Q97WH8 - SULSO - GREMLIN Contacts

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Q97WH8 - BPS2 protein homolog (Bps2)

UniProt:	Q97WH8	Sequences: MKVRVFNIGGITQEYSLELEKGVTSYEAPNAYGKTSLVRSLISLLTSSIKAEDLLNVFADSGYVEAELDNKLYYRRIKRIRNGLGEEKNLIMDDDRALLLTYFSPENRLVTQILSGDGNVEWFISTTSKINEIKAKKEELQKLLTAEINARDELQKKYNNIREIQAKIRAIDEEIDKLEKERESSSNIVAKTTYTITLTRQNKINEILNKIKVKKDELANLEFALKKIEEEIQNKESKVSPDIKTQLEKEMEEINEKLKLKTNDRSELEIELKVLERVLEEVNESDRHHLDTCNVCGSKVDPSIWKERAEIISRELRDKTSLLDSLRNDIIGLQKRKEEIDLRLKELQTLENEIAKLKAKKEELINRIGSVKFQIDDLERQRRETEERFSKSESLSGAIATNDDSASILKRIEELRKKREEYEYELQLLGIPSSILEELKEKEEHIEQLQKKVDELQVEYIRRLTKAREEFNRIANQLLKRFEFDMDAEIDGNYRLIVKRKGAIIDIKKLSSSERTTLALILVLSALRAYFKTPYFIIDESAMTFDQKRFNRLLEYLTEIADYVIVTRSSENTEIKTLPPKQIELSS	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	587 (476)
Sequences:	9152 (8531)
Seq/√Len:	391.0

ECOLI - SBCC RECN
BACSU - YHAN SBCC RECN YYDD SMC
HALSA - SPH1 SPH2 RAD50 Q9HS95
SULSO - Q97WH8 RAD50

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
75_R	81_R	3.060	1.00
272_L	276_E	2.469	1.00
4_R	16_S	2.222	1.00
51_A	54_L	2.157	1.00
311_I	315_E	1.996	1.00
6_F	14_E	1.979	1.00
4_R	14_E	1.976	1.00
439_L	443_E	1.972	1.00
293_C	297_G	1.972	1.00
271_E	274_V	1.946	1.00
75_R	79_R	1.910	1.00
206_E	210_K	1.883	1.00
297_G	301_D	1.854	1.00
438_E	441_E	1.841	1.00
265_R	269_E	1.820	1.00
337_K	341_D	1.815	1.00
252_E	255_N	1.798	1.00
158_Y	162_R	1.789	1.00
4_R	65_E	1.787	1.00
436_L	440_K	1.775	1.00
375_I	379_E	1.773	1.00
369_G	372_K	1.731	1.00
376_D	379_E	1.729	1.00
220_N	224_A	1.724	1.00
234_N	238_K	1.722	1.00
176_D	179_E	1.720	1.00
75_R	78_K	1.718	1.00
221_L	224_A	1.694	1.00
79_R	82_N	1.689	1.00
273_K	276_E	1.685	1.00
199_T	203_K	1.683	1.00
307_E	311_I	1.682	1.00
431_I	434_S	1.676	1.00
318_D	322_L	1.670	1.00
361_K	365_I	1.666	1.00
304_I	308_R	1.662	1.00
319_K	322_L	1.655	1.00
70_N	73_Y	1.647	1.00
264_D	267_E	1.641	1.00
407_S	411_R	1.640	1.00
78_K	82_N	1.635	1.00
479_L	483_E	1.634	1.00
50_K	54_L	1.634	1.00
411_R	414_E	1.632	1.00
260_L	264_D	1.613	1.00
226_K	229_E	1.605	1.00
278_V	281_E	1.594	1.00
151_R	155_Q	1.585	1.00
267_E	271_E	1.583	1.00
213_V	217_E	1.563	1.00
231_E	234_N	1.562	1.00
325_S	329_D	1.562	1.00
356_K	360_K	1.557	1.00
398_A	402_N	1.556	1.00
