Q97XT3 - SULSO - GREMLIN Contacts

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Q97XT3 - Polysaccharide biosynthesis related protein

UniProt:	Q97XT3	Sequences: MNPIKNTLKSLSVTTTNVIVALIFFIITAKITNPEFFGKVAIIQLLEVVTSAFFYFIPGQIITREISYLYARKEISKSVIGKFLSFPFLVLPLFLILLLFPNYVKLTIPYLFLYLLNGVMGSIMVGMDMFTETAITGNIFLIIRWGISIIAVLSHNIYLFIEIWTLGGIISVSMNYAFLSRKVGLILPSFDFAFLFKHFKEGLPLYLSSSATFLSSQGDRVTTAYLLGSYYLGLYQFSALVAGVPSMVLGALGGVLLPTASFYKALGKDEKKMSSISFRVLSLITFLAVIISIPTAVLVVEKFFPAYISGIKVLILLLLATTLPFPIGSLTNFIIAAKKSLRPFLILSLLNGGLVLLTSFLLIPRIGIIGGAISQAIVSTISSSFVLVYALKEDTFVLGKRESAILFMMPLIAFYEVFVDPPYLDFLLLLSVILLFKTFRIITAEDMKLIDSFLPSKLKFIISLMKAIS	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	469 (430)
Sequences:	17485 (15076)
Seq/√Len:	727.0

ECOLI - WZXC MURJ RFBX WZXE YGHQ
BACSU - EPSK TUAB SP5B YTGP YABM YKVU
HALSA - Q9HQQ5 Q9HRT3 Q9HSW2
SULSO - Q97XT3 Q7LXE2 Q97XG2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
432_V	435_L	3.902	1.00
129_M	132_E	3.535	1.00
41_A	236_Q	3.271	1.00
196_F	200_K	3.228	1.00
340_S	343_P	3.126	1.00
311_I	315_I	3.114	1.00
401_R	405_I	3.031	1.00
342_R	346_I	2.845	1.00
128_D	262_F	2.839	1.00
293_I	315_I	2.810	1.00
100_F	103_Y	2.754	1.00
340_S	393_E	2.627	1.00
297_V	301_E	2.560	1.00
323_L	380_T	2.523	1.00
234_L	309_S	2.381	1.00
296_A	311_I	2.347	1.00
228_G	231_Y	2.310	1.00
316_L	369_I	2.295	1.00
351_N	382_S	2.292	1.00
262_F	266_L	2.259	1.00
66_I	126_G	2.236	1.00
207_L	345_L	2.183	1.00
219_D	235_Y	2.165	1.00
313_V	368_I	2.164	1.00
64_R	68_Y	2.125	1.00
358_T	374_S	2.120	1.00
298_L	301_E	2.109	1.00
219_D	359_S	2.108	1.00
347_L	385_F	2.048	1.00
291_I	295_T	2.046	1.00
296_A	315_I	2.046	1.00
337_A	340_S	2.043	1.00
223_T	227_L	2.038	1.00
156_N	159_L	2.032	1.00
363_I	371_G	1.986	1.00
272_K	276_I	1.979	1.00
33_N	36_F	1.978	1.00
295_T	298_L	1.974	1.00
227_L	231_Y	1.954	1.00
65_E	201_E	1.913	1.00
9_K	131_T	1.898	1.00
312_K	369_I	1.862	1.00
192_F	196_F	1.841	1.00
77_K	81_G	1.829	1.00
286_F	410_P	1.821	1.00
222_T	363_I	1.818	1.00
285_T	325_F	1.797	1.00
42_I	224_A	1.797	1.00
316_L	376_A	1.790	1.00
362_L	374_S	1.758	1.00
370_G	374_S	1.755	1.00
131_T	135_I	1.749	1.00
264_K	337_A	1.742	1.00
354_L	381_I	1.740	1.00
297_V	311_I	1.733	1.00
402_E	405_I	1.708	1.00
291_I	413_A	1.695	1.00
227_L	368_I	1.692	1.00
316_L	373_I	1.672	1.00
40_V	44_Q	1.665	1.00
