GREMLIN Database
Y2030 - Putative ABC transporter ATP-binding protein SSO2030
UniProt: Q97WT4 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 530 (476)
Sequences: 1436 (1017)
Seq/√Len: 46.6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
6_I9_L5.5731.00
401_L410_R5.5061.00
286_S299_N4.6771.00
8_D23_V4.6711.00
308_T485_Y4.2551.00
128_M137_R4.2181.00
7_R66_E4.1431.00
79_I82_I3.8591.00
361_F436_K3.8161.00
11_V46_T3.6891.00
498_G502_E3.6621.00
32_E212_R3.5361.00
379_E411_K3.4101.00
284_Y287_V3.4041.00
34_V214_I3.3581.00
22_V220_K3.3551.00
324_L472_V3.3051.00
5_E27_D3.2881.00
283_L303_S3.1181.00
311_A483_A3.0981.00
285_A342_K2.9831.00
85_Y163_K2.9771.00
298_I493_K2.9071.00
9_L50_V2.8761.00
473_T479_V2.8381.00
212_R224_D2.8151.00
214_I221_I2.7751.00
8_D25_K2.6991.00
403_M461_E2.6821.00
5_E68_R2.4491.00
51_I197_V2.4291.00
146_G367_Q2.4261.00
286_S301_K2.4191.00
129_K134_S2.3961.00
379_E410_R2.3921.00
461_E465_K2.3881.00
279_K306_Q2.3541.00
48_V199_V2.3231.00
402_K407_D2.2701.00
106_V128_M2.2501.00
283_L344_I2.2331.00
106_V137_R2.1451.00
280_G305_K2.0831.00
29_E32_E2.0771.00
62_E67_V2.0721.00
26_L214_I2.0460.99
289_V326_V2.0010.99
226_R229_E1.9960.99
6_I26_L1.9860.99
66_E73_D1.9820.99
207_L231_V1.9800.99
4_V69_V1.9710.99
247_Y250_F1.9630.99
12_T19_P1.9550.99
106_V159_A1.9480.99
432_A437_V1.9460.99
419_M423_R1.9410.99
324_L439_L1.9350.99
103_I107_A1.9320.99
19_P22_V1.9070.99
87_G157_V1.8750.99
225_V229_E1.8700.99
304_L310_T1.8560.99
297_L322_T1.8180.99
284_Y327_I1.8140.99
28_I34_V1.7960.99
370_D373_F1.7920.99
186_V196_L1.7770.99
9_L67_V1.7710.99
280_G306_Q1.7480.98
270_Y273_P1.7360.98
126_E188_T1.6990.98
392_Y434_G1.6710.98
45_S49_S1.6620.98
373_F381_E1.6540.98
251_L254_N1.6490.98
409_Y412_E1.6480.98
284_Y302_I1.6480.98
126_E192_E1.6470.98
425_V429_S1.6160.97
6_I51_I1.6130.97
187_K208_P1.6120.97
35_L210_V1.6000.97
107_A124_V1.5950.97
249_L252_K1.5830.97
285_A301_K1.5670.97
10_Q23_V1.5490.96
151_R178_G1.5480.96
217_E254_N1.5450.96
398_G410_R1.5340.96
454_I457_K1.5320.96
372_M381_E1.5040.96
320_K474_H1.5000.96
379_E383_K1.4920.96
308_T484_D1.4910.96
286_S340_E1.4890.96
246_D250_F1.4840.95
285_A344_I1.4810.95
78_P81_E1.4790.95
66_E75_K1.4790.95
320_K441_D1.4770.95
116_S119_E1.4500.95
101_T104_D1.4490.95
241_G246_D1.4470.95
179_T202_K1.4460.95
10_Q19_P1.4430.95
247_Y254_N1.4410.95
242_L246_D1.4400.95
6_I67_V1.4390.95
23_V220_K1.4350.95
386_M393_D1.4330.95
316_N320_K1.4330.95
378_V381_E1.4330.95
247_Y251_L1.4270.94
