Q97VB6 - SULSO - GREMLIN Contacts

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Q97VB6 - N-carbamoyl-L-amino acid amidohydrolase (AmaB)

UniProt:	Q97VB6	Sequences: MNPERFLTTFHSLTNIGWTEDGVLRLALNEYDIKVREELIKILSSIGVHIMVDDAGNIIGELGGKLSDAIAIGSHMDSVPYGGKYDGFYGVMAGLEVLRSIKERGISNHSIKLIDFTNEEGSRFQPSLLGSGLTTGIFDKNYVYSRRDKDNISFEEALRVSGFMGDESNRLMHMKPNYYLELHIEQGPILEEEGYQIGIPLGIAGLSVYEFTFKGQSSQTGPTPMDRRRDALVGASKFVVSVRDHAKKQENLRATVGILNVKPNVYNAIPREVRLTVDVRSIERNRIDHTINEFVNIAKSIADDEKLEVEYRHLWTANPVSFSDEVISVIERACKELSMRYKFMYSWAGHDAQYMTKISKVGMIFIPSHLGISHAKEEYSSDEDMLNGLRVLEKAVELLNS	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	401 (385)
Sequences:	4192 (3087)
Seq/√Len:	157.3

ECOLI - ALLC YGEY DAPE ARGE
BACSU - ALLC PEPVL YQJE YODQ FAPD AMHX YHAA
SULSO - Q97VB6 Q97Y12 Q97V97

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
234_G	307_L	4.400	1.00
331_E	343_F	3.910	1.00
43_L	60_G	3.626	1.00
61_E	112_K	3.600	1.00
243_R	305_E	3.257	1.00
193_E	342_K	3.182	1.00
368_S	380_S	3.179	1.00
38_E	42_I	3.161	1.00
332_R	398_L	3.090	1.00
336_E	394_K	3.081	1.00
72_I	94_G	3.057	1.00
213_F	238_F	2.911	1.00
72_I	396_V	2.905	1.00
152_I	157_A	2.837	1.00
89_Y	385_M	2.800	1.00
337_L	394_K	2.714	1.00
66_L	108_N	2.484	1.00
62_L	102_K	2.453	1.00
336_E	398_L	2.397	1.00
40_I	44_S	2.349	1.00
40_I	58_I	2.228	1.00
237_K	304_D	2.212	1.00
216_Q	229_R	2.208	1.00
330_I	395_A	2.190	1.00
153_S	156_E	2.178	1.00
65_K	108_N	2.174	1.00
46_I	95_L	2.161	1.00
369_H	379_Y	2.140	1.00
201_L	343_F	2.128	1.00
98_L	113_L	2.098	1.00
366_I	380_S	2.042	1.00
252_L	290_T	2.038	1.00
100_S	104_R	2.028	1.00
262_K	272_E	2.027	1.00
380_S	385_M	2.012	1.00
212_T	272_E	2.007	1.00
241_S	297_I	1.986	1.00
38_E	41_K	1.978	1.00
97_V	396_V	1.969	1.00
109_H	177_N	1.955	1.00
372_I	375_A	1.924	1.00
300_S	304_D	1.906	1.00
323_S	360_K	1.894	1.00
237_K	305_E	1.867	1.00
331_E	335_K	1.859	1.00
379_Y	382_D	1.850	1.00
326_V	362_G	1.842	1.00
58_I	115_D	1.835	1.00
22_G	25_R	1.834	1.00
100_S	393_E	1.826	1.00
42_I	45_S	1.813	1.00
210_E	312_R	1.806	1.00
49_H	63_G	1.803	1.00
157_A	160_V	1.761	1.00
85_Y	379_Y	1.755	1.00
30_E	160_V	1.745	1.00
69_A	110_S	1.740	1.00
214_K	272_E	1.720	1.00
260_N	274_R	1.687	1.00
297_I	300_S	1.687	1.00
172_M	175_K	1.677	1.00
39_L	76_M	1.658	1.00
284_R	319_P	1.656	1.00
101_I	106_I	1.650	1.00
37_E	163_F	1.647	1.00
291_I	295_V	1.637	1.00
48_V	62_L	1.626	1.00
71_A	114_I	1.609	1.00
330_I	364_I	1.595	1.00
