Q97WD4 - SULSO - GREMLIN Contacts

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Q97WD4 - Amino acid transporter, putative

UniProt:	Q97WD4	Sequences: MERKQVFVRETSGLIKHVSLTDAVMLNIANMSIGIALFQSISPYITRGGVLWIASLIGLFLALPQALVYTIFNRKIGRTGGDYVWISRNLDGAIGTIFAVAYLLESTAFYAIISFFSASSVNSVLLTIGYLNHQNSLIYIAENVIVNPYATPTFQQRLIFYGISAFAFAIIVLINILHSKWGYKLVTGLGMFSMLTVILAMIVMAINAKRFDSLVLPLLKDFNVTVSSNLPKTILPYSISIPATLFLLPLFALYTYPWMNAGPAVSSEYRGDRVSKLNVFLSLLITGIFVTIGFLEMDLIAGYYFNLNAFPSAIYNFWTVAMALSLNPIIEWILGLGLIMWNYYVLSYGVLVFSRYVFALSFDRVFPEKFSQLNANGSPVYAHVFDLTLTLLFLLIPVFSIDAAVSLYGASIVGMLYFLAVGISAIIFGRKIRSGLMKIAGILMTVYFVYLTYEAARNPLFGFSTTSGVNVTTLSFVLGSFIAGIVIWNITRYVNSKKGIDLSLTFKEIPPE	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	512 (425)
Sequences:	24834 (16372)
Seq/√Len:	794.1

ECOLI - PLAP ANSP PROY LYSP POTE PUUP GABP AROP FRLA ADIC YIFK MMUP PHEP CYCA ARCD YBAT GADC YJEM CADB YGJI YCAM YJEH
BACSU - YBGF YBXG YDGF YHDG HUTM YVBW GABP YTNA AAPA ASPP ARCD ROCC YFNA STET ROCE YBEC YCGH YECA YDAO GERAB GERBB YNDE GERKB
HALSA - Q9HHU7 Q9HQB3 Q9HSL5
SULSO - Q97WD4 Q97U33 Q97VR4 Q97VA6 Q97VA8 Q97U05 Q97XM0 Q97ZB5 Q7LXI7 Q97Z63 Q97X49 Q97WS3 Q97YN3 Q97Y76 Q97YX9 Q97U39

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
172_V	387_L	4.359	1.00
369_K	381_Y	4.279	1.00
427_I	431_K	3.464	1.00
59_L	287_G	3.211	1.00
273_R	277_L	3.103	1.00
372_Q	381_Y	3.102	1.00
419_L	450_Y	2.929	1.00
19_S	270_R	2.897	1.00
83_Y	363_D	2.877	1.00
269_Y	274_V	2.768	1.00
99_A	360_L	2.702	1.00
204_M	296_E	2.641	1.00
361_S	371_S	2.619	1.00
374_N	380_V	2.617	1.00
329_I	333_I	2.573	1.00
165_A	391_L	2.557	1.00
437_M	440_A	2.529	1.00
71_I	429_G	2.478	1.00
267_S	362_F	2.473	1.00
24_V	281_L	2.469	1.00
202_I	206_I	2.466	1.00
20_L	281_L	2.396	1.00
369_K	372_Q	2.357	1.00
384_V	388_T	2.343	1.00
268_E	355_R	2.264	1.00
87_S	95_G	2.198	1.00
172_V	383_H	2.172	1.00
20_L	274_V	2.150	1.00
173_L	177_L	2.117	1.00
23_A	269_Y	2.117	1.00
422_G	449_V	2.108	1.00
20_L	24_V	2.104	1.00
447_Y	451_L	2.090	1.00
358_F	362_F	2.087	1.00
180_K	184_K	2.063	1.00
90_L	427_I	2.042	1.00
165_A	394_L	2.030	1.00
176_I	380_V	2.029	1.00
169_A	391_L	2.008	1.00
486_V	490_I	1.991	1.00
164_S	394_L	1.971	1.00
103_L	386_D	1.964	1.00
68_V	422_G	1.961	1.00
87_S	92_G	1.953	1.00
42_S	51_L	1.950	1.00
14_L	373_L	1.946	1.00
60_F	64_P	1.934	1.00
364_R	368_E	1.929	1.00