182_R	186_S	1.555	1.00
229_E	233_Q	1.554	1.00
346_E	349_T	1.550	1.00
293_C	296_C	1.549	1.00
382_R	386_E	1.548	1.00
78_K	81_R	1.546	1.00
296_C	299_K	1.540	1.00
302_P	306_K	1.538	1.00
253_E	257_K	1.537	1.00
227_K	231_E	1.534	1.00
443_E	447_E	1.534	1.00
274_V	278_V	1.526	1.00
76_R	79_R	1.524	1.00
303_S	306_K	1.523	1.00
332_G	336_R	1.515	1.00
453_V	457_Q	1.513	1.00
187_N	191_K	1.510	1.00
300_V	304_I	1.505	1.00
77_I	81_R	1.504	1.00
316_L	320_T	1.504	1.00
333_L	337_K	1.502	1.00
174_E	177_K	1.500	1.00
334_Q	338_E	1.495	1.00
208_L	212_K	1.487	1.00
190_A	193_T	1.487	1.00
228_I	231_E	1.483	1.00
314_R	318_D	1.479	1.00
327_R	331_I	1.478	1.00
414_E	418_K	1.474	1.00
450_Q	454_D	1.474	1.00
257_K	260_L	1.473	1.00
76_R	81_R	1.472	1.00
381_Q	384_E	1.470	1.00
224_A	227_K	1.468	1.00
313_S	317_R	1.459	1.00
417_K	421_E	1.454	1.00
306_K	310_E	1.453	1.00
354_I	358_K	1.448	1.00
335_K	339_E	1.444	1.00
266_S	269_E	1.441	1.00
6_F	63_Y	1.436	1.00
250_E	253_E	1.436	1.00
210_K	213_V	1.435	1.00
333_L	336_R	1.432	1.00
412_I	416_R	1.432	1.00
211_I	215_K	1.427	1.00
217_E	220_N	1.425	1.00
418_K	421_E	1.415	1.00
280_E	283_N	1.414	1.00
353_E	356_K	1.412	1.00
232_I	236_E	1.406	1.00
390_S	393_E	1.403	1.00
225_L	229_E	1.402	1.00
75_R	82_N	1.397	1.00
9_G	36_S	1.393	1.00
413_E	416_R	1.390	1.00
209_N	213_V	1.385	1.00
383_R	386_E	1.385	1.00
291_D	294_N	1.381	1.00
294_N	297_G	1.380	1.00
309_A	313_S	1.373	1.00
252_E	256_E	1.373	1.00
475_A	479_L	1.368	1.00
472_N	476_N	1.355	1.00
77_I	80_I	1.355	1.00
330_I	334_Q	1.353	1.00
294_N	298_S	1.346	1.00
446_I	450_Q	1.345	1.00
246_Q	250_E	1.340	1.00
370_S	374_Q	1.332	1.00
441_E	445_H	1.331	1.00
310_E	313_S	1.331	1.00
277_R	281_E	1.330	1.00
290_L	294_N	1.328	1.00
371_V	374_Q	1.328	1.00
408_I	412_I	1.328	1.00
212_K	216_D	1.326	1.00
256_E	260_L	1.323	1.00
459_E	463_R	1.322	1.00
351_E	355_A	1.320	1.00
126_T	129_K	1.320	1.00
352_N	356_K	1.317	1.00
365_I	369_G	1.313	1.00
357_L	361_K	1.312	1.00
288_H	292_T	1.309	1.00
262_T	266_S	1.308	1.00
321_S	325_S	1.306	1.00
322_L	325_S	1.302	1.00
270_I	273_K	1.302	1.00
230_E	234_N	1.296	1.00
226_K	230_E	1.296	1.00
261_K	265_R	1.296	1.00
179_E	183_E	1.294	1.00
437_E	441_E	1.294	1.00
315_E	319_K	1.293	1.00
268_L	272_L	1.293	1.00
360_K	363_E	1.290	1.00
