GLPK1 - SULSO - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

GLPK1 - Glycerol kinase 1

UniProt:	Q97XW1	Sequences: MNTMSHKFVLALDEGTTSARAILFDSDLNIVNIGQYEFPQYYPQPGYVEHDPEEIWEAQMLAVKKAISKIDAKQIVAIGITNQRETTVLWDAKSGKPVYNAIVWQDRRTSPITDWLKANYFKMIKDKTGLVPDPYFSASKIKWILDNVPNVREKAERGEIKFGTLDTYLIWRLTNGKAHVTDYSNASRTMLFNINKLECDREILELLKIPESILPEVKPSSEIYGYSEALGNLIPISGDAGDQQAALFGQVAFNVGEIKATYGTGSFILMNIGNNPIRSENLLTTIAWGLEKNKATYALEGSIFITGAAVQWFRDGLRAIDVSDEIEPLASNVEDNGGVYFVPAFVGLGAPYWDPYARGLIIGITRGTTKAHIARAILESMAYQTRDVIEVMQKESGISINSLKVDGGAAKDNLLMQFQADILGIKVIRPKVMETTSMGVAMLAGLGVGLWNSLEELRSIWKVDKEFIPSMSEEKRRALYSGWKEAVKRAMGWAKVVGGQV	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	501 (471)
Sequences:	12503 (8490)
Seq/√Len:	391.2

ECOLI - GLPK ARAB LSRK XYLB LYXK RHAB FUCK YGCE
BACSU - XYLB GNTK GLPK ARAB YOAC RHAB
HALSA - GLPK
SULSO - GLPK1 GLPK2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
112_I	146_D	3.757	1.00
201_R	211_E	3.670	1.00
25_D	29_N	3.395	1.00
21_A	62_A	3.258	1.00
115_W	146_D	3.253	1.00
193_N	196_K	2.868	1.00
386_R	480_Y	2.857	1.00
426_K	468_I	2.793	1.00
127_K	200_D	2.776	1.00
393_Q	425_I	2.753	1.00
386_R	390_E	2.745	1.00
98_V	151_V	2.683	1.00
36_Y	61_L	2.682	1.00
417_Q	421_D	2.674	1.00
41_Y	100_N	2.660	1.00
413_N	465_K	2.625	1.00
361_I	373_I	2.613	1.00
34_G	65_K	2.577	1.00
402_S	428_I	2.563	1.00
333_V	372_H	2.545	1.00
452_N	456_E	2.536	1.00
36_Y	65_K	2.535	1.00
192_F	217_V	2.520	1.00
219_P	222_E	2.512	1.00
453_S	456_E	2.484	1.00
56_W	172_R	2.469	1.00
99_Y	148_V	2.442	1.00
23_L	66_A	2.400	1.00
91_D	154_K	2.374	1.00
92_A	156_E	2.374	1.00
53_E	172_R	2.370	1.00
322_V	325_E	2.314	1.00
386_R	477_R	2.308	1.00
91_D	94_S	2.298	1.00
193_N	200_D	2.186	1.00
204_L	211_E	2.138	1.00
240_A	245_A	2.103	1.00
22_I	437_S	2.095	1.00
12_L	59_Q	2.076	1.00
201_R	205_E	2.075	1.00
176_G	216_E	2.074	1.00
337_G	372_H	2.061	1.00
170_I	239_D	2.046	1.00
198_E	211_E	2.024	1.00
7_K	76_V	2.012	1.00
18_S	35_Q	2.001	1.00
309_A	377_I	1.982	1.00
470_S	473_E	1.963	1.00
115_W	119_N	1.921	1.00
321_D	325_E	1.920	1.00
341_F	361_I	1.910	1.00
123_M	126_D	1.905	1.00
39_P	54_E	1.904	1.00
266_S	306_T	1.900	1.00
53_E	96_K	1.884	1.00
174_T	236_I	1.862	1.00
431_K	462_K	1.859	1.00
9_V	445_G	1.858	1.00
393_Q	399_S	1.856	1.00
332_N	371_A	1.856	1.00
10_L	63_V	1.848	1.00
369_T	372_H	1.847	1.00
44_Q	47_Y	1.838	1.00
340_Y	482_G	1.836	1.00
65_K	69_K	1.835	1.00
254_N	458_R	1.828	1.00
405_V	416_M	1.814	1.00
424_G	474_E	1.799	1.00
480_Y	484_K	1.790	1.00
10_L	21_A	1.789	1.00