274_S	333_F	1.664	1.00
112_F	115_L	1.662	1.00
36_F	39_K	1.655	1.00
292_S	318_L	1.653	1.00
361_L	364_P	1.653	1.00
289_V	322_T	1.648	1.00
222_T	359_S	1.641	1.00
300_V	310_G	1.631	1.00
366_I	373_I	1.613	1.00
313_V	372_A	1.611	1.00
211_A	349_L	1.606	1.00
30_K	305_P	1.603	1.00
414_F	418_F	1.599	1.00
300_V	314_L	1.595	1.00
323_L	383_S	1.586	1.00
159_L	163_I	1.586	1.00
128_D	259_T	1.583	1.00
435_L	439_F	1.582	1.00
312_K	315_I	1.568	1.00
191_D	194_F	1.559	1.00
204_P	345_L	1.559	1.00
367_G	370_G	1.554	1.00
123_I	127_M	1.538	1.00
219_D	375_Q	1.530	1.00
384_S	388_V	1.516	1.00
362_L	366_I	1.513	1.00
68_Y	339_K	1.506	1.00
316_L	372_A	1.504	1.00
29_A	237_F	1.504	1.00
144_R	167_G	1.501	1.00
242_A	317_L	1.496	1.00
297_V	315_I	1.494	1.00
320_A	376_A	1.493	1.00
103_Y	106_L	1.489	1.00
275_S	279_R	1.472	1.00
359_S	363_I	1.471	1.00
432_V	436_F	1.467	1.00
223_T	371_G	1.453	1.00
388_V	392_K	1.448	1.00
223_T	232_L	1.443	1.00
75_I	78_S	1.441	1.00
374_S	378_V	1.437	1.00
78_S	82_K	1.434	1.00
309_S	312_K	1.430	1.00
256_L	277_S	1.426	1.00
230_Y	234_L	1.422	1.00
78_S	191_D	1.418	1.00
150_I	153_L	1.414	1.00
238_S	310_G	1.406	1.00
295_T	299_V	1.403	1.00
41_A	233_G	1.398	1.00
222_T	360_F	1.393	1.00
357_L	361_L	1.387	1.00
26_I	30_K	1.386	1.00
346_I	350_L	1.379	1.00
34_P	234_L	1.375	1.00
25_F	240_L	1.354	1.00
218_G	356_L	1.353	1.00
263_Y	268_K	1.351	1.00
102_N	106_L	1.347	1.00
355_V	359_S	1.345	1.00
282_S	286_F	1.344	1.00
231_Y	368_I	1.332	1.00
84_L	87_P	1.315	1.00
61_I	201_E	1.313	1.00
24_F	145_W	1.298	1.00
15_T	19_I	1.295	1.00
271_K	275_S	1.289	1.00
217_Q	220_R	1.282	1.00
330_L	387_L	1.278	1.00
81_G	85_S	1.272	1.00
22_L	26_I	1.270	1.00
222_T	226_L	1.269	1.00
347_L	389_Y	1.268	1.00
369_I	372_A	1.266	1.00
16_T	138_N	1.260	1.00
129_M	182_K	1.258	1.00
238_S	313_V	1.252	1.00
361_L	365_R	1.246	1.00
260_A	336_A	1.246	1.00
263_Y	273_M	1.234	1.00
347_L	386_V	1.233	1.00
143_I	170_I	1.228	1.00
417_V	420_D	1.222	1.00
274_S	330_L	1.219	1.00
109_P	112_F	1.212	1.00
158_Y	161_I	1.198	1.00
204_P	342_R	1.195	1.00
362_L	365_R	1.194	1.00
228_G	232_L	1.193	1.00
292_S	314_L	1.192	1.00
320_A	372_A	1.192	1.00
17_N	141_L	1.191	1.00
65_E	68_Y	1.189	1.00
79_V	83_F	1.186	1.00
414_F	417_V	1.186	1.00
136_T	175_N	1.184	1.00
201_E	341_L	1.183	1.00
19_I	23_I	1.178	1.00
211_A	345_L	1.176	1.00
