GREMLIN Database
Q97YP2 - Oligo/dipeptide transport, permease protein (DppC-2)
UniProt: Q97YP2 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 536 (514)
Sequences: 110 (98)
Seq/√Len: 4.3

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
522_E529_G5.2820.97
349_G404_W2.8600.60
412_R474_G2.8540.60
419_R483_N2.7470.57
451_I527_Y2.7330.57
448_P505_T2.6790.55
6_I10_L2.6250.53
340_I343_V2.5570.51
135_I149_H2.5330.51
345_G356_D2.4660.49
356_D465_E2.4630.48
468_L481_W2.4550.48
474_G522_E2.4520.48
409_R474_G2.4500.48
356_D412_R2.4500.48
349_G471_L2.3860.46
318_E452_A2.2900.43
395_I506_P2.2790.43
309_D521_G2.2770.43
474_G529_G2.2720.43
324_I527_Y2.2450.42
348_A443_L2.2410.42
518_F525_T2.2160.41
510_L517_L2.1540.39
455_I529_G2.1530.39
485_L506_P2.1500.39
452_A477_K2.1380.39
471_L506_P2.1140.38
431_G441_H2.0950.38
307_G312_G2.0920.38
348_A510_L2.0890.37
452_A455_I2.0670.37
525_T529_G2.0660.37
522_E525_T2.0530.36
344_F359_L2.0530.36
352_G521_G2.0450.36
409_R529_G2.0320.36
427_A437_I2.0310.36
322_G412_R2.0070.35
412_R465_E2.0030.35
455_I477_K1.9960.35
455_I522_E1.9960.35
523_A527_Y1.9790.34
521_G524_I1.9770.34
445_H530_S1.9750.34
452_A518_F1.9720.34
300_G304_G1.9670.34
409_R522_E1.9540.34
404_W471_L1.9110.33
474_G525_T1.9110.33
441_H472_G1.8880.32
318_E455_I1.8860.32
465_E474_G1.8700.32
426_A444_R1.8660.31
403_S466_S1.8510.31
472_G530_S1.8400.31
372_L480_T1.8380.31
409_R526_R1.8210.30
370_P431_G1.8190.30
379_I484_M1.8030.30
444_R482_G1.7940.30
331_I372_L1.7930.30
352_G444_R1.7900.29
345_G412_R1.7890.29
346_L527_Y1.7870.29
368_L470_F1.7790.29
507_G517_L1.7750.29
370_P472_G1.7670.29
452_A525_T1.7630.29
455_I518_F1.7610.29
361_S444_R1.7590.29
361_S426_A1.7580.29
314_S444_R1.7580.29
381_I394_L1.7520.29
443_L475_I1.7480.28
345_G465_E1.7420.28
452_A529_G1.7360.28
318_E518_F1.6920.27
424_V437_I1.6850.27
346_L454_L1.6850.27
352_G426_A1.6800.27
418_V423_F1.6800.27
410_T466_S1.6800.27
34_F101_A1.6430.26
187_N355_L1.6430.26
452_A522_E1.6410.26
17_V342_A1.6380.26
468_L482_G1.6330.26
349_G365_F1.6320.26
361_S525_T1.6250.26
450_I485_L1.6200.25
374_I402_L1.6130.25
445_H529_G1.6060.25
396_I410_T1.6010.25
445_H522_E1.6000.25
300_G485_L1.5870.25
400_V475_I1.5780.24
318_E323_G1.5780.24
24_F339_F1.5600.24
471_L482_G1.5590.24
331_I523_A1.5510.24
444_R468_L1.5390.24
363_T528_Y1.5390.24
342_A466_S1.5240.23
313_A506_P1.5140.23
458_I532_V1.5140.23
348_A433_S1.5120.23
47_Q304_G1.5120.23
401_I429_A1.5120.23
465_E521_G1.5110.23
186_F192_N1.5070.23
346_L422_A1.5070.23
28_S320_S1.4980.23
356_D474_G1.4970.23
437_I449_I1.4860.22
262_S423_F1.4850.22
319_Y347_F1.4770.22
315_V520_I1.4740.22
33_F515_V1.4720.22
18_A510_L1.4710.22
24_F34_F1.4610.22
138_E508_I1.4500.22
