Q97VY1 - SULSO - GREMLIN Contacts

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Q97VY1 - Deoxyribodipyrimidine photolyase (DNA photolyase) (Photoreactivating enzyme). (PhrB)

UniProt:	Q97VY1	Sequences: MLCLFIFRRDLRLDDNTGLIKALEDCEKVIPAFILDPRQVGNENEYKSEFAINFMINSLNELNDELRKRGSRLYVYFGLAEEVIKNLLKDVDAVYLNEDYTPFSKMRDERIRKYCEDTGKIMKSFEDYLLTSKNDFKNYRNFTTFYNVVKNKQIKKPVQNNYTNYYKNSLGDEHELPPRQGERGGRKEGIKLIERARQINYDRKDFVAEDNRTFLSPHLKFGTLSIREVYYSLLDSQAIIRQLYWRDFYTLLAYYNERVFHEPLKREYNCIEWENNERLFQAWLEGKTGYPIIDAGMRQLNRTGDMPNRVRMLTAFFLVKVLIIDWRIGEKYFASKLIDYDPSVNNGNWQWIASVGTDYIFRVFDPWKQQVTYDPEAKYIKRWVDELESYDAEIIHNAYKYTLKSYPKPIVDWRIRVNLAKRLYEVCRKSKIK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	433 (420)
Sequences:	4506 (3421)
Seq/√Len:	166.9

ECOLI - PHR
HALSA - PHR Q9HP89
SULSO - Q97VY1

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
218_H	223_T	3.937	1.00
292_I	313_L	3.637	1.00
276_N	279_L	3.562	1.00
280_F	328_I	3.454	1.00
301_N	332_Y	3.450	1.00
321_V	416_R	3.323	1.00
281_Q	285_E	3.314	1.00
280_F	284_L	3.262	1.00
263_P	269_N	3.168	1.00
298_R	386_E	2.999	1.00
282_A	410_I	2.819	1.00
296_G	310_V	2.816	1.00
63_N	67_R	2.783	1.00
321_V	413_W	2.733	1.00
58_S	223_T	2.614	1.00
370_Q	380_I	2.511	1.00
95_Y	125_F	2.510	1.00
381_K	392_A	2.500	1.00
418_N	422_R	2.468	1.00
301_N	336_K	2.457	1.00
63_N	72_R	2.438	1.00
371_V	397_N	2.429	1.00
14_D	228_E	2.377	1.00
238_A	241_R	2.363	1.00
96_L	122_M	2.361	1.00
61_E	183_R	2.325	1.00
7_F	31_P	2.254	1.00
397_N	400_K	2.253	1.00
96_L	124_S	2.205	1.00
16_N	97_N	2.197	1.00
274_E	279_L	2.193	1.00
78_G	83_V	2.169	1.00
290_Y	317_F	2.165	1.00
249_Y	348_N	2.161	1.00
310_V	379_Y	2.130	1.00
189_G	229_V	2.123	1.00
368_K	372_T	2.120	1.00
94_V	115_C	2.119	1.00
413_W	416_R	2.108	1.00
302_R	383_W	2.055	1.00
370_Q	396_H	2.037	1.00
58_S	181_G	2.013	1.00
5_F	18_G	2.009	1.00
381_K	395_I	1.994	1.00
184_G	187_K	1.988	1.00
332_Y	336_K	1.987	1.00
303_T	383_W	1.974	1.00
417_V	421_K	1.969	1.00
93_A	123_K	1.942	1.00
298_R	384_V	1.942	1.00
290_Y	413_W	1.925	1.00
79_L	82_E	1.923	1.00
394_I	402_T	1.892	1.00
5_F	16_N	1.874	1.00
376_E	392_A	1.872	1.00
281_Q	284_L	1.868	1.00
32_A	87_L	1.855	1.00
232_S	235_D	1.846	1.00
390_Y	401_Y	1.825	1.00
412_D	415_I	1.822	1.00
299_Q	379_Y	1.772	1.00