14_E	19_A	1.775	1.00
8_F	31_V	1.772	1.00
157_R	179_H	1.770	1.00
325_E	328_P	1.763	1.00
313_F	377_I	1.717	1.00
142_K	146_D	1.717	1.00
428_I	466_E	1.708	1.00
127_K	202_E	1.694	1.00
237_S	447_G	1.676	1.00
421_D	473_E	1.670	1.00
218_K	222_E	1.664	1.00
123_M	202_E	1.660	1.00
114_D	118_A	1.653	1.00
95_G	171_W	1.648	1.00
123_M	127_K	1.639	1.00
8_F	23_L	1.633	1.00
180_V	218_K	1.630	1.00
89_L	144_I	1.623	1.00
421_D	470_S	1.608	1.00
91_D	96_K	1.593	1.00
223_I	226_Y	1.583	1.00
426_K	466_E	1.572	1.00
257_E	402_S	1.569	1.00
311_Q	315_D	1.566	1.00
383_Y	479_L	1.555	1.00
474_E	477_R	1.547	1.00
88_V	165_L	1.543	1.00
117_K	121_F	1.536	1.00
111_P	115_W	1.532	1.00
89_L	213_I	1.522	1.00
223_I	237_S	1.518	1.00
9_V	450_L	1.513	1.00
7_K	74_Q	1.509	1.00
41_Y	54_E	1.483	1.00
328_P	332_N	1.473	1.00
327_E	331_S	1.465	1.00
150_N	153_E	1.463	1.00
122_K	126_D	1.446	1.00
34_G	62_A	1.445	1.00
390_E	484_K	1.443	1.00
60_M	229_A	1.441	1.00
358_R	365_T	1.439	1.00
34_G	66_A	1.431	1.00
472_S	475_K	1.422	1.00
329_L	371_A	1.415	1.00
51_D	54_E	1.414	1.00
329_L	332_N	1.408	1.00
375_R	379_E	1.400	1.00
170_I	224_Y	1.388	1.00
32_N	69_K	1.388	1.00
390_E	393_Q	1.382	1.00
67_I	72_A	1.381	1.00
445_G	451_W	1.380	1.00
414_L	418_F	1.371	1.00
143_W	147_N	1.367	1.00
53_E	57_E	1.366	1.00
26_S	450_L	1.365	1.00
77_A	444_A	1.358	1.00
413_N	429_R	1.350	1.00
226_Y	233_L	1.347	1.00
431_K	464_D	1.340	1.00
32_N	66_A	1.335	1.00
231_G	234_I	1.333	1.00
326_I	374_A	1.332	1.00
56_W	60_M	1.330	1.00
210_P	213_I	1.322	1.00
348_L	351_P	1.306	1.00
258_I	400_I	1.300	1.00
413_N	467_F	1.299	1.00
341_F	345_F	1.298	1.00
303_I	384_Q	1.293	1.00
12_L	63_V	1.286	1.00
168_Y	172_R	1.285	1.00
262_Y	419_Q	1.282	1.00
402_S	426_K	1.274	1.00
84_R	241_G	1.272	1.00
382_A	418_F	1.272	1.00
90_W	163_G	1.271	1.00
110_S	114_D	1.266	1.00
330_A	414_L	1.265	1.00
123_M	206_L	1.256	1.00
218_K	224_Y	1.255	1.00
183_Y	197_L	1.255	1.00
475_K	478_A	1.249	1.00
223_I	235_P	1.246	1.00
473_E	476_R	1.244	1.00
19_A	59_Q	1.243	1.00
329_L	370_K	1.239	1.00
424_G	476_R	1.238	1.00
195_N	276_P	1.230	1.00
382_A	419_Q	1.229	1.00
260_A	419_Q	1.217	1.00
256_G	401_N	1.209	1.00
204_L	214_L	1.208	1.00
429_R	467_F	1.207	1.00
382_A	422_I	1.205	1.00
138_A	207_L	1.204	1.00
328_P	331_S	1.202	1.00
174_T	225_G	1.195	1.00
71_D	74_Q	1.191	1.00
341_F	377_I	1.190	1.00
170_I	180_V	1.187	1.00
202_E	205_E	1.183	1.00
339_V	368_T	1.182	1.00
19_A	58_A	1.180	1.00
145_L	152_R	1.176	1.00
112_I	142_K	1.173	1.00
24_F	30_I	1.173	1.00
240_A	443_L	1.163	1.00
424_G	477_R	1.161	1.00