108_F112_N1.4210.94
103_I137_R1.4140.94
247_Y252_K1.4040.94
45_S92_D1.3990.94
320_K442_E1.3940.94
280_G283_L1.3910.94
304_L470_L1.3900.94
48_V166_I1.3800.93
121_I125_E1.3730.93
243_E246_D1.3670.93
163_K194_I1.3520.93
30_E163_K1.3460.92
397_L400_V1.3410.92
175_D320_K1.3400.92
77_T81_E1.3390.92
241_G244_I1.3310.92
175_D474_H1.3300.92
52_N166_I1.3300.92
33_S186_V1.3300.92
252_K255_G1.3150.92
243_E250_F1.3070.91
305_K308_T1.3030.91
246_D254_N1.2990.91
105_E156_S1.2970.91
316_N474_H1.2940.91
248_M252_K1.2870.91
119_E123_R1.2770.90
147_G320_K1.2770.90
290_K295_I1.2730.90
441_D474_H1.2670.90
242_L249_L1.2660.90
252_K256_F1.2640.90
49_S54_V1.2630.90
269_T272_P1.2620.90
357_E360_K1.2580.90
246_D252_K1.2560.90
399_E403_M1.2540.90
35_L213_I1.2540.90
200_E206_V1.2500.89
397_L432_A1.2490.89
392_Y395_K1.2450.89
280_G303_S1.2330.89
187_K191_S1.2320.89
281_E305_K1.2310.89
311_A479_V1.2260.88
96_Q112_N1.2210.88
246_D253_K1.2210.88
145_S474_H1.2090.88
307_G466_G1.2070.88
245_P250_F1.2020.87
45_S199_V1.1950.87
310_T470_L1.1940.87
247_Y253_K1.1880.87
246_D251_L1.1710.86
366_P372_M1.1710.86
103_I138_D1.1710.86
147_G474_H1.1590.85
243_E251_L1.1550.85
246_D249_L1.1420.85
195_S212_R1.1350.84
309_I459_L1.1290.84
4_V197_V1.1290.84
268_Y273_P1.1280.84
328_V439_L1.1260.84
254_N258_K1.1260.84
248_M253_K1.1260.84
228_D232_D1.1200.83
327_I425_V1.1180.83
250_F254_N1.1160.83
201_H418_S1.1140.83
456_G478_F1.1080.83
473_T478_F1.1060.83
376_R381_E1.1000.82
119_E122_E1.0980.82
447_Q455_L1.0900.82
201_H475_D1.0880.82
454_I458_E1.0840.81
125_E129_K1.0790.81
40_S424_R1.0780.81
316_N441_D1.0780.81
326_V333_K1.0750.81
462_L467_Y1.0750.81
239_S242_L1.0750.81
47_L216_V1.0740.81
21_I47_L1.0660.80
147_G317_G1.0580.80
147_G316_N1.0560.80
253_K258_K1.0520.79
70_F163_K1.0500.79
103_I121_I1.0440.79
4_V195_S1.0390.78
298_I491_E1.0370.78
33_S195_S1.0320.78
485_Y497_E1.0310.78
321_T441_D1.0230.77
397_L410_R1.0150.77
299_N340_E1.0100.76
300_T494_I1.0070.76
249_L253_K1.0050.76
239_S243_E1.0020.76
400_V431_L0.9910.75
306_Q468_T0.9890.75
356_V360_K0.9880.75
36_I42_S0.9880.75
27_D348_V0.9870.75
442_E474_H0.9840.75
21_I216_V0.9840.75
154_L167_L0.9820.74
412_E416_V0.9800.74
322_T474_H0.9790.74
109_G160_M0.9780.74
225_V230_I0.9750.74
135_H148_E0.9750.74
304_L327_I0.9720.74
300_T489_M0.9710.74
110_V120_M0.9690.73
223_V230_I0.9690.73
242_L245_P0.9670.73
267_T270_Y0.9660.73
456_G482_F0.9620.73
251_L255_G0.9580.73
297_L326_V0.9580.73
460_L463_R0.9560.72
72_F84_K0.9560.72
171_T205_R0.9520.72
