Q97VA8 - SULSO - GREMLIN Contacts

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Q97VA8 - Amino acid transporter, putative

UniProt:	Q97VA8	Sequences: MPDKSQSVFIRQSSGLVREVSPWASFFATFGLVTGGIPILIVSWLYLAPGANWTLSYLISLLPTLGMAFLFYLASVSTPRSGGDYVFQARSSHPLVAFVNYWALWVAFALSLGLYSYLGAQWFAYLFSGLGVFYNNQTLINLGSFFTTTLGSVIIGIIILIIGAIIASIGKYGWSFVFITGIVSILSTIVTFVALALITPSQFSDALSSFTGVSNAYNEVISTATSNGLNFVSPFYGALLAIPVVWYYYVWYNLPASWSGEMKKVKYNSLLGIIIAVLFIGVYYILFTSLNLHAFGERFLTSWSYISTNSLNSTVYNDLSSMGTFTPFFALLVNHSILLYIVMWIAFWLPNFYSNPPLVISLTRYLFAWAFDRIMPERLADVNEKFHIPLISTIITVIVGLIGVLLYAYVTVISIVDVTVIFEISYGIFALTTALSPFVKKNFFNKVVHIKNISGIPLVSLIGFPEFGFLLFALYQTWGNPVLLPINFPTILSLVIIYTSGIMIYAISYIINKKRGIHMNLIFEEIPPE	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	529 (426)
Sequences:	24308 (16147)
Seq/√Len:	782.3

ECOLI - PUUP PLAP ANSP AROP LYSP MMUP PROY GADC PHEP ADIC GABP YIFK CYCA FRLA POTE YJEM YCAM YGJI CADB YBAT ARCD YJEH
BACSU - YHDG ASPP YBXG YFNA AAPA YBEC YTNA HUTM YDGF ROCC GABP YBGF ROCE YVBW STET ARCD YCGH YECA YDAO GERBB GERAB
HALSA - Q9HHU7 Q9HQB3 Q9HSL5
SULSO - Q97VA8 Q97VA6 Q97U33 Q97VR4 Q97WD4 Q97XM0 Q97Z63 Q97X49 Q97WS3 Q97U05 Q97ZB5 Q7LXI7 Q97YN3 Q97YX9 Q97Y76 Q97U39

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
378_R	391_I	4.180	1.00
164_A	397_V	4.070	1.00
61_L	281_G	3.092	1.00
435_L	439_V	3.030	1.00
381_D	391_I	2.991	1.00
267_Y	271_L	2.818	1.00
21_S	263_K	2.809	1.00
311_L	315_V	2.763	1.00
264_K	267_Y	2.587	1.00
383_N	390_L	2.563	1.00
370_A	380_A	2.490	1.00
262_M	268_N	2.479	1.00
85_Y	372_D	2.442	1.00
101_Y	369_W	2.412	1.00
378_R	381_D	2.389	1.00
195_L	290_L	2.362	1.00
327_P	331_L	2.321	1.00
26_F	275_I	2.293	1.00
326_T	330_A	2.283	1.00
157_I	401_L	2.271	1.00
22_P	275_I	2.208	1.00
459_V	463_G	2.117	1.00
470_L	473_A	2.100	1.00
89_A	97_A	2.095	1.00
367_F	371_F	2.085	1.00
260_G	371_F	2.070	1.00
165_I	169_I	2.064	1.00
193_V	197_L	2.050	1.00
157_I	404_V	2.040	1.00
73_L	437_P	2.026	1.00
25_S	262_M	2.015	1.00
22_P	268_N	2.008	1.00
171_K	175_S	1.994	1.00
261_E	364_R	1.991	1.00
327_P	330_A	1.971	1.00
394_I	398_I	1.923	1.00
168_S	390_L	1.922	1.00
164_A	393_T	1.916	1.00
22_P	26_F	1.915	1.00
467_F	470_L	1.893	1.00
271_L	275_I	1.892	1.00
92_S	435_L	1.891	1.00
182_I	186_L	1.883	1.00
460_S	464_F	1.869	1.00
463_G	467_F	1.868	1.00
161_I	401_L	1.864	1.00
503_M	507_I	1.845	1.00
326_T	329_F	1.845	1.00