57_E	61_L	1.158	1.00
176_G	180_V	1.157	1.00
124_I	132_P	1.153	1.00
274_N	294_K	1.152	1.00
416_M	467_F	1.151	1.00
418_F	422_I	1.150	1.00
327_E	330_A	1.144	1.00
86_T	101_A	1.141	1.00
61_L	65_K	1.141	1.00
362_I	486_A	1.137	1.00
148_V	151_V	1.135	1.00
95_G	179_H	1.131	1.00
364_I	368_T	1.130	1.00
390_E	480_Y	1.126	1.00
387_D	484_K	1.121	1.00
51_D	100_N	1.121	1.00
12_L	21_A	1.112	1.00
49_E	100_N	1.106	1.00
254_N	257_E	1.104	1.00
119_N	206_L	1.100	1.00
111_P	114_D	1.098	1.00
255_V	273_G	1.098	1.00
305_I	309_A	1.097	1.00
317_L	373_I	1.094	1.00
7_K	26_S	1.089	1.00
113_T	132_P	1.089	1.00
155_A	213_I	1.083	1.00
254_N	455_E	1.082	1.00
8_F	74_Q	1.081	1.00
386_R	423_L	1.079	1.00
23_L	70_I	1.075	1.00
327_E	412_D	1.071	1.00
324_D	327_E	1.069	1.00
89_L	155_A	1.067	1.00
411_K	433_M	1.064	1.00
446_L	457_L	1.063	1.00
183_Y	192_F	1.062	1.00
55_I	165_L	1.062	1.00
150_N	154_K	1.057	1.00
89_L	141_I	1.056	1.00
59_Q	169_L	1.055	1.00
477_R	481_S	1.054	1.00
77_A	448_V	1.047	1.00
327_E	413_N	1.045	1.00
183_Y	217_V	1.043	1.00
114_D	117_K	1.042	1.00
305_I	308_A	1.040	1.00
204_L	209_I	1.036	1.00
40_Q	50_H	1.035	1.00
223_I	447_G	1.034	1.00
108_R	143_W	1.033	1.00
34_G	69_K	1.031	1.00
257_E	404_K	1.031	1.00
52_P	88_V	1.029	1.00
442_M	457_L	1.029	1.00
24_F	441_A	1.028	1.00
9_V	448_V	1.024	1.00
99_Y	151_V	1.023	1.00
368_T	372_H	1.022	1.00
163_G	179_H	1.022	1.00
80_I	170_I	1.021	1.00
404_K	428_I	1.020	1.00
470_S	474_E	1.014	1.00
181_T	186_A	1.011	1.00
38_F	58_A	1.008	1.00
325_E	329_L	1.003	1.00
456_E	459_S	1.001	1.00
78_I	234_I	1.001	1.00
65_K	68_S	0.998	1.00
48_V	105_Q	0.994	1.00
60_M	64_K	0.994	1.00
389_I	423_L	0.993	1.00
138_A	190_M	0.989	1.00
381_M	409_A	0.987	1.00
254_N	401_N	0.984	1.00
258_I	270_M	0.983	1.00
323_S	326_I	0.980	1.00
383_Y	422_I	0.980	1.00
8_F	70_I	0.979	1.00
192_F	196_K	0.979	1.00
64_K	68_S	0.978	1.00
54_E	57_E	0.977	1.00
59_Q	63_V	0.975	1.00
482_G	485_E	0.973	1.00
112_I	115_W	0.970	1.00
442_M	460_I	0.964	1.00
77_A	237_S	0.963	1.00
21_A	66_A	0.962	1.00
141_I	162_F	0.961	1.00
471_M	476_R	0.958	1.00
359_G	364_I	0.956	1.00
9_V	77_A	0.954	1.00
341_F	376_A	0.954	1.00
180_V	224_Y	0.953	1.00
152_R	155_A	0.953	1.00
445_G	450_L	0.952	1.00
112_I	147_N	0.950	1.00
226_Y	235_P	0.948	1.00
259_K	406_D	0.947	1.00
309_A	341_F	0.946	1.00
67_I	75_I	0.937	1.00
10_L	23_L	0.931	1.00
329_L	374_A	0.930	1.00
330_A	333_V	0.930	1.00
335_D	338_G	0.927	1.00
409_A	415_L	0.924	1.00
386_R	422_I	0.922	1.00
124_I	190_M	0.922	1.00
197_L	219_P	0.915	1.00
463_V	466_E	0.913	1.00