266_S	270_I	1.288	1.00
289_H	293_C	1.284	1.00
76_R	82_N	1.283	1.00
255_N	259_K	1.282	1.00
329_D	332_G	1.282	1.00
203_K	206_E	1.280	1.00
415_L	419_R	1.272	1.00
413_E	417_K	1.272	1.00
368_I	372_K	1.270	1.00
105_P	108_R	1.267	1.00
75_R	80_I	1.266	1.00
298_S	301_D	1.265	1.00
247_L	251_M	1.265	1.00
386_E	390_S	1.265	1.00
317_R	320_T	1.265	1.00
216_D	220_N	1.263	1.00
292_T	296_C	1.262	1.00
373_F	376_D	1.254	1.00
358_K	362_E	1.252	1.00
254_I	258_L	1.251	1.00
267_E	270_I	1.245	1.00
44_L	66_A	1.241	1.00
215_K	219_A	1.240	1.00
308_R	311_I	1.239	1.00
100_L	104_S	1.239	1.00
218_L	222_E	1.237	1.00
189_V	193_T	1.237	1.00
303_S	307_E	1.236	1.00
359_A	363_E	1.234	1.00
367_R	370_S	1.234	1.00
233_Q	236_E	1.233	1.00
212_K	215_K	1.231	1.00
373_F	377_D	1.231	1.00
440_K	443_E	1.228	1.00
236_E	240_S	1.225	1.00
336_R	339_E	1.224	1.00
432_P	436_L	1.223	1.00
338_E	341_D	1.222	1.00
374_Q	377_D	1.221	1.00
9_G	25_S	1.212	1.00
324_D	327_R	1.211	1.00
235_K	239_V	1.208	1.00
289_H	292_T	1.208	1.00
447_E	450_Q	1.204	1.00
323_L	327_R	1.202	1.00
263_N	267_E	1.199	1.00
384_E	388_R	1.198	1.00
321_S	324_D	1.197	1.00
271_E	275_L	1.195	1.00
105_P	109_L	1.190	1.00
90_L	93_D	1.189	1.00
186_S	190_A	1.189	1.00
445_H	448_Q	1.187	1.00
349_T	353_E	1.186	1.00
328_N	332_G	1.185	1.00
222_E	226_K	1.183	1.00
416_R	420_E	1.183	1.00
363_E	367_R	1.182	1.00
150_A	154_L	1.181	1.00
319_K	323_L	1.178	1.00
320_T	324_D	1.177	1.00
270_I	274_V	1.177	1.00
310_E	314_R	1.175	1.00
312_I	315_E	1.175	1.00
357_L	360_K	1.171	1.00
434_S	438_E	1.168	1.00
315_E	318_D	1.168	1.00
471_F	475_A	1.165	1.00
8_I	43_S	1.163	1.00
364_L	368_I	1.162	1.00
385_T	389_F	1.161	1.00
466_K	470_E	1.159	1.00
219_A	222_E	1.157	1.00
476_N	479_L	1.156	1.00
326_L	329_D	1.155	1.00
340_I	343_R	1.154	1.00
442_K	445_H	1.153	1.00
399_I	402_N	1.152	1.00
305_W	309_A	1.151	1.00
377_D	381_Q	1.149	1.00
397_G	400_A	1.149	1.00
183_E	186_S	1.148	1.00
163_E	166_A	1.147	1.00
269_E	273_K	1.147	1.00
457_Q	461_I	1.144	1.00
258_L	262_T	1.144	1.00
274_V	277_R	1.144	1.00
372_K	376_D	1.143	1.00
361_K	364_L	1.143	1.00
86_E	90_L	1.141	1.00
347_L	351_E	1.138	1.00
335_K	338_E	1.133	1.00
200_R	203_K	1.132	1.00
148_I	151_R	1.132	1.00
410_K	414_E	1.131	1.00
438_E	442_K	1.129	1.00
275_L	279_L	1.128	1.00