238_F	298_A	1.588	1.00
41_K	44_S	1.579	1.00
213_F	275_L	1.577	1.00
333_A	391_V	1.559	1.00
41_K	45_S	1.553	1.00
214_K	308_E	1.539	1.00
72_I	97_V	1.536	1.00
180_L	395_A	1.531	1.00
76_M	115_D	1.529	1.00
197_I	391_V	1.524	1.00
329_V	398_L	1.498	1.00
327_I	343_F	1.485	1.00
218_S	223_T	1.485	1.00
100_S	390_R	1.482	1.00
33_I	37_E	1.479	1.00
196_Q	340_R	1.473	1.00
292_N	296_N	1.468	1.00
74_S	91_V	1.465	1.00
93_A	389_L	1.465	1.00
43_L	95_L	1.461	1.00
232_L	259_L	1.452	1.00
71_A	176_P	1.430	1.00
129_L	154_F	1.428	1.00
63_G	110_S	1.414	1.00
295_V	299_K	1.412	1.00
296_N	300_S	1.406	1.00
40_I	50_I	1.398	1.00
72_I	180_L	1.393	1.00
368_S	384_D	1.392	1.00
196_Q	384_D	1.386	1.00
31_Y	34_K	1.385	1.00
248_K	293_E	1.384	1.00
241_S	244_D	1.382	1.00
394_K	398_L	1.363	1.00
137_I	357_K	1.362	1.00
39_L	60_G	1.361	1.00
231_A	273_V	1.357	1.00
78_S	88_F	1.354	1.00
192_E	227_R	1.351	1.00
220_T	255_T	1.351	1.00
64_G	67_S	1.346	1.00
333_A	398_L	1.345	1.00
32_D	36_R	1.343	1.00
232_L	273_V	1.341	1.00
233_V	243_R	1.336	1.00
352_A	361_V	1.334	1.00
48_V	98_L	1.333	1.00
65_K	107_S	1.332	1.00
386_L	390_R	1.323	1.00
246_A	254_A	1.320	1.00
63_G	67_S	1.317	1.00
237_K	244_D	1.307	1.00
212_T	310_E	1.307	1.00
179_Y	352_A	1.298	1.00
39_L	43_L	1.298	1.00
212_T	274_R	1.289	1.00
118_N	121_G	1.288	1.00
235_A	239_V	1.287	1.00
210_E	274_R	1.283	1.00
289_H	293_E	1.281	1.00
98_L	111_I	1.277	1.00
239_V	259_L	1.273	1.00
335_K	341_Y	1.270	1.00
214_K	310_E	1.267	1.00
238_F	275_L	1.263	1.00
68_D	109_H	1.259	1.00
252_L	281_S	1.258	1.00
242_V	254_A	1.257	1.00
40_I	52_V	1.254	1.00
156_E	159_R	1.252	1.00
313_H	316_T	1.244	1.00
123_R	148_D	1.239	1.00
237_K	240_V	1.237	1.00
55_A	133_L	1.234	1.00
233_V	239_V	1.218	1.00
232_L	261_V	1.202	1.00
23_V	81_Y	1.196	1.00
195_Y	342_K	1.181	1.00
330_I	362_G	1.175	1.00
196_Q	387_N	1.171	1.00
180_L	399_L	1.170	1.00
99_R	103_E	1.163	1.00
128_L	132_G	1.157	1.00
235_A	259_L	1.156	1.00
148_D	152_I	1.144	1.00
139_D	142_Y	1.141	1.00
143_V	388_G	1.140	1.00
95_L	113_L	1.136	1.00
213_F	235_A	1.133	1.00
369_H	381_S	1.132	1.00
176_P	180_L	1.131	1.00
70_I	109_H	1.130	1.00
189_I	224_P	1.126	1.00
21_D	25_R	1.123	1.00
224_P	227_R	1.123	1.00
25_R	28_L	1.120	1.00
37_E	40_I	1.120	1.00
59_I	71_A	1.108	1.00
70_I	178_Y	1.105	1.00
284_R	318_N	1.104	1.00
59_I	114_I	1.102	1.00
140_K	144_Y	1.098	0.99
390_R	394_K	1.094	0.99
46_I	99_R	1.087	0.99
177_N	180_L	1.085	0.99
202_G	282_I	1.084	0.99
