Q97XM0 - SULSO - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

Q97XM0 - Amino acid transporter related protein

UniProt:	Q97XM0	Sequences: MEKMGKETEKNTQQGLAKGVVGYREVLAQGIASGAPAAATIGTLTGAAAFAYGALPLAVAIALIMVLLDATRLSIIARYVQSAGGIYAFIERGLGKKVAFVASMAYTIYIFAVIIFVYLIMGLMVPTGIEELGINLPSWIWIPLGLVNAIVSVIISYLGIRPSLKFTLIMSIAEITGIIATSILIFSKIPPDINTFTLAYVPPPKISNLGLGVSFGILAFTGYETVSVLGEEAKDPRNNIAKGVFTAALLLGITYIVGSEAFTVGWGVNNMSTYFNYLAPGLILAKTFGGTILLIILTALLINSNLACATGFTNCVTRVMYAMSVDKLLPSKLSSIHPKRRTPHIASLFTFIFTALYFIIMSLIFSPSNIFIATGITTTFGFLIAIFVVNISMLIVVKKNNALNIGNILIVAIVEAIIGYVFYATVITSAINVPVLIGVLTLVLWVVGGIIYLTLKRFFTQK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	462 (421)
Sequences:	24933 (16227)
Seq/√Len:	790.8

ECOLI - PUUP FRLA POTE PLAP ANSP AROP PHEP PROY YIFK GABP LYSP CYCA MMUP ADIC YBAT GADC YCAM YGJI YJEM CADB ARCD YJEH TNAB MTR
BACSU - YHDG YFNA AAPA YDGF ASPP YVBW YBGF YTNA YBXG STET GABP YBEC HUTM ROCC ROCE YCGH ARCD YECA YDAO GERBB GERAB YNDE GERKB YFKT
HALSA - Q9HHU7 Q9HQB3 Q9HSL5
SULSO - Q97XM0 Q7LXI7 Q97U05 Q97ZB5 Q97VA6 Q97VA8 Q97WS3 Q97Z63 Q97U33 Q97X49 Q97WD4 Q97VR4 Q97YN3 Q97Y76 Q97YX9 Q97U39

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
153_V	351_F	4.468	1.00
332_K	345_I	4.348	1.00
395_I	399_K	3.312	1.00
63_L	252_G	3.140	1.00
335_S	345_I	3.116	1.00
238_N	242_K	2.942	1.00
337_H	340_R	2.925	1.00
22_G	234_K	2.895	1.00
233_A	239_N	2.665	1.00
87_Y	326_D	2.662	1.00
235_D	238_N	2.631	1.00
103_S	323_M	2.622	1.00
185_I	261_A	2.586	1.00
337_H	344_H	2.526	1.00
332_K	335_S	2.517	1.00
324_S	334_S	2.517	1.00
146_L	355_A	2.503	1.00
27_L	246_T	2.409	1.00
292_I	296_I	2.371	1.00
183_I	187_S	2.369	1.00
23_Y	246_T	2.351	1.00
75_I	397_V	2.268	1.00
231_E	325_V	2.252	1.00
91_E	99_A	2.226	1.00
387_F	419_G	2.220	1.00
23_Y	239_N	2.106	1.00
153_V	347_S	2.089	1.00
416_A	420_Y	2.069	1.00
348_L	352_I	2.068	1.00
444_L	448_G	2.062	1.00
154_I	158_L	2.058	1.00
150_I	355_A	2.055	1.00
157_Y	344_H	2.045	1.00
232_E	318_R	2.042	1.00
23_Y	27_L	2.024	1.00
283_I	286_K	2.023	1.00
26_V	233_A	2.004	1.00
161_R	165_K	2.001	1.00
321_Y	325_V	2.000	1.00
242_K	246_T	1.973	1.00
270_N	287_T	1.971	1.00
145_G	358_F	1.961	1.00
172_I	176_T	1.943	1.00
146_L	358_F	1.934	1.00
72_R	390_N	1.925	1.00
94_L	395_I	1.924	1.00
406_G	409_L	1.876	1.00
16_L	336_I	1.875	1.00
22_G	25_E	1.872	1.00