34_V212_R0.9500.72
126_E129_K0.9490.72
310_T487_L0.9430.71
130_I188_T0.9420.71
241_G249_L0.9370.71
406_L424_R0.9340.71
42_S327_I0.9290.70
342_K349_D0.9270.70
164_A195_S0.9270.70
248_M251_L0.9210.70
287_V326_V0.9200.69
239_S246_D0.9180.69
245_P248_M0.9170.69
399_E434_G0.9160.69
125_E134_S0.9150.69
249_L254_N0.9150.69
241_G245_P0.9120.69
109_G159_A0.9120.69
250_F253_K0.9050.68
243_E249_L0.9010.68
365_L427_M0.8970.67
344_I349_D0.8970.67
455_L459_L0.8950.67
325_K331_I0.8920.67
413_D416_V0.8910.67
459_L463_R0.8910.67
313_M479_V0.8910.67
167_L446_G0.8860.67
316_N442_E0.8850.66
445_S452_R0.8820.66
148_E206_V0.8810.66
103_I106_V0.8800.66
436_K467_Y0.8730.65
90_L96_Q0.8730.65
239_S245_P0.8720.65
40_S112_N0.8690.65
81_E398_G0.8660.65
175_D441_D0.8620.64
300_T427_M0.8620.64
401_L437_V0.8620.64
190_R196_L0.8610.64
244_I247_Y0.8610.64
285_A402_K0.8590.64
158_L165_L0.8490.63
247_Y256_F0.8460.63
24_D66_E0.8460.63
254_N257_R0.8450.63
72_F77_T0.8420.63
136_L139_R0.8400.62
380_D489_M0.8390.62
278_G306_Q0.8360.62
175_D316_N0.8350.62
238_Y242_L0.8340.62
33_S196_L0.8330.62
189_F440_M0.8320.62
243_E247_Y0.8280.61
239_S247_Y0.8260.61
279_K391_T0.8250.61
367_Q474_H0.8210.61
103_I110_V0.8210.61
40_S414_P0.8210.61
479_V486_L0.8180.60
147_G175_D0.8140.60
131_Y152_T0.8120.60
6_I164_A0.8120.60
117_R121_I0.8090.59
459_L469_I0.8090.59
499_K502_E0.8080.59
460_L464_D0.8080.59
245_P251_L0.8070.59
7_R27_D0.8060.59
382_I429_S0.8050.59
105_E381_E0.8040.59
377_T381_E0.8010.59
13_Y108_F0.7990.58
288_K295_I0.7940.58
306_Q466_G0.7940.58
107_A128_M0.7920.58
459_L480_D0.7910.58
108_F160_M0.7900.58
27_D192_E0.7860.57
285_A303_S0.7860.57
404_F428_A0.7860.57
239_S244_I0.7850.57
161_R194_I0.7850.57
431_L458_E0.7850.57
325_K330_L0.7800.57
106_V187_K0.7800.57
418_S421_Q0.7750.56
18_K64_K0.7750.56
245_P252_K0.7740.56
173_N445_S0.7730.56
316_N322_T0.7720.56
201_H419_M0.7720.56
394_E465_K0.7710.56
214_I224_D0.7690.56
297_L489_M0.7680.55
362_I437_V0.7670.55
102_I484_D0.7670.55
47_L102_I0.7650.55
204_E480_D0.7600.55
28_I51_I0.7590.55
35_L365_L0.7580.54
396_R399_E0.7550.54
253_K256_F0.7540.54
268_Y272_P0.7520.54
382_I397_L0.7500.54
313_M476_S0.7490.54
145_S148_E0.7480.53
366_P371_V0.7480.53
349_D352_K0.7460.53
487_L494_I0.7460.53
111_E120_M0.7460.53
201_H447_Q0.7460.53
270_Y276_I0.7450.53
291_T439_L0.7440.53
41_G44_K0.7440.53
250_F255_G0.7420.53
414_P425_V0.7420.53
12_T22_V0.7400.53
100_Y105_E0.7400.53
444_T473_T0.7380.52
98_F173_N0.7380.52
123_R126_E0.7380.52