211_A	352_G	1.175	1.00
203_L	207_L	1.167	1.00
164_W	168_G	1.166	1.00
313_V	369_I	1.165	1.00
42_I	232_L	1.165	1.00
65_E	197_K	1.165	1.00
146_G	150_I	1.159	1.00
234_L	310_G	1.158	1.00
78_S	81_G	1.157	1.00
237_F	304_F	1.157	1.00
418_F	421_P	1.156	1.00
409_M	413_A	1.155	1.00
223_T	235_Y	1.154	1.00
31_I	152_V	1.153	1.00
358_T	362_L	1.151	1.00
319_L	376_A	1.148	1.00
308_I	312_K	1.147	1.00
257_L	261_S	1.147	1.00
55_Y	59_G	1.144	1.00
300_V	311_I	1.144	1.00
208_S	344_F	1.144	1.00
151_A	154_S	1.141	1.00
147_I	163_I	1.140	1.00
29_A	304_F	1.137	1.00
185_L	188_P	1.130	1.00
176_Y	180_S	1.126	1.00
418_F	422_P	1.125	1.00
111_L	115_L	1.117	1.00
415_Y	418_F	1.109	1.00
333_F	390_A	1.108	1.00
37_F	41_A	1.102	1.00
388_V	391_L	1.094	1.00
215_S	355_V	1.093	1.00
354_L	358_T	1.088	1.00
343_P	389_Y	1.087	1.00
67_S	126_G	1.086	1.00
81_G	84_L	1.080	1.00
155_H	159_L	1.079	1.00
355_V	375_Q	1.079	1.00
13_V	134_A	1.076	1.00
353_G	357_L	1.075	1.00
39_K	229_S	1.074	1.00
320_A	323_L	1.073	1.00
259_T	262_F	1.072	1.00
366_I	370_G	1.071	1.00
355_V	378_V	1.068	1.00
101_P	105_K	1.064	1.00
289_V	293_I	1.062	1.00
326_P	383_S	1.062	1.00
173_S	177_A	1.060	1.00
62_I	83_F	1.059	1.00
346_I	349_L	1.059	1.00
40_V	160_F	1.058	1.00
296_A	314_L	1.054	1.00
136_T	174_M	1.050	1.00
79_V	82_K	1.043	1.00
308_I	311_I	1.042	1.00
290_I	410_P	1.037	1.00
349_L	353_G	1.034	1.00
14_T	18_V	1.032	1.00
199_F	202_G	1.027	1.00
69_L	72_R	1.027	1.00
10_S	255_V	1.022	1.00
359_S	375_Q	1.020	1.00
330_L	386_V	1.019	1.00
177_A	181_R	1.016	1.00
27_I	31_I	1.013	1.00
300_V	304_F	1.012	1.00
214_L	352_G	1.012	1.00
315_I	319_L	1.011	1.00
238_S	317_L	1.009	1.00
61_I	198_H	1.009	1.00
61_I	65_E	1.008	1.00
63_T	122_S	0.998	1.00
360_F	364_P	0.993	1.00
64_R	339_K	0.990	1.00
120_M	176_Y	0.989	1.00
197_K	339_K	0.987	1.00
163_I	167_G	0.986	1.00
293_I	319_L	0.982	1.00
317_L	372_A	0.979	1.00
20_V	145_W	0.979	1.00
11_L	251_A	0.978	1.00
7_T	255_V	0.976	1.00
334_I	389_Y	0.975	1.00
359_S	362_L	0.968	1.00
365_R	369_I	0.966	1.00
66_I	127_M	0.965	1.00
25_F	304_F	0.964	1.00
99_L	103_Y	0.962	1.00
44_Q	48_V	0.962	1.00
96_I	100_F	0.960	1.00
130_F	255_V	0.959	1.00
373_I	377_I	0.959	1.00
6_N	128_D	0.958	1.00
236_Q	240_L	0.956	1.00
80_I	123_I	0.951	1.00
376_A	379_S	0.951	1.00
85_S	89_L	0.949	1.00
413_A	417_V	0.948	1.00
162_E	165_T	0.948	1.00
299_V	303_F	0.946	1.00
