Q97WE3 - SULSO - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

Q97WE3 - NADH oxidase

UniProt:	Q97WE3	Sequences: MERLIIIGGGAAGMTAASWVRRLKPNMHVTVFESTKMVSHAPCGIPYFTEGLFDDENLFMTYTPEYFIEKRKINVKTNSKVEEVDLRSRIVVVRENQEKRKYEFDYLLFSTGARPKKINAEGDRIFYVHHPAEASYIRQKLWSFNRIAIIGGGILGIEMAEALRARGKKIVLIHRGRYLLNKMLDEDMGKIVTDKVESEIELKLNESLVSVIEEGRVVITDKGKYDVDATVVAIGVEPNIDLVKDQLKIGQTGAIWADNHMRTSVENVYAAGDSTESINIITKKPDWVPFAPVANKMGFVAGNNIGGKDVTFPGVVGTMITKFEEFIIGKTGVTENEAKRYNIKTVSAIVHHKTRARYYPGSKDIIVKLIAEADTMRIIGAQIVGEEEVLGRLNMMAAVIQKGFTAEDLFFVETGYVPPVNRVWDVVTLAARKLFSGISGE	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	441 (400)
Sequences:	17855 (11879)
Seq/√Len:	594.0

ECOLI - STHA RCLA DLDH GSHR HCAD NIRB NORW DHNA AHPF
BACSU - DLDH2 DLDH1 DLDH3 NASB NASD YJLD YUTJ YUMB DHNA
HALSA - DLDH Q9HSN0 Q9HP48 Q9HR27
SULSO - Q97WE3 Q97VD9 Q97XZ3 Q97Z19 Q97YT2 Q97Y24 Q97VQ4 Q97WG1 Q97VJ3 Q97U72 Q97W27

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
148_A	227_V	4.449	1.00
258_D	262_R	3.947	1.00
34_S	80_K	3.769	1.00
146_R	169_K	3.330	1.00
171_V	203_K	3.076	1.00
248_K	256_W	2.916	1.00
169_K	201_E	2.869	1.00
381_A	396_M	2.850	1.00
193_T	197_E	2.758	1.00
114_R	241_D	2.571	1.00
90_I	101_K	2.554	1.00
344_K	374_D	2.542	1.00
395_M	414_T	2.468	1.00
3_R	28_H	2.391	1.00
104_F	107_L	2.382	1.00
16_A	108_L	2.378	1.00
121_E	210_S	2.367	1.00
114_R	239_N	2.358	1.00
116_K	237_E	2.353	1.00
89_R	267_N	2.348	1.00
344_K	373_A	2.319	1.00
372_E	375_T	2.283	1.00
143_S	168_K	2.264	1.00
92_V	101_K	2.196	1.00
5_I	102_Y	2.174	1.00
376_M	407_E	2.165	1.00
106_Y	267_N	2.161	1.00
148_A	173_I	2.160	1.00
32_F	102_Y	2.147	1.00
4_L	20_V	2.084	1.00
94_R	99_K	2.080	1.00
250_G	254_A	2.074	1.00
377_R	403_G	2.063	1.00
30_T	76_K	2.061	1.00
12_A	271_A	2.039	1.00
301_A	305_I	2.038	1.00
186_E	336_N	2.027	1.00
146_R	228_D	2.026	1.00
92_V	99_K	2.016	1.00
346_V	373_A	2.012	1.00
5_I	91_V	2.008	1.00
5_I	32_F	1.978	1.00
333_V	338_A	1.959	1.00
177_R	205_N	1.934	1.00
157_I	172_L	1.899	1.00
399_V	404_F	1.892	1.00
130_H	133_E	1.879	1.00
85_D	88_S	1.872	1.00
90_I	103_E	1.871	1.00
383_I	389_V	1.858	1.00
175_R	207_S	1.826	1.00
114_R	237_E	1.808	1.00
242_L	245_D	1.803	1.00
333_V	341_Y	1.794	1.00
262_R	266_E	1.783	1.00
248_K	264_S	1.727	1.00
164_R	169_K	1.707	1.00
3_R	105_D	1.701	1.00
108_L	305_I	1.683	1.00
209_V	218_V	1.676	1.00
147_I	168_K	1.674	1.00
345_T	370_I	1.668	1.00
133_E	136_Y	1.639	1.00
203_K	206_E	1.623	1.00
206_E	221_D	1.601	1.00
171_V	201_E	1.599	1.00
82_E	92_V	1.594	1.00
335_E	339_K	1.593	1.00
