Q97Y76 - SULSO - GREMLIN Contacts

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Q97Y76 - Amino acid transporter

UniProt:	Q97Y76	Sequences: MSEKKLLTFWQALFIGLGNIIGAGIFVMAGSTISVAGPGAIIAFIFTAIFAMSIGLNSAELSSIFTDVEGGVYSFTLKTLGEMSGFLVGWFRVISYVIGGAATALGFSGYLLLFGLPKTLYYTLAVILIVILLVLDYFGIGTVAEVDTIFVIINISSLILFSLTIPIIVGIKVHNFVPLFPHGIQGVLTTSNLAFFSYSGFNTIVTLTPSTKNGEKVIPRAIVMSLIITSIIYISVIFSMVDAMPWYYYGQTSAPLSLALSQIHAPTWLFLITSISAILATISVTLSIIVASERTLRQLSRDFQLPVKHELLVVGGIMLASLLLGNVEAIALASNFGIIFSYMLTGLEVIIVRRKGLRGSFRSPAFPVIQVFAIILSALFMISLGLNSLEIGVVTLFIGILVYETLREVKAHENRKK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	417 (400)
Sequences:	24161 (15700)
Seq/√Len:	785.0

ECOLI - POTE PUUP PLAP PROY FRLA AROP YIFK ANSP MMUP PHEP CADB GABP LYSP ADIC YBAT CYCA ARCD YCAM YJEH YGJI GADC YJEM TNAB TYRP MTR
BACSU - ASPP YHDG YBEC ROCC YBXG YCGH GABP YTNA YVBW HUTM YFNA YBGF ARCD AAPA YDGF STET ROCE YECA YDAO YNDE GERKB GERBB GERAB YFKT
HALSA - Q9HHU7 Q9HQB3 Q9HSL5
SULSO - Q97Y76 Q97U05 Q97XM0 Q97X49 Q97Z63 Q97WS3 Q7LXI7 Q97ZB5 Q97U33 Q97VR4 Q97WD4 Q97YN3 Q97VA6 Q97VA8 Q97YX9 Q97U39

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
133_L	316_G	4.612	1.00
351_I	355_K	3.470	1.00
48_A	230_S	3.407	1.00
216_K	220_R	3.165	1.00
343_M	374_I	3.041	1.00
8_T	212_K	2.945	1.00
211_T	217_V	2.872	1.00
73_Y	302_D	2.863	1.00
89_G	299_L	2.749	1.00
213_N	216_K	2.684	1.00
165_I	239_S	2.673	1.00
163_L	167_I	2.538	1.00
13_L	224_M	2.524	1.00
209_P	301_R	2.515	1.00
268_W	272_I	2.500	1.00
60_E	353_R	2.481	1.00
210_S	294_R	2.477	1.00
9_F	224_M	2.467	1.00
77_L	85_G	2.319	1.00
258_L	261_S	2.313	1.00
134_V	138_F	2.295	1.00
297_R	301_R	2.287	1.00
371_V	375_I	2.221	1.00
9_F	217_V	2.213	1.00
313_V	317_I	2.191	1.00
137_Y	309_H	2.181	1.00
12_A	211_T	2.154	1.00
9_F	13_L	2.146	1.00
126_V	323_L	2.128	1.00
346_G	373_A	2.113	1.00
220_R	224_M	2.092	1.00
248_Y	262_Q	2.092	1.00
141_G	145_E	2.091	1.00
133_L	312_L	2.054	1.00
80_L	351_I	2.053	1.00
57_N	346_G	2.040	1.00
8_T	11_Q	2.024	1.00
152_I	156_S	2.017	1.00
93_V	315_G	2.005	1.00
401_L	405_T	1.993	1.00
77_L	82_E	1.980	1.00
49_I	53_S	1.970	1.00
368_V	372_F	1.943	1.00
32_T	40_A	1.898	1.00
76_T	88_V	1.897	1.00
80_L	347_L	1.878	1.00
11_Q	148_T	1.873	1.00
172_K	175_N	1.861	1.00
393_V	397_F	1.858	1.00
245_P	248_Y	1.854	1.00
213_N	217_V	1.821	1.00
385_G	388_S	1.815	1.00
223_V	227_I	1.810	1.00
258_L	262_Q	1.802	1.00
117_P	120_L	1.797	1.00
136_D	286_L	1.772	1.00
130_V	316_G	1.755	1.00
172_K	176_F	1.753	1.00
375_I	379_L	1.748	1.00
88_V	344_L	1.743	1.00
13_L	228_I	1.738	1.00
43_A	190_T	1.736	1.00