277_L	281_L	1.904	1.00
19_S	22_D	1.893	1.00
370_F	385_F	1.876	1.00
191_M	195_L	1.854	1.00
175_N	347_S	1.810	1.00
280_F	284_L	1.804	1.00
90_L	423_I	1.796	1.00
100_V	484_G	1.790	1.00
374_N	378_S	1.790	1.00
86_I	98_F	1.728	1.00
22_D	187_T	1.725	1.00
302_G	305_F	1.724	1.00
470_N	473_T	1.714	1.00
480_S	484_G	1.711	1.00
271_G	274_V	1.693	1.00
491_T	495_N	1.689	1.00
50_V	244_T	1.683	1.00
441_G	445_T	1.678	1.00
27_N	282_S	1.677	1.00
195_L	199_L	1.669	1.00
478_L	482_I	1.656	1.00
320_V	323_A	1.656	1.00
451_L	455_A	1.655	1.00
114_S	346_L	1.651	1.00
427_I	430_R	1.645	1.00
169_A	387_L	1.643	1.00
110_Y	390_T	1.642	1.00
98_F	420_A	1.637	1.00
316_N	320_V	1.635	1.00
444_M	448_F	1.625	1.00
18_V	22_D	1.624	1.00
176_I	384_V	1.622	1.00
439_I	442_I	1.620	1.00
168_F	390_T	1.615	1.00
305_F	324_L	1.602	1.00
91_D	94_I	1.591	1.00
121_V	163_I	1.590	1.00
24_V	285_I	1.587	1.00
284_L	288_I	1.582	1.00
214_L	217_P	1.553	1.00
194_M	198_I	1.543	1.00
381_Y	385_F	1.525	1.00
271_G	277_L	1.523	1.00
114_S	168_F	1.522	1.00
213_S	216_L	1.516	1.00
205_A	296_E	1.506	1.00
196_T	337_G	1.495	1.00
265_V	351_L	1.486	1.00
54_A	247_L	1.463	1.00
479_G	483_A	1.463	1.00
117_S	339_I	1.462	1.00
237_Y	240_S	1.462	1.00
168_F	387_L	1.457	1.00
433_R	436_L	1.456	1.00
79_T	267_S	1.452	1.00
90_L	94_I	1.442	1.00
432_I	435_G	1.417	1.00
58_G	252_A	1.415	1.00
353_F	386_D	1.413	1.00
14_L	358_F	1.399	1.00
358_F	373_L	1.396	1.00
15_I	377_G	1.394	1.00
423_I	427_I	1.392	1.00
447_Y	458_N	1.391	1.00
357_V	382_A	1.380	1.00
66_A	283_L	1.376	1.00
217_P	220_K	1.362	1.00
455_A	459_P	1.356	1.00
22_D	183_Y	1.353	1.00
482_I	486_V	1.351	1.00
332_W	336_L	1.350	1.00
423_I	450_Y	1.336	1.00
490_I	494_V	1.333	1.00
117_S	167_A	1.333	1.00
468_G	471_V	1.332	1.00
165_A	169_A	1.329	1.00
18_V	183_Y	1.326	1.00
354_S	383_H	1.322	1.00
449_V	453_Y	1.318	1.00
368_E	372_Q	1.318	1.00
453_Y	456_A	1.316	1.00
172_V	384_V	1.308	1.00
18_V	23_A	1.305	1.00
368_E	371_S	1.292	1.00
454_E	458_N	1.289	1.00
303_Y	306_N	1.287	1.00
357_V	366_F	1.282	1.00
86_I	420_A	1.281	1.00
323_A	331_E	1.273	1.00
65_Q	422_G	1.268	1.00
491_T	494_V	1.268	1.00
93_A	491_T	1.261	1.00
61_L	452_T	1.253	1.00
66_A	279_V	1.252	1.00
240_S	243_A	1.250	1.00
89_N	424_S	1.249	1.00
372_Q	380_V	1.247	1.00
456_A	459_P	1.246	1.00
60_F	448_F	1.244	1.00
20_L	277_L	1.243	1.00
67_L	280_F	1.240	1.00
52_W	295_L	1.239	1.00