188_T405_S0.7370.52
45_S87_G0.7350.52
145_S320_K0.7330.52
291_T326_V0.7330.52
241_G247_Y0.7310.52
244_I249_L0.7290.52
13_Y55_I0.7280.52
93_P97_A0.7280.52
182_I487_L0.7270.51
453_Q481_R0.7250.51
406_L425_V0.7250.51
323_L489_M0.7230.51
272_P275_R0.7220.51
497_E502_E0.7220.51
371_V381_E0.7220.51
200_E373_F0.7220.51
46_T49_S0.7210.51
145_S316_N0.7200.51
7_R25_K0.7200.51
140_E143_T0.7180.51
115_I122_E0.7150.50
38_G43_G0.7130.50
4_V28_I0.7130.50
291_T298_I0.7120.50
107_A121_I0.7100.50
7_R68_R0.7090.50
145_S175_D0.7090.50
96_Q108_F0.7070.49
203_I210_V0.7070.49
374_I381_E0.7060.49
40_S88_T0.7060.49
36_I216_V0.7050.49
224_D229_E0.7050.49
72_F81_E0.7040.49
158_L176_P0.7030.49
383_K397_L0.7020.49
73_D76_S0.7020.49
155_A159_A0.7020.49
244_I251_L0.7000.49
125_E137_R0.7000.49
92_D172_S0.7000.49
134_S137_R0.7000.49
129_K220_K0.6990.49
146_G474_H0.6990.49
198_L424_R0.6970.48
321_T460_L0.6960.48
4_V164_A0.6960.48
38_G44_K0.6940.48
98_F452_R0.6940.48
216_V343_V0.6940.48
46_T497_E0.6930.48
118_D122_E0.6930.48
32_E211_D0.6900.48
271_R274_S0.6900.48
462_L469_I0.6890.48
11_V50_V0.6890.48
111_E414_P0.6890.48
175_D444_T0.6880.48
90_L112_N0.6880.48
45_S93_P0.6870.47
138_D412_E0.6870.47
78_P212_R0.6870.47
316_N440_M0.6860.47
317_G441_D0.6860.47
175_D321_T0.6850.47
184_E191_S0.6850.47
10_Q25_K0.6840.47
89_L199_V0.6810.47
348_V352_K0.6800.47
98_F472_V0.6790.47
221_I303_S0.6780.47
231_V234_A0.6760.46
13_Y46_T0.6760.46
401_L421_Q0.6750.46
51_I333_K0.6740.46
174_I418_S0.6730.46
116_S499_K0.6730.46
213_I425_V0.6730.46
220_K486_L0.6730.46
452_R478_F0.6720.46
253_K257_R0.6710.46
173_N452_R0.6700.46
21_I24_D0.6670.45
404_F431_L0.6670.45
145_S441_D0.6660.45
174_I202_K0.6650.45
423_R445_S0.6650.45
150_Q172_S0.6640.45
289_V334_K0.6630.45
232_D285_A0.6630.45
243_E252_K0.6630.45
317_G320_K0.6620.45
227_K230_I0.6620.45
487_L497_E0.6610.45
38_G41_G0.6600.45
150_Q423_R0.6600.45
166_I200_E0.6600.45
231_V401_L0.6560.44
321_T474_H0.6560.44
400_V432_A0.6510.44
95_T216_V0.6510.44
91_Q446_G0.6510.44
110_V159_A0.6500.44
89_L93_P0.6500.44
10_Q374_I0.6490.44
288_K298_I0.6490.44
216_V221_I0.6480.44
146_G442_E0.6450.43
153_I214_I0.6450.43
422_R445_S0.6450.43
375_K381_E0.6430.43
316_N367_Q0.6420.43
269_T273_P0.6420.43
243_E248_M0.6390.43
270_Y397_L0.6380.43
205_R478_F0.6380.43
164_A340_E0.6380.43
242_L247_Y0.6370.43
133_I438_I0.6370.43
267_T273_P0.6360.42
404_F458_E0.6360.42
344_I396_R0.6340.42
409_Y414_P0.6330.42
424_R445_S0.6330.42
331_I481_R0.6320.42
201_H421_Q0.6310.42