156_S	160_L	1.730	1.00
39_G	187_V	1.711	1.00
7_L	11_Q	1.691	1.00
104_A	285_T	1.689	1.00
111_L	124_L	1.687	1.00
81_G	84_S	1.684	1.00
16_G	225_S	1.681	1.00
137_Y	313_V	1.674	1.00
207_L	290_V	1.641	1.00
252_T	258_L	1.629	1.00
90_W	399_G	1.617	1.00
227_I	231_I	1.600	1.00
310_E	314_V	1.581	1.00
126_V	320_A	1.578	1.00
55_G	226_L	1.556	1.00
155_I	159_I	1.536	1.00
351_I	354_R	1.535	1.00
49_I	372_F	1.528	1.00
252_T	255_P	1.527	1.00
366_F	370_Q	1.520	1.00
261_S	270_F	1.516	1.00
356_G	359_G	1.511	1.00
104_A	129_I	1.509	1.00
166_P	239_S	1.508	1.00
296_L	311_L	1.503	1.00
175_N	178_P	1.500	1.00
395_T	399_G	1.499	1.00
50_F	376_L	1.498	1.00
80_L	84_S	1.498	1.00
174_H	177_V	1.493	1.00
76_T	344_L	1.487	1.00
120_L	123_T	1.480	1.00
53_S	372_F	1.476	1.00
157_S	276_S	1.472	1.00
126_V	130_V	1.465	1.00
214_G	219_P	1.465	1.00
213_N	220_R	1.459	1.00
292_S	315_G	1.458	1.00
394_V	398_I	1.456	1.00
107_F	128_L	1.453	1.00
347_L	374_I	1.450	1.00
47_T	194_A	1.443	1.00
129_I	316_G	1.443	1.00
347_L	351_I	1.441	1.00
11_Q	144_A	1.436	1.00
107_F	278_I	1.431	1.00
133_L	313_V	1.428	1.00
69_E	209_P	1.415	1.00
54_I	346_G	1.369	1.00
64_I	359_G	1.367	1.00
271_L	275_I	1.360	1.00
378_A	382_I	1.359	1.00
65_F	78_K	1.358	1.00
293_E	312_L	1.357	1.00
264_H	269_L	1.352	1.00
55_G	222_I	1.346	1.00
217_V	220_R	1.345	1.00
400_I	404_E	1.339	1.00
132_L	285_T	1.338	1.00
137_Y	307_V	1.333	1.00
231_I	235_S	1.332	1.00
162_S	235_S	1.328	1.00
68_V	74_S	1.317	1.00
56_L	223_V	1.314	1.00
171_I	175_N	1.311	1.00
318_M	322_L	1.310	1.00
20_I	229_T	1.298	1.00
9_F	220_R	1.293	1.00
129_I	319_L	1.289	1.00
41_I	238_F	1.287	1.00
261_S	267_T	1.284	1.00
74_S	78_K	1.283	1.00
122_Y	126_V	1.280	1.00
7_L	12_A	1.278	1.00
125_A	323_L	1.277	1.00
27_V	106_G	1.267	1.00
310_E	313_V	1.265	1.00
377_S	380_F	1.255	1.00
394_V	397_F	1.250	1.00
296_L	305_L	1.249	1.00
246_W	249_Y	1.245	1.00
7_L	144_A	1.244	1.00
103_T	284_V	1.237	1.00
79_T	348_E	1.236	1.00
391_I	394_V	1.233	1.00
68_V	78_K	1.233	1.00
39_G	180_F	1.231	1.00
386_L	389_L	1.229	1.00
212_K	217_V	1.228	1.00
161_F	165_I	1.217	1.00
165_I	243_A	1.216	1.00
171_I	174_H	1.211	1.00
135_L	146_V	1.210	1.00
57_N	370_Q	1.209	1.00
365_A	369_I	1.208	1.00
368_V	371_V	1.205	1.00
6_L	212_K	1.204	1.00
166_P	170_G	1.202	1.00
160_L	164_T	1.198	1.00
58_S	72_V	1.188	1.00
83_M	406_L	1.183	1.00
76_T	84_S	1.182	1.00
379_L	383_S	1.180	1.00
119_T	123_T	1.177	1.00
62_S	75_F	1.170	1.00
16_G	204_I	1.166	1.00
17_L	228_I	1.151	1.00
86_F	90_W	1.147	1.00
12_A	221_A	1.143	1.00
15_I	207_L	1.142	1.00
350_I	371_V	1.136	1.00
10_W	14_F	1.127	1.00
130_V	320_A	1.127	1.00