201_M	292_I	1.227	1.00
274_V	277_L	1.226	1.00
113_I	345_V	1.209	1.00
490_I	493_Y	1.208	1.00
84_V	88_R	1.203	1.00
76_I	88_R	1.191	1.00
208_A	299_L	1.190	1.00
471_V	474_L	1.187	1.00
373_L	377_G	1.187	1.00
37_L	116_F	1.186	1.00
171_I	346_L	1.185	1.00
31_M	286_T	1.178	1.00
64_P	448_F	1.178	1.00
288_I	292_I	1.175	1.00
28_I	285_I	1.175	1.00
43_P	51_L	1.167	1.00
23_A	278_N	1.165	1.00
21_T	25_M	1.165	1.00
404_A	409_G	1.158	1.00
78_R	84_V	1.155	1.00
487_I	491_T	1.154	1.00
469_V	472_T	1.153	1.00
162_G	166_F	1.152	1.00
200_A	204_M	1.150	1.00
174_I	185_L	1.147	1.00
489_N	493_Y	1.145	1.00
485_I	489_N	1.136	1.00
492_R	495_N	1.132	1.00
204_M	300_I	1.130	1.00
103_L	357_V	1.127	1.00
477_V	481_F	1.127	1.00
176_I	378_S	1.125	1.00
215_V	220_K	1.120	1.00
205_A	209_K	1.117	1.00
27_N	262_G	1.116	1.00
404_A	407_L	1.116	1.00
161_Y	165_A	1.115	1.00
381_Y	384_V	1.115	1.00
186_V	347_S	1.114	1.00
455_A	458_N	1.114	1.00
69_Y	82_D	1.108	1.00
487_I	490_I	1.098	1.00
320_V	324_L	1.096	1.00
270_R	274_V	1.095	1.00
215_V	218_L	1.090	1.00
166_F	170_I	1.089	1.00
83_Y	359_A	1.085	1.00
450_Y	454_E	1.077	1.00
185_L	189_L	1.076	1.00
73_N	85_W	1.076	1.00
199_L	203_V	1.074	1.00
71_I	74_R	1.072	1.00
388_T	392_L	1.072	1.00
96_T	100_V	1.069	1.00
362_F	371_S	1.067	1.00
26_L	265_V	1.064	1.00
474_L	477_V	1.063	1.00
430_R	433_R	1.062	1.00
172_V	176_I	1.055	1.00
176_I	374_N	1.052	1.00
86_I	94_I	1.050	1.00
118_A	164_S	1.045	1.00
444_M	447_Y	1.029	1.00
198_I	202_I	1.027	1.00
118_A	163_I	1.025	1.00
184_K	188_G	1.024	1.00
419_L	454_E	1.023	1.00
216_L	219_L	1.018	1.00
471_V	475_S	1.017	1.00
257_P	414_G	1.013	1.00
442_I	446_V	1.007	1.00
214_L	218_L	1.006	1.00
445_T	449_V	0.997	1.00
88_R	432_I	0.993	1.00
17_H	270_R	0.993	1.00
316_N	322_M	0.992	1.00
75_K	435_G	0.988	1.00
426_I	447_Y	0.979	1.00
443_L	447_Y	0.979	1.00
266_S	275_S	0.976	1.00
169_A	173_L	0.976	1.00
438_K	441_G	0.976	1.00
59_L	256_Y	0.972	1.00
121_V	125_L	0.969	1.00
213_S	217_P	0.969	1.00
479_G	482_I	0.968	1.00
446_V	460_L	0.967	1.00
68_V	446_V	0.965	1.00
475_S	479_G	0.964	1.00
446_V	449_V	0.956	1.00
350_V	387_L	0.955	1.00
56_L	291_T	0.951	1.00
121_V	339_I	0.944	1.00
260_N	264_A	0.943	1.00
215_V	219_L	0.942	1.00
194_M	289_F	0.939	1.00
444_M	458_N	0.939	1.00
429_G	433_R	0.938	1.00
323_A	328_P	0.928	1.00
171_I	347_S	0.925	1.00
179_S	351_L	0.920	1.00
443_L	446_V	0.918	1.00
170_I	343_Y	0.917	1.00
