Q97YQ4 - SULSO - GREMLIN Contacts

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Q97YQ4 - Uncharacterized protein

UniProt:	Q97YQ4	Sequences: MLRMIGKVLELLNCKETEREINRRKFSICDDVNFILNLPIGYLKDVISPLENYLSKHMTNNFSRLTRVVPNDYEDTQLHFSKFFLNLYSSAISEIPRFNILTSLVILDEYRMMPDKALIAAADELARNGINAIFSTSTPSVFFEEEIVSRFRNRRVVSISIVNEYGQAVEGRDCVKKGEGYYQCRGSYEVIELIEDFDIRDLDYEIIKGEEVFKVKEPFTLFVNSWEKALRLYRKLREERNTEVCLLNSSDECKVTITPKIMPTRFNVVSEISSLPTIVARSGIINDKDKIYVWIDRDNYDTVTESTLNLLSNIKVCLKHPFGCNGKMGYANKTVLKPNIDERLIKRLSEISHLMDRREFEKVTEVFSDFVTVDLFTDKEKITTVPPEFVYENKKKILYYGNSCVYTYFTDGEKCSKIVYNWLEGGGVSWLKRNLARAYKNYVEEEGKKKVFLGLKARDVEEWI	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	464 (387)
Sequences:	8089 (6436)
Seq/√Len:	327.1

ECOLI - DEAD RECQ YFJK DBPA YEJH
BACSU - RECQ CSHA YPRA DBPA RECS RECG COMFA
HALSA - HELS Q9HN80 Q9HNB2
SULSO - Q97YQ4 Q97YC4 HELS Q981C8 Q97X74

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
18_E	21_I	5.638	1.00
52_N	65_L	4.494	1.00
49_P	80_F	4.486	1.00
245_C	253_C	3.665	1.00
69_V	76_T	3.552	1.00
52_N	106_I	3.527	1.00
223_V	229_A	3.309	1.00
226_W	250_S	3.246	1.00
223_V	232_L	3.155	1.00
28_I	133_I	3.108	1.00
242_T	255_V	2.772	1.00
20_E	36_L	2.751	1.00
307_T	311_L	2.676	1.00
236_L	257_I	2.606	1.00
233_Y	257_I	2.552	1.00
232_L	257_I	2.496	1.00
147_I	152_R	2.413	1.00
282_S	291_I	2.350	1.00
77_Q	81_S	2.292	1.00
262_M	266_F	2.279	1.00
67_R	80_F	2.274	1.00
308_L	311_L	2.268	1.00
230_L	246_L	2.264	1.00
304_T	311_L	2.247	1.00
171_G	174_C	2.245	1.00
372_T	378_D	2.218	1.00
223_V	257_I	2.208	1.00
198_D	201_D	2.187	1.00
303_V	310_L	2.176	1.00
11_L	86_N	2.170	1.00
303_V	311_L	2.166	1.00
233_Y	237_R	2.105	1.00
303_V	306_S	2.090	1.00
371_V	374_D	2.078	1.00
89_S	92_I	2.053	1.00
382_I	388_E	2.017	1.00
32_V	157_V	1.991	1.00
17_T	21_I	1.959	1.00
36_L	135_S	1.957	1.00
371_V	377_T	1.950	1.00
168_A	171_G	1.943	1.00
243_E	254_K	1.938	1.00
303_V	307_T	1.926	1.00
233_Y	244_V	1.921	1.00
25_K	28_I	1.919	1.00
307_T	312_S	1.901	1.00
48_S	76_T	1.876	1.00
372_T	379_K	1.853	1.00
31_D	131_N	1.837	1.00
105_V	122_A	1.825	1.00
21_I	28_I	1.814	1.00
271_E	293_V	1.810	1.00
373_V	377_T	1.753	1.00
21_I	24_R	1.745	1.00
233_Y	246_L	1.743	1.00
148_V	152_R	1.742	1.00
166_G	169_V	1.741	1.00
170_E	174_C	1.724	1.00
366_V	369_D	1.703	1.00
199_I	203_D	1.697	1.00
147_I	150_R	1.692	1.00
171_G	176_K	1.674	1.00
371_V	379_K	1.654	1.00
166_G	170_E	1.654	1.00
17_T	20_E	1.648	1.00
374_D	377_T	1.637	1.00
166_G	171_G	1.628	1.00