411_R	415_L	1.125	1.00
314_R	317_R	1.125	1.00
170_A	174_E	1.124	1.00
298_S	302_P	1.123	1.00
84_L	90_L	1.123	1.00
301_D	305_W	1.107	1.00
248_E	252_E	1.106	1.00
77_I	82_N	1.106	1.00
405_S	409_L	1.102	1.00
214_K	217_E	1.101	1.00
219_A	223_F	1.100	1.00
307_E	310_E	1.099	1.00
235_K	238_K	1.095	1.00
296_C	300_V	1.092	1.00
9_G	39_R	1.091	1.00
87_E	90_L	1.090	1.00
451_K	455_E	1.089	1.00
50_K	53_D	1.088	1.00
406_A	409_L	1.087	1.00
364_L	367_R	1.087	1.00
324_D	328_N	1.087	1.00
43_S	64_V	1.086	1.00
376_D	380_R	1.085	1.00
172_D	176_D	1.085	1.00
400_A	404_D	1.081	1.00
69_D	73_Y	1.081	1.00
280_E	284_E	1.078	1.00
406_A	410_K	1.072	1.00
408_I	411_R	1.072	1.00
475_A	483_E	1.064	1.00
148_I	152_D	1.064	1.00
350_L	354_I	1.063	1.00
106_E	109_L	1.062	1.00
301_D	304_I	1.061	1.00
209_N	212_K	1.060	1.00
458_V	462_R	1.057	1.00
383_R	387_E	1.054	1.00
99_L	102_Y	1.053	1.00
421_E	425_E	1.050	1.00
306_K	309_A	1.050	1.00
308_R	312_I	1.048	1.00
269_E	272_L	1.048	1.00
149_N	153_E	1.043	1.00
281_E	284_E	1.042	1.00
264_D	268_L	1.041	1.00
475_A	478_L	1.037	1.00
449_L	453_V	1.035	1.00
360_K	364_L	1.035	1.00
21_K	24_T	1.034	1.00
374_Q	378_L	1.031	1.00
115_S	123_F	1.029	1.00
201_Q	205_N	1.027	1.00
456_L	460_Y	1.023	1.00
322_L	326_L	1.023	1.00
207_I	211_I	1.021	1.00
211_I	214_K	1.020	1.00
237_S	241_P	1.017	1.00
145_T	149_N	1.014	1.00
401_T	405_S	1.013	1.00
188_I	191_K	1.013	1.00
229_E	236_E	1.009	1.00
355_A	358_K	1.007	1.00
380_R	384_E	1.004	1.00
160_N	163_E	1.003	1.00
86_E	92_M	1.001	1.00
249_K	252_E	1.000	1.00
273_K	277_R	0.998	1.00
420_E	423_E	0.998	1.00
9_G	43_S	0.997	1.00
356_K	359_A	0.994	1.00
5_V	40_S	0.991	1.00
388_R	392_S	0.990	1.00
203_K	207_I	0.988	1.00
208_L	211_I	0.985	1.00
214_K	218_L	0.985	1.00
479_L	482_F	0.982	1.00
275_L	278_V	0.980	1.00
387_E	390_S	0.977	1.00
188_I	192_T	0.977	1.00
407_S	410_K	0.975	1.00
164_I	168_I	0.975	1.00
281_E	285_S	0.972	1.00
339_E	342_L	0.970	1.00
474_I	477_Q	0.969	1.00
366_N	369_G	0.967	1.00
415_L	418_K	0.966	1.00
259_K	262_T	0.963	1.00
19_L	24_T	0.961	1.00
448_Q	452_K	0.959	1.00
331_I	334_Q	0.954	1.00
216_D	219_A	0.954	1.00
10_G	36_S	0.954	1.00
238_K	241_P	0.953	1.00
171_I	175_I	0.952	1.00
362_E	366_N	0.950	1.00
402_N	405_S	0.949	1.00
387_E	391_K	0.947	1.00