474_L	478_L	0.914	1.00
271_G	276_K	0.908	1.00
473_T	477_V	0.905	1.00
75_K	433_R	0.905	1.00
189_L	344_Y	0.904	1.00
118_A	160_F	0.902	1.00
14_L	355_R	0.899	1.00
488_W	492_R	0.895	1.00
112_I	254_Y	0.894	1.00
425_A	446_V	0.893	1.00
326_L	330_I	0.892	1.00
483_A	486_V	0.890	1.00
412_I	477_V	0.890	1.00
217_P	221_D	0.889	1.00
446_V	458_N	0.886	1.00
17_H	180_K	0.886	1.00
449_V	456_A	0.885	1.00
78_R	88_R	0.885	1.00
80_G	84_V	0.883	1.00
372_Q	375_A	0.881	1.00
212_D	216_L	0.881	1.00
28_I	286_T	0.880	1.00
56_L	60_F	0.879	1.00
232_K	236_P	0.876	1.00
201_M	296_E	0.873	1.00
168_F	394_L	0.872	1.00
317_F	320_V	0.870	1.00
193_S	341_W	0.869	1.00
437_M	441_G	0.869	1.00
276_K	279_V	0.866	1.00
287_G	291_T	0.866	1.00
442_I	445_T	0.866	1.00
366_F	370_F	0.865	1.00
216_L	220_K	0.863	1.00
328_P	332_W	0.863	1.00
483_A	487_I	0.862	1.00
404_A	408_Y	0.856	1.00
22_D	184_K	0.853	1.00
209_K	213_S	0.853	1.00
406_S	409_G	0.852	1.00
456_A	460_L	0.851	1.00
470_N	474_L	0.851	1.00
445_T	459_P	0.850	1.00
93_A	485_I	0.849	1.00
52_W	298_D	0.848	1.00
437_M	442_I	0.846	1.00
419_L	423_I	0.843	1.00
213_S	220_K	0.840	1.00
14_L	268_E	0.839	1.00
302_G	324_L	0.838	1.00
87_S	363_D	0.838	1.00
439_I	443_L	0.838	1.00
472_T	475_S	0.837	1.00
441_G	444_M	0.836	1.00
173_L	176_I	0.834	1.00
484_G	487_I	0.834	1.00
117_S	342_N	0.833	1.00
370_F	381_Y	0.832	1.00
86_I	424_S	0.830	1.00
295_L	299_L	0.827	1.00
472_T	476_F	0.827	1.00
213_S	218_L	0.826	1.00
380_V	384_V	0.825	1.00
261_A	352_V	0.824	1.00
25_M	187_T	0.823	1.00
201_M	205_A	0.821	1.00
53_I	244_T	0.820	1.00
161_Y	394_L	0.816	1.00
450_Y	458_N	0.812	1.00
100_V	366_F	0.811	1.00
63_L	280_F	0.810	1.00
212_D	215_V	0.808	1.00
20_L	278_N	0.808	1.00
316_N	319_T	0.808	1.00
117_S	343_Y	0.807	1.00
21_T	187_T	0.804	1.00
317_F	322_M	0.801	1.00
387_L	391_L	0.801	1.00
163_I	166_F	0.801	1.00
327_N	330_I	0.800	1.00
91_D	492_R	0.800	1.00
479_G	486_V	0.797	1.00
241_I	244_T	0.792	1.00
50_V	237_Y	0.789	1.00
318_W	322_M	0.789	1.00
305_F	308_N	0.784	1.00
208_A	296_E	0.782	1.00
449_V	452_T	0.781	1.00
476_F	479_G	0.779	1.00
64_P	68_V	0.775	1.00
24_V	278_N	0.772	1.00
452_T	456_A	0.769	1.00
309_A	320_V	0.768	1.00
275_S	279_V	0.768	1.00
94_I	420_A	0.768	1.00
475_S	478_L	0.765	1.00
484_G	488_W	0.765	1.00
218_L	221_D	0.763	1.00
206_I	209_K	0.763	1.00
257_P	418_F	0.762	1.00
35_I	293_G	0.753	1.00