89_A	94_P	1.830	1.00
105_W	396_T	1.825	1.00
62_L	66_G	1.818	1.00
16_L	382_V	1.810	1.00
44_W	53_W	1.806	1.00
156_G	404_V	1.806	1.00
497_I	501_G	1.805	1.00
373_R	377_E	1.794	1.00
21_S	24_A	1.788	1.00
379_L	395_I	1.779	1.00
326_T	332_L	1.769	1.00
92_S	431_L	1.734	1.00
461_L	465_P	1.717	1.00
88_Q	100_N	1.712	1.00
463_G	470_L	1.679	1.00
296_G	299_F	1.678	1.00
470_L	474_L	1.657	1.00
456_I	459_V	1.656	1.00
231_F	234_P	1.641	1.00
264_K	268_N	1.636	1.00
70_L	430_A	1.624	1.00
161_I	397_V	1.620	1.00
338_L	342_V	1.610	1.00
460_S	463_G	1.609	1.00
329_F	332_L	1.608	1.00
24_A	178_F	1.597	1.00
274_I	278_L	1.594	1.00
186_L	190_V	1.579	1.00
472_F	476_Q	1.578	1.00
495_V	499_T	1.573	1.00
100_N	428_I	1.565	1.00
455_G	459_V	1.564	1.00
487_N	490_T	1.553	1.00
26_F	279_F	1.542	1.00
435_L	438_F	1.536	1.00
210_F	213_V	1.524	1.00
116_S	355_N	1.520	1.00
168_S	394_I	1.520	1.00
167_A	356_P	1.516	1.00
29_T	276_A	1.504	1.00
112_L	400_G	1.496	1.00
102_W	501_G	1.496	1.00
278_L	282_V	1.495	1.00
160_L	400_G	1.495	1.00
199_T	202_Q	1.491	1.00
123_F	155_I	1.481	1.00
463_G	466_E	1.475	1.00
383_N	388_I	1.465	1.00
453_I	456_I	1.464	1.00
151_G	154_I	1.448	1.00
56_S	241_A	1.442	1.00
199_T	203_F	1.442	1.00
440_K	443_F	1.419	1.00
52_N	231_F	1.413	1.00
474_L	477_T	1.412	1.00
20_V	24_A	1.411	1.00
377_E	380_A	1.411	1.00
310_S	314_T	1.404	1.00
366_L	392_S	1.403	1.00
391_I	395_I	1.401	1.00
458_L	462_I	1.397	1.00
466_E	470_L	1.391	1.00
506_A	510_I	1.387	1.00
460_S	474_L	1.376	1.00
362_L	396_T	1.370	1.00
17_V	387_H	1.365	1.00
258_W	360_I	1.360	1.00
471_L	474_L	1.358	1.00
119_G	159_I	1.358	1.00
93_H	96_V	1.356	1.00
460_S	477_T	1.343	1.00
427_G	464_F	1.339	1.00
95_L	508_S	1.338	1.00
203_F	206_A	1.332	1.00
465_P	469_F	1.325	1.00
92_S	96_V	1.316	1.00
377_E	381_D	1.314	1.00
328_F	331_L	1.313	1.00
455_G	460_S	1.308	1.00
78_T	90_R	1.306	1.00
202_Q	205_D	1.306	1.00
502_I	506_A	1.306	1.00
191_T	195_L	1.302	1.00
381_D	390_L	1.294	1.00
68_A	277_V	1.293	1.00
363_T	393_T	1.289	1.00
441_K	445_N	1.285	1.00
469_F	473_A	1.281	1.00
431_L	435_L	1.279	1.00
326_T	331_L	1.278	1.00
200_P	203_F	1.277	1.00
60_S	245_V	1.277	1.00
39_I	118_L	1.275	1.00
187_S	346_A	1.274	1.00
164_A	394_I	1.274	1.00
160_L	397_V	1.274	1.00
116_S	160_L	1.271	1.00
192_F	286_L	1.271	1.00
264_K	271_L	1.269	1.00
24_A	174_W	1.258	1.00
150_L	154_I	1.257	1.00
157_I	161_I	1.247	1.00
