Q97X78 - SULSO - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

Q97X78 - Uncharacterized protein

UniProt:	Q97X78	Sequences: MDIIDKRILFYLLKDGRISQRRIASLLNLTPASLNYRFKKLTDSGILKGFKLYVNPNFFGKYQIFIAFKNYSDIDADWISFKLKCLEWLNVYGIYASDNTELKDKISYMTKNLGDPVLSYFPVQSLFRASNLDQKIVEILKIDPRLSSSEISKKINVNSRIIEKHIRYLRHRGLILVAPQIDLGKTDIIIFSIFSKNIDEISVVLQECKLWQFTDGYAGITVCYADNMERARKYIDLARQIDNTADVMIIYDYMFQ	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	256 (245)
Sequences:	535 (435)
Seq/√Len:	27.8

SULSO - Q97X78 Q97VN7 Q980P3

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
199_D	203_V	4.737	1.00
4_I	29_L	4.649	1.00
136_I	151_I	3.809	1.00
197_N	200_E	3.532	1.00
111_K	115_D	3.036	1.00
202_S	212_Q	2.909	1.00
15_D	22_R	2.720	1.00
155_I	162_I	2.694	1.00
226_D	230_R	2.656	0.99
227_N	230_R	2.626	0.99
115_D	121_F	2.598	0.99
69_K	117_V	2.593	0.99
11_Y	18_I	2.501	0.99
112_N	115_D	2.324	0.99
15_D	170_R	2.275	0.98
188_I	226_D	2.188	0.98
133_D	165_H	2.188	0.98
110_T	115_D	2.157	0.98
27_L	34_L	2.100	0.97
115_D	120_Y	2.041	0.97
137_V	175_I	2.024	0.97
8_I	132_L	2.015	0.96
112_N	123_V	1.970	0.96
8_I	23_I	1.934	0.95
136_I	155_I	1.902	0.95
52_L	175_I	1.887	0.95
18_I	23_I	1.865	0.94
9_L	78_W	1.848	0.94
12_L	17_R	1.784	0.93
9_L	104_D	1.775	0.93
157_V	162_I	1.767	0.93
16_G	177_V	1.766	0.93
59_F	98_D	1.759	0.92
112_N	120_Y	1.752	0.92
180_Q	221_T	1.743	0.92
139_I	154_K	1.741	0.92
115_D	123_V	1.739	0.92
162_I	175_I	1.725	0.92
51_K	238_A	1.724	0.92
110_T	116_P	1.717	0.92
4_I	34_L	1.699	0.91
85_C	90_N	1.695	0.91
110_T	121_F	1.693	0.91
123_V	126_L	1.674	0.90
20_Q	38_F	1.664	0.90
29_L	33_S	1.652	0.90
21_R	185_K	1.613	0.89
230_R	233_K	1.610	0.89
8_I	160_R	1.608	0.89
79_I	187_D	1.602	0.88
208_C	234_Y	1.549	0.87
201_I	244_T	1.547	0.87
50_F	68_F	1.542	0.86
5_D	37_R	1.524	0.86
142_I	154_K	1.517	0.85
17_R	145_R	1.497	0.85
166_I	226_D	1.476	0.84
82_K	183_L	1.459	0.83
81_F	90_N	1.459	0.83
213_F	217_Y	1.447	0.83
26_L	50_F	1.446	0.83
16_G	144_P	1.406	0.81
2_D	5_D	1.373	0.79
24_A	220_I	1.365	0.79
146_L	154_K	1.363	0.79
131_N	134_Q	1.344	0.78
84_K	91_V	1.324	0.76
139_I	142_I	1.318	0.76
29_L	32_A	1.300	0.75
36_Y	212_Q	1.300	0.75
169_L	215_D	1.298	0.75
112_N	121_F	1.298	0.75
157_V	161_I	1.292	0.75
2_D	37_R	1.273	0.74
10_F	19_S	1.271	0.73
144_P	215_D	1.266	0.73
81_F	85_C	1.255	0.72
34_L	230_R	1.250	0.72