93_A	97_I	0.752	1.00
102_Y	106_S	0.749	1.00
424_S	428_F	0.748	1.00
243_A	246_F	0.747	1.00
479_G	484_G	0.747	1.00
281_L	285_I	0.746	1.00
175_N	383_H	0.744	1.00
445_T	452_T	0.744	1.00
80_G	83_Y	0.742	1.00
107_T	389_L	0.741	1.00
446_V	452_T	0.741	1.00
171_I	350_V	0.738	1.00
453_Y	460_L	0.738	1.00
17_H	179_S	0.736	1.00
469_V	474_L	0.736	1.00
29_A	190_G	0.733	1.00
63_L	67_L	0.732	1.00
177_L	181_W	0.731	1.00
214_L	220_K	0.730	1.00
413_V	417_Y	0.729	1.00
374_N	377_G	0.728	1.00
263_P	279_V	0.728	1.00
439_I	446_V	0.725	1.00
350_V	354_S	0.723	1.00
53_I	56_L	0.723	1.00
426_I	430_R	0.722	1.00
53_I	57_I	0.721	1.00
83_Y	87_S	0.716	1.00
453_Y	458_N	0.714	1.00
101_A	417_Y	0.714	1.00
235_L	238_S	0.714	1.00
31_M	282_S	0.713	1.00
437_M	443_L	0.713	1.00
52_W	291_T	0.713	1.00
32_S	290_V	0.712	1.00
109_F	410_A	0.712	1.00
232_K	235_L	0.712	1.00
183_Y	347_S	0.707	1.00
213_S	219_L	0.706	1.00
357_V	385_F	0.705	1.00
205_A	292_I	0.704	1.00
469_V	473_T	0.704	1.00
292_I	296_E	0.702	1.00
480_S	487_I	0.699	1.00
445_T	448_F	0.698	1.00
488_W	495_N	0.694	1.00
478_L	481_F	0.693	1.00
72_F	425_A	0.693	1.00
69_Y	421_V	0.688	1.00
448_F	459_P	0.687	1.00
448_F	452_T	0.686	1.00
126_L	129_G	0.684	1.00
354_S	382_A	0.684	1.00
118_A	121_V	0.683	1.00
89_N	427_I	0.679	1.00
409_G	413_V	0.679	1.00
179_S	265_V	0.677	1.00
300_I	321_A	0.676	1.00
125_L	129_G	0.675	1.00
468_G	474_L	0.675	1.00
21_T	184_K	0.674	1.00
175_N	351_L	0.673	1.00
490_I	495_N	0.673	1.00
485_I	488_W	0.673	1.00
233_T	236_P	0.673	1.00
369_K	385_F	0.673	1.00
440_A	444_M	0.672	1.00
51_L	294_F	0.672	1.00
473_T	476_F	0.672	1.00
388_T	391_L	0.670	1.00
303_Y	307_L	0.668	1.00
375_A	380_V	0.667	1.00
183_Y	187_T	0.667	1.00
243_A	247_L	0.666	1.00
322_M	325_S	0.666	1.00
441_G	446_V	0.665	1.00
471_V	484_G	0.662	1.00
329_I	332_W	0.662	1.00
446_V	453_Y	0.661	1.00
105_E	414_G	0.660	1.00
293_G	318_W	0.659	1.00
237_Y	244_T	0.657	1.00
176_I	383_H	0.656	1.00
39_Q	294_F	0.655	1.00
79_T	358_F	0.655	1.00
125_L	128_I	0.655	1.00
90_L	424_S	0.653	1.00
290_V	294_F	0.651	1.00
184_K	187_T	0.650	1.00
241_I	245_L	0.650	1.00
457_R	460_L	0.650	1.00
121_V	167_A	0.648	1.00
83_Y	95_G	0.646	1.00
451_L	454_E	0.646	1.00
487_I	493_Y	0.646	1.00
471_V	477_V	0.643	1.00
281_L	284_L	0.643	1.00
470_N	477_V	0.640	1.00
62_A	259_M	0.640	1.00
425_A	429_G	0.640	1.00
109_F	112_I	0.640	1.00
293_G	297_M	0.638	1.00