64_I	68_L	1.857	1.00
91_E	96_K	1.845	1.00
107_T	350_T	1.845	1.00
442_L	446_V	1.836	1.00
327_K	331_S	1.835	1.00
94_L	391_I	1.830	1.00
411_V	415_E	1.827	1.00
95_G	98_V	1.811	1.00
333_L	349_F	1.786	1.00
267_G	270_N	1.737	1.00
418_I	422_F	1.735	1.00
412_A	416_A	1.734	1.00
194_N	199_A	1.723	1.00
150_I	351_F	1.718	1.00
235_D	239_N	1.712	1.00
283_I	287_T	1.697	1.00
90_I	102_A	1.695	1.00
435_V	438_G	1.692	1.00
25_E	168_L	1.691	1.00
47_A	55_L	1.674	1.00
337_H	342_T	1.637	1.00
156_S	310_T	1.625	1.00
245_F	249_L	1.616	1.00
137_P	140_I	1.611	1.00
390_N	418_I	1.603	1.00
114_I	354_T	1.602	1.00
157_Y	348_L	1.598	1.00
118_Y	309_A	1.587	1.00
102_A	388_V	1.579	1.00
197_T	200_Y	1.569	1.00
30_G	247_A	1.567	1.00
340_R	344_H	1.560	1.00
58_A	212_G	1.556	1.00
21_V	25_E	1.553	1.00
176_T	180_A	1.553	1.00
424_A	428_T	1.546	1.00
420_Y	424_A	1.543	1.00
149_A	354_T	1.539	1.00
27_L	250_L	1.538	1.00
395_I	398_K	1.537	1.00
415_E	418_I	1.527	1.00
448_G	451_I	1.523	1.00
413_I	417_I	1.517	1.00
449_G	453_L	1.510	1.00
195_T	198_L	1.490	1.00
249_L	253_I	1.488	1.00
401_N	404_N	1.486	1.00
414_V	418_I	1.484	1.00
158_L	340_R	1.480	1.00
286_K	294_L	1.480	1.00
121_M	148_N	1.462	1.00
194_N	198_L	1.460	1.00
177_G	300_L	1.456	1.00
104_M	448_G	1.453	1.00
125_V	144_L	1.440	1.00
229_L	314_N	1.436	1.00
450_I	454_T	1.434	1.00
320_M	346_A	1.433	1.00
345_I	349_F	1.429	1.00
54_A	209_L	1.427	1.00
316_V	350_T	1.414	1.00
331_S	335_S	1.412	1.00
235_D	242_K	1.410	1.00
432_N	435_V	1.407	1.00
118_Y	149_A	1.396	1.00
197_T	202_P	1.394	1.00
90_I	388_V	1.394	1.00
391_I	395_I	1.393	1.00
153_V	348_L	1.393	1.00
331_S	334_S	1.389	1.00
413_I	416_A	1.387	1.00
70_A	248_A	1.383	1.00
286_K	291_T	1.380	1.00
321_Y	336_I	1.368	1.00
193_I	197_T	1.357	1.00
18_K	341_R	1.355	1.00
199_A	202_P	1.353	1.00
149_A	351_F	1.349	1.00
186_F	261_A	1.344	1.00
451_I	455_L	1.342	1.00
140_I	143_P	1.341	1.00
194_N	197_T	1.341	1.00
97_K	452_Y	1.340	1.00
295_I	299_A	1.340	1.00
335_S	344_H	1.339	1.00
415_E	419_G	1.335	1.00
422_F	425_T	1.334	1.00
146_L	150_I	1.332	1.00
411_V	414_V	1.331	1.00
410_I	414_V	1.330	1.00
80_V	92_R	1.321	1.00
277_Y	283_I	1.321	1.00
198_L	201_V	1.319	1.00
175_I	179_I	1.316	1.00
317_T	347_S	1.316	1.00
121_M	302_I	1.309	1.00
62_A	216_G	1.294	1.00
182_S	257_V	1.280	1.00
436_L	439_V	1.278	1.00
70_A	244_V	1.277	1.00