14_C	46_V	1.622	1.00
374_D	378_D	1.622	1.00
69_V	73_Y	1.606	1.00
307_T	310_L	1.591	1.00
372_T	377_T	1.580	1.00
344_L	347_R	1.575	1.00
48_S	135_S	1.528	1.00
374_D	379_K	1.520	1.00
258_T	262_M	1.508	1.00
378_D	381_K	1.494	1.00
16_E	21_I	1.492	1.00
148_V	151_F	1.487	1.00
371_V	378_D	1.475	1.00
236_L	244_V	1.459	1.00
170_E	173_D	1.458	1.00
79_H	82_K	1.457	1.00
24_R	28_I	1.455	1.00
90_S	94_E	1.448	1.00
147_I	151_F	1.448	1.00
382_I	386_P	1.442	1.00
90_S	93_S	1.439	1.00
373_V	378_D	1.434	1.00
20_E	28_I	1.420	1.00
303_V	312_S	1.415	1.00
173_D	176_K	1.412	1.00
304_T	312_S	1.405	1.00
88_Y	91_A	1.394	1.00
15_K	18_E	1.390	1.00
111_R	264_T	1.384	1.00
18_E	28_I	1.371	1.00
221_L	255_V	1.364	1.00
14_C	17_T	1.359	1.00
13_N	21_I	1.340	1.00
23_R	27_S	1.340	1.00
229_A	246_L	1.333	1.00
17_T	22_N	1.329	1.00
383_T	387_P	1.325	1.00
376_F	379_K	1.318	1.00
371_V	375_L	1.311	1.00
306_S	311_L	1.306	1.00
361_E	365_E	1.301	1.00
327_K	330_Y	1.297	1.00
47_I	51_E	1.293	1.00
188_Y	278_I	1.286	1.00
383_T	388_E	1.282	1.00
175_V	178_G	1.278	1.00
347_R	350_E	1.266	1.00
375_L	378_D	1.261	1.00
149_S	152_R	1.258	1.00
412_G	416_S	1.257	1.00
11_L	85_L	1.252	1.00
13_N	18_E	1.246	1.00
308_L	312_S	1.245	1.00
20_E	24_R	1.219	1.00
349_S	353_H	1.219	1.00
64_R	103_S	1.218	1.00
382_I	390_V	1.216	1.00
219_F	255_V	1.210	1.00
116_K	119_I	1.210	1.00
378_D	382_I	1.210	1.00
412_G	415_C	1.202	1.00
306_S	309_N	1.190	1.00
120_A	123_D	1.186	1.00
377_T	388_E	1.183	1.00
348_L	352_S	1.173	1.00
377_T	380_E	1.167	1.00
361_E	364_T	1.158	1.00
304_T	310_L	1.158	1.00
89_S	93_S	1.158	1.00
327_K	331_A	1.156	1.00
78_L	82_K	1.150	1.00
328_M	331_A	1.148	1.00
28_I	34_F	1.146	1.00
357_R	360_F	1.143	1.00
105_V	132_A	1.142	1.00
112_M	115_D	1.141	1.00
304_T	308_L	1.140	1.00
20_E	26_F	1.138	1.00
65_L	104_L	1.138	1.00
52_N	104_L	1.129	1.00
316_V	321_P	1.123	1.00
228_K	270_S	1.123	1.00
174_C	178_G	1.119	1.00
385_V	388_E	1.116	1.00
304_T	307_T	1.114	1.00
382_I	387_P	1.106	1.00
367_F	370_F	1.103	1.00
19_R	23_R	1.100	1.00
172_R	176_K	1.099	1.00
306_S	310_L	1.098	1.00
326_G	330_Y	1.098	1.00
387_P	390_V	1.096	1.00
364_T	370_F	1.094	1.00
377_T	381_K	1.090	1.00
324_C	327_K	1.088	1.00
328_M	332_N	1.087	1.00
146_E	152_R	1.086	1.00
363_V	366_V	1.081	1.00
372_T	375_L	1.079	1.00
222_F	262_M	1.073	1.00
410_T	414_K	1.070	1.00
380_E	388_E	1.066	1.00
14_C	18_E	1.064	1.00
228_K	232_L	1.063	1.00
337_K	340_I	1.062	1.00
322_F	331_A	1.062	1.00
63_S	102_T	1.061	1.00
318_L	324_C	1.060	1.00