76_V	448_V	0.912	1.00
89_L	162_F	0.909	1.00
25_D	31_V	0.909	1.00
115_W	118_A	0.908	1.00
167_T	181_T	0.907	1.00
24_F	438_M	0.906	1.00
375_R	414_L	0.905	1.00
149_P	153_E	0.902	1.00
289_G	295_A	0.902	1.00
126_D	278_R	0.901	1.00
81_T	436_T	0.900	1.00
197_L	295_A	0.898	1.00
402_S	466_E	0.896	1.00
126_D	195_N	0.895	1.00
155_A	162_F	0.894	1.00
156_E	212_S	0.891	1.00
144_I	151_V	0.889	1.00
183_Y	219_P	0.887	1.00
23_L	75_I	0.886	1.00
471_M	474_E	0.883	1.00
96_K	172_R	0.882	1.00
80_I	169_L	0.880	1.00
237_S	448_V	0.880	1.00
364_I	373_I	0.880	1.00
99_Y	144_I	0.874	1.00
151_V	154_K	0.874	1.00
451_W	457_L	0.874	1.00
70_I	74_Q	0.872	1.00
403_L	423_L	0.871	1.00
383_Y	480_Y	0.871	1.00
266_S	385_T	0.871	1.00
10_L	75_I	0.871	1.00
351_P	354_D	0.869	1.00
73_K	231_G	0.869	1.00
115_W	142_K	0.866	1.00
423_L	426_K	0.864	1.00
268_I	389_I	0.862	1.00
87_T	162_F	0.861	1.00
218_K	238_G	0.851	1.00
446_L	453_S	0.846	1.00
14_E	169_L	0.843	1.00
75_I	234_I	0.842	1.00
320_I	326_I	0.834	1.00
230_L	233_L	0.826	1.00
183_Y	289_G	0.825	1.00
80_I	173_L	0.824	1.00
36_Y	62_A	0.823	1.00
98_V	154_K	0.823	1.00
85_E	188_R	0.821	1.00
79_G	237_S	0.821	1.00
333_V	336_N	0.820	1.00
142_K	145_L	0.820	1.00
230_L	234_I	0.816	1.00
164_T	189_T	0.813	1.00
267_F	302_S	0.811	1.00
113_T	134_P	0.810	1.00
331_S	414_L	0.809	1.00
410_A	433_M	0.805	1.00
14_E	59_Q	0.805	1.00
246_A	406_D	0.802	1.00
446_L	454_L	0.801	1.00
389_I	393_Q	0.800	1.00
312_W	315_D	0.798	1.00
138_A	191_L	0.795	1.00
361_I	377_I	0.792	1.00
117_K	132_P	0.791	1.00
63_V	67_I	0.790	1.00
226_Y	232_N	0.790	1.00
199_C	214_L	0.787	1.00
37_E	311_Q	0.787	1.00
270_M	392_M	0.786	1.00
291_E	295_A	0.785	1.00
471_M	475_K	0.784	1.00
113_T	139_S	0.784	1.00
243_Q	267_F	0.782	1.00
142_K	208_K	0.781	1.00
378_L	418_F	0.780	1.00
64_K	229_A	0.779	1.00
107_R	133_D	0.776	1.00
485_E	488_K	0.776	1.00
338_G	479_L	0.775	1.00
258_I	403_L	0.774	1.00
92_A	154_K	0.772	1.00
33_I	434_E	0.771	1.00
84_R	300_E	0.771	1.00
37_E	314_R	0.770	1.00
478_A	482_G	0.768	1.00
405_V	419_Q	0.766	1.00
336_N	340_Y	0.765	1.00
24_F	432_V	0.763	1.00
422_I	476_R	0.761	1.00
90_W	95_G	0.760	1.00
198_E	216_E	0.760	1.00
417_Q	470_S	0.760	1.00
340_Y	362_I	0.760	1.00
475_K	479_L	0.760	1.00
306_T	381_M	0.758	1.00
171_W	179_H	0.758	1.00
180_V	216_E	0.756	1.00
313_F	374_A	0.754	1.00
198_E	201_R	0.754	1.00
405_V	429_R	0.753	1.00
260_A	266_S	0.752	1.00
193_N	198_E	0.752	1.00
347_G	351_P	0.751	1.00
202_E	206_L	0.751	1.00
326_I	330_A	0.751	1.00
378_L	412_D	0.750	1.00
36_Y	58_A	0.749	1.00