69_D	390_N	1.276	1.00
16_L	321_Y	1.274	1.00
239_N	242_K	1.272	1.00
443_V	446_V	1.266	1.00
25_E	164_L	1.263	1.00
21_V	164_L	1.252	1.00
94_L	98_V	1.250	1.00
195_T	200_Y	1.245	1.00
64_I	417_I	1.242	1.00
23_Y	242_K	1.239	1.00
435_V	439_V	1.236	1.00
236_P	241_A	1.233	1.00
412_A	415_E	1.219	1.00
415_E	422_F	1.219	1.00
21_V	26_V	1.218	1.00
34_G	251_L	1.214	1.00
93_G	392_S	1.210	1.00
253_I	257_V	1.210	1.00
83_A	231_E	1.207	1.00
434_P	437_I	1.205	1.00
117_V	308_C	1.200	1.00
196_F	199_A	1.191	1.00
107_T	320_M	1.190	1.00
423_Y	427_I	1.187	1.00
71_T	245_F	1.187	1.00
88_A	92_R	1.187	1.00
56_P	260_E	1.186	1.00
139_W	143_P	1.184	1.00
189_I	264_V	1.183	1.00
320_M	329_L	1.182	1.00
418_I	421_V	1.166	1.00
443_V	447_V	1.165	1.00
419_G	422_F	1.157	1.00
152_S	309_A	1.156	1.00
181_T	185_I	1.150	1.00
26_V	243_G	1.145	1.00
439_V	443_V	1.143	1.00
30_G	226_V	1.138	1.00
24_R	28_A	1.127	1.00
289_G	293_L	1.117	1.00
433_V	436_L	1.112	1.00
180_A	184_L	1.110	1.00
268_V	271_M	1.107	1.00
345_I	348_L	1.106	1.00
419_G	423_Y	1.103	1.00
411_V	416_A	1.103	1.00
234_K	239_N	1.102	1.00
142_I	146_L	1.099	1.00
31_I	250_L	1.099	1.00
139_W	142_I	1.098	1.00
433_V	437_I	1.092	1.00
434_P	438_G	1.091	1.00
416_A	419_G	1.091	1.00
77_A	89_F	1.087	1.00
155_I	166_F	1.083	1.00
185_I	265_G	1.082	1.00
65_M	421_V	1.080	1.00
73_L	86_I	1.079	1.00
147_V	151_V	1.078	1.00
195_T	199_A	1.070	1.00
82_S	88_A	1.063	1.00
325_V	334_S	1.062	1.00
194_N	200_Y	1.058	1.00
153_V	157_Y	1.056	1.00
432_N	436_L	1.053	1.00
279_A	283_I	1.046	1.00
440_L	443_V	1.037	1.00
433_V	438_G	1.036	1.00
446_V	450_I	1.035	1.00
336_I	341_R	1.033	1.00
187_S	192_D	1.032	1.00
165_K	169_I	1.032	1.00
166_F	170_M	1.030	1.00
29_Q	229_L	1.027	1.00
413_I	419_G	1.026	1.00
197_T	201_V	1.024	1.00
54_A	202_P	1.015	1.00
75_I	78_R	1.014	1.00
352_I	356_L	1.012	1.00
167_T	310_T	1.003	1.00
20_V	234_K	1.002	1.00
82_S	92_R	0.999	1.00
92_R	400_N	0.996	1.00
413_I	418_I	0.994	1.00
97_K	449_G	0.992	1.00
87_Y	322_A	0.979	1.00
35_A	38_A	0.979	1.00
100_F	104_M	0.977	1.00
186_F	190_P	0.973	1.00
41_I	44_L	0.969	1.00
445_W	449_G	0.966	1.00
72_R	415_E	0.965	1.00
408_I	411_V	0.961	1.00
438_G	442_L	0.959	1.00
415_E	421_V	0.955	1.00
60_A	256_I	0.952	1.00
150_I	154_I	0.947	1.00
398_K	401_N	0.947	1.00
436_L	440_L	0.946	1.00
79_Y	404_N	0.944	1.00
170_M	307_A	0.943	1.00