38_F	180_Q	1.244	0.72
8_I	41_L	1.228	0.71
177_V	214_T	1.222	0.70
184_G	238_A	1.208	0.70
11_Y	26_L	1.203	0.69
233_K	236_D	1.200	0.69
81_F	92_Y	1.195	0.69
137_V	149_S	1.193	0.69
80_S	89_L	1.192	0.68
57_N	229_E	1.190	0.68
114_G	177_V	1.174	0.67
93_G	102_L	1.169	0.67
80_S	85_C	1.141	0.65
8_I	170_R	1.134	0.65
97_S	134_Q	1.120	0.64
128_R	172_R	1.120	0.64
23_I	205_L	1.117	0.63
31_P	244_T	1.115	0.63
194_F	221_T	1.112	0.63
201_I	242_D	1.092	0.62
8_I	161_I	1.090	0.61
51_K	183_L	1.086	0.61
17_R	144_P	1.086	0.61
79_I	206_Q	1.086	0.61
86_L	92_Y	1.083	0.61
15_D	24_A	1.081	0.61
50_F	144_P	1.064	0.60
19_S	57_N	1.057	0.59
8_I	197_N	1.054	0.59
86_L	248_M	1.050	0.58
152_S	219_G	1.049	0.58
60_G	106_I	1.049	0.58
39_K	201_I	1.039	0.58
79_I	195_S	1.034	0.57
58_F	239_R	1.024	0.57
111_K	117_V	1.023	0.56
85_C	92_Y	1.023	0.56
16_G	145_R	1.023	0.56
130_S	157_V	1.020	0.56
131_N	229_E	1.011	0.56
21_R	31_P	1.007	0.55
100_T	104_D	1.003	0.55
183_L	191_F	1.002	0.55
33_S	86_L	0.999	0.55
45_G	117_V	0.997	0.55
161_I	164_K	0.996	0.54
236_D	239_R	0.993	0.54
57_N	205_L	0.989	0.54
87_E	92_Y	0.985	0.54
16_G	158_N	0.972	0.53
31_P	163_E	0.965	0.52
52_L	137_V	0.963	0.52
78_W	227_N	0.944	0.50
61_K	104_D	0.942	0.50
112_N	122_P	0.941	0.50
162_I	220_I	0.937	0.50
98_D	153_K	0.927	0.49
5_D	8_I	0.922	0.49
146_L	211_W	0.922	0.49
56_P	63_Q	0.922	0.49
67_A	89_L	0.921	0.49
59_F	129_A	0.919	0.49
111_K	120_Y	0.913	0.48
70_N	210_L	0.912	0.48
182_D	185_K	0.912	0.48
162_I	234_Y	0.911	0.48
196_K	204_V	0.907	0.48
109_M	156_N	0.905	0.47
64_I	120_Y	0.900	0.47
113_L	120_Y	0.891	0.46
112_N	117_V	0.888	0.46
39_K	51_K	0.886	0.46
170_R	177_V	0.886	0.46
135_K	220_I	0.877	0.45
82_K	90_N	0.877	0.45
116_P	123_V	0.875	0.45
98_D	103_K	0.873	0.45
202_S	232_R	0.869	0.45
45_G	126_L	0.868	0.45
17_R	87_E	0.865	0.44
8_I	25_S	0.860	0.44
57_N	63_Q	0.859	0.44
25_S	29_L	0.858	0.44
186_T	192_S	0.855	0.44
47_L	157_V	0.846	0.43
47_L	216_G	0.844	0.43
58_F	191_F	0.840	0.43
102_L	114_G	0.836	0.42
188_I	243_N	0.834	0.42
8_I	18_I	0.830	0.42
47_L	78_W	0.829	0.42
160_R	241_I	0.827	0.42
52_L	177_V	0.825	0.41
3_I	240_Q	0.822	0.41
84_K	191_F	0.822	0.41
61_K	95_Y	0.821	0.41
81_F	89_L	0.820	0.41
19_S	65_F	0.816	0.41
117_V	121_F	0.808	0.40
50_F	223_C	0.807	0.40
24_A	44_S	0.801	0.40
149_S	236_D	0.800	0.40
87_E	140_L	0.800	0.40
73_D	159_S	0.793	0.39
98_D	242_D	0.793	0.39