261_V	273_V	1.083	0.99
98_L	102_K	1.081	0.99
164_M	167_E	1.079	0.99
302_A	309_V	1.078	0.99
174_M	177_N	1.078	0.99
298_A	309_V	1.076	0.99
16_I	38_E	1.054	0.99
239_V	256_V	1.052	0.99
64_G	110_S	1.048	0.99
335_K	340_R	1.043	0.99
34_K	37_E	1.039	0.99
216_Q	372_I	1.036	0.99
22_G	27_A	1.026	0.99
89_Y	182_L	1.026	0.99
155_E	159_R	1.021	0.99
15_N	18_W	1.020	0.99
30_E	34_K	1.019	0.99
60_G	63_G	1.017	0.99
25_R	29_N	1.015	0.99
327_I	362_G	1.009	0.99
128_L	354_Y	1.005	0.99
339_M	387_N	0.999	0.99
213_F	309_V	0.989	0.99
147_R	153_S	0.987	0.99
333_A	394_K	0.987	0.99
223_T	269_I	0.986	0.99
297_I	301_I	0.985	0.99
366_I	388_G	0.983	0.99
368_S	381_S	0.979	0.99
174_M	180_L	0.975	0.99
381_S	384_D	0.973	0.99
332_R	336_E	0.972	0.99
389_L	393_E	0.970	0.99
106_I	397_E	0.966	0.99
334_C	391_V	0.962	0.99
39_L	115_D	0.957	0.99
288_D	316_T	0.955	0.99
17_G	21_D	0.952	0.99
129_L	132_G	0.952	0.99
93_A	182_L	0.948	0.98
235_A	275_L	0.944	0.98
159_R	165_G	0.943	0.98
97_V	393_E	0.938	0.98
229_R	308_E	0.931	0.98
19_T	22_G	0.928	0.98
26_L	29_N	0.927	0.98
62_L	107_S	0.925	0.98
199_I	330_I	0.922	0.98
337_L	390_R	0.917	0.98
80_P	265_V	0.917	0.98
23_V	27_A	0.913	0.98
37_E	41_K	0.913	0.98
324_D	328_S	0.912	0.98
176_P	359_S	0.911	0.98
57_N	130_G	0.910	0.98
172_M	176_P	0.909	0.98
209_Y	291_I	0.902	0.98
363_M	373_S	0.896	0.98
123_R	354_Y	0.887	0.98
142_Y	146_R	0.882	0.98
244_D	248_K	0.881	0.98
30_E	33_I	0.876	0.97
333_A	337_L	0.871	0.97
327_I	331_E	0.871	0.97
93_A	392_L	0.870	0.97
76_M	88_F	0.868	0.97
322_F	361_V	0.868	0.97
387_N	390_R	0.865	0.97
30_E	157_A	0.865	0.97
14_T	18_W	0.858	0.97
62_L	98_L	0.857	0.97
42_I	46_I	0.857	0.97
39_L	113_L	0.857	0.97
62_L	101_I	0.856	0.97
281_S	286_R	0.855	0.97
189_I	193_E	0.854	0.97
148_D	345_Y	0.853	0.97
132_G	138_F	0.853	0.97
218_S	269_I	0.848	0.97
383_E	387_N	0.843	0.97
284_R	288_D	0.841	0.97
23_V	84_K	0.833	0.97
245_H	293_E	0.832	0.97
156_E	160_V	0.826	0.96
277_V	294_F	0.825	0.96
57_N	60_G	0.824	0.96
372_I	377_E	0.823	0.96
355_M	359_S	0.823	0.96
245_H	248_K	0.822	0.96
235_A	256_V	0.822	0.96
171_L	176_P	0.820	0.96
93_A	388_G	0.819	0.96
128_L	131_S	0.817	0.96
245_H	297_I	0.815	0.96
173_H	176_P	0.815	0.96
171_L	175_K	0.813	0.96
170_R	174_M	0.813	0.96
180_L	392_L	0.812	0.96
68_D	177_N	0.812	0.96
36_R	58_I	0.809	0.96
182_L	388_G	0.807	0.96
367_P	371_G	0.805	0.96
19_T	23_V	0.803	0.96
141_N	144_Y	0.803	0.96
242_V	275_L	0.798	0.96
158_L	162_G	0.796	0.96
195_Y	340_R	0.795	0.96