369_L	381_A	1.593	1.00
269_Y	304_N	1.588	1.00
210_S	218_V	1.585	1.00
195_K	198_S	1.585	1.00
85_D	90_I	1.566	1.00
336_N	340_R	1.564	1.00
111_T	274_S	1.558	1.00
5_I	104_F	1.557	1.00
164_R	200_I	1.549	1.00
5_I	30_T	1.540	1.00
327_I	390_L	1.538	1.00
147_I	163_L	1.528	1.00
178_Y	189_G	1.523	1.00
30_T	102_Y	1.507	1.00
28_H	74_N	1.492	1.00
4_L	27_M	1.481	1.00
108_L	271_A	1.480	1.00
216_R	226_D	1.469	1.00
405_T	408_D	1.468	1.00
185_D	368_K	1.466	1.00
95_E	100_R	1.461	1.00
63_T	67_F	1.445	1.00
262_R	267_N	1.437	1.00
109_F	274_S	1.435	1.00
186_E	190_K	1.423	1.00
131_P	134_A	1.407	1.00
260_H	304_N	1.385	1.00
19_W	303_N	1.384	1.00
157_I	324_E	1.373	1.00
106_Y	305_I	1.373	1.00
261_M	275_T	1.371	1.00
207_S	220_T	1.360	1.00
335_E	368_K	1.358	1.00
129_H	137_I	1.356	1.00
126_F	129_H	1.337	1.00
145_N	228_D	1.333	1.00
191_I	384_V	1.333	1.00
203_K	223_G	1.329	1.00
12_A	294_A	1.329	1.00
338_A	345_T	1.319	1.00
62_Y	66_Y	1.318	1.00
265_V	268_V	1.318	1.00
129_H	133_E	1.318	1.00
131_P	135_S	1.316	1.00
212_I	218_V	1.315	1.00
343_I	379_I	1.308	1.00
66_Y	70_K	1.307	1.00
259_N	311_T	1.305	1.00
187_D	349_I	1.303	1.00
3_R	30_T	1.302	1.00
174_H	204_L	1.293	1.00
55_D	59_F	1.286	1.00
194_D	197_E	1.275	1.00
145_N	169_K	1.257	1.00
178_Y	186_E	1.256	1.00
47_Y	50_E	1.245	1.00
298_G	302_G	1.238	1.00
338_A	370_I	1.236	1.00
209_V	220_T	1.234	1.00
64_P	67_F	1.234	1.00
4_L	108_L	1.229	1.00
337_E	340_R	1.224	1.00
83_E	92_V	1.223	1.00
129_H	134_A	1.222	1.00
68_I	71_R	1.206	1.00
76_K	100_R	1.200	1.00
63_T	66_Y	1.200	1.00
344_K	372_E	1.193	1.00
193_T	202_L	1.193	1.00
152_G	179_L	1.191	1.00
150_I	230_T	1.190	1.00
255_I	274_S	1.184	1.00
65_E	69_E	1.182	1.00
218_V	224_K	1.181	1.00
7_I	109_F	1.166	1.00
89_R	93_V	1.165	1.00
193_T	204_L	1.159	1.00
132_A	135_S	1.158	1.00
32_F	93_V	1.151	1.00
146_R	226_D	1.148	1.00
106_Y	269_Y	1.144	1.00
369_L	396_M	1.142	1.00
80_K	94_R	1.140	1.00
125_I	128_V	1.138	1.00
23_L	303_N	1.136	1.00
211_V	230_T	1.134	1.00
6_I	17_A	1.132	1.00
76_K	102_Y	1.132	1.00
302_G	306_G	1.130	1.00
402_K	408_D	1.123	1.00
173_I	225_Y	1.123	1.00
115_P	118_I	1.122	1.00
147_I	229_A	1.117	1.00
125_I	133_E	1.113	1.00
46_P	49_T	1.111	1.00
146_R	171_V	1.107	1.00
134_A	137_I	1.106	1.00
261_M	301_A	1.105	1.00
206_E	220_T	1.104	1.00
352_H	385_G	1.096	1.00
93_V	102_Y	1.095	1.00
328_I	384_V	1.095	1.00
347_S	370_I	1.094	1.00
203_K	225_Y	1.092	1.00
7_I	81_V	1.084	1.00
135_S	138_R	1.082	1.00
219_I	223_G	1.080	1.00
184_L	320_I	1.080	1.00
219_I	222_K	1.079	1.00
188_M	366_I	1.077	1.00
247_L	265_V	1.077	1.00