40_K	44_S	0.788	0.39
9_L	84_K	0.783	0.38
163_E	220_I	0.781	0.38
94_I	153_K	0.779	0.38
41_L	163_E	0.779	0.38
8_I	21_R	0.777	0.38
194_F	231_A	0.776	0.38
94_I	98_D	0.772	0.38
175_I	219_G	0.771	0.38
115_D	122_P	0.771	0.38
149_S	173_G	0.765	0.37
97_S	203_V	0.764	0.37
111_K	121_F	0.759	0.37
71_Y	116_P	0.759	0.37
78_W	169_L	0.759	0.37
115_D	223_C	0.757	0.37
34_L	156_N	0.757	0.37
8_I	101_E	0.757	0.37
110_T	141_K	0.756	0.36
182_D	193_I	0.754	0.36
115_D	126_L	0.754	0.36
68_F	147_S	0.753	0.36
140_L	169_L	0.749	0.36
83_L	90_N	0.748	0.36
16_G	170_R	0.742	0.35
105_K	110_T	0.742	0.35
39_K	43_D	0.740	0.35
197_N	243_N	0.739	0.35
151_I	169_L	0.739	0.35
139_I	151_I	0.732	0.35
20_Q	187_D	0.726	0.34
84_K	107_S	0.725	0.34
188_I	247_V	0.725	0.34
68_F	150_E	0.725	0.34
60_G	73_D	0.723	0.34
186_T	194_F	0.722	0.34
16_G	24_A	0.721	0.34
12_L	16_G	0.716	0.34
67_A	212_Q	0.715	0.34
52_L	144_P	0.712	0.33
145_R	165_H	0.711	0.33
88_W	234_Y	0.710	0.33
148_S	196_K	0.709	0.33
40_K	75_D	0.708	0.33
81_F	86_L	0.707	0.33
16_G	122_P	0.706	0.33
5_D	156_N	0.705	0.33
57_N	201_I	0.704	0.33
2_D	40_K	0.703	0.33
38_F	234_Y	0.698	0.32
97_S	103_K	0.695	0.32
111_K	196_K	0.695	0.32
78_W	148_S	0.694	0.32
70_N	73_D	0.693	0.32
153_K	213_F	0.691	0.32
47_L	63_Q	0.691	0.32
233_K	242_D	0.691	0.32
115_D	144_P	0.685	0.32
66_I	91_V	0.683	0.31
188_I	196_K	0.682	0.31
129_A	233_K	0.682	0.31
152_S	181_I	0.682	0.31
122_P	179_P	0.682	0.31
212_Q	232_R	0.681	0.31
19_S	114_G	0.680	0.31
6_K	226_D	0.680	0.31
31_P	215_D	0.679	0.31
150_E	238_A	0.678	0.31
110_T	244_T	0.677	0.31
101_E	197_N	0.676	0.31
41_L	249_I	0.674	0.31
24_A	238_A	0.674	0.31
137_V	167_R	0.672	0.31
63_Q	181_I	0.671	0.31
109_M	113_L	0.671	0.31
2_D	6_K	0.668	0.30
91_V	193_I	0.667	0.30
146_L	151_I	0.666	0.30
152_S	238_A	0.663	0.30
150_E	245_A	0.662	0.30
220_I	223_C	0.661	0.30
148_S	244_T	0.661	0.30
198_I	234_Y	0.659	0.30
115_D	130_S	0.654	0.30
193_I	223_C	0.653	0.30
4_I	240_Q	0.650	0.29
183_L	186_T	0.650	0.29
24_A	205_L	0.649	0.29
130_S	168_Y	0.648	0.29
111_K	116_P	0.647	0.29
75_D	146_L	0.647	0.29
106_I	142_I	0.643	0.29
31_P	161_I	0.640	0.29
66_I	217_Y	0.639	0.29
3_I	127_F	0.631	0.28
48_K	210_L	0.630	0.28
176_L	220_I	0.629	0.28
21_R	112_N	0.628	0.28
120_Y	123_V	0.627	0.28
235_I	238_A	0.624	0.28
83_L	137_V	0.623	0.28
32_A	176_L	0.623	0.28
64_I	234_Y	0.620	0.27
