Q97VE6 - SULSO - GREMLIN Contacts

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Q97VE6 - Type II secretion system protein, virB homolog (GspE-2)

UniProt:	Q97VE6	Sequences: MVLIGKKKSHNKFEELSYYLQSLDESGIISLKASLDNRNIVEHYTLNSFDVEIYIAEKDGIGFYLVNEPQLDQRENKILLAILDGLIYSASTAVSNKQIDLEKLQEDVLKISAKLGVIGDVKRNLKKYMYYITREIKYSILQAPMSDPFVEEIELVSPTTPISVVHSRHSEWPRLETNIVLGSELKVRRLVERLASLGGRSVSTATPLQDFMLPEGHRVAVSYGEEISRGTTFNIRKFPEKPLTIIDLIYKYGTLSDLMAVYLWIIAEAKLFTFLVGPTGSGKTTALNALLMLLNPLAKYLTIEDTPELKLPHKYWIQFYTRPSNYEGSKDISYYELVRLSLRYRPDYIIVGEVRGKEIEWLVQAVASGHGGLTTFHGSNHTDLITRISGLLGPELSLQFKQLISVIAIIKRIETEDRKMNRKMISIVENDGNGFREVFRYDYERKNFVPDNLKEITSIQLERSRELLGWSRDKLYREIENRLLLIRGLAEKGVYDYDTLARELVKYYTNGDKSD	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	515 (447)
Sequences:	4129 (2926)
Seq/√Len:	138.4

ECOLI - GSPE HOFB
BACSU - COMGA
HALSA - Q9HR79 Q9HQY3
SULSO - Q97VE6 Q97WB7 Q7LXX6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
467_L	477_R	5.083	1.00
416_E	443_Y	4.734	1.00
262_Y	290_L	4.100	1.00
422_R	444_E	3.987	1.00
191_V	233_F	3.757	1.00
265_I	406_V	3.740	1.00
380_N	383_D	3.545	1.00
421_N	441_Y	3.405	1.00
232_T	299_K	3.378	1.00
422_R	442_D	3.306	1.00
423_K	439_F	3.160	1.00
263_L	293_L	3.156	1.00
298_A	348_Y	3.097	1.00
419_K	448_F	3.028	1.00
44_Y	48_S	2.938	1.00
301_L	341_S	2.768	1.00
416_E	496_D	2.737	1.00
475_L	484_L	2.664	1.00
486_I	500_L	2.634	1.00
415_T	458_S	2.554	1.00
274_F	374_T	2.489	1.00
473_D	477_R	2.475	1.00
408_A	463_R	2.467	1.00
469_G	477_R	2.369	1.00
266_I	290_L	2.355	1.00
303_I	337_L	2.351	1.00
98_Q	102_E	2.349	1.00
217_H	239_P	2.337	1.00
276_V	376_F	2.334	1.00
259_M	263_L	2.329	1.00
354_V	362_L	2.309	1.00
458_S	494_V	2.291	1.00
99_I	103_K	2.288	1.00
162_I	187_V	2.242	1.00
207_P	330_K	2.237	1.00
424_M	440_R	2.210	1.00
264_W	465_R	2.194	1.00
474_K	478_E	2.159	1.00
61_I	87_I	2.113	1.00
221_V	235_I	2.105	1.00
416_E	421_N	2.101	1.00
226_E	317_I	2.071	1.00
424_M	442_D	2.064	1.00
382_T	464_S	2.055	1.00
480_E	488_G	2.052	1.00
174_R	180_V	2.041	1.00
488_G	492_K	2.000	1.00
320_Y	329_S	1.962	1.00
198_G	223_Y	1.941	1.00
485_L	489_L	1.940	1.00
232_T	315_Y	1.936	1.00
294_L	348_Y	1.924	1.00
141_L	190_L	1.909	1.00
149_F	455_E	1.887	1.00
487_R	491_E	1.883	1.00
97_K	101_L	1.881	1.00
171_E	502_R	1.873	1.00
443_Y	496_D	1.871	1.00
473_D	476_Y	1.855	1.00
257_D	480_E	1.838	1.00
385_I	404_I	1.832	1.00
161_P	180_V	1.830	1.00
258_L	461_L	1.819	1.00