345_F	348_L	0.748	1.00
52_P	100_N	0.747	1.00
186_A	199_C	0.744	1.00
184_S	288_W	0.743	1.00
428_I	463_V	0.740	1.00
84_R	185_N	0.740	1.00
324_D	328_P	0.739	1.00
166_D	239_D	0.738	1.00
111_P	147_N	0.738	1.00
260_A	385_T	0.738	1.00
43_P	47_Y	0.737	1.00
90_W	179_H	0.737	1.00
16_T	103_V	0.735	1.00
104_W	265_G	0.734	1.00
111_P	146_D	0.734	1.00
387_D	480_Y	0.732	1.00
57_E	60_M	0.730	1.00
127_K	193_N	0.730	1.00
76_V	450_L	0.727	1.00
11_A	79_G	0.727	1.00
391_V	395_E	0.725	1.00
271_N	296_T	0.725	1.00
54_E	58_A	0.725	1.00
91_D	98_V	0.724	1.00
228_E	232_N	0.723	1.00
250_Q	406_D	0.723	1.00
30_I	33_I	0.722	1.00
323_S	327_E	0.722	1.00
192_F	197_L	0.720	1.00
383_Y	476_R	0.719	1.00
410_A	416_M	0.718	1.00
49_E	108_R	0.717	1.00
124_I	203_I	0.717	1.00
445_G	449_G	0.716	1.00
38_F	50_H	0.716	1.00
77_A	235_P	0.715	1.00
313_F	373_I	0.712	1.00
90_W	157_R	0.711	1.00
357_A	361_I	0.707	1.00
386_R	484_K	0.706	1.00
301_G	388_V	0.705	1.00
250_Q	259_K	0.704	1.00
337_G	368_T	0.704	1.00
479_L	482_G	0.702	1.00
53_E	168_Y	0.702	1.00
181_T	215_P	0.700	1.00
60_M	172_R	0.696	1.00
478_A	481_S	0.695	1.00
232_N	235_P	0.695	1.00
95_G	156_E	0.695	1.00
89_L	98_V	0.695	1.00
473_E	477_R	0.695	1.00
246_A	436_T	0.695	1.00
91_D	156_E	0.695	1.00
19_A	38_F	0.694	1.00
72_A	75_I	0.692	0.99
122_K	125_K	0.692	0.99
181_T	217_V	0.692	0.99
347_G	350_A	0.691	0.99
14_E	58_A	0.691	0.99
227_S	230_L	0.690	0.99
229_A	233_L	0.689	0.99
273_G	296_T	0.689	0.99
331_S	417_Q	0.689	0.99
382_A	415_L	0.689	0.99
200_D	203_I	0.689	0.99
405_V	427_V	0.689	0.99
291_E	294_K	0.689	0.99
350_A	353_W	0.687	0.99
184_S	240_A	0.687	0.99
357_A	360_L	0.685	0.99
345_F	351_P	0.681	0.99
170_I	174_T	0.680	0.99
88_V	101_A	0.680	0.99
401_N	425_I	0.673	0.99
418_F	476_R	0.673	0.99
318_R	321_D	0.672	0.99
53_E	97_P	0.671	0.99
63_V	66_A	0.669	0.99
455_E	458_R	0.669	0.99
67_I	70_I	0.667	0.99
141_I	191_L	0.664	0.99
224_Y	238_G	0.664	0.99
220_S	239_D	0.664	0.99
318_R	370_K	0.664	0.99
333_V	337_G	0.664	0.99
59_Q	62_A	0.660	0.99
252_A	257_E	0.660	0.99
460_I	463_V	0.660	0.99
354_D	357_A	0.659	0.99
484_K	488_K	0.658	0.99
426_K	469_P	0.658	0.99
223_I	448_V	0.656	0.99
260_A	403_L	0.656	0.99
153_E	157_R	0.654	0.99
22_I	30_I	0.652	0.99
114_D	356_Y	0.650	0.99
128_T	203_I	0.650	0.99
303_I	388_V	0.649	0.99
412_D	415_L	0.649	0.99
348_L	354_D	0.647	0.99
9_V	76_V	0.647	0.99
82_N	185_N	0.647	0.99
168_Y	171_W	0.647	0.99
333_V	371_A	0.646	0.99
321_D	370_K	0.645	0.99
331_S	413_N	0.644	0.99
242_D	264_T	0.644	0.99
102_I	108_R	0.644	0.99
281_N	299_L	0.643	0.99