312_N	316_Y	1.246	1.00
367_F	382_V	1.245	1.00
460_S	466_E	1.244	1.00
464_F	468_G	1.242	1.00
441_K	444_F	1.239	1.00
22_P	271_L	1.231	1.00
185_I	189_I	1.230	1.00
456_I	463_G	1.230	1.00
463_G	476_Q	1.225	1.00
54_T	289_S	1.223	1.00
119_G	348_W	1.221	1.00
434_A	438_F	1.207	1.00
454_S	459_V	1.206	1.00
91_S	432_T	1.203	1.00
297_E	300_L	1.200	1.00
196_A	290_L	1.200	1.00
312_N	315_V	1.194	1.00
20_V	174_W	1.189	1.00
507_I	510_I	1.185	1.00
163_G	355_N	1.183	1.00
454_S	457_P	1.182	1.00
202_Q	206_A	1.180	1.00
52_N	238_A	1.179	1.00
268_N	271_L	1.175	1.00
69_F	274_I	1.175	1.00
81_S	260_G	1.175	1.00
496_I	500_S	1.170	1.00
341_I	345_I	1.168	1.00
68_A	273_I	1.166	1.00
488_F	492_L	1.164	1.00
16_L	367_F	1.162	1.00
115_Y	354_S	1.159	1.00
466_E	469_F	1.157	1.00
488_F	491_I	1.156	1.00
468_G	472_F	1.156	1.00
462_I	465_P	1.154	1.00
366_L	375_M	1.150	1.00
195_L	294_A	1.150	1.00
499_T	503_M	1.141	1.00
30_F	279_F	1.136	1.00
457_P	460_S	1.135	1.00
20_V	25_S	1.134	1.00
32_L	280_I	1.128	1.00
198_I	201_S	1.128	1.00
265_V	270_L	1.126	1.00
45_L	53_W	1.123	1.00
148_T	151_G	1.116	1.00
153_V	157_I	1.115	1.00
371_F	380_A	1.113	1.00
463_G	477_T	1.113	1.00
311_L	314_T	1.111	1.00
504_I	507_I	1.110	1.00
466_E	475_Y	1.110	1.00
29_T	255_P	1.106	1.00
462_I	476_Q	1.102	1.00
391_I	394_I	1.100	1.00
442_N	446_K	1.097	1.00
86_V	90_R	1.097	1.00
23_W	27_F	1.096	1.00
67_M	430_A	1.096	1.00
263_K	268_N	1.086	1.00
507_I	511_I	1.083	1.00
460_S	476_Q	1.083	1.00
442_N	445_N	1.082	1.00
461_L	464_F	1.079	1.00
501_G	504_I	1.071	1.00
282_V	286_L	1.070	1.00
473_A	476_Q	1.067	1.00
71_F	84_D	1.064	1.00
75_S	87_F	1.063	1.00
25_S	272_G	1.054	1.00
463_G	469_F	1.051	1.00
198_I	203_F	1.049	1.00
504_I	508_S	1.045	1.00
88_Q	428_I	1.043	1.00
166_I	176_F	1.039	1.00
88_Q	96_V	1.038	1.00
154_I	158_I	1.030	1.00
491_I	494_L	1.030	1.00
28_A	258_W	1.027	1.00
492_L	496_I	1.021	1.00
459_V	466_E	1.021	1.00
190_V	194_A	1.020	1.00
466_E	477_T	1.020	1.00
201_S	204_S	1.019	1.00
177_V	356_P	1.017	1.00
80_R	86_V	1.017	1.00
176_F	180_T	1.015	1.00
201_S	205_D	1.008	1.00
123_F	127_F	1.006	1.00
98_F	102_W	1.006	1.00
19_E	263_K	1.005	1.00
58_L	285_I	1.004	1.00
467_F	471_L	1.002	1.00
189_I	193_V	1.001	1.00
200_P	204_S	0.995	1.00
459_V	462_I	0.984	1.00
465_P	476_Q	0.984	1.00
175_S	179_I	0.980	1.00
444_F	447_V	0.979	1.00
164_A	168_S	0.978	1.00
382_V	387_H	0.975	1.00
464_F	474_L	0.973	1.00