31_G193_G0.6300.42
247_Y255_G0.6300.42
297_L300_T0.6290.42
306_Q436_K0.6290.42
11_V49_S0.6280.42
161_R286_S0.6260.41
116_S399_E0.6260.41
268_Y276_I0.6250.41
40_S96_Q0.6250.41
121_I305_K0.6240.41
379_E397_L0.6240.41
150_Q171_T0.6210.41
401_L414_P0.6210.41
173_N202_K0.6210.41
169_E418_S0.6210.41
198_L464_D0.6210.41
40_S447_Q0.6210.41
152_T480_D0.6200.41
242_L250_F0.6190.41
36_I123_R0.6180.41
478_F482_F0.6180.41
376_R380_D0.6180.41
240_L245_P0.6170.41
97_A141_I0.6170.41
93_P111_E0.6160.41
98_F179_T0.6140.40
241_G248_M0.6120.40
67_V411_K0.6110.40
163_K240_L0.6100.40
351_S354_K0.6090.40
32_E195_S0.6090.40
226_R391_T0.6080.40
95_T130_I0.6070.40
151_R181_E0.6070.40
105_E141_I0.6060.40
340_E498_G0.6060.40
281_E346_N0.6060.40
352_K400_V0.6060.40
193_G493_K0.6040.39
91_Q444_T0.6040.39
25_K118_D0.6030.39
6_I208_P0.6020.39
117_R501_E0.6020.39
249_L258_K0.6010.39
93_P414_P0.6010.39
182_I488_V0.6010.39
139_R143_T0.6010.39
8_D12_T0.6000.39
70_F274_S0.5990.39
150_Q446_G0.5990.39
27_D229_E0.5980.39
288_K340_E0.5960.39
133_I136_L0.5960.39
202_K452_R0.5950.39
136_L148_E0.5950.39
151_R452_R0.5950.39
25_K276_I0.5950.39
288_K299_N0.5940.38
363_A435_A0.5940.38
309_I423_R0.5930.38
282_A304_L0.5930.38
148_E152_T0.5930.38
286_S457_K0.5930.38
26_L126_E0.5920.38
342_K400_V0.5910.38
223_V233_K0.5910.38
379_E398_G0.5890.38
222_A290_K0.5890.38
207_L496_L0.5880.38
312_L386_M0.5880.38
403_M458_E0.5870.38
396_R434_G0.5860.38
11_V63_I0.5850.38
98_F148_E0.5850.38
116_S272_P0.5850.38
31_G106_V0.5840.38
193_G232_D0.5840.38
5_E8_D0.5840.38
51_I66_E0.5840.38
235_D238_Y0.5820.37
84_K213_I0.5820.37
154_L176_P0.5820.37
182_I312_L0.5810.37
148_E183_L0.5810.37
170_P443_P0.5790.37
90_L98_F0.5790.37
435_A440_M0.5780.37
105_E108_F0.5740.37
89_L94_D0.5740.37
89_L154_L0.5730.37
419_M424_R0.5720.36
277_G305_K0.5720.36
257_R268_Y0.5720.36
64_K398_G0.5710.36
45_S55_I0.5710.36
312_L470_L0.5700.36
239_S251_L0.5700.36
400_V428_A0.5690.36
15_G274_S0.5690.36
90_L105_E0.5670.36
303_S399_E0.5670.36
245_P249_L0.5660.36
101_T300_T0.5660.36
197_V231_V0.5650.36
86_V285_A0.5640.36
127_S196_L0.5640.36
159_A432_A0.5640.36
423_R447_Q0.5640.36
178_G372_M0.5620.36
147_G441_D0.5610.35
197_V226_R0.5600.35
179_T204_E0.5600.35
6_I50_V0.5600.35
373_F384_F0.5600.35
93_P109_G0.5590.35
330_L422_R0.5590.35
165_L194_I0.5590.35
173_N206_V0.5580.35
224_D227_K0.5580.35
106_V155_A0.5560.35
279_K501_E0.5560.35
273_P278_G0.5560.35
192_E340_E0.5520.35
322_T441_D0.5520.35
234_A237_L0.5510.35
89_L201_H0.5500.34