425_T	428_T	0.943	1.00
160_I	314_N	0.940	1.00
122_G	144_L	0.938	1.00
221_T	382_F	0.937	1.00
125_V	302_I	0.930	1.00
179_I	183_I	0.924	1.00
28_A	168_L	0.924	1.00
405_I	409_L	0.917	1.00
387_F	423_Y	0.915	1.00
411_V	418_I	0.908	1.00
424_A	427_I	0.908	1.00
196_F	200_Y	0.907	1.00
68_L	417_I	0.906	1.00
410_I	415_E	0.906	1.00
143_P	147_V	0.904	1.00
410_I	413_I	0.903	1.00
152_S	310_T	0.902	1.00
31_I	251_L	0.901	1.00
391_I	419_G	0.901	1.00
78_R	405_I	0.895	1.00
90_I	98_V	0.890	1.00
440_L	444_L	0.890	1.00
125_V	129_I	0.889	1.00
230_G	240_I	0.887	1.00
151_V	306_L	0.887	1.00
394_L	416_A	0.887	1.00
84_G	87_Y	0.886	1.00
267_G	287_T	0.876	1.00
56_P	263_T	0.874	1.00
175_I	254_T	0.874	1.00
116_F	218_L	0.871	1.00
91_E	326_D	0.867	1.00
157_Y	337_H	0.864	1.00
224_E	228_V	0.862	1.00
157_Y	342_T	0.861	1.00
442_L	445_W	0.860	1.00
116_F	375_G	0.858	1.00
20_V	161_R	0.858	1.00
122_G	145_G	0.856	1.00
211_L	215_F	0.856	1.00
265_G	284_L	0.855	1.00
187_S	191_P	0.853	1.00
104_M	329_L	0.853	1.00
252_G	256_I	0.848	1.00
63_L	220_F	0.847	1.00
203_P	206_I	0.846	1.00
408_I	415_E	0.845	1.00
182_S	261_A	0.844	1.00
313_T	351_F	0.844	1.00
441_T	444_L	0.843	1.00
246_T	250_L	0.841	1.00
35_A	174_E	0.837	1.00
448_G	452_Y	0.836	1.00
387_F	391_I	0.836	1.00
437_I	444_L	0.835	1.00
181_T	285_A	0.831	1.00
84_G	88_A	0.830	1.00
25_E	165_K	0.827	1.00
333_L	345_I	0.821	1.00
432_N	438_G	0.820	1.00
418_I	424_A	0.816	1.00
270_N	273_T	0.811	1.00
451_I	454_T	0.808	1.00
422_F	426_V	0.806	1.00
411_V	419_G	0.805	1.00
329_L	333_L	0.798	1.00
165_K	168_L	0.796	1.00
403_L	406_G	0.794	1.00
344_H	348_L	0.793	1.00
44_L	47_A	0.792	1.00
260_E	264_V	0.792	1.00
122_G	141_W	0.790	1.00
182_S	186_F	0.790	1.00
412_A	418_I	0.788	1.00
377_T	381_G	0.788	1.00
439_V	442_L	0.788	1.00
16_L	232_E	0.786	1.00
438_G	441_T	0.786	1.00
408_I	412_A	0.785	1.00
60_A	64_I	0.784	1.00
174_E	304_S	0.783	1.00
225_T	315_C	0.782	1.00
67_L	71_T	0.778	1.00
205_K	208_N	0.778	1.00
57_L	209_L	0.776	1.00
121_M	306_L	0.773	1.00
53_G	263_T	0.772	1.00
121_M	305_N	0.769	1.00
189_I	192_D	0.767	1.00
380_F	441_T	0.766	1.00
90_I	392_S	0.764	1.00
67_L	245_F	0.762	1.00
438_G	444_L	0.759	1.00
419_G	428_T	0.759	1.00
413_I	420_Y	0.756	1.00
154_I	157_Y	0.756	1.00
419_G	426_V	0.755	1.00
416_A	424_A	0.752	1.00
351_F	355_A	0.752	1.00
24_R	168_L	0.748	1.00
277_Y	280_P	0.747	1.00