389_L	393_V	1.123	1.00
146_V	150_F	1.121	1.00
365_A	368_V	1.119	1.00
60_E	63_S	1.116	1.00
127_I	131_I	1.115	1.00
367_P	371_V	1.113	1.00
357_L	360_S	1.101	1.00
390_E	394_V	1.097	1.00
386_L	390_E	1.087	1.00
64_I	357_L	1.087	1.00
73_Y	298_Q	1.083	1.00
147_D	286_L	1.082	1.00
123_T	127_I	1.080	1.00
373_A	377_S	1.065	1.00
379_L	382_I	1.061	1.00
183_G	186_G	1.060	1.00
111_L	278_I	1.058	1.00
100_G	319_L	1.058	1.00
93_V	296_L	1.057	1.00
145_E	149_I	1.056	1.00
172_K	178_P	1.054	1.00
392_G	396_L	1.046	1.00
133_L	137_Y	1.045	1.00
161_F	260_L	1.043	1.00
343_M	378_A	1.041	1.00
108_S	124_L	1.039	1.00
159_I	163_L	1.037	1.00
17_L	229_T	1.036	1.00
130_V	134_V	1.033	1.00
140_I	290_V	1.029	1.00
374_I	378_A	1.029	1.00
250_G	255_P	1.025	1.00
397_F	401_L	1.022	1.00
389_L	392_G	1.022	1.00
402_V	405_T	1.022	1.00
70_G	73_Y	1.003	1.00
150_F	283_S	0.997	1.00
83_M	400_I	0.995	1.00
243_A	259_A	0.992	1.00
370_Q	374_I	0.991	1.00
174_H	178_P	0.986	1.00
343_M	347_L	0.985	1.00
162_S	239_S	0.984	1.00
83_M	87_L	0.981	1.00
33_I	40_A	0.980	1.00
336_F	392_G	0.979	1.00
208_T	218_I	0.978	1.00
41_I	241_V	0.978	1.00
402_V	406_L	0.978	1.00
202_N	206_T	0.974	1.00
45_I	234_I	0.969	1.00
108_S	125_A	0.967	1.00
370_Q	377_S	0.966	1.00
48_A	198_Y	0.966	1.00
180_F	187_V	0.964	1.00
238_F	242_D	0.960	1.00
267_T	271_L	0.957	1.00
132_L	286_L	0.957	1.00
230_S	234_I	0.957	1.00
131_I	282_I	0.954	1.00
173_V	177_V	0.951	1.00
224_M	228_I	0.944	1.00
349_V	370_Q	0.937	1.00
377_S	381_M	0.934	1.00
188_L	379_L	0.931	1.00
199_S	338_I	0.930	1.00
245_P	262_Q	0.929	1.00
309_H	313_V	0.921	1.00
354_R	367_P	0.911	1.00
390_E	393_V	0.909	1.00
77_L	302_D	0.908	1.00
162_S	166_P	0.908	1.00
70_G	74_S	0.906	1.00
124_L	127_I	0.904	1.00
116_L	120_L	0.903	1.00
381_M	384_L	0.901	1.00
102_A	331_A	0.900	1.00
134_V	137_Y	0.895	1.00
388_S	391_I	0.894	1.00
294_R	297_R	0.893	1.00
11_Q	145_E	0.893	1.00
155_I	232_I	0.892	1.00
102_A	196_F	0.891	1.00
399_G	402_V	0.890	1.00
63_S	360_S	0.883	1.00
84_S	344_L	0.876	1.00
154_N	280_A	0.875	1.00
385_G	389_L	0.874	1.00
6_L	141_G	0.873	1.00
289_I	316_G	0.871	1.00
169_V	242_D	0.869	1.00
254_A	258_L	0.868	1.00
184_I	188_L	0.865	1.00
21_I	24_G	0.863	1.00
9_F	221_A	0.863	1.00
14_F	148_T	0.855	1.00
61_L	349_V	0.847	1.00
361_F	364_P	0.846	1.00
42_I	187_V	0.841	1.00
184_I	187_V	0.839	1.00
308_K	311_L	0.838	1.00
398_I	402_V	0.838	1.00
203_T	291_A	0.837	1.00
64_I	360_S	0.835	1.00
333_A	337_G	0.835	1.00
92_R	96_Y	0.834	1.00
107_F	282_I	0.834	1.00
189_T	193_L	0.833	1.00
343_M	377_S	0.831	1.00
387_N	391_I	0.825	1.00
171_I	176_F	0.825	1.00