362_K	370_F	1.054	1.00
375_L	379_K	1.054	1.00
220_T	258_T	1.051	1.00
325_N	329_G	1.051	1.00
27_S	159_I	1.046	1.00
222_F	281_R	1.043	1.00
364_T	368_S	1.041	1.00
91_A	94_E	1.038	1.00
324_C	331_A	1.036	1.00
198_D	203_D	1.034	1.00
231_R	235_K	1.028	1.00
321_P	326_G	1.023	1.00
382_I	385_V	1.018	1.00
347_R	351_I	1.017	1.00
244_V	257_I	1.017	1.00
294_W	297_R	1.015	1.00
326_G	329_G	1.014	1.00
324_C	328_M	1.013	1.00
234_R	238_E	1.012	1.00
121_A	124_E	1.007	1.00
201_D	205_E	1.000	1.00
88_Y	93_S	1.000	1.00
415_C	418_I	0.992	1.00
169_V	173_D	0.990	1.00
18_E	22_N	0.986	1.00
365_E	369_D	0.984	1.00
305_E	308_L	0.982	1.00
396_K	399_Y	0.977	1.00
36_L	47_I	0.974	1.00
18_E	24_R	0.972	1.00
409_F	415_C	0.968	1.00
89_S	94_E	0.967	1.00
156_V	159_I	0.964	1.00
379_K	382_I	0.961	1.00
409_F	412_G	0.961	1.00
56_K	64_R	0.960	1.00
402_N	407_T	0.957	1.00
188_Y	282_S	0.957	1.00
375_L	381_K	0.952	1.00
10_E	15_K	0.949	1.00
21_I	26_F	0.948	1.00
23_R	26_F	0.947	1.00
381_K	385_V	0.947	1.00
264_T	280_A	0.945	1.00
146_E	150_R	0.944	1.00
198_D	202_L	0.937	1.00
169_V	172_R	0.936	1.00
366_V	370_F	0.931	1.00
20_E	23_R	0.930	1.00
206_I	292_Y	0.926	1.00
272_I	281_R	0.923	1.00
221_L	232_L	0.922	1.00
46_V	79_H	0.922	1.00
383_T	386_P	0.918	1.00
408_Y	411_D	0.917	1.00
71_N	75_D	0.915	1.00
10_E	13_N	0.914	1.00
378_D	385_V	0.913	1.00
143_F	146_E	0.911	1.00
38_L	42_Y	0.911	1.00
49_P	79_H	0.908	1.00
358_R	361_E	0.903	1.00
338_P	345_I	0.903	1.00
22_N	26_F	0.902	1.00
318_L	325_N	0.899	1.00
48_S	69_V	0.899	1.00
383_T	390_V	0.894	1.00
382_I	389_F	0.891	1.00
249_S	262_M	0.890	1.00
53_Y	84_F	0.890	1.00
172_R	175_V	0.879	1.00
405_V	408_Y	0.874	1.00
356_D	360_F	0.873	1.00
169_V	174_C	0.872	1.00
315_K	321_P	0.871	1.00
71_N	264_T	0.868	1.00
401_G	404_C	0.868	1.00
198_D	270_S	0.862	1.00
320_H	327_K	0.860	1.00
197_F	200_R	0.859	1.00
359_E	362_K	0.858	1.00
167_Q	170_E	0.857	1.00
373_V	379_K	0.856	1.00
391_Y	396_K	0.851	1.00
66_T	100_I	0.849	1.00
394_K	397_I	0.847	1.00
414_K	418_I	0.845	1.00
27_S	157_V	0.844	1.00
95_I	98_F	0.841	1.00
235_K	239_E	0.836	1.00
365_E	368_S	0.836	1.00
402_N	406_Y	0.835	1.00
411_D	415_C	0.831	1.00
360_F	364_T	0.829	1.00
397_I	400_Y	0.828	1.00
303_V	308_L	0.828	1.00
365_E	370_F	0.825	1.00
347_R	353_H	0.825	1.00
343_R	347_R	0.824	1.00
33_N	132_A	0.823	1.00
340_I	348_L	0.822	1.00
398_L	408_Y	0.821	1.00
408_Y	412_G	0.820	1.00
381_K	388_E	0.819	1.00
194_I	197_F	0.819	1.00
411_D	417_K	0.817	1.00
372_T	376_F	0.816	1.00
