I	1.192	1.00
363_T	366_I	1.191	1.00
330_G	333_V	1.188	1.00
401_Y	405_L	1.188	1.00
53_V	367_T	1.178	1.00
129_S	265_G	1.175	1.00
237_D	245_K	1.172	1.00
394_W	398_G	1.168	1.00
376_L	379_S	1.167	1.00
15_S	195_L	1.164	1.00
67_Q	73_T	1.161	1.00
62_S	74_Y	1.158	1.00
336_Y	340_S	1.156	1.00
385_P	388_N	1.156	1.00
103_L	107_I	1.140	1.00
327_V	330_G	1.137	1.00
101_T	104_A	1.126	1.00
276_L	285_M	1.115	1.00
58_I	71_Y	1.109	1.00
389_Y	392_F	1.107	1.00
9_F	13_S	1.107	1.00
380_I	383_N	1.106	1.00
348_F	355_L	1.103	1.00
384_T	387_I	1.103	1.00
328_L	332_T	1.098	1.00
6_L	11_A	1.089	1.00
299_N	302_V	1.089	1.00
60_R	63_L	1.087	1.00
203_K	208_I	1.086	1.00
385_P	389_Y	1.086	1.00
120_L	124_L	1.081	1.00
6_L	141_V	1.079	1.00
281_L	290_S	1.078	1.00
85_L	89_W	1.078	1.00
98_Y	308_Y	1.077	1.00
143_Y	147_I	1.075	1.00
5_K	203_K	1.075	1.00
373_L	377_V	1.072	1.00
144_A	266_I	1.069	1.00
102_L	265_G	1.067	1.00
82_R	399_F	1.063	1.00
132_L	143_Y	1.063	1.00
322_Y	337_L	1.061	1.00
142_K	146_F	1.060	1.00
329_G	337_L	1.059	1.00
350_I	353_K	1.051	1.00
57_V	365_A	1.048	1.00
386_I	389_Y	1.046	1.00
362_I	366_I	1.045	1.00
371_L	378_Y	1.039	1.00
320_G	323_T	1.038	1.00
130_A	134_I	1.032	1.00
14_L	198_M	1.029	1.00
318_F	321_L	1.022	1.00
306_I	310_V	1.014	1.00
371_L	375_I	1.014	1.00
349_R	353_K	1.013	1.00
333_V	336_Y	1.007	1.00
32_G	40_L	1.002	1.00
11_A	212_I	1.000	1.00
321_L	324_T	1.000	1.00
20_A	23_T	0.999	1.00
105_G	258_L	0.998	1.00
390_I	393_A	0.996	1.00
291_S	294_Y	0.995	1.00
237_D	242_L	0.993	1.00
16_F	219_L	0.987	1.00
334_L	338_I	0.986	1.00
124_L	128_F	0.985	1.00
229_Y	233_L	0.982	1.00
137_L	270_I	0.980	1.00
237_D	240_E	0.980	1.00
75_A	83_L	0.980	1.00
128_F	262_I	0.979	1.00
292_V	295_N	0.973	1.00
365_A	368_S	0.972	1.00
337_L	344_N	0.968	1.00
105_G	125_V	0.964	1.00
102_L	126_I	0.957	1.00
72_F	278_A	0.956	1.00
242_L	246_V	0.956	1.00
157_V	161_V	0.950	1.00
193_G	197_P	0.947	1.00
67_Q	77_Y	0.947	1.00
339_I	343_A	0.939	1.00
351_A	355_L	0.939	1.00
117_S	120_L	0.938	1.00
45_I	225_A	0.932	1.00
352_L	357_K	0.927	1.00
372_S	376_L	0.927	1.00
348_F	357_K	0.926	1.00
239_I	243_L	0.925	1.00
347_L	350_I	0.922	1.00
13_S	145_E	0.921	1.00
199_S	209_V	0.920	1.00
147_I	263_L	0.919	1.00
99_G	102_L	0.917	1.00
69_G	73_T	0.915	1.00
156_I	160_V	0.914	1.00
369_T	373_L	0.908	1.00
60_R	349_R	0.906	1.00
94_Y	106_S	0.901	1.00
180_L	184_Y	0.901	1.00
76_F	282_K	0.900	1.00
16_F	220_G	0.896	1.00
236_T	239_I	0.894	1.00
24_S	28_F	0.893	1.00
64_R	357_K	0.889	1.00
329_G	332_T	0.888	1.00
134_I	293_K	0.887	1.00
159_S	230_A	0.886	1.00
134_I	296_R	0.883	1.00
127_L	131_F	0.882	1.00
330_G	337_L	0.880	1.00
129_S	266_I	0.877	1.00
319_V	323_T	0.876	1.00
69_G	72_F	0.869	1.00