361_S469_D1.4490.22
337_I403_S1.4480.22
318_E477_K1.4390.21
437_I501_W1.4340.21
455_I525_T1.4280.21
378_L402_L1.4250.21
361_S416_L1.4240.21
455_I475_I1.4240.21
431_G472_G1.4220.21
472_G482_G1.4190.21
56_P394_L1.4150.21
444_R525_T1.4120.21
477_K518_F1.4050.21
396_I458_I1.4040.21
341_G356_D1.3960.21
411_I512_L1.3890.20
426_A468_L1.3880.20
404_W426_A1.3840.20
422_A525_T1.3800.20
322_G349_G1.3790.20
325_F359_L1.3750.20
345_G370_P1.3750.20
422_A452_A1.3680.20
368_L519_Y1.3630.20
416_L468_L1.3610.20
332_L390_P1.3550.20
493_L531_L1.3540.20
377_V513_L1.3520.20
480_T527_Y1.3500.20
324_I470_F1.3450.20
441_H524_I1.3430.20
361_S364_D1.3340.19
465_E472_G1.3330.19
322_G341_G1.3240.19
456_F459_P1.3220.19
191_I194_S1.3180.19
349_G527_Y1.3160.19
422_A532_V1.3140.19
442_V485_L1.3140.19
71_K77_D1.3050.19
409_R412_R1.3030.19
175_I512_L1.2960.19
424_V442_V1.2940.19
373_A420_N1.2940.19
325_F380_T1.2930.19
519_Y523_A1.2860.19
444_R469_D1.2820.18
518_F527_Y1.2820.18
327_L349_G1.2670.18
314_S482_G1.2630.18
437_I488_S1.2620.18
348_A475_I1.2530.18
413_G452_A1.2500.18
378_L416_L1.2480.18
134_E186_F1.2460.18
340_I481_W1.2410.18
426_A482_G1.2380.18
375_L403_S1.2330.18
311_N413_G1.2290.18
424_V450_I1.2270.17
330_A530_S1.2210.17
352_G361_S1.2190.17
419_R432_M1.2140.17
396_I464_I1.2140.17
100_D104_I1.2130.17
360_T416_L1.2120.17
9_I467_A1.2080.17
452_A483_N1.2050.17
352_G468_L1.2050.17
326_D524_I1.2010.17
396_I483_N1.1950.17
434_N442_V1.1940.17
323_G414_Q1.1900.17
370_P441_H1.1880.17
359_L520_I1.1880.17
370_P530_S1.1870.17
23_I347_F1.1850.17
477_K529_G1.1830.17
416_L427_A1.1790.17
118_F126_G1.1770.17
319_Y466_S1.1750.17
356_D521_G1.1740.17
356_D370_P1.1720.17
361_S404_W1.1690.17
312_G414_Q1.1680.16
317_A340_I1.1590.16
68_P82_K1.1570.16
437_I481_W1.1560.16
412_R522_E1.1530.16
324_I409_R1.1520.16
433_S505_T1.1510.16
20_I440_K1.1440.16
326_D474_G1.1430.16
392_D505_T1.1400.16
28_S423_F1.1360.16
451_I480_T1.1350.16
452_A469_D1.1350.16
350_Y482_G1.1350.16
312_G404_W1.1330.16
361_S521_G1.1310.16
430_L467_A1.1300.16
451_I525_T1.1280.16
395_I479_P1.1270.16
477_K522_E1.1250.16
441_H530_S1.1240.16
422_A461_V1.1220.16
188_G341_G1.1180.16
314_S361_S1.1180.16
324_I525_T1.1110.16
437_I442_V1.1040.15
356_D361_S1.1040.15
443_L519_Y1.1030.15
322_G404_W1.1020.15
307_G441_H1.1020.15
15_L531_L1.1010.15
452_A463_G1.0980.15
22_F294_L1.0960.15
177_A369_L1.0920.15
321_Q513_L1.0900.15
324_I526_R1.0860.15
437_I485_L1.0820.15
15_L522_E1.0790.15
447_F510_L1.0780.15
334_G529_G1.0730.15
360_T413_G1.0710.15
324_I474_G1.0710.15
21_I27_G1.0640.15
416_L481_W1.0640.15
349_G482_G1.0630.15
35_T480_T1.0560.15
366_I396_I1.0480.15
450_I456_F1.0450.15
353_G404_W1.0450.15
414_Q475_I1.0410.14