411_D	414_K	0.814	1.00
354_L	357_R	0.812	1.00
377_T	385_V	0.811	1.00
344_L	351_I	0.810	1.00
111_R	280_A	0.804	1.00
118_L	121_A	0.801	1.00
229_A	248_N	0.799	1.00
291_I	295_I	0.799	1.00
170_E	176_K	0.799	1.00
334_T	340_I	0.798	1.00
251_D	254_K	0.796	1.00
166_G	173_D	0.795	1.00
399_Y	403_S	0.795	1.00
348_L	351_I	0.790	1.00
378_D	384_T	0.788	1.00
364_T	367_F	0.786	1.00
318_L	321_P	0.784	1.00
318_L	323_G	0.784	1.00
381_K	384_T	0.784	1.00
305_E	309_N	0.782	1.00
79_H	83_F	0.782	1.00
407_T	413_E	0.782	1.00
401_G	416_S	0.775	1.00
339_N	344_L	0.775	1.00
355_M	360_F	0.772	1.00
88_Y	92_I	0.772	1.00
229_A	257_I	0.772	1.00
118_L	122_A	0.770	1.00
400_Y	404_C	0.769	1.00
325_N	330_Y	0.768	1.00
55_S	103_S	0.767	1.00
345_I	349_S	0.766	1.00
323_G	331_A	0.765	1.00
49_P	67_R	0.764	1.00
408_Y	414_K	0.763	1.00
117_A	120_A	0.763	1.00
338_P	342_E	0.761	1.00
408_Y	416_S	0.759	1.00
399_Y	402_N	0.755	0.99
143_F	147_I	0.755	0.99
346_K	349_S	0.755	0.99
373_V	381_K	0.750	0.99
27_S	30_D	0.749	0.99
146_E	149_S	0.749	0.99
110_Y	134_F	0.748	0.99
290_K	293_V	0.746	0.99
200_R	203_D	0.745	0.99
236_L	255_V	0.744	0.99
355_M	358_R	0.744	0.99
401_G	408_Y	0.743	0.99
343_R	349_S	0.742	0.99
270_S	294_W	0.742	0.99
116_K	121_A	0.741	0.99
404_C	411_D	0.740	0.99
48_S	51_E	0.739	0.99
380_E	383_T	0.739	0.99
203_D	206_I	0.739	0.99
176_K	188_Y	0.736	0.99
49_P	84_F	0.736	0.99
232_L	235_K	0.733	0.99
168_A	172_R	0.732	0.99
340_I	344_L	0.731	0.99
350_E	353_H	0.729	0.99
17_T	28_I	0.728	0.99
293_V	296_D	0.727	0.99
380_E	385_V	0.723	0.99
392_E	395_K	0.723	0.99
407_T	411_D	0.722	0.99
391_Y	395_K	0.721	0.99
404_C	414_K	0.720	0.99
381_K	387_P	0.720	0.99
174_C	177_K	0.716	0.99
354_L	361_E	0.716	0.99
223_V	228_K	0.713	0.99
405_V	409_F	0.712	0.99
414_K	417_K	0.712	0.99
406_Y	411_D	0.711	0.99
171_G	175_V	0.709	0.99
28_I	104_L	0.709	0.99
304_T	309_N	0.709	0.99
20_E	25_K	0.709	0.99
119_I	125_L	0.707	0.99
409_F	416_S	0.707	0.99
229_A	233_Y	0.707	0.99
359_E	364_T	0.706	0.99
340_I	347_R	0.705	0.99
49_P	83_F	0.705	0.99
395_K	399_Y	0.703	0.99
374_D	382_I	0.703	0.99
291_I	296_D	0.703	0.99
354_L	358_R	0.702	0.99
341_D	349_S	0.702	0.99
338_P	341_D	0.701	0.99
374_D	385_V	0.699	0.99
394_K	398_L	0.699	0.99
225_S	228_K	0.698	0.99
335_V	339_N	0.698	0.99
351_I	355_M	0.695	0.99
168_A	173_D	0.692	0.99
315_K	320_H	0.692	0.99
203_D	239_E	0.690	0.99
371_V	376_F	0.690	0.99
140_S	143_F	0.689	0.99
234_R	237_R	0.688	0.99
116_K	122_A	0.688	0.99
122_A	125_L	0.687	0.99
362_K	366_V	0.685	0.99