90_W	305_L	0.824	1.00
108_S	121_Y	0.824	1.00
10_W	148_T	0.822	1.00
13_L	221_A	0.817	1.00
366_F	369_I	0.813	1.00
199_S	342_Y	0.812	1.00
132_L	289_I	0.811	1.00
52_M	56_L	0.808	1.00
52_M	223_V	0.807	1.00
388_S	392_G	0.804	1.00
145_E	148_T	0.799	1.00
64_I	67_D	0.790	1.00
138_F	142_T	0.789	1.00
76_T	348_E	0.788	1.00
53_S	57_N	0.785	1.00
173_V	178_P	0.784	1.00
317_I	321_S	0.783	1.00
394_V	401_L	0.781	1.00
81_G	407_R	0.778	1.00
162_S	236_V	0.771	1.00
98_I	333_A	0.770	1.00
25_I	236_V	0.768	1.00
365_A	370_Q	0.765	1.00
167_I	170_G	0.764	1.00
61_L	75_F	0.758	1.00
136_D	290_V	0.757	1.00
42_I	45_I	0.755	1.00
32_T	36_A	0.755	1.00
21_I	154_N	0.754	1.00
45_I	49_I	0.753	1.00
316_G	320_A	0.753	1.00
358_R	362_R	0.752	1.00
350_I	354_R	0.751	1.00
268_W	271_L	0.751	1.00
348_E	352_V	0.750	1.00
73_Y	77_L	0.749	1.00
318_M	321_S	0.749	1.00
19_N	287_S	0.748	1.00
107_F	281_T	0.746	1.00
20_I	225_S	0.744	1.00
69_E	297_R	0.740	1.00
213_N	219_P	0.739	1.00
166_P	235_S	0.739	1.00
260_L	264_H	0.738	1.00
346_G	374_I	0.737	1.00
132_L	282_I	0.737	1.00
374_I	377_S	0.735	1.00
296_L	314_V	0.732	1.00
81_G	85_G	0.732	1.00
122_Y	125_A	0.730	1.00
255_P	260_L	0.728	1.00
390_E	395_T	0.726	1.00
38_P	241_V	0.724	1.00
337_G	341_S	0.724	1.00
209_P	297_R	0.723	1.00
39_G	179_L	0.722	1.00
219_P	222_I	0.721	1.00
110_Y	277_A	0.721	1.00
370_Q	373_A	0.721	1.00
10_W	145_E	0.721	1.00
42_I	46_F	0.720	1.00
79_T	351_I	0.719	1.00
373_A	376_L	0.719	1.00
144_A	148_T	0.719	1.00
387_N	392_G	0.718	1.00
395_T	398_I	0.716	1.00
322_L	325_G	0.716	1.00
319_L	322_L	0.713	1.00
40_A	237_I	0.713	1.00
18_G	151_V	0.711	1.00
375_I	382_I	0.711	1.00
228_I	232_I	0.709	1.00
350_I	367_P	0.708	1.00
112_L	115_G	0.707	1.00
401_L	404_E	0.705	1.00
164_T	264_H	0.705	1.00
111_L	114_F	0.704	1.00
105_L	330_I	0.702	1.00
99_G	334_S	0.701	1.00
6_L	140_I	0.700	1.00
387_N	390_E	0.699	1.00
326_N	329_A	0.698	1.00
13_L	16_G	0.697	1.00
398_I	401_L	0.697	1.00
399_G	403_Y	0.696	1.00
173_V	176_F	0.693	1.00
54_I	377_S	0.691	1.00
289_I	293_E	0.690	1.00
51_A	201_F	0.689	1.00
357_L	362_R	0.689	1.00
137_Y	312_L	0.687	1.00
46_F	191_S	0.686	1.00
104_A	108_S	0.686	1.00
395_T	402_V	0.684	1.00
369_I	373_A	0.684	1.00
96_Y	288_I	0.683	1.00
392_G	401_L	0.682	1.00
319_L	325_G	0.681	1.00
349_V	353_R	0.681	1.00
385_G	392_G	0.680	1.00
108_S	111_L	0.679	1.00
389_L	394_V	0.679	1.00
359_G	362_R	0.678	1.00
53_S	369_I	0.677	1.00
392_G	395_T	0.676	1.00
318_M	325_G	0.676	1.00
380_F	384_L	0.676	1.00
294_R	308_K	0.676	1.00
60_E	364_P	0.675	1.00
392_G	397_F	0.673	1.00
293_E	311_L	0.672	1.00
101_A	330_I	0.672	1.00