518_F526_R1.0390.14
341_G345_G1.0390.14
361_S365_F1.0380.14
396_I503_I1.0370.14
21_I59_A1.0340.14
373_A503_I1.0320.14
422_A518_F1.0310.14
423_F493_L1.0280.14
15_L529_G1.0250.14
416_L419_R1.0250.14
220_Y512_L1.0240.14
346_L470_F1.0240.14
351_Y489_I1.0220.14
324_I421_M1.0210.14
450_I459_P1.0150.14
316_F351_Y1.0150.14
335_L355_L1.0090.14
429_A522_E1.0070.14
318_E522_E1.0060.14
350_Y426_A1.0060.14
323_G419_R1.0040.14
400_V483_N1.0020.14
237_G362_F1.0010.14
8_P12_L1.0000.14
190_V228_Y0.9980.14
359_L409_R0.9970.14
446_V531_L0.9970.14
349_G525_T0.9960.14
522_E526_R0.9950.14
444_R530_S0.9940.14
352_G482_G0.9940.14
455_I483_N0.9930.14
345_G472_G0.9920.14
115_E128_T0.9910.14
309_D524_I0.9840.14
318_E529_G0.9830.14
337_I449_I0.9830.14
344_F358_I0.9830.14
312_G353_G0.9820.14
378_L429_A0.9800.14
73_P144_N0.9780.14
324_I346_L0.9770.14
345_G521_G0.9690.13
428_K437_I0.9670.13
32_G503_I0.9660.13
422_A458_I0.9640.13
398_V406_P0.9610.13
209_T212_V0.9590.13
149_H249_P0.9580.13
323_G396_I0.9570.13
364_D507_G0.9570.13
9_I13_K0.9530.13
304_G364_D0.9530.13
367_L418_V0.9520.13
463_G529_G0.9520.13
307_G431_G0.9480.13
444_R471_L0.9480.13
521_G525_T0.9460.13
55_V58_W0.9440.13
438_I527_Y0.9430.13
422_A477_K0.9430.13
477_K525_T0.9420.13
444_R470_F0.9380.13
345_G431_G0.9370.13
179_A189_Y0.9360.13
326_D412_R0.9360.13
15_L523_A0.9350.13
361_S527_Y0.9340.13
104_I508_I0.9340.13
474_G527_Y0.9310.13
444_R473_I0.9310.13
529_G533_G0.9290.13
426_A521_G0.9240.13
84_A87_I0.9240.13
462_I473_I0.9230.13
413_G468_L0.9220.13
361_S406_P0.9210.13
26_L531_L0.9190.13
315_V369_L0.9140.13
300_G501_W0.9120.13
518_F522_E0.9100.13
304_G523_A0.9100.13
352_G526_R0.9100.13
475_I518_F0.9090.13
415_V524_I0.9080.13
312_G408_S0.9080.13
360_T452_A0.9060.13
396_I400_V0.9050.13
8_P528_Y0.9040.13
455_I521_G0.9030.13
12_L347_F0.9020.13
360_T469_D0.9020.13
74_N362_F0.8980.12
409_R525_T0.8970.12
313_A488_S0.8930.12
393_I405_P0.8920.12
419_R520_I0.8900.12
308_T358_I0.8890.12
15_L424_V0.8880.12
340_I344_F0.8860.12
304_G473_I0.8830.12
470_F527_Y0.8780.12
400_V503_I0.8780.12
84_A433_S0.8780.12
336_A347_F0.8770.12
308_T421_M0.8750.12
314_S404_W0.8750.12
309_D356_D0.8750.12
260_L473_I0.8740.12
361_S414_Q0.8700.12
309_D414_Q0.8680.12
322_G361_S0.8660.12
392_D439_R0.8640.12
404_W408_S0.8620.12
346_L421_M0.8610.12
329_L440_K0.8610.12
349_G415_V0.8600.12
165_D206_Y0.8590.12
353_G482_G0.8570.12
336_A443_L0.8560.12
468_L471_L0.8560.12
407_T485_L0.8540.12
407_T438_I0.8510.12
451_I523_A0.8500.12
8_P533_G0.8490.12
373_A513_L0.8480.12
340_I427_A0.8480.12
348_A356_D0.8480.12
5_R8_P0.8480.12
407_T480_T0.8470.12
410_T475_I0.8460.12
428_K432_M0.8450.12
432_M529_G0.8430.12
345_G474_G0.8420.12
407_T512_L0.8390.12
13_K195_N0.8380.12