18_E	26_F	0.683	0.99
406_Y	413_E	0.682	0.99
400_Y	403_S	0.681	0.99
247_L	262_M	0.681	0.99
384_T	387_P	0.680	0.99
342_E	346_K	0.680	0.99
12_L	17_T	0.679	0.99
308_L	315_K	0.678	0.99
54_L	58_M	0.677	0.99
260_K	263_P	0.676	0.99
398_L	401_G	0.673	0.99
111_R	276_P	0.670	0.99
15_K	20_E	0.667	0.99
373_V	398_L	0.666	0.99
334_T	341_D	0.665	0.99
373_V	380_E	0.664	0.99
339_N	343_R	0.662	0.99
408_Y	413_E	0.661	0.99
344_L	358_R	0.660	0.99
390_V	394_K	0.660	0.99
356_D	363_V	0.659	0.99
319_K	325_N	0.658	0.99
322_F	326_G	0.658	0.99
21_I	25_K	0.658	0.99
22_N	25_K	0.657	0.99
317_C	322_F	0.656	0.99
377_T	387_P	0.656	0.99
19_R	22_N	0.655	0.99
380_E	384_T	0.654	0.99
339_N	352_S	0.653	0.99
410_T	413_E	0.653	0.99
321_P	324_C	0.652	0.98
378_D	387_P	0.651	0.98
75_D	79_H	0.650	0.98
377_T	383_T	0.649	0.98
320_H	323_G	0.647	0.98
363_V	369_D	0.646	0.98
388_E	393_N	0.646	0.98
406_Y	418_I	0.641	0.98
391_Y	394_K	0.639	0.98
405_V	414_K	0.639	0.98
227_E	231_R	0.637	0.98
320_H	324_C	0.636	0.98
24_R	27_S	0.635	0.98
15_K	21_I	0.633	0.98
399_Y	404_C	0.633	0.98
300_Y	303_V	0.632	0.98
406_Y	416_S	0.631	0.98
413_E	418_I	0.629	0.98
381_K	389_F	0.626	0.98
389_F	393_N	0.623	0.98
222_F	266_F	0.623	0.98
235_K	238_E	0.623	0.98
371_V	382_I	0.622	0.98
33_N	156_V	0.622	0.98
16_E	22_N	0.620	0.98
377_T	389_F	0.619	0.98
16_E	20_E	0.618	0.98
395_K	398_L	0.618	0.98
386_P	389_F	0.615	0.98
39_P	42_Y	0.614	0.98
384_T	389_F	0.613	0.98
361_E	369_D	0.612	0.98
274_S	277_T	0.612	0.98
379_K	388_E	0.611	0.98
118_L	123_D	0.611	0.98
403_S	415_C	0.610	0.98
107_L	113_M	0.606	0.98
392_E	398_L	0.606	0.98
228_K	231_R	0.604	0.98
80_F	84_F	0.600	0.97
343_R	353_H	0.600	0.97
355_M	361_E	0.599	0.97
402_N	405_V	0.598	0.97
319_K	323_G	0.598	0.97
35_I	139_P	0.598	0.97
260_K	281_R	0.597	0.97
378_D	388_E	0.597	0.97
313_N	319_K	0.595	0.97
269_V	272_I	0.595	0.97
317_C	320_H	0.595	0.97
409_F	418_I	0.593	0.97
170_E	175_V	0.592	0.97
373_V	376_F	0.589	0.97
316_V	327_K	0.589	0.97
357_R	361_E	0.589	0.97
335_V	338_P	0.589	0.97
303_V	309_N	0.588	0.97
374_D	381_K	0.588	0.97
376_F	381_K	0.587	0.97
409_F	413_E	0.586	0.97
363_V	368_S	0.585	0.97
413_E	416_S	0.585	0.97
407_T	414_K	0.585	0.97
197_F	203_D	0.585	0.97
306_S	312_S	0.584	0.97
87_L	90_S	0.584	0.97
17_T	26_F	0.583	0.97
376_F	385_V	0.583	0.97
410_T	417_K	0.583	0.97
377_T	390_V	0.582	0.97
363_V	370_F	0.582	0.97
22_N	28_I	0.578	0.97
389_F	395_K	0.573	0.97
396_K	400_Y	0.572	0.97
86_N	90_S	0.571	0.97
378_D	389_F	0.569	0.96