61_E	69_A	0.795	0.96
154_F	157_A	0.793	0.95
129_L	143_V	0.792	0.95
329_V	333_A	0.791	0.95
262_K	274_R	0.789	0.95
79_V	116_F	0.786	0.95
261_V	264_N	0.785	0.95
145_S	153_S	0.785	0.95
33_I	161_S	0.785	0.95
212_T	312_R	0.783	0.95
27_A	32_D	0.782	0.95
61_E	110_S	0.782	0.95
286_R	289_H	0.781	0.95
211_F	311_Y	0.777	0.95
48_V	95_L	0.775	0.95
211_F	277_V	0.775	0.95
14_T	23_V	0.773	0.95
96_E	100_S	0.773	0.95
199_I	327_I	0.773	0.95
18_W	96_E	0.772	0.95
334_C	341_Y	0.771	0.95
245_H	290_T	0.770	0.95
104_R	393_E	0.769	0.95
112_K	171_L	0.767	0.95
16_I	19_T	0.767	0.95
211_F	298_A	0.766	0.95
67_S	110_S	0.764	0.94
328_S	332_R	0.763	0.94
58_I	61_E	0.761	0.94
135_T	358_I	0.760	0.94
133_L	143_V	0.757	0.94
51_M	112_K	0.754	0.94
53_D	56_G	0.749	0.94
367_P	384_D	0.749	0.94
50_I	58_I	0.748	0.94
22_G	28_L	0.748	0.94
244_D	297_I	0.747	0.94
101_I	107_S	0.747	0.94
192_E	226_D	0.746	0.94
104_R	397_E	0.744	0.94
213_F	307_L	0.744	0.94
327_I	330_I	0.743	0.94
48_V	102_K	0.741	0.94
39_L	91_V	0.739	0.93
238_F	302_A	0.737	0.93
292_N	295_V	0.736	0.93
171_L	178_Y	0.735	0.93
116_F	179_Y	0.734	0.93
279_V	290_T	0.734	0.93
36_R	117_T	0.733	0.93
183_H	186_Q	0.732	0.93
288_D	292_N	0.728	0.93
29_N	124_F	0.727	0.93
213_F	234_G	0.726	0.93
302_A	307_L	0.725	0.93
209_Y	311_Y	0.725	0.93
211_F	275_L	0.724	0.93
252_L	286_R	0.724	0.93
43_L	98_L	0.721	0.93
217_S	231_A	0.720	0.93
76_M	91_V	0.719	0.92
299_K	302_A	0.718	0.92
19_T	24_L	0.715	0.92
355_M	358_I	0.711	0.92
17_G	20_E	0.708	0.92
258_I	276_T	0.707	0.92
200_P	205_G	0.707	0.92
197_I	367_P	0.704	0.92
46_I	102_K	0.704	0.92
135_T	355_M	0.704	0.92
54_D	140_K	0.703	0.92
285_N	288_D	0.702	0.92
116_F	355_M	0.701	0.92
329_V	399_L	0.701	0.92
73_G	351_D	0.700	0.91
393_E	397_E	0.700	0.91
177_N	182_L	0.698	0.91
222_P	253_R	0.697	0.91
152_I	160_V	0.697	0.91
170_R	180_L	0.696	0.91
140_K	143_V	0.696	0.91
380_S	384_D	0.694	0.91
17_G	22_G	0.693	0.91
231_A	271_R	0.691	0.91
72_I	111_I	0.691	0.91
216_Q	269_I	0.690	0.91
328_S	331_E	0.688	0.91
232_L	236_S	0.688	0.91
222_P	348_A	0.687	0.91
118_N	126_P	0.687	0.91
14_T	17_G	0.685	0.91
51_M	133_L	0.684	0.91
210_E	314_L	0.681	0.90
216_Q	370_L	0.680	0.90
381_S	385_M	0.678	0.90
37_E	52_V	0.678	0.90
141_N	145_S	0.677	0.90
335_K	338_S	0.675	0.90
42_I	95_L	0.675	0.90
390_R	393_E	0.675	0.90
332_R	335_K	0.674	0.90
51_M	61_E	0.672	0.90
328_S	343_F	0.672	0.90
51_M	59_I	0.669	0.90
258_I	264_N	0.669	0.90
44_S	49_H	0.668	0.89