188_M	384_V	1.076	1.00
55_D	58_L	1.075	1.00
194_D	198_S	1.073	1.00
335_E	345_T	1.073	1.00
190_K	193_T	1.070	1.00
184_L	330_K	1.069	1.00
125_I	129_H	1.059	1.00
150_I	232_V	1.059	1.00
128_V	131_P	1.057	1.00
372_E	377_R	1.053	1.00
349_I	366_I	1.051	1.00
303_N	308_K	1.047	1.00
335_E	347_S	1.045	1.00
388_E	391_G	1.044	1.00
82_E	85_D	1.040	1.00
320_I	330_K	1.039	1.00
396_M	424_W	1.037	1.00
32_F	81_V	1.036	1.00
119_N	122_G	1.030	1.00
128_V	211_V	1.028	1.00
129_H	229_A	1.028	1.00
187_D	368_K	1.026	1.00
197_E	201_E	1.026	1.00
212_I	216_R	1.025	1.00
257_A	270_A	1.024	1.00
123_D	128_V	1.019	1.00
83_E	245_D	1.018	1.00
32_F	76_K	1.014	1.00
157_I	196_V	1.013	1.00
367_V	423_V	1.013	1.00
394_N	416_Y	1.013	1.00
271_A	301_A	1.009	1.00
124_R	129_H	1.008	1.00
259_N	312_F	1.005	1.00
152_G	174_H	1.003	1.00
172_L	202_L	1.002	1.00
198_S	364_D	1.001	1.00
65_E	77_T	0.995	1.00
123_D	126_F	0.994	1.00
329_G	393_L	0.993	1.00
23_L	306_G	0.988	1.00
262_R	304_N	0.987	1.00
247_L	255_I	0.987	1.00
178_Y	193_T	0.987	1.00
134_A	138_R	0.986	1.00
148_A	225_Y	0.983	1.00
20_V	302_G	0.981	1.00
95_E	99_K	0.975	1.00
321_T	416_Y	0.974	1.00
130_H	135_S	0.974	1.00
54_D	58_L	0.971	1.00
67_F	71_R	0.970	1.00
19_W	23_L	0.968	1.00
301_A	304_N	0.966	1.00
404_F	408_D	0.966	1.00
124_R	128_V	0.962	1.00
376_M	406_A	0.958	1.00
132_A	136_Y	0.956	1.00
192_V	384_V	0.955	1.00
64_P	68_I	0.954	1.00
251_Q	256_W	0.954	1.00
192_V	328_I	0.952	1.00
339_K	345_T	0.947	1.00
76_K	81_V	0.946	1.00
16_A	301_A	0.943	1.00
35_T	45_I	0.941	1.00
300_V	304_N	0.941	1.00
262_R	265_V	0.936	1.00
173_I	206_E	0.935	1.00
161_E	165_A	0.930	1.00
257_A	275_T	0.927	1.00
78_N	81_V	0.925	1.00
27_M	105_D	0.922	1.00
68_I	73_I	0.922	1.00
128_V	134_A	0.921	1.00
250_G	276_E	0.920	1.00
137_I	229_A	0.919	1.00
16_A	298_G	0.915	1.00
46_P	50_E	0.914	1.00
220_T	223_G	0.912	1.00
346_V	376_M	0.911	1.00
131_P	138_R	0.905	1.00
252_T	276_E	0.904	1.00
134_A	163_L	0.903	1.00
333_V	337_E	0.902	1.00
367_V	383_I	0.900	1.00
191_I	195_K	0.898	1.00
249_I	256_W	0.895	1.00
19_W	22_R	0.891	1.00
256_W	264_S	0.891	1.00
240_I	249_I	0.891	1.00
394_N	421_N	0.890	1.00
349_I	368_K	0.890	1.00
176_G	181_N	0.890	1.00
177_R	186_E	0.886	1.00
317_G	400_I	0.884	1.00
116_K	234_I	0.884	1.00
63_T	68_I	0.884	1.00
9_G	31_V	0.880	1.00
150_I	208_L	0.875	1.00
81_V	85_D	0.874	1.00
338_A	343_I	0.874	1.00
174_H	181_N	0.872	1.00
250_G	256_W	0.872	1.00
188_M	382_Q	0.870	1.00
321_T	390_L	0.870	1.00
238_P	254_A	0.867	1.00
334_T	337_E	0.866	1.00
85_D	89_R	0.865	1.00
156_G	174_H	0.861	1.00