212_D	218_L	0.638	1.00
161_Y	164_S	0.637	1.00
64_P	445_T	0.637	1.00
234_I	237_Y	0.637	1.00
52_W	56_L	0.636	1.00
109_F	113_I	0.635	1.00
285_I	289_F	0.635	1.00
395_L	398_V	0.631	1.00
479_G	490_I	0.630	1.00
72_F	85_W	0.630	1.00
111_A	393_F	0.628	1.00
24_V	27_N	0.628	1.00
304_Y	308_N	0.627	1.00
488_W	494_V	0.627	1.00
245_L	455_A	0.626	1.00
370_F	382_A	0.626	1.00
376_N	380_V	0.625	1.00
201_M	293_G	0.625	1.00
488_W	491_T	0.625	1.00
355_R	358_F	0.624	1.00
426_I	446_V	0.623	1.00
127_T	130_Y	0.623	1.00
405_V	408_Y	0.622	1.00
422_G	450_Y	0.621	1.00
350_V	383_H	0.618	1.00
124_V	336_L	0.618	1.00
430_R	443_L	0.618	1.00
165_A	395_L	0.617	1.00
181_W	184_K	0.614	1.00
82_D	264_A	0.614	1.00
285_I	288_I	0.614	1.00
341_W	344_Y	0.614	1.00
306_N	309_A	0.613	1.00
486_V	489_N	0.612	1.00
28_I	190_G	0.611	1.00
72_F	89_N	0.611	1.00
472_T	477_V	0.610	1.00
120_S	338_L	0.610	1.00
480_S	483_A	0.608	1.00
441_G	447_Y	0.608	1.00
257_P	260_N	0.608	1.00
71_I	75_K	0.607	1.00
267_S	358_F	0.606	1.00
450_Y	459_P	0.605	1.00
470_N	476_F	0.605	1.00
455_A	460_L	0.605	1.00
115_F	406_S	0.605	1.00
123_S	335_G	0.604	1.00
167_A	346_L	0.603	1.00
319_T	323_A	0.602	1.00
438_K	442_I	0.601	1.00
66_A	259_M	0.600	1.00
273_R	276_K	0.599	1.00
481_F	484_G	0.598	1.00
106_S	349_G	0.597	1.00
476_F	480_S	0.597	1.00
89_N	428_F	0.597	1.00
83_Y	99_A	0.595	1.00
446_V	456_A	0.595	1.00
428_F	432_I	0.593	1.00
82_D	260_N	0.593	1.00
234_I	240_S	0.592	1.00
48_G	298_D	0.591	1.00
322_M	326_L	0.591	1.00
264_A	352_V	0.590	1.00
419_L	453_Y	0.588	1.00
245_L	249_P	0.588	1.00
452_T	458_N	0.587	1.00
181_W	185_L	0.587	1.00
473_T	480_S	0.586	1.00
37_L	40_S	0.585	1.00
203_V	207_N	0.585	1.00
441_G	458_N	0.584	1.00
55_S	255_T	0.583	1.00
113_I	346_L	0.582	1.00
268_E	379_P	0.582	1.00
483_A	491_T	0.580	1.00
171_I	343_Y	0.579	1.00
23_A	274_V	0.576	1.00
296_E	299_L	0.576	1.00
449_V	460_L	0.575	1.00
168_F	391_L	0.574	1.00
70_T	74_R	0.574	1.00
200_A	322_M	0.574	1.00
170_I	174_I	0.573	1.00
73_N	263_P	0.573	1.00
36_A	197_V	0.573	1.00
451_L	458_N	0.573	1.00
450_Y	460_L	0.572	1.00
208_A	300_I	0.571	1.00
203_V	322_M	0.571	1.00
192_F	196_T	0.570	1.00
307_L	310_F	0.568	1.00
448_F	451_L	0.568	1.00
36_A	193_S	0.568	1.00
445_T	458_N	0.567	1.00
91_D	95_G	0.566	1.00
66_A	70_T	0.566	1.00
73_N	275_S	0.565	1.00
212_D	217_P	0.563	1.00
443_L	460_L	0.562	1.00
65_Q	453_Y	0.560	1.00