310_V	326_I	0.641	0.99
61_L	64_K	0.641	0.99
116_L	207_L	0.640	0.99
276_P	284_T	0.639	0.99
403_L	427_V	0.639	0.99
402_S	425_I	0.638	0.99
451_W	460_I	0.637	0.99
132_P	190_M	0.637	0.99
251_V	461_W	0.635	0.99
326_I	329_L	0.635	0.99
24_F	437_S	0.634	0.99
311_Q	323_S	0.633	0.99
313_F	317_L	0.632	0.99
403_L	425_I	0.630	0.99
90_W	168_Y	0.629	0.99
116_L	139_S	0.629	0.99
413_N	417_Q	0.628	0.99
142_K	152_R	0.625	0.99
344_A	348_L	0.625	0.99
352_Y	387_D	0.623	0.99
90_W	171_W	0.622	0.99
477_R	480_Y	0.621	0.99
336_N	372_H	0.621	0.99
266_S	419_Q	0.621	0.99
64_K	230_L	0.619	0.99
272_I	276_P	0.619	0.99
269_L	298_A	0.618	0.99
442_M	446_L	0.618	0.99
379_E	418_F	0.618	0.99
167_T	179_H	0.617	0.99
320_I	325_E	0.616	0.99
197_L	289_G	0.615	0.99
53_E	100_N	0.613	0.99
60_M	63_V	0.612	0.99
314_R	323_S	0.610	0.99
338_G	375_R	0.609	0.99
468_I	471_M	0.608	0.99
26_S	76_V	0.608	0.99
330_A	378_L	0.607	0.99
432_V	438_M	0.606	0.99
417_Q	467_F	0.606	0.99
341_F	380_S	0.606	0.99
345_F	349_G	0.604	0.99
481_S	484_K	0.603	0.99
331_S	334_E	0.602	0.99
257_E	401_N	0.601	0.99
330_A	375_R	0.601	0.99
145_L	208_K	0.601	0.99
257_E	458_R	0.599	0.99
154_K	157_R	0.599	0.99
351_P	355_P	0.599	0.99
53_E	56_W	0.598	0.99
88_V	97_P	0.597	0.99
330_A	374_A	0.597	0.99
110_S	134_P	0.597	0.99
87_T	137_S	0.597	0.99
195_N	198_E	0.596	0.99
83_Q	104_W	0.595	0.98
205_E	208_K	0.592	0.98
424_G	471_M	0.592	0.98
329_L	333_V	0.591	0.98
338_G	379_E	0.590	0.98
327_E	414_L	0.590	0.98
476_R	479_L	0.588	0.98
219_P	289_G	0.588	0.98
82_N	165_L	0.588	0.98
27_D	459_S	0.588	0.98
102_I	144_I	0.587	0.98
416_M	429_R	0.587	0.98
338_G	372_H	0.585	0.98
272_I	278_R	0.584	0.98
120_Y	203_I	0.584	0.98
262_Y	405_V	0.584	0.98
142_K	207_L	0.584	0.98
429_R	464_D	0.583	0.98
241_G	244_Q	0.582	0.98
457_L	460_I	0.582	0.98
49_E	99_Y	0.581	0.98
298_A	302_S	0.580	0.98
243_Q	261_T	0.580	0.98
30_I	432_V	0.580	0.98
216_E	222_E	0.580	0.98
52_P	101_A	0.578	0.98
375_R	418_F	0.577	0.98
335_D	372_H	0.576	0.98
235_P	448_V	0.576	0.98
78_I	236_I	0.576	0.98
342_V	486_A	0.572	0.98
209_I	214_L	0.572	0.98
109_T	139_S	0.572	0.98
249_G	435_T	0.570	0.98
184_S	220_S	0.570	0.98
136_F	188_R	0.569	0.98
337_G	367_G	0.568	0.98
446_L	451_W	0.567	0.98
400_I	425_I	0.566	0.98
108_R	147_N	0.566	0.98
342_V	360_L	0.563	0.98
336_N	375_R	0.563	0.98
358_R	362_I	0.562	0.98
8_F	73_K	0.561	0.98
33_I	69_K	0.560	0.98
86_T	103_V	0.560	0.98
89_L	99_Y	0.560	0.98
342_V	487_V	0.559	0.98
273_G	276_P	0.559	0.98
95_G	157_R	0.558	0.98
247_L	287_A	0.558	0.98
442_M	461_W	0.557	0.98