127_Y	229_A	0.861	1.00
146_R	168_K	0.856	1.00
260_H	309_D	0.854	1.00
329_G	389_V	0.854	1.00
27_M	306_G	0.853	1.00
38_V	75_V	0.853	1.00
149_I	156_G	0.853	1.00
206_E	223_G	0.852	1.00
179_L	204_L	0.849	1.00
255_I	270_A	0.848	1.00
243_V	247_L	0.848	1.00
14_M	31_V	0.847	1.00
270_A	274_S	0.841	1.00
262_R	269_Y	0.838	1.00
241_D	244_K	0.836	1.00
190_K	194_D	0.833	1.00
148_A	217_V	0.833	1.00
129_H	132_A	0.832	1.00
107_L	268_V	0.829	1.00
108_L	301_A	0.827	1.00
191_I	194_D	0.826	1.00
45_I	132_A	0.823	1.00
261_M	304_N	0.821	1.00
337_E	341_Y	0.818	1.00
30_T	74_N	0.816	1.00
195_K	364_D	0.815	1.00
113_A	236_V	0.814	1.00
160_A	172_L	0.814	1.00
146_R	227_V	0.814	1.00
147_I	231_V	0.813	1.00
179_L	202_L	0.813	1.00
343_I	372_E	0.813	1.00
150_I	234_I	0.812	1.00
82_E	94_R	0.811	1.00
173_I	203_K	0.808	1.00
335_E	370_I	0.807	1.00
178_Y	336_N	0.804	1.00
331_T	400_I	0.804	1.00
179_L	193_T	0.802	1.00
119_N	123_D	0.802	1.00
216_R	224_K	0.800	1.00
395_M	398_A	0.799	1.00
5_I	107_L	0.798	1.00
18_S	71_R	0.797	1.00
296_K	299_F	0.796	1.00
263_T	270_A	0.783	1.00
378_I	396_M	0.780	1.00
257_A	261_M	0.779	1.00
118_I	232_V	0.779	1.00
16_A	302_G	0.779	1.00
27_M	305_I	0.779	1.00
348_A	427_V	0.779	1.00
63_T	71_R	0.778	1.00
19_W	302_G	0.777	1.00
52_L	58_L	0.771	1.00
20_V	305_I	0.771	1.00
372_E	379_I	0.769	1.00
195_K	384_V	0.768	1.00
149_I	231_V	0.768	1.00
27_M	106_Y	0.764	1.00
300_V	313_P	0.763	1.00
68_I	75_V	0.762	1.00
206_E	219_I	0.758	1.00
116_K	119_N	0.756	1.00
212_I	224_K	0.755	1.00
15_T	295_N	0.753	1.00
247_L	264_S	0.753	1.00
171_V	227_V	0.749	1.00
399_V	409_L	0.749	1.00
83_E	107_L	0.748	1.00
62_Y	65_E	0.748	1.00
88_S	101_K	0.748	1.00
3_R	27_M	0.747	1.00
144_F	168_K	0.745	1.00
21_R	73_I	0.744	1.00
66_Y	69_E	0.743	1.00
24_K	27_M	0.740	1.00
9_G	33_E	0.738	1.00
9_G	38_V	0.738	1.00
343_I	370_I	0.736	1.00
381_A	400_I	0.735	1.00
327_I	388_E	0.735	1.00
123_D	127_Y	0.734	1.00
21_R	29_V	0.733	1.00
16_A	271_A	0.729	1.00
219_I	225_Y	0.728	1.00
314_G	401_Q	0.727	1.00
130_H	134_A	0.726	1.00
178_Y	190_K	0.723	1.00
93_V	100_R	0.723	1.00
331_T	381_A	0.723	1.00
312_F	315_V	0.722	1.00
20_V	27_M	0.722	1.00
184_L	328_I	0.721	1.00
196_V	200_I	0.720	1.00
107_L	267_N	0.719	1.00
160_A	200_I	0.718	1.00
179_L	189_G	0.717	1.00
404_F	409_L	0.716	1.00
74_N	100_R	0.715	1.00
196_V	202_L	0.712	1.00
117_K	232_V	0.712	1.00
346_V	371_A	0.711	1.00
278_I	318_T	0.710	1.00
377_R	405_T	0.709	1.00
175_R	181_N	0.707	1.00
18_S	22_R	0.703	1.00
17_A	73_I	0.702	1.00
52_L	55_D	0.700	1.00
20_V	306_G	0.698	1.00