315_A	352_I	1.737	1.00
414_R	418_N	1.734	1.00
81_E	85_K	1.731	1.00
277_E	328_I	1.724	1.00
318_L	324_I	1.712	1.00
213_T	239_I	1.710	1.00
31_P	71_S	1.682	1.00
274_E	423_L	1.675	1.00
249_Y	347_G	1.664	1.00
7_F	66_L	1.656	1.00
279_L	410_I	1.649	1.00
299_Q	303_T	1.644	1.00
146_Y	241_R	1.626	1.00
334_A	340_Y	1.625	1.00
207_V	310_V	1.622	1.00
230_Y	240_I	1.621	1.00
182_E	228_E	1.617	1.00
215_L	239_I	1.616	1.00
219_L	229_V	1.612	1.00
76_Y	90_D	1.601	1.00
185_G	224_L	1.597	1.00
284_L	335_S	1.595	1.00
146_Y	244_Y	1.591	1.00
65_E	182_E	1.582	1.00
86_N	90_D	1.578	1.00
145_F	251_L	1.572	1.00
391_D	394_I	1.571	1.00
112_R	124_S	1.564	1.00
193_I	197_R	1.561	1.00
83_V	86_N	1.560	1.00
142_F	241_R	1.556	1.00
93_A	121_I	1.556	1.00
363_V	421_K	1.554	1.00
289_G	294_D	1.552	1.00
61_E	65_E	1.538	1.00
76_Y	83_V	1.529	1.00
81_E	110_R	1.520	1.00
282_A	287_K	1.517	1.00
330_E	346_N	1.516	1.00
181_G	185_G	1.514	1.00
181_G	184_G	1.503	1.00
85_K	118_T	1.501	1.00
3_C	95_Y	1.500	1.00
199_I	203_R	1.500	1.00
4_L	91_V	1.500	1.00
186_R	228_E	1.491	1.00
323_I	419_L	1.490	1.00
17_T	127_D	1.477	1.00
20_I	24_E	1.476	1.00
275_N	328_I	1.472	1.00
189_G	232_S	1.451	1.00
228_E	232_S	1.442	1.00
66_L	71_S	1.436	1.00
367_W	399_Y	1.435	1.00
318_L	329_G	1.431	1.00
14_D	186_R	1.428	1.00
88_L	91_V	1.427	1.00
204_K	207_V	1.425	1.00
53_N	57_N	1.423	1.00
55_M	221_F	1.418	1.00
259_V	346_N	1.407	1.00
203_R	209_E	1.393	1.00
9_R	99_D	1.388	1.00
278_R	282_A	1.388	1.00
94_V	122_M	1.381	1.00
419_L	423_L	1.375	1.00
190_I	232_S	1.369	1.00
67_R	72_R	1.367	1.00
33_F	55_M	1.345	1.00
57_N	180_Q	1.344	1.00
238_A	242_Q	1.343	1.00
296_G	379_Y	1.337	1.00
32_A	84_I	1.335	1.00
8_R	108_D	1.334	1.00
367_W	370_Q	1.331	1.00
146_Y	150_K	1.329	1.00
21_K	24_E	1.326	1.00
262_E	269_N	1.321	1.00
149_V	244_Y	1.318	1.00
201_Y	238_A	1.317	1.00
128_Y	250_T	1.313	1.00
252_L	357_T	1.302	1.00
30_I	74_Y	1.296	1.00
32_A	76_Y	1.294	1.00
54_F	218_H	1.276	1.00
280_F	324_I	1.276	1.00
25_D	93_A	1.266	1.00
105_K	254_Y	1.246	1.00
233_L	240_I	1.239	1.00
299_Q	305_D	1.235	1.00
7_F	62_L	1.229	1.00
377_A	381_K	1.203	1.00
23_L	164_N	1.201	1.00
3_C	26_C	1.199	1.00
242_Q	344_V	1.198	1.00
131_T	149_V	1.198	1.00
378_K	381_K	1.196	1.00
203_R	211_N	1.195	1.00
101_T	104_S	1.193	1.00