242_A	321_T	0.946	1.00
219_D	355_V	0.945	1.00
199_F	203_L	0.944	1.00
293_I	296_A	0.943	1.00
167_G	171_S	0.942	1.00
174_M	178_F	0.942	1.00
162_E	166_L	0.942	1.00
301_E	308_I	0.941	1.00
239_A	243_G	0.939	1.00
420_D	423_Y	0.936	1.00
381_I	385_F	0.935	1.00
34_P	233_G	0.934	1.00
335_I	344_F	0.929	1.00
7_T	252_L	0.929	1.00
68_Y	72_R	0.924	1.00
287_L	290_I	0.924	1.00
10_S	134_A	0.922	1.00
433_I	437_K	0.921	1.00
132_E	178_F	0.919	1.00
45_L	220_R	0.919	1.00
35_E	229_S	0.916	1.00
87_P	91_L	0.914	1.00
61_I	202_G	0.912	1.00
226_L	363_I	0.909	1.00
389_Y	392_K	0.906	1.00
343_P	346_I	0.906	1.00
293_I	318_L	0.906	1.00
283_L	439_F	0.905	1.00
200_K	203_L	0.905	1.00
148_S	163_I	0.903	1.00
109_P	165_T	0.901	1.00
369_I	373_I	0.899	1.00
70_Y	76_S	0.898	1.00
281_L	325_F	0.897	1.00
259_T	263_Y	0.896	1.00
26_I	304_F	0.891	1.00
83_F	87_P	0.889	1.00
373_I	376_A	0.887	1.00
223_T	368_I	0.886	1.00
140_F	144_R	0.885	1.00
7_T	11_L	0.884	1.00
293_I	297_V	0.879	1.00
432_V	437_K	0.879	1.00
165_T	168_G	0.876	1.00
20_V	24_F	0.872	1.00
263_Y	266_L	0.857	1.00
34_P	307_Y	0.856	1.00
419_V	422_P	0.855	1.00
319_L	323_L	0.853	1.00
238_S	314_L	0.853	1.00
220_R	232_L	0.851	1.00
101_P	104_V	0.849	1.00
144_R	148_S	0.848	1.00
175_N	179_L	0.846	1.00
344_F	348_S	0.846	1.00
310_G	313_V	0.846	1.00
68_Y	265_A	0.846	1.00
290_I	294_P	0.844	1.00
345_L	349_L	0.843	1.00
91_L	95_L	0.842	1.00
100_F	104_V	0.839	1.00
8_L	12_S	0.838	1.00
142_I	146_G	0.837	1.00
358_T	377_I	0.837	1.00
237_F	240_L	0.836	1.00
83_F	198_H	0.836	1.00
82_K	86_F	0.835	1.00
9_K	13_V	0.835	1.00
233_G	237_F	0.835	1.00
70_Y	127_M	0.833	1.00
62_I	66_I	0.831	1.00
40_V	157_I	0.829	1.00
48_V	52_A	0.828	1.00
276_I	279_R	0.828	1.00
287_L	410_P	0.827	1.00
193_A	196_F	0.827	1.00
213_F	217_Q	0.826	1.00
64_R	341_L	0.826	1.00
125_V	133_T	0.825	1.00
417_V	421_P	0.825	1.00
287_L	413_A	0.824	1.00
358_T	361_L	0.823	1.00
71_A	266_L	0.821	1.00
410_P	413_A	0.821	1.00
28_T	160_F	0.821	1.00
98_L	102_N	0.819	1.00
419_V	423_Y	0.813	1.00
283_L	287_L	0.809	1.00
235_Y	317_L	0.806	1.00
255_V	258_P	0.806	1.00
320_A	375_Q	0.801	1.00
389_Y	393_E	0.799	1.00
6_N	255_V	0.799	1.00
75_I	194_F	0.798	1.00
240_L	244_V	0.797	1.00
5_K	131_T	0.796	1.00
26_I	29_A	0.793	1.00
221_V	225_Y	0.790	1.00
224_A	232_L	0.790	1.00
334_I	344_F	0.788	1.00
432_V	438_T	0.785	1.00