90_I	93_V	0.696	1.00
120_A	208_L	0.695	1.00
254_A	289_P	0.694	1.00
51_G	54_D	0.694	1.00
207_S	218_V	0.694	1.00
81_V	84_V	0.692	1.00
62_Y	67_F	0.689	1.00
369_L	427_V	0.688	1.00
378_I	400_I	0.687	1.00
154_I	322_K	0.684	1.00
254_A	276_E	0.684	1.00
355_R	359_Y	0.683	1.00
31_V	68_I	0.683	1.00
246_Q	265_V	0.682	1.00
23_L	308_K	0.681	1.00
356_A	359_Y	0.681	1.00
34_S	239_N	0.680	1.00
19_W	299_F	0.677	1.00
3_R	102_Y	0.676	1.00
271_A	298_G	0.676	1.00
406_A	410_F	0.674	1.00
42_P	47_Y	0.673	1.00
125_I	211_V	0.672	1.00
137_I	163_L	0.671	1.00
50_E	159_M	0.671	1.00
13_G	17_A	0.670	1.00
185_D	382_Q	0.669	1.00
139_Q	229_A	0.667	1.00
401_Q	411_F	0.663	1.00
334_T	382_Q	0.660	1.00
331_T	397_A	0.658	1.00
398_A	404_F	0.658	1.00
36_K	78_N	0.657	1.00
132_A	137_I	0.656	1.00
52_L	56_E	0.654	1.00
6_I	16_A	0.652	1.00
163_L	168_K	0.650	1.00
398_A	402_K	0.649	1.00
240_I	274_S	0.648	1.00
162_A	166_R	0.647	1.00
355_R	358_Y	0.646	1.00
408_D	411_F	0.646	1.00
117_K	130_H	0.645	1.00
396_M	400_I	0.642	1.00
78_N	93_V	0.641	1.00
218_V	222_K	0.641	1.00
110_S	271_A	0.640	1.00
77_T	81_V	0.639	1.00
192_V	324_E	0.637	1.00
375_T	403_G	0.634	1.00
6_I	13_G	0.634	1.00
303_N	307_G	0.634	1.00
157_I	179_L	0.631	1.00
214_E	226_D	0.630	1.00
338_A	379_I	0.629	1.00
191_I	366_I	0.628	1.00
398_A	409_L	0.627	1.00
351_H	354_T	0.627	1.00
78_N	82_E	0.625	1.00
89_R	103_E	0.625	1.00
363_K	386_E	0.625	1.00
124_R	127_Y	0.624	1.00
165_A	325_E	0.623	1.00
180_L	192_V	0.622	1.00
397_A	401_Q	0.622	1.00
20_V	29_V	0.621	1.00
68_I	72_K	0.621	1.00
249_I	253_G	0.621	1.00
45_I	49_T	0.618	1.00
417_V	422_R	0.615	1.00
261_M	300_V	0.615	1.00
173_I	219_I	0.615	1.00
211_V	232_V	0.611	1.00
383_I	392_R	0.611	1.00
132_A	138_R	0.611	1.00
47_Y	52_L	0.607	1.00
369_L	378_I	0.605	1.00
128_V	135_S	0.605	1.00
44_G	47_Y	0.602	1.00
259_N	277_S	0.602	1.00
293_V	318_T	0.601	1.00
188_M	191_I	0.601	1.00
352_H	423_V	0.600	1.00
345_T	379_I	0.599	1.00
4_L	302_G	0.599	1.00
157_I	202_L	0.598	1.00
188_M	328_I	0.596	1.00
240_I	254_A	0.594	1.00
218_V	223_G	0.593	1.00
348_A	371_A	0.592	1.00
89_R	265_V	0.591	1.00
125_I	130_H	0.590	1.00
385_G	389_V	0.588	1.00
80_K	83_E	0.587	1.00
128_V	133_E	0.586	1.00
104_F	265_V	0.585	1.00
50_E	54_D	0.585	1.00
131_P	137_I	0.583	1.00
371_A	406_A	0.582	1.00
65_E	68_I	0.580	1.00
381_A	393_L	0.580	1.00
370_I	373_A	0.578	1.00
156_G	233_A	0.578	1.00
249_I	254_A	0.578	1.00
296_K	425_D	0.577	1.00
159_M	162_A	0.577	1.00
74_N	77_T	0.574	1.00
129_H	135_S	0.574	1.00
189_G	193_T	0.573	1.00
391_G	421_N	0.573	1.00
356_A	360_P	0.572	1.00