352_G525_T0.8350.12
429_A529_G0.8330.12
174_S211_L0.8310.12
404_W468_L0.8300.12
370_P482_G0.8290.12
186_F193_P0.8280.12
149_H155_Y0.8280.12
303_Y459_P0.8270.12
346_L438_I0.8270.12
463_G469_D0.8260.12
276_I512_L0.8260.12
323_G477_K0.8240.12
324_I528_Y0.8240.12
201_F229_I0.8230.12
22_F430_L0.8230.12
415_V452_A0.8210.11
348_A398_V0.8190.11
201_F267_T0.8180.11
443_L490_N0.8170.11
346_L514_G0.8160.11
377_V392_D0.8160.11
417_Q452_A0.8140.11
218_F222_G0.8110.11
370_P412_R0.8110.11
319_Y505_T0.8090.11
215_S218_F0.8080.11
4_M37_P0.8080.11
474_G526_R0.8030.11
424_V532_V0.8020.11
330_A370_P0.8000.11
144_N148_Y0.7980.11
319_Y341_G0.7970.11
306_L509_A0.7960.11
441_H469_D0.7930.11
322_G359_L0.7930.11
322_G471_L0.7920.11
315_V325_F0.7900.11
356_D472_G0.7890.11
58_W62_F0.7890.11
422_A439_R0.7870.11
416_L452_A0.7860.11
54_A62_F0.7860.11
325_F375_L0.7830.11
187_N347_F0.7830.11
349_G426_A0.7820.11
106_Y111_G0.7800.11
322_G474_G0.7790.11
159_R204_G0.7790.11
171_I397_I0.7780.11
444_R472_G0.7780.11
52_P60_S0.7780.11
105_I119_Q0.7770.11
304_G507_G0.7770.11
483_N522_E0.7760.11
383_Q424_V0.7750.11
404_W482_G0.7720.11
365_F525_T0.7720.11
54_A59_A0.7670.11
364_D368_L0.7660.11
334_G522_E0.7640.11
452_A474_G0.7640.11
507_G515_V0.7640.11
456_F532_V0.7640.11
477_K503_I0.7630.11
466_S480_T0.7620.11
189_Y193_P0.7620.11
482_G506_P0.7610.11
102_V229_I0.7600.11
431_G530_S0.7570.11
5_R11_R0.7560.11
57_S276_I0.7540.11
211_L222_G0.7540.11
408_S417_Q0.7540.11
364_D424_V0.7530.11
424_V440_K0.7520.11
57_S60_S0.7520.11
328_E487_F0.7500.11
361_S465_E0.7490.11
456_F518_F0.7480.11
405_P423_F0.7460.11
171_I381_I0.7450.11
416_L446_V0.7440.11
347_F355_L0.7430.11
318_E413_G0.7410.11
526_R529_G0.7410.11
333_A437_I0.7410.11
312_G482_G0.7410.11
415_V457_D0.7380.11
460_A464_I0.7360.10
476_L513_L0.7340.10
183_Y362_F0.7340.10
455_I503_I0.7320.10
351_Y381_I0.7310.10
353_G426_A0.7290.10
322_G420_N0.7290.10
322_G426_A0.7280.10
468_L473_I0.7270.10
372_L485_L0.7270.10
363_T395_I0.7270.10
415_V424_V0.7240.10
178_Y369_L0.7230.10
395_I528_Y0.7230.10
412_R529_G0.7230.10
7_P30_A0.7230.10
445_H524_I0.7220.10
186_F212_V0.7220.10
374_I480_T0.7210.10
38_K528_Y0.7170.10
108_S113_K0.7160.10
409_R528_Y0.7140.10
391_K503_I0.7090.10
130_N133_V0.7090.10
341_G465_E0.7080.10
356_D431_G0.7080.10
29_I39_A0.7080.10
415_V423_F0.7080.10
119_Q126_G0.7060.10
369_L436_E0.7060.10
421_M531_L0.7060.10
359_L427_A0.7050.10
170_I268_G0.7050.10
424_V506_P0.7040.10
524_I530_S0.7030.10
310_N440_K0.7020.10
9_I524_I0.7000.10
323_G452_A0.6980.10
374_I515_V0.6960.10
312_G426_A0.6950.10
376_I413_G0.6940.10
30_A189_Y0.6930.10
453_Q492_S0.6930.10
409_R452_A0.6910.10
391_K419_R0.6900.10
107_N128_T0.6900.10
144_N342_A0.6890.10