57_E	84_D	1.817	1.00
64_Y	78_I	1.815	1.00
96_N	100_D	1.814	1.00
46_L	50_D	1.809	1.00
419_K	455_E	1.785	1.00
333_S	336_E	1.774	1.00
224_G	344_Y	1.741	1.00
200_R	225_E	1.728	1.00
56_A	63_F	1.727	1.00
467_L	473_D	1.724	1.00
92_T	95_S	1.723	1.00
225_E	233_F	1.719	1.00
256_S	260_A	1.714	1.00
63_F	89_S	1.698	1.00
258_L	463_R	1.683	1.00
255_L	258_L	1.677	1.00
303_I	341_S	1.633	1.00
483_L	504_L	1.624	1.00
78_I	86_L	1.618	1.00
65_L	91_S	1.617	1.00
99_I	102_E	1.616	1.00
66_V	88_Y	1.610	1.00
98_Q	103_K	1.583	1.00
99_I	104_L	1.567	1.00
268_E	405_S	1.561	1.00
295_N	300_Y	1.552	1.00
469_G	476_Y	1.551	1.00
416_E	441_Y	1.545	1.00
132_I	135_E	1.543	1.00
389_S	400_F	1.539	1.00
474_K	479_I	1.506	1.00
317_I	341_S	1.497	1.00
442_D	498_D	1.487	1.00
174_R	296_P	1.481	1.00
260_A	264_W	1.477	1.00
96_N	104_L	1.475	1.00
458_S	489_L	1.472	1.00
55_I	65_L	1.469	1.00
228_S	315_Y	1.455	1.00
221_V	237_K	1.440	1.00
238_F	309_L	1.430	1.00
97_K	102_E	1.428	1.00
72_D	76_N	1.426	1.00
489_L	494_V	1.426	1.00
468_L	471_S	1.425	1.00
320_Y	330_K	1.423	1.00
194_L	223_Y	1.418	1.00
337_L	341_S	1.416	1.00
430_N	434_G	1.414	1.00
440_R	490_A	1.410	1.00
464_S	479_I	1.409	1.00
42_E	47_N	1.406	1.00
273_T	406_V	1.385	1.00
426_S	440_R	1.371	1.00
136_I	144_P	1.367	1.00
490_A	500_L	1.365	1.00
258_L	485_L	1.364	1.00
155_L	162_I	1.360	1.00
96_N	101_L	1.360	1.00
150_V	168_R	1.356	1.00
171_E	414_E	1.341	1.00
267_A	293_L	1.340	1.00
416_E	444_E	1.339	1.00
258_L	261_V	1.337	1.00
68_E	71_L	1.336	1.00
163_S	174_R	1.333	1.00
273_T	371_G	1.329	1.00
75_E	88_Y	1.325	1.00
138_Y	144_P	1.316	1.00
257_D	261_V	1.307	1.00
274_F	354_V	1.305	1.00
446_K	449_V	1.303	1.00
207_P	332_I	1.297	1.00
62_G	82_I	1.289	1.00
481_N	484_L	1.289	1.00
417_D	420_M	1.284	1.00
254_T	286_A	1.284	1.00
420_M	446_K	1.275	1.00
431_D	434_G	1.270	1.00
367_A	399_Q	1.268	1.00
279_T	346_P	1.262	1.00
55_I	89_S	1.254	1.00
417_D	449_V	1.254	1.00
469_G	473_D	1.244	1.00
60_G	84_D	1.240	1.00
420_M	449_V	1.239	1.00
363_V	394_P	1.237	1.00
294_L	373_L	1.225	1.00
166_H	175_L	1.224	1.00
417_D	446_K	1.222	1.00
418_R	421_N	1.221	1.00
171_E	297_L	1.215	1.00
261_V	465_R	1.211	1.00
232_T	301_L	1.211	1.00
131_Y	135_E	1.205	1.00
438_V	491_E	1.200	1.00
254_T	262_Y	1.196	1.00
51_V	67_N	1.194	1.00
265_I	463_R	1.190	1.00
138_Y	141_L	1.189	1.00
247_D	251_K	1.188	1.00
97_K	103_K	1.182	1.00
349_I	365_A	1.179	1.00
424_M	427_I	1.177	1.00
423_K	441_Y	1.173	0.99