296_N	299_K	0.665	0.89
89_Y	366_I	0.664	0.89
36_R	39_L	0.663	0.89
193_E	196_Q	0.662	0.89
128_L	206_L	0.659	0.89
122_S	268_A	0.658	0.89
170_R	176_P	0.657	0.89
329_V	332_R	0.657	0.89
159_R	164_M	0.656	0.89
368_S	371_G	0.655	0.89
96_E	99_R	0.655	0.89
64_G	98_L	0.654	0.88
155_E	158_L	0.654	0.88
14_T	84_K	0.653	0.88
366_I	385_M	0.652	0.88
62_L	106_I	0.652	0.88
158_L	163_F	0.652	0.88
139_D	143_V	0.652	0.88
185_E	198_G	0.651	0.88
224_P	347_W	0.649	0.88
29_N	32_D	0.649	0.88
240_V	243_R	0.648	0.88
236_S	240_V	0.648	0.88
43_L	50_I	0.646	0.88
176_P	182_L	0.645	0.88
145_S	343_F	0.645	0.88
233_V	305_E	0.645	0.88
16_I	35_V	0.643	0.88
191_E	195_Y	0.640	0.87
172_M	180_L	0.638	0.87
349_G	353_Q	0.638	0.87
172_M	178_Y	0.637	0.87
118_N	220_T	0.637	0.87
144_Y	155_E	0.636	0.87
44_S	50_I	0.634	0.87
191_E	370_L	0.631	0.87
134_T	355_M	0.631	0.87
172_M	177_N	0.631	0.87
19_T	31_Y	0.630	0.87
232_L	235_A	0.630	0.87
388_G	392_L	0.629	0.86
205_G	208_V	0.628	0.86
242_V	256_V	0.627	0.86
237_K	241_S	0.627	0.86
213_F	298_A	0.623	0.86
15_N	19_T	0.623	0.86
141_N	146_R	0.622	0.86
75_H	86_D	0.622	0.86
234_G	301_I	0.620	0.86
190_L	198_G	0.617	0.85
382_D	386_L	0.616	0.85
207_S	287_I	0.615	0.85
379_Y	385_M	0.614	0.85
203_I	206_L	0.612	0.85
19_T	27_A	0.612	0.85
229_R	306_K	0.612	0.85
55_A	140_K	0.612	0.85
196_Q	367_P	0.611	0.85
173_H	178_Y	0.610	0.85
188_P	192_E	0.610	0.85
14_T	25_R	0.609	0.85
254_A	279_V	0.608	0.85
333_A	395_A	0.608	0.85
25_R	30_E	0.608	0.85
59_I	134_T	0.608	0.85
53_D	57_N	0.607	0.84
28_L	117_T	0.606	0.84
364_I	388_G	0.606	0.84
204_A	282_I	0.604	0.84
101_I	397_E	0.602	0.84
186_Q	200_P	0.602	0.84
39_L	95_L	0.601	0.84
153_S	157_A	0.601	0.84
100_S	103_E	0.600	0.84
20_E	24_L	0.598	0.84
221_G	257_G	0.598	0.84
213_F	302_A	0.596	0.83
15_N	27_A	0.595	0.83
58_I	63_G	0.595	0.83
236_S	239_V	0.595	0.83
166_D	170_R	0.595	0.83
118_N	129_L	0.594	0.83
289_H	292_N	0.593	0.83
325_E	329_V	0.592	0.83
154_F	158_L	0.590	0.83
62_L	65_K	0.590	0.83
22_G	26_L	0.588	0.83
181_E	198_G	0.587	0.82
23_V	88_F	0.585	0.82
194_G	197_I	0.585	0.82
49_H	61_E	0.585	0.82
189_I	197_I	0.584	0.82
147_R	156_E	0.583	0.82
18_W	25_R	0.583	0.82
232_L	270_P	0.582	0.82
338_S	341_Y	0.581	0.82
171_L	174_M	0.581	0.82
242_V	277_V	0.581	0.82
384_D	387_N	0.580	0.82
78_S	84_K	0.578	0.82
238_F	309_V	0.578	0.82
229_R	234_G	0.578	0.82
89_Y	93_A	0.576	0.81
144_Y	164_M	0.575	0.81
22_G	82_G	0.573	0.81
52_V	58_I	0.573	0.81