227_L	231_S	0.868	1.00
237_D	247_G	0.868	1.00
48_T	189_P	0.868	1.00
50_L	371_L	0.867	1.00
79_L	347_L	0.861	1.00
305_L	309_T	0.857	1.00
237_D	241_I	0.856	1.00
10_E	142_K	0.855	1.00
368_S	383_N	0.854	1.00
175_P	178_P	0.854	1.00
344_N	347_L	0.853	1.00
269_I	305_L	0.851	1.00
221_G	225_A	0.850	1.00
322_Y	326_L	0.850	1.00
131_F	134_I	0.848	1.00
238_L	241_I	0.848	1.00
401_Y	404_V	0.847	1.00
41_T	232_A	0.846	1.00
386_I	390_I	0.845	1.00
53_V	57_V	0.845	1.00
248_F	251_P	0.844	1.00
396_I	400_I	0.842	1.00
215_I	219_L	0.842	1.00
402_A	406_E	0.841	1.00
365_A	379_S	0.838	1.00
5_K	138_D	0.838	1.00
298_Y	302_V	0.828	1.00
319_V	322_Y	0.824	1.00
376_L	380_I	0.824	1.00
325_F	329_G	0.824	1.00
82_R	86_V	0.821	1.00
361_E	367_T	0.813	1.00
142_K	145_E	0.812	1.00
79_L	342_S	0.810	1.00
89_W	285_M	0.810	1.00
119_D	123_F	0.808	1.00
95_A	99_G	0.806	1.00
371_L	374_I	0.806	1.00
101_T	264_G	0.803	1.00
331_L	334_L	0.801	1.00
289_I	299_N	0.800	1.00
159_S	163_L	0.798	1.00
329_G	333_V	0.797	1.00
237_D	246_V	0.795	1.00
397_A	401_Y	0.786	1.00
320_G	324_T	0.781	1.00
348_F	353_K	0.780	1.00
194_N	271_A	0.780	1.00
387_I	391_F	0.778	1.00
152_I	223_L	0.777	1.00
52_L	56_I	0.776	1.00
64_R	355_L	0.776	1.00
365_A	382_E	0.772	1.00
377_V	380_I	0.771	1.00
294_Y	298_Y	0.770	1.00
345_L	349_R	0.767	1.00
109_I	113_Y	0.767	1.00
135_R	139_V	0.759	1.00
374_I	377_V	0.755	1.00
362_I	365_A	0.752	1.00
355_L	358_R	0.751	1.00
121_V	124_L	0.750	1.00
103_L	106_S	0.750	1.00
151_E	260_G	0.747	1.00
42_I	46_I	0.747	1.00
285_M	289_I	0.744	1.00
338_I	369_T	0.741	1.00
338_I	342_S	0.736	1.00
52_L	214_V	0.735	1.00
306_I	309_T	0.735	1.00
94_Y	105_G	0.735	1.00
9_F	145_E	0.732	1.00
323_T	327_V	0.732	1.00
323_T	326_L	0.728	1.00
368_S	371_L	0.726	1.00
8_V	212_I	0.725	1.00
336_Y	339_I	0.725	1.00
344_N	348_F	0.722	1.00
371_L	377_V	0.720	1.00
80_T	403_E	0.720	1.00
129_S	269_I	0.719	1.00
57_V	341_L	0.718	1.00
126_I	312_L	0.716	1.00
9_F	142_K	0.712	1.00
98_Y	102_L	0.711	1.00
337_L	345_L	0.711	1.00
237_D	243_L	0.710	1.00
331_L	335_S	0.709	1.00
326_L	329_G	0.708	1.00
161_V	165_G	0.708	1.00
280_S	289_I	0.707	1.00
338_I	341_L	0.707	1.00
45_I	49_I	0.701	1.00
365_A	380_I	0.700	1.00
400_I	403_E	0.697	1.00
317_H	321_L	0.697	1.00
388_N	391_F	0.693	1.00
242_L	245_K	0.693	1.00
101_T	107_I	0.693	1.00
341_L	345_L	0.691	1.00
102_L	107_I	0.691	1.00
332_T	337_L	0.690	1.00
209_V	213_T	0.688	1.00
158_S	242_L	0.686	1.00
219_L	223_L	0.686	1.00
5_K	137_L	0.686	1.00
239_I	247_G	0.685	1.00
97_S	102_L	0.683	1.00
340_S	345_L	0.680	1.00
123_F	313_F	0.680	1.00
397_A	400_I	0.676	1.00
87_T	339_I	0.676	1.00
141_V	145_E	0.674	1.00
28_F	31_I	0.674	1.00
113_Y	116_I	0.672	1.00
210_G	213_T	0.672	1.00