76_S	79_V	0.785	1.00
80_I	83_F	0.782	1.00
69_L	75_I	0.779	1.00
273_M	276_I	0.778	1.00
82_K	87_P	0.778	1.00
165_T	169_I	0.778	1.00
402_E	406_L	0.777	1.00
208_S	348_S	0.775	1.00
168_G	172_V	0.774	1.00
171_S	175_N	0.774	1.00
332_N	335_I	0.774	1.00
211_A	348_S	0.774	1.00
175_N	178_F	0.772	1.00
347_L	351_N	0.771	1.00
116_L	120_M	0.769	1.00
279_R	283_L	0.769	1.00
364_P	371_G	0.767	1.00
96_I	99_L	0.767	1.00
136_T	171_S	0.767	1.00
194_F	197_K	0.766	1.00
320_A	379_S	0.765	1.00
237_F	307_Y	0.762	1.00
25_F	29_A	0.762	1.00
215_S	352_G	0.761	1.00
82_K	195_L	0.760	1.00
249_L	253_G	0.758	1.00
34_P	230_Y	0.758	1.00
88_F	92_P	0.755	1.00
48_V	51_S	0.753	1.00
66_I	76_S	0.753	1.00
84_L	88_F	0.753	1.00
28_T	148_S	0.747	1.00
319_L	322_T	0.746	1.00
145_W	149_I	0.745	1.00
220_R	236_Q	0.745	1.00
27_I	149_I	0.745	1.00
200_K	204_P	0.743	1.00
336_A	339_K	0.740	1.00
217_Q	221_V	0.740	1.00
350_L	385_F	0.739	1.00
100_F	105_K	0.739	1.00
159_L	162_E	0.739	1.00
250_G	254_G	0.735	1.00
241_V	304_F	0.732	1.00
404_A	408_M	0.731	1.00
296_A	318_L	0.731	1.00
204_P	341_L	0.731	1.00
267_G	270_E	0.730	1.00
63_T	126_G	0.728	1.00
414_F	420_D	0.727	1.00
11_L	15_T	0.726	1.00
147_I	150_I	0.726	1.00
435_L	438_T	0.724	1.00
391_L	394_D	0.724	1.00
35_E	39_K	0.724	1.00
37_F	237_F	0.723	1.00
288_A	291_I	0.723	1.00
178_F	182_K	0.723	1.00
121_G	125_V	0.722	1.00
226_L	360_F	0.722	1.00
257_L	332_N	0.721	1.00
273_M	277_S	0.719	1.00
88_F	91_L	0.717	1.00
219_D	239_A	0.717	1.00
132_E	135_I	0.716	1.00
38_G	233_G	0.715	1.00
68_Y	197_K	0.715	1.00
144_R	163_I	0.714	1.00
289_V	318_L	0.712	1.00
4_I	8_L	0.710	1.00
408_M	411_L	0.709	1.00
210_S	214_L	0.708	1.00
201_E	205_L	0.708	1.00
16_T	142_I	0.706	1.00
356_L	360_F	0.706	1.00
97_L	100_F	0.705	1.00
32_T	36_F	0.705	1.00
3_P	7_T	0.704	1.00
385_F	389_Y	0.703	1.00
99_L	102_N	0.699	1.00
217_Q	243_G	0.699	1.00
69_L	74_E	0.697	1.00
33_N	307_Y	0.695	1.00
359_S	371_G	0.695	1.00
200_K	342_R	0.695	1.00
87_P	90_V	0.695	1.00
332_N	336_A	0.694	1.00
227_L	363_I	0.691	1.00
113_L	169_I	0.691	1.00
160_F	164_W	0.691	1.00
172_V	176_Y	0.689	1.00
42_I	45_L	0.685	1.00
97_L	105_K	0.684	1.00
380_T	384_S	0.682	1.00
205_L	341_L	0.681	1.00
195_L	199_F	0.677	1.00
376_A	380_T	0.674	1.00
63_T	67_S	0.669	1.00
12_S	16_T	0.667	1.00
57_I	202_G	0.663	1.00
140_F	171_S	0.663	1.00
407_F	410_P	0.662	1.00