95_L	98_L	0.572	0.81
26_L	122_S	0.568	0.80
124_F	148_D	0.567	0.80
324_D	357_K	0.566	0.80
282_I	345_Y	0.565	0.80
63_G	66_L	0.565	0.80
102_K	105_G	0.565	0.80
121_G	128_L	0.563	0.80
170_R	177_N	0.563	0.80
175_K	178_Y	0.562	0.80
207_S	291_I	0.561	0.80
337_L	387_N	0.560	0.79
60_G	65_K	0.560	0.79
328_S	335_K	0.559	0.79
48_V	60_G	0.559	0.79
218_S	228_R	0.558	0.79
243_R	247_K	0.558	0.79
180_L	183_H	0.556	0.79
132_G	354_Y	0.556	0.79
79_V	265_V	0.555	0.79
85_Y	385_M	0.555	0.79
209_Y	313_H	0.553	0.79
326_V	333_A	0.553	0.79
84_K	88_F	0.552	0.78
24_L	81_Y	0.552	0.78
17_G	23_V	0.551	0.78
295_V	311_Y	0.551	0.78
232_L	239_V	0.549	0.78
15_N	25_R	0.546	0.78
27_A	31_Y	0.545	0.78
233_V	240_V	0.544	0.77
94_G	113_L	0.544	0.77
149_K	260_N	0.543	0.77
341_Y	367_P	0.542	0.77
23_V	78_S	0.542	0.77
21_D	38_E	0.542	0.77
180_L	326_V	0.541	0.77
368_S	379_Y	0.540	0.77
121_G	220_T	0.539	0.77
45_S	99_R	0.538	0.77
69_A	109_H	0.537	0.77
197_I	387_N	0.537	0.77
118_N	125_Q	0.536	0.76
129_L	146_R	0.536	0.76
185_E	190_L	0.536	0.76
353_Q	356_T	0.535	0.76
331_E	341_Y	0.533	0.76
145_S	155_E	0.531	0.76
71_A	179_Y	0.530	0.76
58_I	65_K	0.528	0.75
104_R	107_S	0.528	0.75
127_S	132_G	0.527	0.75
176_P	179_Y	0.524	0.75
364_I	392_L	0.521	0.74
301_I	305_E	0.521	0.74
293_E	296_N	0.520	0.74
88_F	115_D	0.520	0.74
60_G	113_L	0.520	0.74
283_E	286_R	0.519	0.74
339_M	391_V	0.519	0.74
35_V	76_M	0.518	0.74
72_I	179_Y	0.518	0.74
180_L	396_V	0.517	0.74
41_K	260_N	0.516	0.74
317_A	353_Q	0.516	0.74
218_S	372_I	0.516	0.74
64_G	69_A	0.516	0.74
38_E	45_S	0.515	0.74
26_L	31_Y	0.515	0.74
181_E	190_L	0.515	0.74
97_V	101_I	0.515	0.74
204_A	208_V	0.514	0.73
101_I	104_R	0.513	0.73
329_V	395_A	0.511	0.73
199_I	341_Y	0.510	0.73
181_E	186_Q	0.508	0.73
94_G	97_V	0.508	0.73
323_S	328_S	0.506	0.72
69_A	112_K	0.506	0.72
225_M	253_R	0.505	0.72
78_S	385_M	0.504	0.72
36_R	76_M	0.502	0.72
158_L	161_S	0.500	0.71
217_S	268_A	0.500	0.71

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3n5fA	2	0.9925	100	0.392	Contact Map
2v8hA	2	0.995	100	0.396	Contact Map
4wjbA	2	0.9925	100	0.404	Contact Map
4pxdA	2	0.9975	100	0.408	Contact Map
4pxeA	2	0.9975	100	0.415	Contact Map
3gb0A	2	0.8504	100	0.47	Contact Map
3khxA	1	0.8653	100	0.474	Contact Map
1lfwA	1	0.9551	100	0.474	Contact Map
3rzaA	2	0.8454	100	0.48	Contact Map
1cg2A	4	0.8778	100	0.488	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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