256_F275_R0.5500.34
284_Y453_Q0.5460.34
19_P405_S0.5460.34
192_E197_V0.5460.34
269_T274_S0.5460.34
206_V423_R0.5450.34
255_G258_K0.5440.34
200_E478_F0.5440.34
130_I185_L0.5440.34
22_V494_I0.5440.34
81_E197_V0.5420.34
245_P253_K0.5420.34
309_I439_L0.5420.34
27_D276_I0.5410.34
14_M20_S0.5410.34
11_V213_I0.5400.34
248_M254_N0.5390.33
172_S426_A0.5390.33
204_E207_L0.5390.33
332_D357_E0.5380.33
146_G424_R0.5380.33
405_S408_A0.5380.33
27_D436_K0.5370.33
328_V364_Y0.5370.33
145_S442_E0.5360.33
70_F122_E0.5360.33
358_R400_V0.5340.33
310_T469_I0.5340.33
23_V228_D0.5330.33
381_E384_F0.5330.33
258_K268_Y0.5330.33
273_P344_I0.5320.33
210_V459_L0.5320.33
102_I391_T0.5310.33
146_G320_K0.5310.33
496_L499_K0.5310.33
171_T182_I0.5310.33
39_R217_E0.5300.33
400_V403_M0.5300.33
320_K367_Q0.5300.33
150_Q444_T0.5290.33
255_G278_G0.5290.33
322_T326_V0.5280.32
90_L99_N0.5280.32
83_S153_I0.5280.32
191_S228_D0.5250.32
40_S381_E0.5250.32
243_E254_N0.5250.32
53_G424_R0.5240.32
179_T452_R0.5240.32
21_I50_V0.5230.32
94_D154_L0.5230.32
131_Y136_L0.5230.32
122_E126_E0.5220.32
398_G407_D0.5220.32
99_N105_E0.5220.32
23_V461_E0.5220.32
92_D108_F0.5220.32
172_S201_H0.5220.32
229_E342_K0.5200.32
450_Y454_I0.5200.32
48_V480_D0.5200.32
312_L473_T0.5190.32
213_I362_I0.5190.32
132_G193_G0.5180.32
63_I105_E0.5160.31
202_K205_R0.5160.31
301_K344_I0.5160.31
79_I83_S0.5160.31
183_L206_V0.5150.31
334_K436_K0.5150.31
71_G275_R0.5150.31
5_E29_E0.5140.31
290_K379_E0.5130.31
101_T111_E0.5120.31
98_F105_E0.5100.31
49_S55_I0.5100.31
90_L94_D0.5100.31
6_I15_G0.5090.31
149_L426_A0.5080.31
240_L246_D0.5080.31
268_Y271_R0.5060.31
244_I254_N0.5050.31
169_E201_H0.5050.31
116_S121_I0.5040.30
175_D367_Q0.5040.30
184_E408_A0.5040.30
487_L490_N0.5040.30
371_V374_I0.5040.30
247_Y258_K0.5030.30
105_E202_K0.5030.30
230_I233_K0.5030.30
188_T192_E0.5020.30
378_V425_V0.5020.30
12_T122_E0.5020.30
296_Y322_T0.5010.30
460_L484_D0.5010.30
154_L162_P0.5000.30
427_M447_Q0.5000.30
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4q9hA 1 0.9226 100 0.299 Contact Map
4f4cA 1 0.9038 100 0.314 Contact Map
4finA 2 0.8981 100 0.326 Contact Map
1yqtA 1 0.9057 100 0.353 Contact Map
3ozxA 1 0.8887 100 0.356 Contact Map
3bk7A 1 0.917 100 0.357 Contact Map
2iw3A 2 0.8245 100 0.363 Contact Map
3j16B 1 0.9075 100 0.371 Contact Map
3ux8A 2 0.8245 100 0.382 Contact Map
2vf7A 2 0.9208 100 0.455 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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