329_G	349_W	1.192	1.00
284_L	332_Y	1.191	1.00
215_L	229_V	1.188	1.00
89_K	118_T	1.187	1.00
323_I	420_A	1.184	1.00
258_R	262_E	1.183	1.00
14_D	182_E	1.183	1.00
37_P	77_F	1.178	1.00
292_I	370_Q	1.175	1.00
182_E	186_R	1.168	1.00
328_I	331_K	1.166	1.00
65_E	183_R	1.164	1.00
33_F	59_L	1.153	1.00
184_G	188_E	1.152	1.00
105_K	109_E	1.149	1.00
142_F	145_F	1.148	1.00
85_K	88_L	1.134	1.00
293_I	313_L	1.134	1.00
253_A	343_S	1.127	1.00
202_D	205_D	1.125	1.00
13_L	69_R	1.125	1.00
300_L	337_L	1.119	1.00
101_T	342_P	1.117	1.00
368_K	371_V	1.109	1.00
6_I	111_I	1.103	1.00
180_Q	184_G	1.102	1.00
126_E	132_S	1.099	1.00
34_I	84_I	1.091	1.00
82_E	86_N	1.090	1.00
3_C	25_D	1.086	1.00
154_I	157_P	1.085	1.00
322_L	411_V	1.080	1.00
65_E	69_R	1.071	1.00
415_I	419_L	1.069	1.00
394_I	401_Y	1.062	0.99
324_I	328_I	1.062	0.99
181_G	223_T	1.061	0.99
99_D	104_S	1.060	0.99
36_D	39_Q	1.059	0.99
283_W	297_M	1.059	0.99
157_P	161_N	1.059	0.99
214_F	305_D	1.058	0.99
233_L	239_I	1.056	0.99
342_P	346_N	1.055	0.99
155_K	227_R	1.051	0.99
290_Y	321_V	1.036	0.99
280_F	318_L	1.024	0.99
256_N	264_L	1.023	0.99
38_R	79_L	1.014	0.99
139_Y	142_F	1.013	0.99
56_I	60_N	1.009	0.99
50_F	336_K	1.004	0.99
244_Y	247_D	0.993	0.99
65_E	68_K	0.987	0.99
35_L	40_V	0.987	0.99
88_L	120_K	0.986	0.99
96_L	112_R	0.981	0.99
21_K	125_F	0.980	0.99
129_L	250_T	0.980	0.99
54_F	217_P	0.979	0.99
179_R	184_G	0.978	0.99
210_D	214_F	0.976	0.99
54_F	223_T	0.975	0.99
88_L	115_C	0.965	0.99
35_L	59_L	0.962	0.99
285_E	301_N	0.962	0.99
191_K	195_R	0.950	0.99
4_L	88_L	0.949	0.99
138_N	256_N	0.946	0.99
317_F	410_I	0.945	0.99
252_L	259_V	0.944	0.99
150_K	237_Q	0.943	0.99
171_G	175_E	0.942	0.99
380_I	384_V	0.940	0.99
392_A	395_I	0.938	0.99
111_I	115_C	0.937	0.99
85_K	114_Y	0.937	0.99
193_I	233_L	0.934	0.99
30_I	91_V	0.933	0.99
187_K	191_K	0.933	0.99
60_N	64_D	0.933	0.99
212_R	305_D	0.928	0.99
34_I	80_A	0.925	0.99
35_L	75_V	0.924	0.99
23_L	29_V	0.917	0.98
94_V	111_I	0.916	0.98
279_L	419_L	0.916	0.98
217_P	338_I	0.914	0.98
348_N	352_I	0.913	0.98
99_D	107_R	0.912	0.98
309_R	369_Q	0.911	0.98
54_F	58_S	0.909	0.98
31_P	66_L	0.909	0.98
25_D	95_Y	0.908	0.98
98_E	124_S	0.907	0.98
130_L	149_V	0.906	0.98
98_E	126_E	0.900	0.98
298_R	302_R	0.898	0.98
106_M	110_R	0.896	0.98