10_L13_K0.6880.10
404_W412_R0.6870.10
147_L175_I0.6860.10
459_P462_I0.6860.10
359_L402_L0.6860.10
227_N512_L0.6850.10
28_S467_A0.6850.10
482_G530_S0.6840.10
216_T222_G0.6820.10
195_N211_L0.6820.10
154_N466_S0.6800.10
507_G510_L0.6780.10
368_L522_E0.6780.10
4_M8_P0.6760.10
349_G526_R0.6730.10
189_Y192_N0.6730.10
452_A475_I0.6730.10
445_H472_G0.6730.10
355_L512_L0.6720.10
322_G526_R0.6710.10
488_S531_L0.6690.10
412_R429_A0.6690.10
16_W470_F0.6670.10
358_I531_L0.6670.10
396_I455_I0.6660.10
443_L493_L0.6640.10
21_I213_T0.6640.10
441_H482_G0.6640.10
37_P513_L0.6620.10
323_G391_K0.6610.10
326_D452_A0.6600.10
376_I509_A0.6600.10
349_G412_R0.6600.10
341_G412_R0.6590.10
373_A391_K0.6580.10
359_L415_V0.6570.10
322_G525_T0.6540.10
364_D525_T0.6520.10
325_F478_F0.6510.10
314_S530_S0.6510.10
35_T372_L0.6500.10
9_I330_A0.6500.10
12_L414_Q0.6490.10
370_P465_E0.6480.10
39_A423_F0.6480.10
445_H474_G0.6470.10
472_G521_G0.6460.10
315_V401_I0.6440.09
323_G475_I0.6440.09
361_S468_L0.6440.09
314_S352_G0.6440.09
427_A481_W0.6440.09
307_G469_D0.6430.09
466_S519_Y0.6420.09
368_L437_I0.6420.09
411_I452_A0.6410.09
382_F506_P0.6410.09
175_I188_G0.6400.09
350_Y410_T0.6380.09
163_F175_I0.6370.09
90_W512_L0.6360.09
308_T330_A0.6350.09
366_I394_L0.6340.09
462_I513_L0.6310.09
424_V488_S0.6300.09
475_I483_N0.6290.09
109_S263_M0.6290.09
414_Q426_A0.6280.09
331_I494_D0.6270.09
15_L376_I0.6270.09
365_F412_R0.6240.09
325_F392_D0.6240.09
327_L515_V0.6230.09
373_A446_V0.6210.09
47_Q59_A0.6200.09
396_I419_R0.6200.09
360_T477_K0.6200.09
522_E531_L0.6190.09
305_V341_G0.6190.09
437_I506_P0.6190.09
322_G409_R0.6170.09
373_A416_L0.6160.09
307_G369_L0.6160.09
434_N514_G0.6150.09
368_L529_G0.6150.09
414_Q449_I0.6140.09
410_T464_I0.6140.09
396_I475_I0.6130.09
483_N529_G0.6120.09
361_S412_R0.6110.09
221_L339_F0.6110.09
418_V449_I0.6100.09
399_L427_A0.6070.09
353_G370_P0.6060.09
318_E360_T0.6050.09
165_D177_A0.6050.09
21_I41_P0.6050.09
459_P502_W0.6040.09
188_G192_N0.6010.09
337_I511_F0.6000.09
201_F508_I0.6000.09
86_V102_V0.5990.09
173_A177_A0.5980.09
436_E471_L0.5980.09
19_L70_I0.5980.09
448_P468_L0.5970.09
444_R526_R0.5970.09
459_P517_L0.5970.09
402_L510_L0.5960.09
451_I474_G0.5950.09
416_L469_D0.5940.09
465_E530_S0.5930.09
104_I222_G0.5900.09
333_A512_L0.5890.09
21_I56_P0.5890.09
361_S466_S0.5890.09
36_A362_F0.5880.09
315_V490_N0.5880.09
465_E469_D0.5870.09
439_R469_D0.5870.09
458_I462_I0.5860.09
463_G477_K0.5860.09
22_F399_L0.5840.09
469_D518_F0.5830.09
322_G444_R0.5820.09
155_Y275_T0.5820.09
214_L335_L0.5810.09
404_W525_T0.5810.09
364_D533_G0.5810.09
24_F98_N0.5800.09
416_L483_N0.5800.09
327_L404_W0.5800.09
13_K16_W0.5790.09
406_P416_L0.5790.09
206_Y280_P0.5770.09