433_S	437_E	0.946	1.00
378_L	381_Q	0.944	1.00
390_S	394_S	0.944	1.00
55_L	58_F	0.943	1.00
332_G	335_K	0.943	1.00
399_I	403_D	0.943	1.00
105_P	110_V	0.942	1.00
400_A	403_D	0.941	1.00
251_M	255_N	0.941	1.00
318_D	321_S	0.940	1.00
371_V	375_I	0.939	1.00
129_K	132_E	0.938	1.00
325_S	328_N	0.937	1.00
409_L	413_E	0.937	1.00
144_L	148_I	0.935	1.00
466_K	469_E	0.935	1.00
167_K	170_A	0.934	1.00
468_R	479_L	0.934	1.00
86_E	91_I	0.933	1.00
259_K	263_N	0.931	1.00
279_L	283_N	0.930	1.00
440_K	444_E	0.930	1.00
403_D	407_S	0.928	1.00
205_N	209_N	0.926	1.00
277_R	280_E	0.925	1.00
431_I	435_I	0.925	1.00
237_S	240_S	0.924	1.00
446_I	449_L	0.921	1.00
210_K	214_K	0.921	1.00
435_I	438_E	0.918	1.00
349_T	352_N	0.917	1.00
338_E	342_L	0.915	1.00
87_E	91_I	0.914	1.00
445_H	449_L	0.914	1.00
444_E	447_E	0.913	1.00
295_V	299_K	0.913	1.00
217_E	221_L	0.911	1.00
105_P	111_T	0.906	1.00
119_N	122_W	0.905	1.00
163_E	167_K	0.904	1.00
152_D	155_Q	0.902	1.00
384_E	387_E	0.900	1.00
442_K	446_I	0.899	1.00
401_T	404_D	0.898	1.00
417_K	420_E	0.898	1.00
433_S	436_L	0.898	1.00
459_E	462_R	0.897	1.00
326_L	330_I	0.895	1.00
115_S	118_G	0.892	1.00
131_N	135_A	0.890	1.00
116_G	119_N	0.887	1.00
98_L	101_T	0.887	1.00
350_L	353_E	0.886	1.00
5_V	37_L	0.886	1.00
366_N	370_S	0.885	1.00
362_E	365_I	0.885	1.00
9_G	46_T	0.885	1.00
159_N	162_R	0.883	1.00
169_R	172_D	0.883	1.00
9_G	42_I	0.882	1.00
257_K	261_K	0.882	1.00
341_D	345_K	0.881	1.00
185_S	188_I	0.880	1.00
263_N	266_S	0.880	1.00
355_A	359_A	0.879	1.00
190_A	194_Y	0.879	1.00
380_R	383_R	0.879	1.00
153_E	157_K	0.878	1.00
354_I	357_L	0.876	1.00
83_G	90_L	0.874	1.00
478_L	482_F	0.873	1.00
385_T	388_R	0.871	1.00
348_Q	351_E	0.870	1.00
175_I	179_E	0.869	1.00
353_E	357_L	0.866	1.00
83_G	86_E	0.865	1.00
452_K	459_E	0.862	1.00
204_I	208_L	0.862	1.00
339_E	343_R	0.857	1.00
439_L	442_K	0.856	1.00
40_S	44_L	0.855	1.00
480_K	484_F	0.854	1.00
472_N	475_A	0.854	1.00
113_I	116_G	0.854	1.00
207_I	210_K	0.853	1.00
388_R	391_K	0.852	1.00
363_E	366_N	0.851	1.00
230_E	233_Q	0.851	1.00
143_L	147_E	0.850	1.00
202_N	206_E	0.850	1.00
7_N	27_E	0.850	1.00
86_E	93_D	0.849	1.00
11_I	15_Y	0.849	1.00
317_R	321_S	0.844	1.00
327_R	330_I	0.840	1.00
370_S	373_F	0.839	1.00
346_E	350_L	0.836	1.00
460_Y	464_L	0.836	1.00