454_K	496_D	1.170	0.99
197_L	213_L	1.169	0.99
279_T	370_H	1.165	0.99
98_Q	101_L	1.155	0.99
454_K	495_Y	1.155	0.99
496_D	499_T	1.155	0.99
65_L	89_S	1.143	0.99
51_V	93_A	1.137	0.99
219_V	237_K	1.135	0.99
248_L	289_A	1.133	0.99
254_T	461_L	1.132	0.99
423_K	426_S	1.130	0.99
97_K	100_D	1.123	0.99
138_Y	142_Q	1.114	0.99
264_W	268_E	1.099	0.99
168_R	173_P	1.098	0.99
156_V	165_V	1.096	0.99
100_D	104_L	1.094	0.99
360_E	394_P	1.092	0.99
460_Q	486_I	1.092	0.99
354_V	374_T	1.090	0.99
213_L	221_V	1.082	0.99
101_L	104_L	1.080	0.99
136_I	139_S	1.073	0.99
258_L	408_A	1.072	0.99
96_N	99_I	1.071	0.99
249_I	263_L	1.068	0.99
400_F	404_I	1.061	0.99
470_W	473_D	1.055	0.99
276_V	378_G	1.051	0.99
475_L	481_N	1.044	0.99
100_D	103_K	1.026	0.99
407_I	464_S	1.023	0.99
413_I	495_Y	1.022	0.99
343_R	355_R	1.018	0.99
488_G	491_E	1.018	0.99
55_I	63_F	1.011	0.98
96_N	102_E	1.011	0.98
376_F	384_L	1.009	0.98
218_R	240_E	1.009	0.98
248_L	263_L	1.006	0.98
424_M	430_N	1.003	0.98
142_Q	146_S	1.003	0.98
255_L	488_G	1.002	0.98
249_I	259_M	1.002	0.98
184_E	187_V	1.001	0.98
295_N	313_H	0.999	0.98
409_I	482_R	0.998	0.98
50_D	74_R	0.998	0.98
109_L	112_S	0.992	0.98
341_S	349_I	0.989	0.98
475_L	478_E	0.988	0.98
301_L	317_I	0.982	0.98
149_F	168_R	0.981	0.98
140_I	144_P	0.973	0.98
335_Y	358_E	0.968	0.98
100_D	108_V	0.968	0.98
161_P	312_P	0.959	0.98
338_V	361_W	0.958	0.98
426_S	430_N	0.957	0.98
331_D	336_E	0.955	0.98
404_I	407_I	0.953	0.98
52_E	78_I	0.953	0.98
103_K	107_D	0.952	0.98
286_A	408_A	0.949	0.98
437_E	440_R	0.941	0.98
354_V	360_E	0.939	0.98
224_G	340_L	0.939	0.98
50_D	77_K	0.937	0.97
255_L	489_L	0.934	0.97
98_Q	104_L	0.930	0.97
96_N	103_K	0.930	0.97
427_I	430_N	0.929	0.97
414_E	499_T	0.920	0.97
108_V	111_I	0.919	0.97
124_N	127_K	0.919	0.97
104_L	112_S	0.918	0.97
272_F	372_G	0.915	0.97
97_K	111_I	0.915	0.97
107_D	110_K	0.914	0.97
52_E	64_Y	0.912	0.97
485_L	488_G	0.912	0.97
61_I	85_G	0.911	0.97
487_R	490_A	0.910	0.97
364_Q	367_A	0.907	0.97
141_L	194_L	0.907	0.97
491_E	494_V	0.905	0.97
353_E	377_H	0.904	0.97
497_Y	501_A	0.901	0.97
224_G	234_N	0.896	0.97
77_K	80_L	0.895	0.97
252_Y	461_L	0.895	0.97
255_L	485_L	0.895	0.97
303_I	319_F	0.894	0.97
148_P	173_P	0.891	0.97
144_P	164_V	0.890	0.97
41_V	57_E	0.889	0.97
107_D	112_S	0.886	0.96
301_L	315_Y	0.885	0.96
275_L	286_A	0.884	0.96
475_L	479_I	0.882	0.96
158_P	163_S	0.878	0.96
489_L	492_K	0.874	0.96
91_S	95_S	0.871	0.96
52_E	74_R	0.870	0.96