340_S	350_I	0.672	1.00
353_K	356_R	0.671	1.00
238_L	245_K	0.668	1.00
236_T	247_G	0.668	1.00
40_L	228_F	0.667	1.00
95_A	104_A	0.666	1.00
21_P	224_S	0.666	1.00
200_E	277_H	0.666	1.00
68_H	277_H	0.665	1.00
77_Y	352_L	0.663	1.00
42_I	45_I	0.663	1.00
61_L	74_Y	0.663	1.00
375_I	380_I	0.663	1.00
379_S	383_N	0.662	1.00
99_G	106_S	0.661	1.00
12_F	212_I	0.661	1.00
387_I	395_I	0.657	1.00
350_I	354_K	0.657	1.00
100_G	187_G	0.656	1.00
226_L	230_A	0.653	1.00
51_V	192_Y	0.649	1.00
322_Y	329_G	0.648	1.00
72_F	76_F	0.648	1.00
364_I	367_T	0.646	1.00
327_V	337_L	0.645	1.00
392_F	395_I	0.644	1.00
365_A	383_N	0.643	1.00
133_V	270_I	0.643	1.00
28_F	228_F	0.641	1.00
172_L	178_P	0.640	1.00
367_T	370_L	0.640	1.00
388_N	392_F	0.639	1.00
129_S	262_I	0.638	1.00
110_I	118_A	0.638	1.00
106_S	121_V	0.637	1.00
269_I	273_S	0.637	1.00
395_I	399_F	0.637	1.00
159_S	227_L	0.637	1.00
104_A	107_I	0.637	1.00
390_I	394_W	0.635	1.00
239_I	242_L	0.635	1.00
26_I	104_A	0.635	1.00
109_I	258_L	0.635	1.00
384_T	388_N	0.635	1.00
166_T	230_A	0.634	1.00
388_N	394_W	0.633	1.00
274_R	277_H	0.632	1.00
17_G	148_S	0.631	1.00
97_S	100_G	0.630	1.00
273_S	300_A	0.630	1.00
41_T	225_A	0.629	1.00
19_Q	216_V	0.628	1.00
339_I	342_S	0.627	1.00
334_L	341_L	0.624	1.00
336_Y	341_L	0.623	1.00
100_G	104_A	0.623	1.00
137_L	198_M	0.622	1.00
204_N	210_G	0.621	1.00
327_V	340_S	0.621	1.00
335_S	340_S	0.620	1.00
24_S	27_T	0.620	1.00
379_S	382_E	0.620	1.00
289_I	300_A	0.619	1.00
108_Y	257_A	0.619	1.00
18_G	267_A	0.619	1.00
41_T	45_I	0.616	1.00
139_V	142_K	0.614	1.00
12_F	15_S	0.614	1.00
347_L	353_K	0.614	1.00
20_A	151_E	0.614	1.00
317_H	320_G	0.613	1.00
57_V	368_S	0.613	1.00
18_G	268_Y	0.612	1.00
20_A	25_I	0.611	1.00
172_L	176_T	0.611	1.00
361_E	371_L	0.610	1.00
201_D	292_V	0.609	1.00
150_A	154_A	0.607	1.00
55_G	192_Y	0.607	1.00
162_L	166_T	0.606	1.00
163_L	226_L	0.605	1.00
322_Y	340_S	0.605	1.00
394_W	397_A	0.605	1.00
372_S	378_Y	0.604	1.00
16_F	148_S	0.601	1.00
329_G	334_L	0.600	1.00
37_G	232_A	0.596	1.00
215_I	218_L	0.595	1.00
99_G	104_A	0.594	1.00
361_E	378_Y	0.592	1.00
288_I	303_I	0.592	1.00
361_E	379_S	0.591	1.00
172_L	177_N	0.590	1.00
343_A	347_L	0.588	1.00
387_I	398_G	0.587	1.00
133_V	301_E	0.587	1.00
403_E	406_E	0.586	1.00
24_S	227_L	0.586	1.00
260_G	263_L	0.584	1.00
352_L	356_R	0.583	1.00
332_T	336_Y	0.583	1.00
328_L	331_L	0.581	1.00
102_L	105_G	0.579	1.00
388_N	402_A	0.579	1.00
327_V	333_V	0.579	1.00
164_L	167_K	0.578	1.00
391_F	395_I	0.578	1.00
82_R	403_E	0.577	1.00
59_Y	63_L	0.576	1.00
141_V	266_I	0.574	1.00
78_S	343_A	0.573	1.00
241_I	247_G	0.572	1.00
272_M	276_L	0.572	1.00
288_I	292_V	0.571	1.00
190_I	193_G	0.570	1.00
61_L	78_S	0.570	1.00