242_A	245_P	0.661	1.00
47_E	51_S	0.661	1.00
37_F	233_G	0.660	1.00
327_I	383_S	0.659	1.00
124_M	179_L	0.659	1.00
26_I	303_F	0.658	1.00
277_S	329_S	0.655	1.00
324_P	328_G	0.655	1.00
8_L	15_T	0.654	1.00
330_L	390_A	0.654	1.00
187_L	190_F	0.652	1.00
334_I	390_A	0.651	1.00
416_E	420_D	0.649	1.00
89_L	92_P	0.648	1.00
330_L	383_S	0.648	1.00
240_L	243_G	0.648	1.00
281_L	329_S	0.645	1.00
269_D	337_A	0.645	1.00
16_T	20_V	0.644	1.00
76_S	80_I	0.641	1.00
436_F	439_F	0.638	1.00
119_V	122_S	0.637	1.00
211_A	215_S	0.635	1.00
117_N	172_V	0.635	1.00
17_N	21_A	0.634	1.00
385_F	388_V	0.634	1.00
235_Y	239_A	0.634	1.00
387_L	391_L	0.634	1.00
259_T	273_M	0.633	1.00
324_P	379_S	0.629	1.00
345_L	348_S	0.629	1.00
227_L	367_G	0.628	1.00
314_L	318_L	0.627	1.00
307_Y	310_G	0.626	1.00
149_I	152_V	0.625	1.00
290_I	293_I	0.625	1.00
32_T	157_I	0.622	1.00
233_G	236_Q	0.622	1.00
110_Y	114_Y	0.622	1.00
218_G	222_T	0.621	1.00
434_L	437_K	0.620	1.00
301_E	311_I	0.620	1.00
136_T	178_F	0.620	1.00
116_L	172_V	0.620	1.00
4_I	7_T	0.619	1.00
85_S	88_F	0.617	1.00
279_R	402_E	0.616	1.00
113_L	172_V	0.615	1.00
205_L	335_I	0.614	1.00
257_L	336_A	0.614	1.00
266_L	269_D	0.609	1.00
141_L	144_R	0.608	1.00
341_L	344_F	0.607	1.00
333_F	337_A	0.606	1.00
331_T	344_F	0.605	1.00
400_K	404_A	0.603	1.00
264_K	267_G	0.599	1.00
284_I	288_A	0.599	1.00
21_A	25_F	0.598	1.00
349_L	352_G	0.598	1.00
406_L	410_P	0.598	1.00
231_Y	234_L	0.597	1.00
40_V	161_I	0.594	1.00
46_L	50_T	0.591	1.00
82_K	85_S	0.589	1.00
28_T	32_T	0.588	1.00
297_V	308_I	0.588	1.00
298_L	302_K	0.587	1.00
208_S	212_T	0.586	1.00
240_L	304_F	0.585	1.00
115_L	119_V	0.583	1.00
252_L	256_L	0.582	1.00
331_T	335_I	0.582	1.00
28_T	37_F	0.582	1.00
343_P	347_L	0.581	1.00
197_K	201_E	0.579	1.00
362_L	370_G	0.579	1.00
354_L	357_L	0.576	1.00
350_L	353_G	0.575	1.00
10_S	130_F	0.575	1.00
337_A	393_E	0.575	1.00
212_T	216_S	0.574	1.00
147_I	166_L	0.573	1.00
86_F	195_L	0.573	1.00
158_Y	162_E	0.573	1.00
260_A	274_S	0.573	1.00
130_F	133_T	0.572	1.00
95_L	98_L	0.570	1.00
80_I	84_L	0.570	1.00
135_I	139_I	0.568	1.00
36_F	157_I	0.567	1.00
46_L	221_V	0.566	1.00
375_Q	379_S	0.565	1.00
18_V	247_M	0.564	1.00
16_T	19_I	0.563	1.00
432_V	439_F	0.562	1.00
42_I	220_R	0.562	1.00
109_P	113_L	0.561	1.00
209_S	213_F	0.560	1.00
276_I	280_V	0.556	1.00
13_V	138_N	0.556	1.00