8_I	30_N	0.835	1.00
165_Q	169_R	0.831	1.00
473_R	477_Q	0.830	1.00
96_R	99_L	0.827	1.00
276_E	280_E	0.826	1.00
329_D	333_L	0.825	1.00
145_T	148_I	0.825	1.00
245_T	249_K	0.825	1.00
84_L	91_I	0.816	1.00
425_E	428_L	0.813	1.00
430_G	433_S	0.810	1.00
437_E	440_K	0.809	1.00
250_E	254_I	0.808	1.00
448_Q	451_K	0.807	1.00
282_V	285_S	0.806	1.00
140_L	143_L	0.804	1.00
412_I	415_L	0.803	1.00
220_N	223_F	0.803	1.00
447_E	451_K	0.803	1.00
422_Y	426_L	0.802	1.00
224_A	228_I	0.798	1.00
199_T	202_N	0.797	1.00
28_A	32_Y	0.796	1.00
419_R	422_Y	0.795	1.00
3_V	19_L	0.793	1.00
480_K	483_E	0.792	1.00
109_L	112_Q	0.791	1.00
200_R	208_L	0.788	1.00
260_L	263_N	0.787	1.00
222_E	225_L	0.787	1.00
225_L	228_I	0.786	1.00
245_T	248_E	0.786	1.00
262_T	265_R	0.785	1.00
348_Q	352_N	0.785	1.00
358_K	361_K	0.782	1.00
471_F	478_L	0.781	1.00
247_L	250_E	0.778	1.00
474_I	482_F	0.778	1.00
185_S	189_V	0.777	1.00
443_E	446_I	0.774	1.00
477_Q	480_K	0.772	1.00
134_K	139_E	0.772	1.00
402_N	406_A	0.766	1.00
342_L	345_K	0.765	1.00
136_K	139_E	0.760	1.00
305_W	308_R	0.760	1.00
84_L	93_D	0.760	1.00
233_Q	237_S	0.759	1.00
391_K	394_S	0.758	1.00
436_L	439_L	0.756	1.00
404_D	407_S	0.755	1.00
454_D	458_V	0.753	1.00
253_E	256_E	0.752	1.00
218_L	221_L	0.751	1.00
130_I	133_I	0.750	1.00
84_L	87_E	0.747	1.00
205_N	208_L	0.747	1.00
41_L	66_A	0.743	1.00
181_E	184_S	0.743	1.00
56_N	59_A	0.740	1.00
261_K	264_D	0.739	1.00
378_L	382_R	0.737	1.00
424_Y	427_Q	0.736	1.00
99_L	104_S	0.735	1.00
168_I	172_D	0.734	1.00
229_E	232_I	0.729	1.00
312_I	316_L	0.727	1.00
159_N	163_E	0.725	1.00
227_K	230_E	0.725	1.00
106_E	110_V	0.724	1.00
428_L	431_I	0.724	1.00
444_E	448_Q	0.723	1.00
328_N	331_I	0.719	1.00
467_A	474_I	0.719	1.00
258_L	261_K	0.718	1.00
469_E	483_E	0.716	1.00
31_A	43_S	0.715	1.00
204_I	211_I	0.713	1.00
223_F	227_K	0.712	1.00
340_I	344_L	0.711	1.00
87_E	93_D	0.709	1.00
481_R	484_F	0.709	1.00
323_L	330_I	0.708	1.00
146_A	149_N	0.708	1.00
454_D	457_Q	0.706	1.00
85_G	90_L	0.705	1.00
474_I	478_L	0.703	1.00
108_R	111_T	0.702	1.00
10_G	38_V	0.702	1.00
381_Q	385_T	0.701	1.00
156_K	160_N	0.701	1.00
255_N	258_L	0.701	1.00
223_F	226_K	0.700	1.00
434_S	437_E	0.695	1.00
432_P	439_L	0.694	1.00
92_M	95_D	0.691	0.99
347_L	354_I	0.690	0.99