111_A	390_T	0.560	1.00
442_I	447_Y	0.559	1.00
355_R	379_P	0.559	1.00
477_V	482_I	0.558	1.00
169_A	384_V	0.558	1.00
177_L	376_N	0.557	1.00
489_N	492_R	0.557	1.00
414_G	417_Y	0.556	1.00
169_A	172_V	0.556	1.00
47_R	50_V	0.555	1.00
215_V	299_L	0.554	1.00
317_F	321_A	0.553	1.00
471_V	478_L	0.553	1.00
187_T	191_M	0.553	1.00
379_P	382_A	0.552	1.00
242_P	246_F	0.551	1.00
392_L	395_L	0.551	1.00
23_A	265_V	0.551	1.00
361_S	370_F	0.551	1.00
30_N	261_A	0.551	1.00
166_F	169_A	0.549	1.00
272_D	277_L	0.548	1.00
71_I	437_M	0.548	1.00
182_G	351_L	0.548	1.00
214_L	219_L	0.547	1.00
17_H	21_T	0.545	1.00
453_Y	457_R	0.545	1.00
203_V	327_N	0.545	1.00
446_V	450_Y	0.543	1.00
446_V	459_P	0.543	1.00
440_A	443_L	0.543	1.00
70_T	276_K	0.541	1.00
353_F	357_V	0.541	1.00
192_F	337_G	0.539	1.00
385_F	389_L	0.537	1.00
468_G	472_T	0.537	1.00
27_N	278_N	0.537	1.00
322_M	327_N	0.535	1.00
81_G	263_P	0.534	1.00
468_G	473_T	0.533	1.00
441_G	460_L	0.532	1.00
447_Y	450_Y	0.532	1.00
257_P	410_A	0.531	1.00
449_V	459_P	0.531	1.00
262_G	275_S	0.528	1.00
317_F	325_S	0.527	1.00
65_Q	260_N	0.526	1.00
236_P	240_S	0.526	1.00
269_Y	275_S	0.523	1.00
172_V	350_V	0.522	1.00
471_V	479_G	0.521	1.00
58_G	256_Y	0.521	1.00
70_T	279_V	0.519	1.00
57_I	248_L	0.515	1.00
209_K	215_V	0.515	1.00
268_E	373_L	0.515	1.00
452_T	455_A	0.515	1.00
21_T	24_V	0.514	1.00
101_A	105_E	0.514	1.00
27_N	31_M	0.514	1.00
186_V	344_Y	0.514	1.00
336_L	340_M	0.514	1.00
178_H	181_W	0.512	1.00
452_T	459_P	0.511	1.00
63_L	284_L	0.511	1.00
448_F	458_N	0.511	1.00
190_G	193_S	0.511	1.00
209_K	214_L	0.509	1.00
43_P	47_R	0.508	1.00
426_I	443_L	0.507	1.00
482_I	485_I	0.505	1.00
19_S	180_K	0.504	1.00
487_I	494_V	0.504	1.00
355_R	373_L	0.503	1.00
34_G	254_Y	0.502	1.00
114_S	118_A	0.501	1.00
204_M	208_A	0.501	1.00
428_F	433_R	0.501	1.00
14_L	79_T	0.500	1.00
55_S	294_F	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3l1lA	2	0.8164	100	0.383	Contact Map
3giaA	1	0.832	100	0.423	Contact Map
4djkA	2	0.834	100	0.433	Contact Map
3dh4A	3	0.8633	99	0.863	Contact Map
2xq2A	2	0.8652	99	0.863	Contact Map
2jlnA	1	0.8184	98.7	0.877	Contact Map
4xp4A	1	0.9219	98.5	0.885	Contact Map
2a65A	2	0.8926	98.5	0.886	Contact Map
4wgvA	2	0.7305	98.1	0.898	Contact Map
4us3A	1	0.8027	97.9	0.902	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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