98_E	132_S	0.892	0.98
80_A	85_K	0.890	0.98
54_F	181_G	0.890	0.98
206_F	209_E	0.889	0.98
419_L	422_R	0.888	0.98
54_F	180_Q	0.887	0.98
85_K	89_K	0.886	0.98
64_D	68_K	0.886	0.98
416_R	419_L	0.885	0.98
174_H	177_P	0.884	0.98
250_T	344_V	0.880	0.98
6_I	80_A	0.879	0.98
100_Y	129_L	0.875	0.98
299_Q	383_W	0.875	0.98
102_P	106_M	0.873	0.98
78_G	82_E	0.870	0.98
4_L	87_L	0.869	0.98
182_E	185_G	0.867	0.98
76_Y	86_N	0.864	0.98
20_I	158_V	0.861	0.98
34_I	83_V	0.861	0.98
260_F	342_P	0.860	0.98
3_C	27_E	0.860	0.98
279_L	282_A	0.859	0.98
97_N	127_D	0.859	0.98
203_R	206_F	0.855	0.98
323_I	423_L	0.855	0.98
134_N	255_Y	0.853	0.98
142_F	146_Y	0.852	0.98
274_E	419_L	0.850	0.97
415_I	418_N	0.850	0.97
137_K	140_R	0.845	0.97
112_R	122_M	0.841	0.97
100_Y	132_S	0.837	0.97
275_N	324_I	0.835	0.97
84_I	87_L	0.835	0.97
242_Q	312_M	0.833	0.97
284_L	328_I	0.832	0.97
35_L	77_F	0.830	0.97
229_V	239_I	0.829	0.97
66_L	73_L	0.825	0.97
215_L	224_L	0.824	0.97
15_D	227_R	0.822	0.97
21_K	25_D	0.821	0.97
259_V	264_L	0.818	0.97
233_L	236_S	0.817	0.97
74_Y	87_L	0.816	0.97
279_L	324_I	0.815	0.97
384_V	406_Y	0.814	0.97
3_C	93_A	0.813	0.97
95_Y	123_K	0.807	0.97
3_C	28_K	0.804	0.96
241_R	245_W	0.798	0.96
204_K	242_Q	0.798	0.96
61_E	64_D	0.797	0.96
17_T	21_K	0.796	0.96
250_T	341_D	0.795	0.96
390_Y	394_I	0.793	0.96
145_F	149_V	0.784	0.96
4_L	32_A	0.784	0.96
157_P	231_Y	0.784	0.96
287_K	384_V	0.781	0.96
266_R	269_N	0.780	0.96
391_D	401_Y	0.778	0.96
109_E	113_K	0.777	0.96
5_F	95_Y	0.776	0.96
80_A	83_V	0.773	0.96
401_Y	405_S	0.771	0.96
370_Q	377_A	0.770	0.95
13_L	66_L	0.768	0.95
291_P	406_Y	0.765	0.95
34_I	78_G	0.765	0.95
46_Y	335_S	0.764	0.95
131_T	244_Y	0.763	0.95
180_Q	186_R	0.762	0.95
88_L	94_V	0.760	0.95
132_S	135_D	0.758	0.95
286_G	297_M	0.757	0.95
351_W	362_R	0.756	0.95
61_E	180_Q	0.755	0.95
394_I	400_K	0.751	0.95
224_L	229_V	0.751	0.95
130_L	230_Y	0.751	0.95
79_L	110_R	0.751	0.95
71_S	166_Y	0.749	0.95
109_E	112_R	0.748	0.95
181_G	186_R	0.746	0.95
61_E	223_T	0.744	0.95
5_F	31_P	0.743	0.95
169_S	172_D	0.742	0.95
139_Y	148_V	0.736	0.94
197_R	233_L	0.731	0.94
154_I	158_V	0.731	0.94
344_V	348_N	0.730	0.94
34_I	88_L	0.726	0.94
296_G	306_M	0.724	0.94
113_K	117_D	0.723	0.94
390_Y	398_A	0.722	0.94
237_Q	241_R	0.721	0.94
241_R	244_Y	0.719	0.94