394_L	398_K	0.746	1.00
420_Y	423_Y	0.745	1.00
76_I	393_M	0.745	1.00
95_G	453_L	0.741	1.00
291_T	295_I	0.739	1.00
409_L	413_I	0.735	1.00
406_G	412_A	0.734	1.00
439_V	444_L	0.733	1.00
444_L	451_I	0.732	1.00
392_S	396_V	0.729	1.00
144_L	147_V	0.729	1.00
189_I	261_A	0.724	1.00
444_L	447_V	0.724	1.00
206_I	210_G	0.724	1.00
187_S	190_P	0.723	1.00
111_F	353_F	0.723	1.00
152_S	313_T	0.723	1.00
42_G	120_I	0.720	1.00
397_V	401_N	0.719	1.00
40_T	43_T	0.717	1.00
439_V	453_L	0.717	1.00
142_I	358_F	0.715	1.00
450_I	453_L	0.715	1.00
332_K	349_F	0.715	1.00
421_V	428_T	0.713	1.00
158_L	162_P	0.713	1.00
98_V	388_V	0.712	1.00
16_L	318_R	0.709	1.00
186_F	257_V	0.708	1.00
182_S	258_G	0.707	1.00
56_P	60_A	0.707	1.00
97_K	101_V	0.702	1.00
149_A	358_F	0.702	1.00
76_I	89_F	0.702	1.00
352_I	355_A	0.699	1.00
20_V	160_I	0.698	1.00
48_A	55_L	0.697	1.00
68_L	72_R	0.693	1.00
34_G	247_A	0.692	1.00
448_G	455_L	0.692	1.00
337_H	341_R	0.692	1.00
119_L	374_T	0.691	1.00
27_L	243_G	0.685	1.00
47_A	51_A	0.684	1.00
221_T	386_I	0.683	1.00
317_T	346_A	0.681	1.00
235_D	241_A	0.681	1.00
449_G	452_Y	0.679	1.00
136_L	139_W	0.677	1.00
156_S	347_S	0.675	1.00
444_L	452_Y	0.673	1.00
442_L	448_G	0.672	1.00
24_R	165_K	0.672	1.00
415_E	427_I	0.670	1.00
32_A	171_S	0.669	1.00
106_Y	110_I	0.668	1.00
445_W	448_G	0.668	1.00
73_L	389_V	0.663	1.00
405_I	411_V	0.662	1.00
36_P	255_Y	0.660	1.00
432_N	437_I	0.660	1.00
413_I	421_V	0.660	1.00
115_I	374_T	0.659	1.00
23_Y	243_G	0.658	1.00
146_L	359_I	0.657	1.00
206_I	209_L	0.657	1.00
241_A	244_V	0.656	1.00
113_V	378_T	0.655	1.00
57_L	61_I	0.655	1.00
195_T	201_V	0.655	1.00
33_S	311_G	0.654	1.00
27_L	30_G	0.654	1.00
246_T	249_L	0.653	1.00
421_V	424_A	0.651	1.00
446_V	449_G	0.650	1.00
439_V	449_G	0.650	1.00
93_G	395_I	0.650	1.00
164_L	168_L	0.650	1.00
20_V	24_R	0.650	1.00
290_G	293_L	0.649	1.00
452_Y	455_L	0.647	1.00
162_P	165_K	0.647	1.00
447_V	451_I	0.647	1.00
94_L	392_S	0.646	1.00
157_Y	347_S	0.646	1.00
57_L	60_A	0.645	1.00
87_Y	103_S	0.643	1.00
269_N	273_T	0.641	1.00
393_M	397_V	0.641	1.00
370_I	373_A	0.641	1.00
324_S	333_L	0.641	1.00
46_G	50_F	0.639	1.00
419_G	427_I	0.638	1.00
184_L	188_K	0.637	1.00
156_S	314_N	0.637	1.00
109_Y	382_F	0.636	1.00
418_I	428_T	0.636	1.00
194_N	202_P	0.635	1.00
87_Y	91_E	0.635	1.00
112_A	377_T	0.629	1.00
257_V	261_A	0.627	1.00