466_E	471_S	0.869	0.96
364_Q	390_G	0.868	0.96
466_E	470_W	0.867	0.96
200_R	224_G	0.866	0.96
266_I	373_L	0.861	0.96
219_V	239_P	0.859	0.96
428_V	432_G	0.858	0.96
193_R	197_L	0.856	0.96
317_I	337_L	0.852	0.96
470_W	474_K	0.852	0.96
79_L	85_G	0.851	0.96
275_L	408_A	0.851	0.96
495_Y	499_T	0.850	0.96
346_P	370_H	0.850	0.96
71_L	74_R	0.850	0.96
52_E	66_V	0.848	0.95
97_K	104_L	0.848	0.95
67_N	70_Q	0.844	0.95
248_L	259_M	0.840	0.95
169_H	414_E	0.838	0.95
102_E	107_D	0.837	0.95
261_V	264_W	0.836	0.95
82_I	85_G	0.835	0.95
198_G	213_L	0.835	0.95
474_K	477_R	0.834	0.95
487_R	497_Y	0.834	0.95
255_L	492_K	0.832	0.95
66_V	71_L	0.831	0.95
342_L	365_A	0.827	0.95
413_I	460_Q	0.826	0.95
308_E	377_H	0.821	0.95
460_Q	503_E	0.820	0.95
109_L	113_A	0.820	0.95
363_V	399_Q	0.819	0.95
426_S	431_D	0.818	0.95
440_R	491_E	0.818	0.95
439_F	442_D	0.816	0.94
272_F	404_I	0.815	0.94
75_E	79_L	0.814	0.94
307_P	318_Q	0.812	0.94
159_T	229_R	0.811	0.94
223_Y	235_I	0.811	0.94
101_L	107_D	0.810	0.94
382_T	479_I	0.807	0.94
84_D	88_Y	0.806	0.94
43_H	46_L	0.806	0.94
98_Q	107_D	0.804	0.94
239_P	243_L	0.804	0.94
480_E	484_L	0.804	0.94
257_D	488_G	0.802	0.94
270_K	380_N	0.800	0.94
130_Y	135_E	0.800	0.94
328_G	333_S	0.795	0.94
486_I	489_L	0.794	0.94
378_G	381_H	0.794	0.94
42_E	78_I	0.791	0.93
430_N	433_N	0.790	0.93
62_G	84_D	0.788	0.93
283_K	353_E	0.787	0.93
97_K	107_D	0.786	0.93
232_T	344_Y	0.785	0.93
130_Y	133_T	0.785	0.93
201_S	329_S	0.784	0.93
46_L	52_E	0.781	0.93
420_M	445_R	0.779	0.93
384_L	407_I	0.776	0.93
207_P	336_E	0.774	0.93
99_I	107_D	0.773	0.93
98_Q	108_V	0.772	0.93
66_V	75_E	0.771	0.93
71_L	75_E	0.771	0.93
102_E	111_I	0.769	0.93
262_Y	463_R	0.769	0.93
401_K	405_S	0.767	0.92
217_H	241_K	0.766	0.92
445_R	449_V	0.765	0.92
254_T	459_I	0.764	0.92
69_P	90_A	0.764	0.92
129_M	133_T	0.763	0.92
286_A	410_I	0.762	0.92
339_R	358_E	0.759	0.92
276_V	384_L	0.758	0.92
501_A	504_L	0.757	0.92
265_I	273_T	0.757	0.92
343_R	377_H	0.755	0.92
112_S	115_L	0.753	0.92
279_T	368_S	0.750	0.92
287_L	350_I	0.749	0.92
283_K	377_H	0.749	0.92
236_R	353_E	0.749	0.92
128_Y	132_I	0.748	0.91
148_P	450_P	0.746	0.91
276_V	409_I	0.746	0.91
333_S	358_E	0.745	0.91
469_G	472_R	0.744	0.91
131_Y	134_R	0.744	0.91
292_M	295_N	0.744	0.91
436_R	439_F	0.741	0.91
145_M	221_V	0.740	0.91
464_S	470_W	0.738	0.91
460_Q	504_L	0.737	0.91
352_G	377_H	0.736	0.91
343_R	353_E	0.734	0.91
126_K	129_M	0.733	0.91
103_K	108_V	0.733	0.91