343_R	346_K	0.567	0.96
356_D	359_E	0.567	0.96
340_I	351_I	0.567	0.96
324_C	330_Y	0.566	0.96
77_Q	92_I	0.564	0.96
384_T	388_E	0.562	0.96
404_C	407_T	0.561	0.96
78_L	81_S	0.560	0.96
293_V	297_R	0.559	0.96
354_L	368_S	0.559	0.96
323_G	326_G	0.559	0.96
398_L	413_E	0.558	0.96
55_S	104_L	0.558	0.96
76_T	263_P	0.558	0.96
408_Y	415_C	0.557	0.96
397_I	401_G	0.557	0.96
159_I	162_V	0.554	0.96
338_P	352_S	0.554	0.96
407_T	410_T	0.554	0.96
172_R	177_K	0.552	0.96
322_F	330_Y	0.552	0.96
410_T	416_S	0.551	0.96
167_Q	171_G	0.551	0.96
407_T	416_S	0.549	0.96
13_N	17_T	0.548	0.96
166_G	174_C	0.547	0.96
45_D	76_T	0.546	0.96
376_F	388_E	0.545	0.96
244_V	255_V	0.543	0.95
243_E	253_C	0.543	0.95
404_C	408_Y	0.543	0.95
342_E	350_E	0.538	0.95
342_E	353_H	0.538	0.95
230_L	248_N	0.537	0.95
409_F	417_K	0.536	0.95
176_K	282_S	0.536	0.95
339_N	342_E	0.535	0.95
316_V	323_G	0.534	0.95
320_H	325_N	0.533	0.95
141_V	144_E	0.531	0.95
404_C	417_K	0.531	0.95
373_V	383_T	0.529	0.95
362_K	365_E	0.529	0.95
36_L	133_I	0.528	0.95
336_L	339_N	0.527	0.95
364_T	369_D	0.525	0.95
315_K	318_L	0.525	0.95
363_V	367_F	0.524	0.94
409_F	414_K	0.523	0.94
168_A	174_C	0.523	0.94
392_E	396_K	0.522	0.94
349_S	352_S	0.520	0.94
400_Y	413_E	0.520	0.94
199_I	235_K	0.520	0.94
74_E	78_L	0.519	0.94
377_T	382_I	0.519	0.94
335_V	350_E	0.519	0.94
116_K	123_D	0.518	0.94
378_D	383_T	0.517	0.94
323_G	329_G	0.516	0.94
63_S	103_S	0.514	0.94
404_C	412_G	0.514	0.94
326_G	331_A	0.514	0.94
307_T	314_I	0.512	0.94
313_N	316_V	0.512	0.94
383_T	389_F	0.511	0.94
391_Y	399_Y	0.511	0.94
198_D	205_E	0.511	0.94
405_V	412_G	0.511	0.94
344_L	348_L	0.511	0.94
372_T	385_V	0.510	0.94
356_D	361_E	0.510	0.94
87_L	91_A	0.509	0.94
193_L	201_D	0.508	0.94
291_I	294_W	0.507	0.93
403_S	417_K	0.507	0.93
344_L	352_S	0.506	0.93
319_K	332_N	0.505	0.93
345_I	351_I	0.504	0.93
111_R	114_P	0.504	0.93
399_Y	413_E	0.502	0.93
357_R	363_V	0.500	0.93
112_M	264_T	0.500	0.93
355_M	364_T	0.500	0.93

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4d25A	1	0.6466	100	0.486	Contact Map
3fmpB	1	0.3427	100	0.487	Contact Map
4pxaA	1	0.6552	100	0.488	Contact Map
2db3A	1	0.6444	100	0.492	Contact Map
4nhoA	1	0.653	100	0.5	Contact Map
4w7sA	2	0.6875	100	0.5	Contact Map
4ljyA	1	0.681	100	0.501	Contact Map
3fhtA	1	0.6358	100	0.503	Contact Map
3eiqA	1	0.6099	100	0.503	Contact Map
4c9bA	1	0.6444	100	0.503	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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