55_L	259_S	0.626	1.00
115_I	357_Y	0.626	1.00
441_T	449_G	0.625	1.00
292_I	295_I	0.625	1.00
15_G	18_K	0.625	1.00
110_I	312_F	0.624	1.00
442_L	449_G	0.623	1.00
418_I	425_T	0.622	1.00
313_T	317_T	0.622	1.00
157_Y	340_R	0.620	1.00
320_M	349_F	0.619	1.00
66_V	223_Y	0.618	1.00
402_A	405_I	0.618	1.00
416_A	427_I	0.617	1.00
124_M	301_L	0.617	1.00
250_L	254_T	0.615	1.00
435_V	444_L	0.613	1.00
93_G	396_V	0.612	1.00
68_L	414_V	0.612	1.00
421_V	425_T	0.611	1.00
412_A	419_G	0.611	1.00
419_G	425_T	0.610	1.00
31_I	35_A	0.610	1.00
195_T	202_P	0.609	1.00
333_L	346_A	0.605	1.00
105_A	385_A	0.604	1.00
413_I	427_I	0.601	1.00
435_V	442_L	0.600	1.00
148_N	309_A	0.600	1.00
184_L	289_G	0.600	1.00
87_Y	99_A	0.599	1.00
128_G	299_A	0.598	1.00
435_V	441_T	0.598	1.00
418_I	423_Y	0.597	1.00
150_I	153_V	0.597	1.00
393_M	415_E	0.595	1.00
406_G	411_V	0.594	1.00
280_P	285_A	0.594	1.00
227_S	244_V	0.593	1.00
152_S	306_L	0.593	1.00
77_A	240_I	0.593	1.00
126_P	141_W	0.592	1.00
419_G	424_A	0.592	1.00
414_V	422_F	0.591	1.00
439_V	448_G	0.591	1.00
125_V	148_N	0.590	1.00
415_E	428_T	0.587	1.00
258_G	281_G	0.587	1.00
438_G	445_W	0.585	1.00
416_A	421_V	0.585	1.00
111_F	350_T	0.583	1.00
412_A	427_I	0.583	1.00
193_I	196_F	0.583	1.00
83_A	321_Y	0.582	1.00
421_V	427_I	0.581	1.00
221_T	224_E	0.581	1.00
415_E	420_Y	0.580	1.00
408_I	414_V	0.579	1.00
279_A	282_L	0.578	1.00
117_V	309_A	0.578	1.00
436_L	443_V	0.578	1.00
77_A	227_S	0.577	1.00
438_G	452_Y	0.574	1.00
142_I	145_G	0.574	1.00
381_G	385_A	0.574	1.00
168_L	172_I	0.573	1.00
35_A	254_T	0.573	1.00
415_E	424_A	0.573	1.00
285_A	288_F	0.572	1.00
240_I	244_V	0.572	1.00
159_G	162_P	0.570	1.00
443_V	450_I	0.569	1.00
173_A	177_G	0.568	1.00
434_P	439_V	0.568	1.00
31_I	34_G	0.566	1.00
33_S	312_F	0.566	1.00
394_L	419_G	0.566	1.00
411_V	422_F	0.565	1.00
415_E	425_T	0.565	1.00
411_V	426_V	0.564	1.00
86_I	224_E	0.563	1.00
299_A	303_N	0.563	1.00
318_R	321_Y	0.562	1.00
33_S	36_P	0.561	1.00
442_L	453_L	0.560	1.00
413_I	422_F	0.560	1.00
59_V	219_A	0.559	1.00
316_V	320_M	0.559	1.00
44_L	259_S	0.556	1.00
418_I	427_I	0.556	1.00
173_A	300_L	0.555	1.00
37_A	117_V	0.555	1.00
441_T	445_W	0.555	1.00
122_G	125_V	0.554	1.00
148_N	306_L	0.554	1.00
339_K	344_H	0.553	1.00
74_S	78_R	0.553	1.00
437_I	445_W	0.553	1.00
410_I	418_I	0.552	1.00
110_I	315_C	0.552	1.00