272_F	363_V	0.732	0.91
247_D	293_L	0.731	0.91
160_T	312_P	0.731	0.91
270_K	405_S	0.730	0.90
105_Q	109_L	0.729	0.90
299_K	315_Y	0.728	0.90
127_K	134_R	0.727	0.90
99_I	108_V	0.725	0.90
464_S	474_K	0.724	0.90
441_Y	444_E	0.724	0.90
236_R	377_H	0.724	0.90
105_Q	113_A	0.724	0.90
265_I	405_S	0.723	0.90
161_P	174_R	0.714	0.89
499_T	502_R	0.714	0.89
104_L	107_D	0.713	0.89
299_K	344_Y	0.713	0.89
266_I	273_T	0.713	0.89
490_A	497_Y	0.710	0.89
112_S	116_G	0.709	0.89
278_P	411_K	0.709	0.89
74_R	78_I	0.708	0.89
256_S	259_M	0.707	0.89
262_Y	273_T	0.705	0.89
115_L	118_I	0.703	0.89
308_E	353_E	0.701	0.89
234_N	344_Y	0.698	0.88
46_L	81_A	0.696	0.88
104_L	111_I	0.696	0.88
243_L	247_D	0.694	0.88
67_N	93_A	0.694	0.88
59_D	84_D	0.689	0.88
162_I	190_L	0.689	0.88
462_E	479_I	0.688	0.88
483_L	487_R	0.686	0.88
200_R	233_F	0.685	0.87
482_R	486_I	0.683	0.87
484_L	487_R	0.681	0.87
195_A	231_T	0.680	0.87
425_I	439_F	0.680	0.87
465_R	479_I	0.680	0.87
66_V	74_R	0.675	0.87
236_R	308_E	0.675	0.87
104_L	114_K	0.674	0.87
42_E	52_E	0.674	0.87
47_N	52_E	0.674	0.87
294_L	298_A	0.674	0.87
330_K	333_S	0.671	0.86
332_I	337_L	0.671	0.86
467_L	474_K	0.669	0.86
187_V	191_V	0.668	0.86
103_K	115_L	0.668	0.86
272_F	364_Q	0.667	0.86
102_E	115_L	0.665	0.86
413_I	458_S	0.665	0.86
464_S	481_N	0.662	0.86
435_F	438_V	0.660	0.85
303_I	317_I	0.659	0.85
156_V	205_A	0.658	0.85
341_S	351_V	0.657	0.85
105_Q	115_L	0.656	0.85
76_N	79_L	0.655	0.85
79_L	83_L	0.654	0.85
108_V	114_K	0.654	0.85
111_I	115_L	0.651	0.85
151_E	234_N	0.650	0.85
415_T	494_V	0.649	0.85
73_Q	77_K	0.648	0.84
212_M	220_A	0.646	0.84
192_E	202_V	0.646	0.84
355_R	377_H	0.645	0.84
417_D	445_R	0.645	0.84
287_L	373_L	0.644	0.84
290_L	303_I	0.642	0.84
279_T	343_R	0.642	0.84
144_P	153_I	0.642	0.84
147_D	215_E	0.639	0.84
303_I	361_W	0.638	0.84
88_Y	92_T	0.638	0.84
99_I	110_K	0.637	0.83
284_T	309_L	0.637	0.83
42_E	54_Y	0.637	0.83
154_E	234_N	0.636	0.83
406_V	463_R	0.636	0.83
168_R	175_L	0.636	0.83
220_A	240_E	0.635	0.83
383_D	386_T	0.635	0.83
494_V	500_L	0.634	0.83
63_F	87_I	0.634	0.83
57_E	60_G	0.631	0.83
114_K	120_D	0.630	0.83
71_L	77_K	0.630	0.83
54_Y	57_E	0.629	0.83
67_N	91_S	0.629	0.83
66_V	72_D	0.628	0.83
163_S	296_P	0.627	0.82
214_P	218_R	0.627	0.82
50_D	71_L	0.626	0.82
123_R	126_K	0.625	0.82
284_T	311_L	0.623	0.82
343_R	352_G	0.622	0.82
104_L	118_I	0.621	0.82
240_E	309_L	0.621	0.82
311_L	314_K	0.621	0.82
98_Q	111_I	0.620	0.82