61_T	165_A	0.572	1.00
154_I	320_I	0.570	1.00
67_F	70_K	0.569	1.00
325_E	386_E	0.569	1.00
398_A	412_V	0.569	1.00
159_M	231_V	0.568	1.00
171_V	225_Y	0.567	1.00
104_F	267_N	0.566	1.00
85_D	92_V	0.564	1.00
297_M	315_V	0.561	1.00
84_V	109_F	0.560	1.00
54_D	162_A	0.559	0.99
4_L	305_I	0.559	0.99
50_E	162_A	0.559	0.99
293_V	297_M	0.558	0.99
362_S	386_E	0.557	0.99
93_V	99_K	0.557	0.99
209_V	219_I	0.557	0.99
123_D	129_H	0.556	0.99
133_E	137_I	0.556	0.99
156_G	175_R	0.555	0.99
269_Y	305_I	0.554	0.99
64_P	69_E	0.554	0.99
149_I	160_A	0.553	0.99
327_I	420_V	0.553	0.99
17_A	31_V	0.552	0.99
226_D	229_A	0.549	0.99
381_A	424_W	0.544	0.99
88_S	267_N	0.544	0.99
63_T	70_K	0.544	0.99
271_A	305_I	0.543	0.99
126_F	133_E	0.543	0.99
255_I	263_T	0.543	0.99
146_R	164_R	0.542	0.99
94_R	100_R	0.542	0.99
12_A	110_S	0.540	0.99
252_T	256_W	0.537	0.99
17_A	29_V	0.536	0.99
401_Q	412_V	0.536	0.99
4_L	16_A	0.535	0.99
351_H	364_D	0.534	0.99
161_E	196_V	0.534	0.99
88_S	93_V	0.533	0.99
351_H	366_I	0.532	0.99
303_N	311_T	0.531	0.99
51_G	55_D	0.531	0.99
23_L	302_G	0.529	0.99
184_L	322_K	0.528	0.99
307_G	312_F	0.528	0.99
241_D	245_D	0.527	0.99
120_A	123_D	0.527	0.99
106_Y	262_R	0.526	0.99
67_F	72_K	0.526	0.99
69_E	72_K	0.526	0.99
395_M	421_N	0.524	0.99
251_Q	254_A	0.524	0.99
244_K	249_I	0.523	0.99
273_D	294_A	0.521	0.99
105_D	267_N	0.520	0.99
333_V	343_I	0.519	0.99
247_L	268_V	0.519	0.99
147_I	170_I	0.518	0.99
9_G	39_S	0.517	0.99
400_I	404_F	0.517	0.99
303_N	310_V	0.515	0.99
295_N	425_D	0.514	0.99
131_P	136_Y	0.513	0.99
336_N	339_K	0.513	0.99
127_Y	130_H	0.512	0.99
227_V	230_T	0.512	0.99
47_Y	51_G	0.512	0.99
371_A	376_M	0.510	0.99
3_R	103_E	0.510	0.99
164_R	199_E	0.509	0.99
407_E	411_F	0.509	0.99
78_N	94_R	0.509	0.99
394_N	397_A	0.509	0.99
350_V	354_T	0.509	0.99
146_R	229_A	0.508	0.99
84_V	92_V	0.508	0.99
71_R	76_K	0.508	0.99
56_E	60_M	0.507	0.99
372_E	376_M	0.507	0.99
15_T	298_G	0.505	0.99
40_H	43_C	0.504	0.99
334_T	370_I	0.504	0.99
36_K	77_T	0.504	0.99
371_A	378_I	0.503	0.99
160_A	170_I	0.502	0.99
409_L	412_V	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3iwaA	2	0.8662	100	0.237	Contact Map
1ojtA	2	0.9524	100	0.237	Contact Map
2cduA	2	0.9955	100	0.242	Contact Map
3oc4A	2	0.9456	100	0.242	Contact Map
1xdiA	3	0.941	100	0.245	Contact Map
3ladA	2	0.9456	100	0.25	Contact Map
3ic9A	2	0.9365	100	0.251	Contact Map
3cgbA	2	0.9773	100	0.251	Contact Map
3icsA	2	0.9977	100	0.252	Contact Map
3ntdA	2	0.9955	100	0.253	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.024 seconds.