446_L	449_G	0.557	0.98
381_M	415_L	0.556	0.98
451_W	459_S	0.556	0.98
97_P	100_N	0.556	0.98
29_N	431_K	0.554	0.98
274_N	296_T	0.552	0.98
55_I	101_A	0.552	0.98
266_S	303_I	0.552	0.98
410_A	429_R	0.551	0.98
379_E	383_Y	0.549	0.97
272_I	299_L	0.547	0.97
42_Y	48_V	0.546	0.97
189_T	199_C	0.546	0.97
26_S	445_G	0.545	0.97
28_L	460_I	0.545	0.97
203_I	207_L	0.544	0.97
205_E	210_P	0.544	0.97
17_T	20_R	0.543	0.97
260_A	268_I	0.543	0.97
191_L	214_L	0.542	0.97
141_I	213_I	0.541	0.97
124_I	207_L	0.541	0.97
339_V	373_I	0.538	0.97
346_V	366_R	0.538	0.97
247_L	269_L	0.537	0.97
275_N	278_R	0.536	0.97
176_G	218_K	0.535	0.97
220_S	240_A	0.535	0.97
47_Y	102_I	0.535	0.97
336_N	379_E	0.534	0.97
9_V	451_W	0.534	0.97
311_Q	314_R	0.534	0.97
84_R	188_R	0.533	0.97
420_A	427_V	0.533	0.97
231_G	235_P	0.532	0.97
166_D	181_T	0.532	0.97
9_V	26_S	0.532	0.97
221_S	447_G	0.531	0.97
176_G	226_Y	0.531	0.97
335_D	375_R	0.530	0.97
134_P	355_P	0.530	0.97
248_F	442_M	0.529	0.97
417_Q	420_A	0.528	0.97
163_G	171_W	0.528	0.97
81_T	440_V	0.527	0.97
316_G	369_T	0.527	0.97
186_A	189_T	0.527	0.97
352_Y	484_K	0.526	0.97
195_N	278_R	0.526	0.97
326_I	412_D	0.525	0.97
287_A	297_Y	0.525	0.97
90_W	156_E	0.524	0.97
307_G	311_Q	0.524	0.97
130_L	136_F	0.524	0.97
7_K	450_L	0.524	0.97
121_F	125_K	0.524	0.97
419_Q	423_L	0.522	0.97
438_M	442_M	0.521	0.97
418_F	479_L	0.521	0.97
85_E	104_W	0.520	0.97
352_Y	487_V	0.518	0.96
261_T	406_D	0.517	0.96
437_S	440_V	0.517	0.96
139_S	190_M	0.516	0.96
385_T	419_Q	0.515	0.96
306_T	309_A	0.515	0.96
16_T	104_W	0.515	0.96
205_E	211_E	0.514	0.96
190_M	207_L	0.514	0.96
451_W	456_E	0.513	0.96
334_E	337_G	0.513	0.96
75_I	230_L	0.512	0.96
268_I	388_V	0.511	0.96
85_E	265_G	0.511	0.96
119_N	142_K	0.510	0.96
152_R	156_E	0.509	0.96
58_A	61_L	0.508	0.96
48_V	103_V	0.508	0.96
51_D	57_E	0.507	0.96
453_S	457_L	0.506	0.96
47_Y	108_R	0.506	0.96
83_Q	101_A	0.504	0.96
477_R	484_K	0.504	0.96
261_T	267_F	0.504	0.96
286_I	295_A	0.502	0.96
338_G	482_G	0.501	0.96
401_N	426_K	0.500	0.96
164_T	185_N	0.500	0.96

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3ll3A	2	0.9601	100	0.14	Contact Map
3ezwA	3	0.98	100	0.146	Contact Map
3h3nX	3	0.986	100	0.147	Contact Map
2d4wA	2	0.98	100	0.149	Contact Map
3wxlA	2	0.976	100	0.151	Contact Map
2zf5O	3	0.978	100	0.151	Contact Map
3g25A	3	0.98	100	0.153	Contact Map
2itmA	2	0.9281	100	0.16	Contact Map
2w40A	3	0.9721	100	0.164	Contact Map
2dpnA	2	0.9701	100	0.167	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0134 seconds.