378_Y	381_Q	0.569	1.00
39_F	173_T	0.568	1.00
101_T	106_S	0.568	1.00
325_F	330_G	0.568	1.00
72_F	88_G	0.566	1.00
136_G	139_V	0.566	1.00
322_Y	327_V	0.566	1.00
98_Y	101_T	0.564	1.00
378_Y	382_E	0.564	1.00
170_F	232_A	0.563	1.00
274_R	297_P	0.562	1.00
64_R	358_R	0.562	1.00
106_S	122_A	0.561	1.00
62_S	196_N	0.560	1.00
5_K	9_F	0.558	1.00
125_V	265_G	0.558	1.00
112_S	254_I	0.558	1.00
36_G	39_F	0.557	1.00
62_S	209_V	0.555	1.00
380_I	388_N	0.554	1.00
385_P	392_F	0.553	1.00
351_A	357_K	0.552	1.00
297_P	300_A	0.549	1.00
344_N	350_I	0.549	1.00
44_T	188_M	0.548	1.00
23_T	31_I	0.547	1.00
391_F	402_A	0.547	1.00
276_L	303_I	0.546	1.00
72_F	84_G	0.546	1.00
126_I	309_T	0.546	1.00
94_Y	268_Y	0.545	1.00
127_L	130_A	0.544	1.00
398_G	402_A	0.544	1.00
148_S	151_E	0.544	1.00
196_N	213_T	0.543	1.00
324_T	327_V	0.543	1.00
252_Y	256_S	0.541	1.00
332_T	343_A	0.540	1.00
325_F	337_L	0.540	1.00
70_G	196_N	0.539	1.00
111_T	115_K	0.539	1.00
205_A	208_I	0.539	1.00
15_S	19_Q	0.539	1.00
330_G	340_S	0.538	1.00
239_I	245_K	0.537	1.00
79_L	82_R	0.537	1.00
333_V	343_A	0.536	1.00
368_S	375_I	0.534	1.00
101_T	105_G	0.534	1.00
369_T	372_S	0.534	1.00
139_V	143_Y	0.534	1.00
140_S	270_I	0.534	1.00
345_L	350_I	0.533	1.00
238_L	242_L	0.532	1.00
71_Y	193_G	0.530	1.00
94_Y	104_A	0.529	1.00
348_F	354_K	0.528	1.00
364_I	372_S	0.527	1.00
371_L	376_L	0.526	1.00
111_T	254_I	0.525	1.00
338_I	345_L	0.525	1.00
274_R	292_V	0.524	1.00
24_S	29_G	0.524	1.00
354_K	358_R	0.523	1.00
134_I	301_E	0.523	1.00
230_A	233_L	0.523	1.00
27_T	30_T	0.521	1.00
119_D	312_L	0.520	1.00
333_V	337_L	0.520	1.00
330_G	338_I	0.519	1.00
71_Y	197_P	0.519	1.00
374_I	381_Q	0.519	1.00
55_G	59_Y	0.519	1.00
202_I	209_V	0.517	1.00
21_P	28_F	0.517	1.00
84_G	88_G	0.517	1.00
110_I	114_L	0.517	1.00
11_A	198_M	0.516	1.00
334_L	340_S	0.515	1.00
393_A	400_I	0.515	1.00
325_F	340_S	0.514	1.00
361_E	366_I	0.512	1.00
364_I	383_N	0.512	1.00
321_L	327_V	0.510	1.00
402_A	405_L	0.509	1.00
326_L	340_S	0.509	1.00
369_T	379_S	0.509	1.00
359_K	362_I	0.508	1.00
207_K	210_G	0.508	1.00
391_F	396_I	0.506	1.00
332_T	340_S	0.505	1.00
395_I	398_G	0.505	1.00
219_L	226_L	0.503	1.00
310_V	313_F	0.501	1.00
183_L	187_G	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3l1lA	2	0.9568	100	0.313	Contact Map
3giaA	1	0.9688	100	0.342	Contact Map
4djkA	2	0.9305	100	0.385	Contact Map
2jlnA	1	0.9472	98.8	0.852	Contact Map
3dh4A	3	0.94	98.4	0.869	Contact Map
2xq2A	2	0.9376	98.3	0.874	Contact Map
2a65A	2	0.9616	97.9	0.886	Contact Map
4xp4A	1	0.9712	97.8	0.889	Contact Map
4wgvA	2	0.8297	96.6	0.908	Contact Map
4us3A	1	0.8777	96.3	0.911	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0135 seconds.