73_L	76_V	0.971	1.00
494_L	498_Y	0.968	1.00
466_E	474_L	0.965	1.00
508_S	511_I	0.962	1.00
487_N	491_I	0.962	1.00
85_Y	368_A	0.960	1.00
492_L	495_V	0.960	1.00
77_S	443_F	0.957	1.00
462_I	466_E	0.951	1.00
489_P	493_S	0.948	1.00
433_T	436_S	0.948	1.00
234_P	237_G	0.945	1.00
464_F	467_F	0.944	1.00
460_S	467_F	0.940	1.00
472_F	475_Y	0.935	1.00
27_F	178_F	0.935	1.00
427_G	431_L	0.933	1.00
314_T	327_P	0.930	1.00
463_G	473_A	0.929	1.00
491_I	495_V	0.928	1.00
161_I	165_I	0.928	1.00
460_S	475_Y	0.926	1.00
458_L	463_G	0.924	1.00
454_S	460_S	0.922	1.00
466_E	473_A	0.913	1.00
341_I	344_W	0.913	1.00
168_S	383_N	0.908	1.00
180_T	353_Y	0.903	1.00
473_A	477_T	0.902	1.00
456_I	460_S	0.902	1.00
49_P	52_N	0.900	1.00
158_I	162_I	0.900	1.00
123_F	348_W	0.898	1.00
95_L	99_V	0.897	1.00
33_V	184_S	0.895	1.00
466_E	476_Q	0.894	1.00
168_S	388_I	0.893	1.00
425_S	428_I	0.892	1.00
432_T	436_S	0.891	1.00
454_S	458_L	0.889	1.00
259_S	269_S	0.889	1.00
105_W	366_L	0.886	1.00
89_A	372_D	0.885	1.00
398_I	402_I	0.885	1.00
192_F	196_A	0.882	1.00
381_D	384_E	0.882	1.00
231_F	238_A	0.882	1.00
66_G	462_I	0.879	1.00
359_V	397_V	0.879	1.00
453_I	457_P	0.877	1.00
281_G	285_I	0.875	1.00
160_L	404_V	0.874	1.00
433_T	437_P	0.874	1.00
454_S	463_G	0.872	1.00
120_A	155_I	0.871	1.00
61_L	249_Y	0.870	1.00
490_T	494_L	0.867	1.00
424_I	428_I	0.863	1.00
253_N	257_S	0.863	1.00
90_R	440_K	0.862	1.00
501_G	505_Y	0.861	1.00
19_E	171_K	0.860	1.00
456_I	462_I	0.859	1.00
460_S	465_P	0.858	1.00
114_L	247_Y	0.857	1.00
458_L	461_L	0.850	1.00
338_L	341_I	0.850	1.00
120_A	156_G	0.848	1.00
162_I	352_F	0.846	1.00
463_G	474_L	0.846	1.00
442_N	447_V	0.845	1.00
197_L	202_Q	0.842	1.00
198_I	202_Q	0.841	1.00
489_P	492_L	0.840	1.00
95_L	502_I	0.840	1.00
24_A	175_S	0.835	1.00
80_R	90_R	0.833	1.00
192_F	290_L	0.832	1.00
397_V	401_L	0.831	1.00
339_L	343_M	0.831	1.00
390_L	394_I	0.829	1.00
93_H	509_Y	0.824	1.00
310_S	313_S	0.821	1.00
184_S	350_P	0.820	1.00
447_V	454_S	0.816	1.00
165_I	168_S	0.814	1.00
463_G	472_F	0.813	1.00
30_F	280_I	0.810	1.00
119_G	351_N	0.809	1.00
470_L	475_Y	0.809	1.00
66_G	70_L	0.808	1.00
453_I	458_L	0.807	1.00
460_S	470_L	0.799	1.00
201_S	206_A	0.793	1.00
240_L	244_V	0.793	1.00
16_L	364_R	0.791	1.00
37_I	287_F	0.790	1.00
467_F	474_L	0.789	1.00
185_I	283_Y	0.788	1.00
289_S	293_H	0.786	1.00
54_T	292_L	0.784	1.00
379_L	391_I	0.784	1.00