334_G531_L0.5770.09
419_R502_W0.5760.09
366_I391_K0.5760.09
350_Y444_R0.5750.09
420_N469_D0.5740.09
32_G393_I0.5730.09
409_R481_W0.5700.09
449_I532_V0.5700.09
209_T221_L0.5700.09
29_I32_G0.5670.09
390_P508_I0.5640.09
15_L26_L0.5620.09
419_R529_G0.5610.09
309_D518_F0.5610.09
373_A452_A0.5600.09
412_R521_G0.5600.09
420_N513_L0.5590.09
121_T164_G0.5580.09
456_F470_F0.5570.09
234_A335_L0.5560.09
55_V62_F0.5560.09
194_S201_F0.5560.09
369_L408_S0.5550.09
175_I191_I0.5550.09
361_S507_G0.5530.09
341_G370_P0.5530.09
361_S518_F0.5510.09
4_M22_F0.5510.09
450_I470_F0.5500.09
449_I459_P0.5480.09
33_F511_F0.5450.09
291_L316_F0.5450.09
452_A532_V0.5440.09
5_R476_L0.5440.09
405_P527_Y0.5420.08
314_S426_A0.5420.08
190_V201_F0.5420.08
323_G423_F0.5420.08
85_S217_V0.5420.08
102_V110_Y0.5420.08
361_S482_G0.5410.08
322_G364_D0.5410.08
349_G361_S0.5410.08
479_P501_W0.5390.08
412_R525_T0.5390.08
337_I532_V0.5390.08
449_I501_W0.5380.08
396_I485_L0.5370.08
365_F404_W0.5370.08
476_L488_S0.5360.08
373_A379_I0.5360.08
506_P516_S0.5360.08
403_S406_P0.5350.08
414_Q518_F0.5350.08
432_M503_I0.5340.08
39_A304_G0.5340.08
441_H465_E0.5330.08
190_V221_L0.5330.08
321_Q364_D0.5330.08
404_W526_R0.5320.08
382_F395_I0.5310.08
200_L207_L0.5310.08
503_I518_F0.5290.08
188_G191_I0.5290.08
294_L519_Y0.5290.08
488_S506_P0.5280.08
86_V137_I0.5280.08
426_A471_L0.5270.08
309_D345_G0.5250.08
312_G361_S0.5240.08
349_G370_P0.5230.08
208_P237_G0.5220.08
377_V439_R0.5210.08
195_N201_F0.5210.08
313_A424_V0.5200.08
313_A469_D0.5170.08
11_R440_K0.5160.08
427_A501_W0.5160.08
329_L436_E0.5150.08
396_I502_W0.5150.08
430_L450_I0.5150.08
422_A456_F0.5140.08
138_E239_T0.5130.08
474_G524_I0.5120.08
24_F358_I0.5110.08
437_I472_G0.5110.08
41_P50_A0.5110.08
94_N245_S0.5110.08
419_R425_E0.5110.08
125_Y203_A0.5100.08
412_R471_L0.5090.08
72_V77_D0.5080.08
425_E432_M0.5080.08
420_N463_G0.5080.08
358_I512_L0.5070.08
4_M11_R0.5070.08
309_D312_G0.5060.08
174_S224_G0.5060.08
446_V503_I0.5050.08
474_G483_N0.5040.08
452_A524_I0.5040.08
216_T256_S0.5040.08
473_I505_T0.5030.08
332_L527_Y0.5030.08
442_V450_I0.5030.08
307_G370_P0.5010.08
364_D382_F0.5010.08
24_F220_Y0.5010.08
360_T406_P0.5000.08
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
3tuiA 2 0.3899 99.9 0.836 Contact Map
4tquM 1 0.4776 99.9 0.848 Contact Map
4ymuD 2 0.3974 99.9 0.853 Contact Map
3d31C 2 0.4384 99.8 0.869 Contact Map
3rlfF 1 0.75 99.8 0.87 Contact Map
3rlfG 1 0.4869 99.8 0.871 Contact Map
2onkC 2 0.444 99.8 0.872 Contact Map
4tquN 1 0.4963 99.7 0.883 Contact Map
4x33B 1 0.5317 70.4 0.973 Contact Map
4o2wA 3 0.528 38.6 0.978 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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