362_R	369_Q	0.714	0.93
116_E	119_G	0.714	0.93
380_I	395_I	0.708	0.93
58_S	180_Q	0.706	0.93
286_G	384_V	0.703	0.93
180_Q	185_G	0.702	0.93
6_I	96_L	0.701	0.93
290_Y	416_R	0.701	0.93
148_V	151_N	0.700	0.93
291_P	380_I	0.698	0.93
320_K	358_D	0.697	0.92
181_G	189_G	0.694	0.92
161_N	164_N	0.694	0.92
21_K	123_K	0.693	0.92
98_E	134_N	0.690	0.92
273_W	325_D	0.689	0.92
325_D	328_I	0.686	0.92
197_R	236_S	0.684	0.92
189_G	224_L	0.684	0.92
387_L	406_Y	0.684	0.92
112_R	134_N	0.680	0.92
106_M	109_E	0.679	0.91
277_E	281_Q	0.678	0.91
259_V	347_G	0.677	0.91
22_A	95_Y	0.675	0.91
143_T	147_N	0.673	0.91
142_F	150_K	0.672	0.91
18_G	97_N	0.672	0.91
145_F	247_D	0.671	0.91
7_F	13_L	0.671	0.91
234_L	240_I	0.670	0.91
185_G	189_G	0.670	0.91
370_Q	395_I	0.667	0.91
365_D	368_K	0.666	0.91
139_Y	145_F	0.665	0.91
173_E	176_L	0.665	0.91
363_V	420_A	0.662	0.90
150_K	244_Y	0.660	0.90
22_A	29_V	0.660	0.90
39_Q	43_E	0.660	0.90
275_N	280_F	0.659	0.90
86_N	89_K	0.659	0.90
63_N	73_L	0.655	0.90
172_D	175_E	0.654	0.90
298_R	301_N	0.653	0.90
21_K	95_Y	0.652	0.90
4_L	84_I	0.651	0.90
217_P	305_D	0.649	0.90
178_P	217_P	0.647	0.89
377_A	398_A	0.646	0.89
358_D	362_R	0.646	0.89
367_W	371_V	0.645	0.89
297_M	314_T	0.645	0.89
25_D	28_K	0.645	0.89
36_D	80_A	0.643	0.89
290_Y	367_W	0.642	0.89
316_F	352_I	0.641	0.89
204_K	208_A	0.641	0.89
306_M	333_F	0.640	0.89
253_A	259_V	0.640	0.89
299_Q	302_R	0.640	0.89
33_F	39_Q	0.638	0.89
100_Y	133_K	0.638	0.89
196_A	210_D	0.637	0.89
203_R	207_V	0.636	0.89
150_K	241_R	0.635	0.89
391_D	395_I	0.634	0.88
212_R	307_P	0.633	0.88
199_I	202_D	0.633	0.88
13_L	182_E	0.632	0.88
274_E	277_E	0.632	0.88
134_N	254_Y	0.630	0.88
309_R	362_R	0.630	0.88
390_Y	395_I	0.629	0.88
84_I	88_L	0.625	0.88
99_D	220_K	0.622	0.87
231_Y	235_D	0.622	0.87
131_T	136_F	0.621	0.87
286_G	298_R	0.619	0.87
11_L	55_M	0.619	0.87
193_I	232_S	0.615	0.87
263_P	355_V	0.614	0.87
142_F	149_V	0.613	0.87
207_V	292_I	0.612	0.87
330_E	334_A	0.612	0.87
64_D	183_R	0.610	0.86
292_I	310_V	0.609	0.86
418_N	421_K	0.609	0.86
230_Y	243_L	0.608	0.86
88_L	114_Y	0.607	0.86
96_L	108_D	0.607	0.86
170_L	174_H	0.604	0.86
333_F	337_L	0.604	0.86
124_S	132_S	0.603	0.86
126_E	135_D	0.602	0.86
290_Y	410_I	0.602	0.86
394_I	397_N	0.601	0.86
247_D	357_T	0.601	0.86