264_W	267_A	0.619	0.82
140_I	181_L	0.619	0.82
236_R	343_R	0.619	0.82
85_G	88_Y	0.619	0.82
58_K	63_F	0.619	0.82
350_I	374_T	0.618	0.82
78_I	82_I	0.618	0.82
43_H	47_N	0.618	0.82
240_E	243_L	0.617	0.81
416_E	422_R	0.616	0.81
257_D	260_A	0.616	0.81
363_V	367_A	0.616	0.81
336_E	340_L	0.615	0.81
47_N	54_Y	0.612	0.81
279_T	355_R	0.612	0.81
294_L	300_Y	0.612	0.81
108_V	112_S	0.611	0.81
236_R	283_K	0.610	0.81
490_A	495_Y	0.608	0.80
101_L	105_Q	0.608	0.80
330_K	336_E	0.607	0.80
258_L	480_E	0.606	0.80
82_I	86_L	0.606	0.80
270_K	285_T	0.606	0.80
155_L	187_V	0.605	0.80
194_L	233_F	0.605	0.80
428_V	431_D	0.604	0.80
49_F	77_K	0.603	0.80
346_P	387_R	0.603	0.80
156_V	204_T	0.603	0.80
154_E	345_R	0.602	0.80
136_I	142_Q	0.602	0.80
210_D	224_G	0.601	0.80
340_L	344_Y	0.601	0.80
157_S	344_Y	0.600	0.80
265_I	465_R	0.599	0.80
305_D	318_Q	0.598	0.79
273_T	405_S	0.597	0.79
351_V	359_I	0.596	0.79
145_M	153_I	0.596	0.79
140_I	190_L	0.596	0.79
272_F	342_L	0.595	0.79
113_A	117_V	0.595	0.79
44_Y	47_N	0.594	0.79
152_E	343_R	0.594	0.79
440_R	443_Y	0.594	0.79
427_I	431_D	0.593	0.79
426_S	438_V	0.592	0.79
328_G	332_I	0.591	0.79
58_K	61_I	0.589	0.78
454_K	498_D	0.589	0.78
435_F	439_F	0.589	0.78
73_Q	459_I	0.587	0.78
288_N	311_L	0.587	0.78
447_N	451_D	0.585	0.78
272_F	405_S	0.585	0.78
341_S	471_S	0.584	0.78
461_L	465_R	0.582	0.78
268_E	468_L	0.582	0.78
122_K	127_K	0.581	0.77
483_L	500_L	0.581	0.77
269_A	379_S	0.580	0.77
207_P	331_D	0.579	0.77
272_F	366_V	0.578	0.77
405_S	471_S	0.578	0.77
158_P	161_P	0.575	0.77
284_T	288_N	0.574	0.77
138_Y	193_R	0.573	0.76
242_P	247_D	0.571	0.76
125_L	128_Y	0.568	0.76
141_L	144_P	0.568	0.76
60_G	63_F	0.567	0.76
275_L	287_L	0.567	0.76
338_V	342_L	0.567	0.76
210_D	351_V	0.566	0.76
486_I	495_Y	0.565	0.75
127_K	130_Y	0.564	0.75
103_K	112_S	0.564	0.75
45_T	49_F	0.563	0.75
129_M	132_I	0.563	0.75
154_E	306_T	0.562	0.75
58_K	62_G	0.562	0.75
285_T	309_L	0.562	0.75
226_E	344_Y	0.561	0.75
111_I	114_K	0.561	0.75
284_T	289_A	0.561	0.75
291_L	350_I	0.561	0.75
426_S	429_E	0.560	0.75
194_L	235_I	0.558	0.75
42_E	45_T	0.556	0.74
236_R	355_R	0.556	0.74
195_A	209_Q	0.554	0.74
366_V	403_L	0.554	0.74
352_G	355_R	0.553	0.74
339_R	356_G	0.548	0.73
477_R	480_E	0.548	0.73
64_Y	88_Y	0.548	0.73
283_K	343_R	0.548	0.73
343_R	387_R	0.547	0.73
104_L	115_L	0.547	0.73
65_L	69_P	0.546	0.73
239_P	242_P	0.546	0.73
152_E	377_H	0.546	0.73
308_E	355_R	0.545	0.73
68_E	78_I	0.544	0.73