435_I	439_L	0.690	0.99
452_K	455_E	0.690	0.99
98_L	104_S	0.688	0.99
475_A	482_F	0.687	0.99
89_N	92_M	0.687	0.99
244_K	248_E	0.687	0.99
379_E	383_R	0.683	0.99
120_V	124_I	0.681	0.99
192_T	195_T	0.681	0.99
109_L	114_L	0.680	0.99
470_E	478_L	0.679	0.99
228_I	232_I	0.679	0.99
278_V	282_V	0.679	0.99
453_V	456_L	0.678	0.99
108_R	113_I	0.678	0.99
152_D	156_K	0.677	0.99
389_F	392_S	0.674	0.99
200_R	204_I	0.673	0.99
365_I	368_I	0.672	0.99
76_R	80_I	0.671	0.99
389_F	393_E	0.669	0.99
56_N	61_S	0.667	0.99
106_E	111_T	0.666	0.99
427_Q	430_G	0.666	0.99
461_I	464_L	0.662	0.99
231_E	235_K	0.662	0.99
336_R	340_I	0.662	0.99
467_A	479_L	0.661	0.99
458_V	461_I	0.660	0.99
297_G	300_V	0.658	0.99
375_I	378_L	0.658	0.99
10_G	27_E	0.656	0.99
331_I	335_K	0.656	0.99
221_L	225_L	0.652	0.99
202_N	205_N	0.652	0.99
121_E	125_S	0.650	0.99
249_K	253_E	0.649	0.99
290_L	293_C	0.648	0.99
300_V	303_S	0.647	0.99
27_E	46_T	0.645	0.99
55_L	59_A	0.642	0.99
116_G	120_V	0.642	0.99
469_E	473_R	0.642	0.99
93_D	96_R	0.642	0.99
372_K	375_I	0.641	0.99
161_I	165_Q	0.640	0.99
44_L	64_V	0.639	0.99
291_D	295_V	0.638	0.99
397_G	401_T	0.636	0.99
239_V	243_I	0.635	0.99
469_E	472_N	0.635	0.99
39_R	124_I	0.635	0.99
439_L	446_I	0.633	0.99
62_G	66_A	0.631	0.99
215_K	218_L	0.631	0.99
470_E	474_I	0.631	0.99
162_R	165_Q	0.630	0.99
10_G	31_A	0.630	0.99
24_T	43_S	0.628	0.99
87_E	92_M	0.627	0.99
465_T	478_L	0.627	0.99
369_G	373_F	0.626	0.99
83_G	88_K	0.625	0.99
177_K	181_E	0.625	0.99
255_N	262_T	0.624	0.99
472_N	479_L	0.623	0.99
246_Q	249_K	0.620	0.99
23_V	43_S	0.618	0.99
183_E	187_N	0.616	0.99
271_E	278_V	0.616	0.99
299_K	303_S	0.615	0.99
84_L	92_M	0.615	0.99
471_F	474_I	0.613	0.99
143_L	146_A	0.610	0.99
419_R	423_E	0.610	0.99
367_R	371_V	0.609	0.99
42_I	46_T	0.607	0.99
96_R	102_Y	0.606	0.99
20_E	24_T	0.605	0.99
308_R	315_E	0.604	0.99
478_L	483_E	0.604	0.99
149_N	152_D	0.604	0.99
184_S	187_N	0.602	0.99
471_F	482_F	0.602	0.99
11_I	37_L	0.601	0.99
105_P	112_Q	0.599	0.99
302_P	305_W	0.598	0.99
236_E	239_V	0.597	0.99
181_E	185_S	0.590	0.98
27_E	31_A	0.590	0.98
147_E	151_R	0.588	0.98
262_T	269_E	0.588	0.98
468_R	472_N	0.587	0.98
455_E	458_V	0.587	0.98
468_R	474_I	0.586	0.98
418_K	422_Y	0.585	0.98
153_E	156_K	0.583	0.98
97_A	101_T	0.582	0.98