490_T	493_S	0.781	1.00
254_L	361_S	0.777	1.00
163_G	356_P	0.775	1.00
155_I	158_I	0.775	1.00
77_S	445_N	0.772	1.00
53_W	288_T	0.771	1.00
470_L	477_T	0.771	1.00
22_P	272_G	0.769	1.00
465_P	468_G	0.769	1.00
235_F	238_A	0.767	1.00
328_F	332_L	0.765	1.00
82_G	86_V	0.763	1.00
455_G	458_L	0.760	1.00
102_W	375_M	0.760	1.00
124_A	152_S	0.760	1.00
200_P	210_F	0.759	1.00
487_N	494_L	0.759	1.00
469_F	476_Q	0.758	1.00
443_F	446_K	0.758	1.00
51_A	292_L	0.757	1.00
163_G	359_V	0.756	1.00
16_L	261_E	0.756	1.00
459_V	477_T	0.756	1.00
23_W	178_F	0.755	1.00
467_F	473_A	0.752	1.00
440_K	445_N	0.751	1.00
459_V	476_Q	0.743	1.00
175_S	178_F	0.743	1.00
426_Y	433_T	0.742	1.00
500_S	504_I	0.741	1.00
459_V	465_P	0.740	1.00
117_Y	412_V	0.738	1.00
488_F	501_G	0.738	1.00
197_L	200_P	0.737	1.00
496_I	499_T	0.737	1.00
65_L	274_I	0.735	1.00
58_L	62_L	0.734	1.00
270_L	273_I	0.734	1.00
457_P	477_T	0.733	1.00
456_I	466_E	0.732	1.00
462_I	477_T	0.731	1.00
427_G	467_F	0.729	1.00
41_I	288_T	0.727	1.00
469_F	472_F	0.724	1.00
264_K	270_L	0.723	1.00
31_G	181_G	0.723	1.00
199_T	204_S	0.721	1.00
65_L	69_F	0.721	1.00
428_I	431_L	0.721	1.00
275_I	279_F	0.720	1.00
74_A	433_T	0.719	1.00
198_I	205_D	0.718	1.00
82_G	85_Y	0.711	1.00
198_I	206_A	0.710	1.00
96_V	428_I	0.707	1.00
423_E	426_Y	0.707	1.00
153_V	404_V	0.705	1.00
411_T	414_S	0.704	1.00
459_V	472_F	0.700	1.00
119_G	352_F	0.697	1.00
489_P	494_L	0.697	1.00
497_I	504_I	0.697	1.00
120_A	152_S	0.697	1.00
299_F	302_S	0.696	1.00
55_L	238_A	0.696	1.00
398_I	401_L	0.695	1.00
467_F	475_Y	0.693	1.00
493_S	496_I	0.693	1.00
459_V	474_L	0.692	1.00
286_L	290_L	0.692	1.00
81_S	367_F	0.692	1.00
200_P	206_A	0.690	1.00
459_V	464_F	0.689	1.00
453_I	460_S	0.689	1.00
169_I	172_Y	0.686	1.00
375_M	379_L	0.685	1.00
23_W	175_S	0.682	1.00
343_M	346_A	0.682	1.00
113_G	403_G	0.679	1.00
413_I	416_V	0.675	1.00
412_V	416_V	0.673	1.00
199_T	293_H	0.670	1.00
74_A	87_F	0.670	1.00
26_F	272_G	0.669	1.00
379_L	392_S	0.669	1.00
366_L	395_I	0.669	1.00
359_V	363_T	0.668	1.00
108_F	358_L	0.667	1.00
85_Y	89_A	0.667	1.00
459_V	470_L	0.666	1.00
109_A	399_V	0.665	1.00
309_N	312_N	0.665	1.00
500_S	503_M	0.664	1.00
503_M	506_A	0.663	1.00
256_A	273_I	0.662	1.00
198_I	204_S	0.656	1.00
423_E	428_I	0.655	1.00
505_Y	508_S	0.654	1.00
313_S	316_Y	0.653	1.00
459_V	475_Y	0.649	1.00
468_G	476_Q	0.649	1.00
92_S	432_T	0.648	1.00