332_I	340_L	0.544	0.73
283_K	308_E	0.543	0.73
308_E	343_R	0.541	0.72
419_K	447_N	0.541	0.72
260_A	429_E	0.541	0.72
79_L	86_L	0.541	0.72
128_Y	135_E	0.541	0.72
57_E	62_G	0.541	0.72
210_D	343_R	0.540	0.72
101_L	117_V	0.539	0.72
145_M	213_L	0.539	0.72
315_Y	344_Y	0.539	0.72
279_T	353_E	0.539	0.72
283_K	352_G	0.538	0.72
460_Q	489_L	0.536	0.72
139_S	329_S	0.535	0.71
106_E	109_L	0.534	0.71
46_L	49_F	0.533	0.71
279_T	377_H	0.532	0.71
364_Q	395_E	0.531	0.71
483_L	486_I	0.531	0.71
196_S	202_V	0.530	0.71
162_I	181_L	0.530	0.71
449_V	457_T	0.529	0.71
243_L	284_T	0.529	0.71
368_S	379_S	0.528	0.70
338_V	341_S	0.528	0.70
76_N	397_S	0.528	0.70
291_L	314_K	0.527	0.70
90_A	95_S	0.527	0.70
68_E	317_I	0.527	0.70
189_R	196_S	0.526	0.70
239_P	309_L	0.526	0.70
226_E	341_S	0.526	0.70
239_P	288_N	0.525	0.70
68_E	76_N	0.525	0.70
270_K	504_L	0.524	0.70
391_L	461_L	0.524	0.70
162_I	191_V	0.523	0.70
213_L	223_Y	0.523	0.70
243_L	289_A	0.522	0.70
431_D	438_V	0.521	0.69
108_V	113_A	0.521	0.69
261_V	463_R	0.521	0.69
127_K	131_Y	0.520	0.69
98_Q	105_Q	0.520	0.69
476_Y	479_I	0.519	0.69
229_R	310_K	0.519	0.69
175_L	180_V	0.519	0.69
156_V	344_Y	0.518	0.69
212_M	364_Q	0.517	0.69
157_S	388_I	0.517	0.69
463_R	466_E	0.517	0.69
103_K	111_I	0.517	0.69
158_P	232_T	0.516	0.69
158_P	181_L	0.515	0.69
367_A	403_L	0.515	0.69
100_D	109_L	0.513	0.68
182_G	225_E	0.512	0.68
334_Y	359_I	0.511	0.68
66_V	69_P	0.510	0.68
129_M	135_E	0.510	0.68
220_A	302_T	0.510	0.68
356_G	359_I	0.509	0.68
355_R	387_R	0.509	0.68
355_R	375_T	0.508	0.68
391_L	395_E	0.508	0.68
81_A	84_D	0.508	0.68
91_S	94_V	0.508	0.68
104_L	109_L	0.506	0.67
102_E	106_E	0.506	0.67
465_R	468_L	0.506	0.67
73_Q	76_N	0.505	0.67
489_L	500_L	0.503	0.67
232_T	317_I	0.503	0.67
288_N	354_V	0.503	0.67
422_R	425_I	0.502	0.67
264_W	448_F	0.502	0.67
114_K	117_V	0.501	0.67
249_I	256_S	0.501	0.67
370_H	387_R	0.500	0.66
167_S	345_R	0.500	0.66

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4phtA	1	0.8058	100	0.391	Contact Map
4ksrA	3	0.6699	100	0.449	Contact Map
2oap1	3	0.9437	100	0.471	Contact Map
1p9rA	1	0.6951	100	0.473	Contact Map
4ihqA	3	0.9476	100	0.497	Contact Map
2ewvA	3	0.6194	100	0.595	Contact Map
3jvvA	3	0.6058	100	0.605	Contact Map
2gzaA	3	0.5825	100	0.687	Contact Map
2eyuA	1	0.4272	100	0.714	Contact Map
4bloA	4	0.4893	100	0.749	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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