41_I	45_I	0.672	1.00
130_V	133_L	0.672	1.00
58_S	345_T	0.671	1.00
44_F	197_S	0.670	1.00
55_G	201_F	0.669	1.00
62_S	218_I	0.667	1.00
350_I	370_Q	0.667	1.00
140_I	207_L	0.667	1.00
41_I	234_I	0.667	1.00
362_R	365_A	0.665	1.00
366_F	371_V	0.665	1.00
95_S	338_I	0.664	1.00
363_S	366_F	0.663	1.00
235_S	239_S	0.662	1.00
215_E	360_S	0.662	1.00
375_I	378_A	0.662	1.00
236_V	240_M	0.660	1.00
6_L	10_W	0.659	1.00
403_Y	407_R	0.659	1.00
19_N	288_I	0.657	1.00
136_D	312_L	0.657	1.00
139_G	142_T	0.653	1.00
224_M	227_I	0.653	1.00
57_N	373_A	0.652	1.00
367_P	370_Q	0.651	1.00
122_Y	323_L	0.649	1.00
142_T	145_E	0.648	1.00
73_Y	89_G	0.647	1.00
240_M	256_L	0.646	1.00
210_S	297_R	0.645	1.00
21_I	232_I	0.644	1.00
28_M	331_A	0.641	1.00
99_G	102_A	0.640	1.00
205_V	222_I	0.639	1.00
25_I	28_M	0.639	1.00
113_L	275_I	0.638	1.00
211_T	218_I	0.638	1.00
133_L	289_I	0.638	1.00
31_S	328_E	0.638	1.00
280_A	283_S	0.638	1.00
22_G	233_Y	0.637	1.00
35_V	189_T	0.636	1.00
390_E	397_F	0.636	1.00
376_L	380_F	0.635	1.00
29_A	237_I	0.634	1.00
153_I	276_S	0.634	1.00
110_Y	257_S	0.631	1.00
111_L	128_L	0.630	1.00
292_S	296_L	0.630	1.00
393_V	396_L	0.630	1.00
97_V	315_G	0.629	1.00
320_A	324_L	0.628	1.00
272_I	276_S	0.628	1.00
59_A	63_S	0.627	1.00
328_E	331_A	0.626	1.00
56_L	361_F	0.623	1.00
128_L	285_T	0.623	1.00
103_T	285_T	0.623	1.00
55_G	59_A	0.622	1.00
79_T	352_V	0.620	1.00
73_Y	85_G	0.618	1.00
80_L	348_E	0.616	1.00
61_L	79_T	0.615	1.00
386_L	393_V	0.615	1.00
62_S	205_V	0.614	1.00
385_G	391_I	0.614	1.00
386_L	392_G	0.613	1.00
370_Q	384_L	0.611	1.00
17_L	20_I	0.611	1.00
186_G	189_T	0.610	1.00
180_F	184_I	0.610	1.00
239_S	242_D	0.609	1.00
216_K	219_P	0.608	1.00
393_V	399_G	0.605	1.00
171_I	178_P	0.605	1.00
188_L	383_S	0.604	1.00
129_I	323_L	0.604	1.00
392_G	402_V	0.603	1.00
374_I	384_L	0.603	1.00
256_L	264_H	0.603	1.00
199_S	202_N	0.601	1.00
53_S	373_A	0.600	1.00
144_A	286_L	0.599	1.00
336_F	381_M	0.597	1.00
176_F	241_V	0.597	1.00
228_I	231_I	0.597	1.00
116_L	119_T	0.595	1.00
10_W	13_L	0.594	1.00
403_Y	406_L	0.592	1.00
91_F	341_S	0.590	1.00
126_V	324_L	0.589	1.00
391_I	395_T	0.589	1.00
321_S	324_L	0.589	1.00
206_T	291_A	0.587	1.00
153_I	157_S	0.587	1.00
164_T	168_I	0.584	1.00
47_T	198_Y	0.584	1.00
103_T	281_T	0.579	1.00
143_V	290_V	0.578	1.00
356_G	362_R	0.577	1.00
236_V	256_L	0.576	1.00
105_L	325_G	0.576	1.00
72_V	206_T	0.574	1.00
250_G	253_S	0.573	1.00
5_K	212_K	0.572	1.00
260_L	269_L	0.572	1.00
218_I	222_I	0.571	1.00
380_F	383_S	0.570	1.00
275_I	279_L	0.569	1.00
370_Q	381_M	0.569	1.00
19_N	203_T	0.568	1.00
289_I	312_L	0.568	1.00