439_V	443_F	0.647	1.00
457_P	474_L	0.646	1.00
55_L	58_L	0.645	1.00
363_T	392_S	0.642	1.00
157_I	405_L	0.642	1.00
54_T	285_I	0.641	1.00
453_I	459_V	0.636	1.00
279_F	283_Y	0.636	1.00
470_L	476_Q	0.635	1.00
159_I	355_N	0.633	1.00
235_F	239_L	0.633	1.00
127_F	148_T	0.632	1.00
104_L	108_F	0.631	1.00
167_A	393_T	0.628	1.00
250_V	422_F	0.627	1.00
199_T	205_D	0.627	1.00
339_L	344_W	0.626	1.00
196_A	286_L	0.626	1.00
122_W	347_F	0.625	1.00
456_I	473_A	0.623	1.00
458_L	477_T	0.621	1.00
64_T	252_Y	0.621	1.00
168_S	393_T	0.620	1.00
487_N	496_I	0.620	1.00
384_E	390_L	0.620	1.00
231_F	235_F	0.618	1.00
123_F	159_I	0.618	1.00
68_A	252_Y	0.618	1.00
88_Q	432_T	0.617	1.00
487_N	493_S	0.617	1.00
493_S	497_I	0.617	1.00
174_W	178_F	0.617	1.00
370_A	379_L	0.616	1.00
75_S	256_A	0.614	1.00
167_A	360_I	0.614	1.00
299_F	331_L	0.613	1.00
488_F	494_L	0.613	1.00
464_F	470_L	0.612	1.00
415_I	420_V	0.611	1.00
441_K	447_V	0.607	1.00
30_F	181_G	0.607	1.00
465_P	477_T	0.606	1.00
464_F	477_T	0.605	1.00
125_Y	344_W	0.605	1.00
383_N	387_H	0.603	1.00
389_P	392_S	0.600	1.00
19_E	23_W	0.599	1.00
464_F	475_Y	0.598	1.00
430_A	466_E	0.598	1.00
60_S	246_W	0.597	1.00
200_P	205_D	0.596	1.00
183_V	187_S	0.594	1.00
39_I	42_V	0.594	1.00
111_S	114_L	0.592	1.00
492_L	497_I	0.591	1.00
506_A	509_Y	0.588	1.00
257_S	361_S	0.587	1.00
455_G	474_L	0.587	1.00
174_W	356_P	0.586	1.00
26_F	29_T	0.585	1.00
172_Y	175_S	0.585	1.00
51_A	297_E	0.584	1.00
340_Y	343_M	0.584	1.00
490_T	497_I	0.584	1.00
378_R	395_I	0.579	1.00
407_Y	410_V	0.579	1.00
250_V	426_Y	0.578	1.00
327_P	332_L	0.576	1.00
198_I	293_H	0.573	1.00
91_S	435_L	0.573	1.00
120_A	123_F	0.573	1.00
48_A	51_A	0.572	1.00
85_Y	97_A	0.572	1.00
275_I	278_L	0.572	1.00
21_S	171_K	0.571	1.00
25_S	258_W	0.571	1.00
456_I	474_L	0.570	1.00
181_G	184_S	0.570	1.00
153_V	156_G	0.570	1.00
428_I	434_A	0.569	1.00
431_L	464_F	0.569	1.00
384_E	387_H	0.569	1.00
62_L	462_I	0.567	1.00
414_S	418_V	0.565	1.00
364_R	367_F	0.565	1.00
428_I	432_T	0.563	1.00
362_L	366_L	0.562	1.00
290_L	293_H	0.560	1.00
459_V	467_F	0.559	1.00
163_G	352_F	0.558	1.00
77_S	441_K	0.558	1.00
260_G	367_F	0.558	1.00
471_L	475_Y	0.557	1.00
57_Y	248_Y	0.555	1.00
497_I	500_S	0.555	1.00
415_I	419_T	0.555	1.00
55_L	59_I	0.554	1.00
298_R	302_S	0.554	1.00
239_L	243_P	0.553	1.00
426_Y	429_F	0.552	1.00
459_V	469_F	0.551	1.00
85_Y	101_Y	0.549	1.00