36_S	46_T	0.578	0.98
5_V	11_I	0.575	0.98
42_I	49_I	0.569	0.98
46_T	49_I	0.568	0.98
358_K	365_I	0.568	0.98
68_L	73_Y	0.565	0.98
449_L	452_K	0.564	0.98
429_L	432_P	0.564	0.98
456_L	463_R	0.563	0.98
268_L	271_E	0.563	0.98
459_E	464_L	0.563	0.98
25_S	39_R	0.560	0.98
256_E	259_K	0.559	0.98
179_E	182_R	0.559	0.98
29_P	39_R	0.559	0.98
460_Y	467_A	0.553	0.98
478_L	481_R	0.550	0.97
56_N	60_D	0.550	0.97
330_I	333_L	0.549	0.97
160_N	164_I	0.549	0.97
162_R	166_A	0.547	0.97
352_N	355_A	0.547	0.97
187_N	190_A	0.546	0.97
86_E	89_N	0.545	0.97
476_N	483_E	0.543	0.97
150_A	153_E	0.541	0.97
35_T	43_S	0.539	0.97
128_S	132_E	0.537	0.97
463_R	467_A	0.535	0.97
41_L	45_L	0.534	0.97
425_E	429_L	0.534	0.97
391_K	397_G	0.534	0.97
467_A	482_F	0.533	0.97
288_H	291_D	0.533	0.97
475_A	481_R	0.532	0.97
174_E	178_L	0.532	0.97
112_Q	116_G	0.532	0.97
63_Y	66_A	0.530	0.97
468_R	478_L	0.528	0.97
139_E	142_K	0.527	0.97
357_L	364_L	0.526	0.97
385_T	392_S	0.524	0.97
178_L	182_R	0.522	0.97
24_T	42_I	0.522	0.97
42_I	114_L	0.522	0.97
471_F	483_E	0.519	0.96
169_R	173_E	0.517	0.96
83_G	87_E	0.516	0.96
323_L	326_L	0.515	0.96
441_E	448_Q	0.515	0.96
178_L	181_E	0.515	0.96
17_L	37_L	0.513	0.96
9_G	48_S	0.513	0.96
211_I	218_L	0.512	0.96
377_D	380_R	0.508	0.96
63_Y	76_R	0.508	0.96
471_F	479_L	0.508	0.96
32_Y	35_T	0.508	0.96
107_N	110_V	0.507	0.96
108_R	112_Q	0.507	0.96
476_N	482_F	0.506	0.96
113_I	124_I	0.506	0.96
31_A	46_T	0.506	0.96
10_G	24_T	0.506	0.96
164_I	167_K	0.505	0.96
191_K	194_Y	0.504	0.96
248_E	251_M	0.504	0.96
10_G	39_R	0.503	0.96
295_V	298_S	0.503	0.96
27_E	39_R	0.503	0.96
423_E	427_Q	0.502	0.96
8_I	39_R	0.502	0.96
467_A	471_F	0.501	0.96
474_I	483_E	0.501	0.96
101_T	104_S	0.501	0.96
138_E	141_Q	0.500	0.96

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4ux3A	1	0.6763	100	0.517	Contact Map
3auyA	2	0.569	100	0.551	Contact Map
4ad8A	1	0.6576	100	0.557	Contact Map
3zgxA	2	0.5451	100	0.564	Contact Map
1w1wA	2	0.506	100	0.609	Contact Map
3qf7A	2	0.5486	100	0.629	Contact Map
3qktA	2	0.5145	100	0.636	Contact Map
4abyA	1	0.5315	100	0.643	Contact Map
4i99A	2	0.4719	100	0.662	Contact Map
3qksA	1	0.2981	99.9	0.712	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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