225_S	228_E	0.600	0.86
276_N	328_I	0.600	0.86
297_M	332_Y	0.599	0.85
36_D	78_G	0.597	0.85
312_M	373_Y	0.597	0.85
350_Q	355_V	0.597	0.85
197_R	200_N	0.596	0.85
263_P	325_D	0.594	0.85
98_E	133_K	0.593	0.85
300_L	306_M	0.592	0.85
53_N	180_Q	0.588	0.84
139_Y	144_T	0.587	0.84
356_G	369_Q	0.586	0.84
31_P	34_I	0.586	0.84
110_R	114_Y	0.586	0.84
301_N	335_S	0.586	0.84
189_G	193_I	0.585	0.84
186_R	190_I	0.585	0.84
329_G	337_L	0.584	0.84
387_L	390_Y	0.582	0.84
323_I	416_R	0.581	0.84
207_V	382_R	0.581	0.84
6_I	84_I	0.580	0.84
258_R	261_H	0.580	0.84
386_E	406_Y	0.580	0.84
79_L	83_V	0.579	0.84
411_V	416_R	0.579	0.84
362_R	365_D	0.579	0.84
147_N	151_N	0.578	0.83
3_C	125_F	0.578	0.83
5_F	22_A	0.577	0.83
308_N	312_M	0.576	0.83
320_K	362_R	0.574	0.83
402_T	405_S	0.574	0.83
312_M	364_F	0.574	0.83
312_M	351_W	0.573	0.83
379_Y	383_W	0.573	0.83
67_R	71_S	0.572	0.83
290_Y	411_V	0.572	0.83
405_S	408_K	0.572	0.83
159_Q	162_Y	0.570	0.83
251_L	255_Y	0.570	0.83
391_D	398_A	0.570	0.83
97_N	125_F	0.569	0.82
172_D	176_L	0.569	0.82
242_Q	245_W	0.568	0.82
20_I	159_Q	0.566	0.82
320_K	351_W	0.566	0.82
351_W	358_D	0.565	0.82
84_I	115_C	0.564	0.82
245_W	347_G	0.564	0.82
114_Y	118_T	0.564	0.82
192_L	213_T	0.563	0.82
208_A	299_Q	0.563	0.82
29_V	164_N	0.562	0.82
306_M	314_T	0.561	0.82
202_D	206_F	0.561	0.82
170_L	177_P	0.561	0.82
115_C	120_K	0.560	0.81
62_L	73_L	0.560	0.81
26_C	29_V	0.560	0.81
51_A	220_K	0.559	0.81
348_N	359_Y	0.559	0.81
308_N	369_Q	0.558	0.81
154_I	230_Y	0.558	0.81
5_F	19_L	0.557	0.81
7_F	11_L	0.557	0.81
102_P	342_P	0.556	0.81
155_K	158_V	0.556	0.81
131_T	135_D	0.555	0.81
400_K	403_L	0.555	0.81
308_N	364_F	0.552	0.81
364_F	369_Q	0.552	0.81
188_E	196_A	0.552	0.81
278_R	281_Q	0.552	0.81
102_P	260_F	0.551	0.80
341_D	344_V	0.551	0.80
333_F	345_N	0.551	0.80
50_F	304_G	0.549	0.80
188_E	214_F	0.547	0.80
116_E	121_I	0.546	0.80
127_D	227_R	0.545	0.80
126_E	129_L	0.545	0.80
416_R	423_L	0.544	0.80
147_N	150_K	0.544	0.80
57_N	179_R	0.544	0.80
259_V	357_T	0.544	0.80
263_P	266_R	0.544	0.80
131_T	154_I	0.544	0.80
10_D	15_D	0.543	0.79
191_K	196_A	0.543	0.79
39_Q	42_N	0.542	0.79
114_Y	117_D	0.542	0.79
40_V	52_I	0.541	0.79
337_L	349_W	0.540	0.79
250_T	343_S	0.540	0.79
370_Q	398_A	0.537	0.79
47_K	51_A	0.536	0.79