385_G	390_E	0.567	1.00
50_F	53_S	0.567	1.00
47_T	195_F	0.567	1.00
17_L	151_V	0.566	1.00
97_V	318_M	0.565	1.00
214_G	217_V	0.563	1.00
338_I	341_S	0.562	1.00
251_Q	255_P	0.562	1.00
142_T	146_V	0.562	1.00
210_S	308_K	0.561	1.00
255_P	259_A	0.561	1.00
56_L	364_P	0.560	1.00
394_V	399_G	0.557	1.00
370_Q	376_L	0.557	1.00
314_V	318_M	0.557	1.00
244_M	258_L	0.556	1.00
76_T	85_G	0.555	1.00
131_I	135_L	0.554	1.00
60_E	64_I	0.553	1.00
91_F	95_S	0.553	1.00
171_I	177_V	0.549	1.00
356_G	360_S	0.548	1.00
88_V	341_S	0.547	1.00
72_V	345_T	0.547	1.00
25_I	158_L	0.546	1.00
31_S	34_S	0.544	1.00
72_V	202_N	0.544	1.00
32_T	194_A	0.542	1.00
99_G	103_T	0.542	1.00
393_V	400_I	0.540	1.00
386_L	399_G	0.539	1.00
352_V	359_G	0.538	1.00
309_H	312_L	0.538	1.00
169_V	239_S	0.538	1.00
36_A	43_A	0.537	1.00
377_S	384_L	0.537	1.00
27_V	30_G	0.536	1.00
71_G	205_V	0.535	1.00
404_E	407_R	0.534	1.00
38_P	41_I	0.533	1.00
57_N	363_S	0.532	1.00
91_F	340_F	0.532	1.00
228_I	235_S	0.530	1.00
321_S	325_G	0.529	1.00
149_I	152_I	0.529	1.00
148_T	152_I	0.528	1.00
293_E	315_G	0.527	1.00
156_S	159_I	0.526	1.00
25_I	29_A	0.526	1.00
396_L	400_I	0.526	1.00
227_I	230_S	0.526	1.00
32_T	190_T	0.526	1.00
197_S	233_Y	0.522	1.00
397_F	400_I	0.522	1.00
243_A	263_I	0.522	1.00
311_L	315_G	0.521	1.00
171_I	242_D	0.521	1.00
214_G	218_I	0.520	1.00
127_I	130_V	0.520	1.00
211_T	221_A	0.518	1.00
388_S	395_T	0.517	1.00
56_L	369_I	0.517	1.00
95_S	337_G	0.517	1.00
149_I	153_I	0.516	1.00
29_A	33_I	0.515	1.00
118_K	121_Y	0.514	1.00
386_L	403_Y	0.513	1.00
320_A	323_L	0.513	1.00
389_L	406_L	0.513	1.00
16_G	221_A	0.513	1.00
367_P	382_I	0.512	1.00
385_G	395_T	0.512	1.00
8_T	141_G	0.510	1.00
151_V	154_N	0.509	1.00
130_V	313_V	0.509	1.00
106_G	110_Y	0.509	1.00
44_F	237_I	0.508	1.00
204_I	218_I	0.508	1.00
296_L	300_S	0.508	1.00
206_T	295_T	0.507	1.00
311_L	314_V	0.505	1.00
27_V	281_T	0.504	1.00
64_I	352_V	0.504	1.00
54_I	202_N	0.503	1.00
153_I	279_L	0.503	1.00
148_T	151_V	0.503	1.00
244_M	248_Y	0.503	1.00
113_L	271_L	0.502	1.00
16_G	20_I	0.502	1.00
43_A	187_V	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3l1lA	2	0.9568	100	0.277	Contact Map
3giaA	1	0.9784	100	0.322	Contact Map
4djkA	2	0.9281	100	0.375	Contact Map
3dh4A	3	0.9496	98.6	0.86	Contact Map
2jlnA	1	0.9544	98.5	0.863	Contact Map
2xq2A	2	0.9448	98.4	0.867	Contact Map
4wgvA	2	0.8537	97.9	0.884	Contact Map
2a65A	2	0.9688	97.6	0.89	Contact Map
4xp4A	1	0.976	95.8	0.913	Contact Map
4us3A	1	0.9161	95.7	0.914	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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