45_T	48_A	0.552	1.00
414_V	428_T	0.552	1.00
153_V	313_T	0.551	1.00
258_G	262_F	0.551	1.00
436_L	442_L	0.550	1.00
90_I	99_A	0.550	1.00
304_S	307_A	0.548	1.00
285_A	293_L	0.548	1.00
198_L	264_V	0.548	1.00
343_P	346_A	0.546	1.00
233_A	240_I	0.546	1.00
372_I	375_G	0.546	1.00
417_I	421_V	0.545	1.00
56_P	256_I	0.545	1.00
416_A	428_T	0.544	1.00
149_A	355_A	0.543	1.00
61_I	213_V	0.543	1.00
416_A	422_F	0.543	1.00
356_L	359_I	0.540	1.00
444_L	449_G	0.539	1.00
76_I	93_G	0.539	1.00
137_P	141_W	0.539	1.00
70_A	223_Y	0.539	1.00
31_I	171_S	0.537	1.00
406_G	419_G	0.537	1.00
231_E	321_Y	0.537	1.00
109_Y	381_G	0.536	1.00
412_A	426_V	0.536	1.00
438_G	448_G	0.536	1.00
188_K	191_P	0.535	1.00
62_A	217_I	0.535	1.00
162_P	166_F	0.535	1.00
24_R	27_L	0.535	1.00
228_V	315_C	0.534	1.00
177_G	296_I	0.534	1.00
79_Y	400_N	0.533	1.00
163_S	314_N	0.532	1.00
94_L	99_A	0.529	1.00
436_L	445_W	0.529	1.00
236_P	239_N	0.529	1.00
164_L	310_T	0.529	1.00
75_I	406_G	0.529	1.00
33_S	225_T	0.529	1.00
151_V	155_I	0.527	1.00
190_P	195_T	0.524	1.00
261_A	264_V	0.523	1.00
127_T	298_T	0.521	1.00
409_L	412_A	0.520	1.00
105_A	384_I	0.520	1.00
441_T	446_V	0.519	1.00
127_T	130_E	0.519	1.00
410_I	416_A	0.517	1.00
194_N	264_V	0.517	1.00
438_G	453_L	0.517	1.00
128_G	298_T	0.517	1.00
411_V	428_T	0.515	1.00
344_H	347_S	0.515	1.00
53_G	268_V	0.514	1.00
371_F	375_G	0.514	1.00
268_V	272_S	0.514	1.00
266_W	283_I	0.514	1.00
113_V	116_F	0.514	1.00
281_G	285_A	0.513	1.00
444_L	450_I	0.512	1.00
86_I	228_V	0.511	1.00
232_E	343_P	0.511	1.00
97_K	453_L	0.507	1.00
204_P	208_N	0.507	1.00
355_A	358_F	0.506	1.00
59_V	255_Y	0.505	1.00
38_A	174_E	0.505	1.00
250_L	257_V	0.505	1.00
441_T	452_Y	0.504	1.00
238_N	241_A	0.503	1.00
150_I	348_L	0.501	1.00
210_G	424_A	0.501	1.00
46_G	49_A	0.501	1.00
349_F	353_F	0.501	1.00
285_A	289_G	0.500	1.00
70_A	74_S	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3l1lA	2	0.9026	100	0.274	Contact Map
3giaA	1	0.9156	100	0.332	Contact Map
4djkA	2	0.9091	100	0.338	Contact Map
3dh4A	3	0.8939	99.1	0.842	Contact Map
2xq2A	2	0.8918	99	0.85	Contact Map
2jlnA	1	0.8853	98.9	0.853	Contact Map
4wgvA	2	0.7987	98	0.889	Contact Map
2a65A	2	0.9199	97.5	0.901	Contact Map
4us3A	1	0.8615	97.1	0.907	Contact Map
4xp4A	1	0.9264	96.9	0.91	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0134 seconds.