249_Y	252_L	0.536	0.79
308_N	345_N	0.536	0.79
35_L	56_I	0.535	0.78
112_R	116_E	0.535	0.78
38_R	81_E	0.534	0.78
306_M	337_L	0.534	0.78
228_E	231_Y	0.533	0.78
208_A	211_N	0.533	0.78
63_N	66_L	0.533	0.78
345_N	349_W	0.532	0.78
23_L	26_C	0.532	0.78
188_E	191_K	0.532	0.78
356_G	359_Y	0.531	0.78
181_G	188_E	0.531	0.78
129_L	251_L	0.530	0.78
378_K	392_A	0.530	0.78
399_Y	402_T	0.529	0.78
320_K	361_F	0.529	0.78
321_V	419_L	0.528	0.78
188_E	224_L	0.527	0.77
81_E	88_L	0.527	0.77
115_C	122_M	0.526	0.77
219_L	226_I	0.526	0.77
65_E	160_N	0.526	0.77
296_G	314_T	0.525	0.77
140_R	256_N	0.524	0.77
367_W	397_N	0.524	0.77
47_K	52_I	0.523	0.77
416_R	420_A	0.523	0.77
337_L	345_N	0.523	0.77
58_S	218_H	0.523	0.77
299_Q	306_M	0.522	0.77
111_I	114_Y	0.521	0.77
141_N	144_T	0.521	0.77
307_P	351_W	0.521	0.77
170_L	173_E	0.520	0.77
389_S	405_S	0.520	0.77
205_D	211_N	0.518	0.76
50_F	53_N	0.517	0.76
242_Q	308_N	0.517	0.76
139_Y	149_V	0.517	0.76
37_P	40_V	0.517	0.76
242_Q	351_W	0.517	0.76
352_I	361_F	0.516	0.76
229_V	233_L	0.516	0.76
309_R	364_F	0.515	0.76
230_Y	234_L	0.515	0.76
183_R	187_K	0.515	0.76
268_Y	424_Y	0.515	0.76
148_V	152_K	0.513	0.76
362_R	373_Y	0.512	0.75
273_W	319_V	0.511	0.75
283_W	322_L	0.511	0.75
356_G	362_R	0.511	0.75
178_P	338_I	0.511	0.75
230_Y	233_L	0.511	0.75
351_W	359_Y	0.511	0.75
319_V	323_I	0.510	0.75
315_A	349_W	0.510	0.75
207_V	379_Y	0.509	0.75
64_D	156_K	0.509	0.75
197_R	213_T	0.508	0.75
104_S	220_K	0.507	0.75
377_A	395_I	0.506	0.75
76_Y	87_L	0.506	0.75
142_F	248_F	0.506	0.75
401_Y	404_K	0.506	0.75
146_Y	149_V	0.505	0.74
210_D	299_Q	0.504	0.74
308_N	351_W	0.504	0.74
141_N	359_Y	0.503	0.74
265_K	354_S	0.503	0.74
13_L	31_P	0.502	0.74
240_I	244_Y	0.501	0.74
32_A	83_V	0.500	0.74

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4u63A	1	0.9815	100	0.092	Contact Map
1owlA	1	0.9908	100	0.093	Contact Map
3fy4A	1	1	100	0.096	Contact Map
2e0iA	1	0.9746	100	0.096	Contact Map
1dnpA	1	0.9815	100	0.097	Contact Map
1np7A	1	0.9723	100	0.1	Contact Map
1u3dA	1	0.9908	100	0.101	Contact Map
4gu5A	1	0.9954	100	0.104	Contact Map
4k0rA	1	0.9376	100	0.107	Contact Map
4mlpC	1	0.9954	100	0.111	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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