70_Y	73_K	0.555	1.00
177_A	180_S	0.554	1.00
372_A	376_A	0.551	1.00
42_I	225_Y	0.551	1.00
261_S	265_A	0.551	1.00
354_L	378_V	0.550	1.00
81_G	188_P	0.549	1.00
97_L	103_Y	0.548	1.00
35_E	230_Y	0.548	1.00
121_G	137_G	0.547	1.00
96_I	103_Y	0.546	1.00
282_S	322_T	0.544	1.00
20_V	23_I	0.543	1.00
379_S	383_S	0.543	1.00
318_L	321_T	0.541	1.00
42_I	221_V	0.541	1.00
122_S	126_G	0.541	1.00
49_V	213_F	0.540	1.00
18_V	21_A	0.540	1.00
31_I	151_A	0.540	1.00
10_S	14_T	0.538	1.00
434_L	438_T	0.538	1.00
294_P	297_V	0.538	1.00
125_V	130_F	0.537	1.00
379_S	382_S	0.536	1.00
286_F	322_T	0.536	1.00
316_L	319_L	0.536	1.00
193_A	197_K	0.536	1.00
168_G	171_S	0.535	1.00
288_A	292_S	0.534	1.00
25_F	37_F	0.533	1.00
226_L	364_P	0.532	1.00
351_N	378_V	0.530	1.00
114_Y	168_G	0.530	1.00
99_L	104_V	0.527	1.00
408_M	412_I	0.527	1.00
312_K	316_L	0.527	1.00
347_L	350_L	0.526	1.00
64_R	336_A	0.525	1.00
78_S	194_F	0.525	1.00
75_I	79_V	0.525	1.00
91_L	94_F	0.524	1.00
383_S	387_L	0.524	1.00
248_V	251_A	0.523	1.00
405_I	409_M	0.522	1.00
220_R	239_A	0.522	1.00
141_L	145_W	0.522	1.00
285_T	322_T	0.522	1.00
323_L	376_A	0.522	1.00
157_I	161_I	0.522	1.00
44_Q	164_W	0.521	1.00
287_L	291_I	0.521	1.00
172_V	175_N	0.520	1.00
208_S	345_L	0.520	1.00
322_T	325_F	0.519	1.00
290_I	414_F	0.519	1.00
409_M	412_I	0.519	1.00
208_S	211_A	0.518	1.00
110_Y	168_G	0.516	1.00
214_L	218_G	0.516	1.00
406_L	409_M	0.515	1.00
29_A	307_Y	0.515	1.00
98_L	103_Y	0.514	1.00
231_Y	309_S	0.513	1.00
301_E	306_A	0.513	1.00
237_F	310_G	0.512	1.00
281_L	285_T	0.512	1.00
280_V	284_I	0.511	1.00
109_P	114_Y	0.510	1.00
97_L	101_P	0.510	1.00
375_Q	378_V	0.506	1.00
171_S	174_M	0.505	1.00
251_A	254_G	0.504	0.99
397_V	401_R	0.504	0.99
390_A	393_E	0.502	0.99
67_S	261_S	0.502	0.99
45_L	49_V	0.501	0.99
413_A	416_E	0.500	0.99
89_L	93_L	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4humA	1	0.8614	100	0.431	Contact Map
4lz6A	1	0.8486	100	0.431	Contact Map
3w4tA	1	0.8401	100	0.432	Contact Map
3mktA	1	0.855	100	0.438	Contact Map
1pw4A	1	0.7655	25.3	0.95	Contact Map
3wdoA	1	0.8102	15.9	0.955	Contact Map
4n7wA	2	0.3987	14.6	0.955	Contact Map
3zuxA	1	0.3838	11.1	0.958	Contact Map
2cfqA	1	0.4222	8.8	0.96	Contact Map
2gfpA	2	0.7441	8.5	0.96	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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