14_K	171_H	0.617	0.27
214_T	218_A	0.616	0.27
39_K	118_L	0.613	0.27
108_Y	112_N	0.610	0.27
159_S	188_I	0.608	0.27
198_I	218_A	0.605	0.27
3_I	199_D	0.603	0.26
180_Q	228_M	0.602	0.26
21_R	34_L	0.600	0.26
199_D	202_S	0.598	0.26
74_I	163_E	0.595	0.26
87_E	145_R	0.593	0.26
86_L	90_N	0.591	0.26
68_F	75_D	0.590	0.26
51_K	71_Y	0.590	0.26
200_E	241_I	0.590	0.26
3_I	63_Q	0.589	0.26
200_E	237_L	0.589	0.26
139_I	160_R	0.587	0.25
129_A	238_A	0.585	0.25
167_R	171_H	0.583	0.25
39_K	170_R	0.578	0.25
136_I	162_I	0.578	0.25
196_K	242_D	0.577	0.25
167_R	236_D	0.574	0.25
36_Y	67_A	0.574	0.25
149_S	155_I	0.573	0.25
99_N	189_I	0.571	0.25
19_S	197_N	0.571	0.25
36_Y	72_S	0.571	0.25
42_T	52_L	0.570	0.25
9_L	191_F	0.568	0.24
66_I	95_Y	0.567	0.24
90_N	93_G	0.565	0.24
147_S	182_D	0.564	0.24
57_N	193_I	0.562	0.24
96_A	136_I	0.561	0.24
16_G	43_D	0.561	0.24
4_I	27_L	0.561	0.24
149_S	230_R	0.560	0.24
41_L	137_V	0.558	0.24
22_R	171_H	0.556	0.24
15_D	165_H	0.555	0.24
67_A	92_Y	0.552	0.24
56_P	61_K	0.551	0.23
24_A	240_Q	0.551	0.23
128_R	166_I	0.550	0.23
19_S	94_I	0.550	0.23
203_V	238_A	0.546	0.23
100_T	188_I	0.546	0.23
175_I	206_Q	0.545	0.23
102_L	130_S	0.543	0.23
205_L	242_D	0.542	0.23
91_V	107_S	0.541	0.23
177_V	218_A	0.541	0.23
7_R	127_F	0.539	0.23
67_A	195_S	0.537	0.23
65_F	220_I	0.536	0.23
166_I	223_C	0.532	0.22
112_N	116_P	0.530	0.22
97_S	102_L	0.530	0.22
7_R	66_I	0.529	0.22
8_I	121_F	0.526	0.22
36_Y	234_Y	0.526	0.22
59_F	126_L	0.525	0.22
241_I	244_T	0.519	0.22
137_V	155_I	0.517	0.22
53_Y	148_S	0.515	0.22
122_P	210_L	0.514	0.21
27_L	105_K	0.510	0.21
15_D	23_I	0.510	0.21
134_Q	153_K	0.510	0.21
166_I	175_I	0.509	0.21
115_D	119_S	0.508	0.21
112_N	126_L	0.507	0.21
118_L	238_A	0.506	0.21
131_N	139_I	0.503	0.21
130_S	239_R	0.501	0.21
28_N	43_D	0.500	0.21
27_L	243_N	0.500	0.21
24_A	135_K	0.500	0.21
174_L	191_F	0.500	0.21

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4ch7A	1	0.9648	100	0.356	Contact Map
4un1B	1	0.5312	99.8	0.696	Contact Map
4un1A	1	0.5	99.8	0.697	Contact Map
2p5vA	5	0.5195	99.8	0.699	Contact Map
4pcqA	2	0.5156	99.8	0.701	Contact Map
2cg4A	6	0.5078	99.8	0.703	Contact Map
2e1cA	1	0.5273	99.8	0.705	Contact Map
2ia0A	2	0.4961	99.8	0.71	Contact Map
2pn6A	5	0.5	99.8	0.717	Contact Map
3i4pA	5	0.4961	99.8	0.721	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0085 seconds.