173_G	360_I	0.548	1.00
60_S	249_Y	0.547	1.00
432_T	435_L	0.547	1.00
488_F	495_V	0.545	1.00
48_A	241_A	0.545	1.00
54_T	58_L	0.545	1.00
34_T	39_I	0.545	1.00
279_F	282_V	0.543	1.00
118_L	122_W	0.543	1.00
454_S	477_T	0.543	1.00
417_D	420_V	0.542	1.00
71_F	429_F	0.541	1.00
74_A	91_S	0.541	1.00
430_A	433_T	0.541	1.00
33_V	283_Y	0.539	1.00
38_P	188_T	0.539	1.00
466_E	472_F	0.539	1.00
84_D	253_N	0.538	1.00
504_I	510_I	0.537	1.00
59_I	242_I	0.537	1.00
439_V	442_N	0.536	1.00
75_S	269_S	0.535	1.00
237_G	240_L	0.535	1.00
309_N	315_V	0.534	1.00
51_A	54_T	0.534	1.00
126_L	344_W	0.534	1.00
498_Y	502_I	0.533	1.00
455_G	463_G	0.533	1.00
192_F	287_F	0.531	1.00
164_A	359_V	0.531	1.00
428_I	435_L	0.531	1.00
23_W	26_F	0.530	1.00
338_L	343_M	0.528	1.00
412_V	419_T	0.528	1.00
496_I	503_M	0.527	1.00
287_F	291_N	0.526	1.00
115_Y	355_N	0.526	1.00
183_V	349_L	0.525	1.00
467_F	476_Q	0.525	1.00
433_T	438_F	0.524	1.00
490_T	501_G	0.522	1.00
103_A	425_S	0.522	1.00
422_F	426_Y	0.521	1.00
159_I	352_F	0.520	1.00
56_S	245_V	0.520	1.00
41_I	291_N	0.520	1.00
178_F	182_I	0.518	1.00
489_P	504_I	0.518	1.00
161_I	164_A	0.518	1.00
460_S	469_F	0.517	1.00
416_V	420_V	0.516	1.00
414_S	417_D	0.516	1.00
342_V	346_A	0.516	1.00
159_I	163_G	0.515	1.00
456_I	477_T	0.515	1.00
109_A	403_G	0.515	1.00
115_Y	118_L	0.513	1.00
34_T	38_P	0.512	1.00
456_I	476_Q	0.511	1.00
160_L	401_L	0.511	1.00
172_Y	176_F	0.511	1.00
469_F	477_T	0.511	1.00
465_P	474_L	0.510	1.00
68_A	72_Y	0.509	1.00
65_L	277_V	0.509	1.00
84_D	257_S	0.509	1.00
29_T	272_G	0.508	1.00
104_L	425_S	0.508	1.00
455_G	464_F	0.507	1.00
229_L	232_V	0.506	1.00
72_Y	273_I	0.505	1.00
426_Y	430_A	0.505	1.00
161_I	394_I	0.505	1.00
402_I	405_L	0.503	1.00
113_G	116_S	0.502	1.00
70_L	463_G	0.501	1.00
38_P	184_S	0.501	1.00
113_G	400_G	0.501	1.00
297_E	301_T	0.500	1.00
364_R	389_P	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3l1lA	2	0.7864	100	0.419	Contact Map
4djkA	2	0.8223	100	0.439	Contact Map
3giaA	1	0.8053	100	0.454	Contact Map
2jlnA	1	0.8147	98.7	0.881	Contact Map
3dh4A	3	0.8393	98.3	0.896	Contact Map
2a65A	2	0.879	97.9	0.905	Contact Map
2xq2A	2	0.8412	97.8	0.907	Contact Map
4wgvA	2	0.7127	97.5	0.913	Contact Map
4xp4A	1	0.9036	97	0.92	Contact Map
4us3A	1	0.7864	97	0.921	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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