Q97VA6 - SULSO - GREMLIN Contacts

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Q97VA6 - Amino acid transporter, putative

UniProt:	Q97VA6	Sequences: MMEKSKKGAFLRESSGLVREFGILDALWFNIALLGLLFSTYYVASTGPLVGGNPLLGLLLPIVGFFLVGIIFSYVGSKVPRVAADYVYVSRNLHPALGFVGNAGYFLATVPLFMGITGITLQTFGLIPLLTILGYYTHNPSLIVVGSQIDSNPYLIMVIGAVEIVIMSLIPIFGNKVYRAFQWIAIPLALIAAIGMIIVEASVPHSLAIARLNNFASVYANVSNLYANVTSSNAPVPAYYNIYNIISLNPVYVVGFSYIINTIYVAGEVRNPKRSMPISILGTLIITGFIFTAALALEYNQFGYDFTTKMMYLSIVQGTLPIPTPYLDLLEGIASGNIVLGVLFALASIVQLLMYLSAASFVGSRLLFSYAMDRIMPDFVGDVSEKRHVPIKAIILSMIAGLIGLTVFTLPVTSAGAFLLSSVAVAILMLFPMAILSIAVLKTEKNENKIRIIAALSIIYLIYTFYQYLTVPAIGADSIVGYGILAGSIVILFIIFYVAKFIRARQGIDFNLIFKEIPPE	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	520 (426)
Sequences:	24550 (16149)
Seq/√Len:	782.4

ECOLI - PUUP ANSP GABP FRLA PLAP PROY LYSP AROP YIFK PHEP MMUP CYCA POTE ADIC GADC YBAT YJEM YGJI YCAM CADB ARCD YJEH
BACSU - ASPP YHDG YFNA YBGF AAPA YTNA YBXG YDGF ROCC STET HUTM YBEC YVBW GABP ROCE YECA ARCD YCGH YDAO GERBB GERAB YNDE
HALSA - Q9HHU7 Q9HQB3 Q9HSL5
SULSO - Q97VA6 Q97VA8 Q97WD4 Q97U33 Q97VR4 Q97XM0 Q97Z63 Q97X49 Q97WS3 Q97U05 Q97ZB5 Q7LXI7 Q97YN3 Q97Y76 Q97YX9 Q97U39

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
379_F	392_K	4.346	1.00
168_S	398_M	4.266	1.00
422_S	425_V	3.758	1.00
62_I	288_G	3.149	1.00
382_D	392_K	3.133	1.00
274_R	278_I	2.968	1.00
384_S	387_R	2.914	1.00
22_G	270_R	2.912	1.00
425_V	428_L	2.910	1.00
433_M	437_S	2.874	1.00
271_N	274_R	2.727	1.00
86_Y	373_D	2.705	1.00
488_S	492_L	2.695	1.00
269_V	275_S	2.622	1.00
371_A	381_G	2.616	1.00
384_S	391_I	2.585	1.00
102_N	370_Y	2.566	1.00
200_E	297_L	2.508	1.00
379_F	382_D	2.494	1.00
27_L	282_G	2.483	1.00
161_A	402_L	2.437	1.00
23_I	282_G	2.397	1.00
339_V	343_L	2.338	1.00
430_L	434_A	2.335	1.00
198_I	202_S	2.329	1.00
267_G	372_M	2.296	1.00
431_F	435_I	2.272	1.00
23_I	275_S	2.181	1.00
268_E	365_R	2.175	1.00
90_S	98_G	2.162	1.00
26_A	269_V	2.154	1.00
169_L	173_F	2.130	1.00
395_I	399_I	2.102	1.00
168_S	394_I	2.095	1.00
455_A	459_I	2.084	1.00
23_I	27_L	2.080	1.00
368_F	372_M	2.064	1.00
161_A	405_L	2.060	1.00
172_I	391_I	2.021	1.00
165_V	402_L	2.006	1.00
160_G	405_L	1.982	1.00
176_K	180_A	1.978	1.00
422_S	428_L	1.975	1.00
409_T	412_V	1.956	1.00
106_F	397_S	1.917	1.00
90_S	95_P	1.911	1.00
187_P	191_I	1.900	1.00
278_I	282_G	1.883	1.00
374_R	378_D	1.875	1.00
452_I	456_L	1.868	1.00
380_V	396_L	1.868	1.00
432_P	435_I	1.854	1.00
17_L	383_V	1.851	1.00
63_V	67_L	1.836	1.00
22_G	25_D	1.824	1.00
420_L	425_V	1.823	1.00
303_G	306_F	1.799	1.00
45_S	54_P	1.780	1.00
53_N	245_I	1.764	1.00
238_A	241_N	1.762	1.00
318_G	321_P	1.733	1.00
89_V	101_G	1.729	1.00
281_L	285_I	1.712	1.00
459_I	463_Y	1.696	1.00
171_P	357_S	1.685	1.00
25_D	183_W	1.680	1.00
165_V	398_M	1.677	1.00
384_S	389_V	1.664	1.00
271_N	275_S	1.659	1.00
438_I	441_L	1.643	1.00
429_M	432_P	1.637	1.00
64_G	460_Y	1.635	1.00
114_M	401_G	1.625	1.00
387_R	391_I	1.624	1.00
118_G	356_L	1.616	1.00
21_F	25_D	1.616	1.00
486_A	490_V	1.606	1.00
155_L	158_V	1.590	1.00
164_I	401_G	1.585	1.00
429_M	433_M	1.582	1.00
30_N	283_T	1.581	1.00
191_I	195_G	1.580	1.00
57_G	248_L	1.572	1.00
172_I	395_I	1.568	1.00
285_I	289_F	1.550	1.00
27_L	286_I	1.544	1.00
421_S	424_A	1.536	1.00
125_G	159_I	1.532	1.00
103_A	492_L	1.515	1.00
367_L	393_A	1.508	1.00
492_L	495_I	1.497	1.00
412_V	415_A	1.496	1.00
63_V	456_L	1.495	1.00
94_H	97_L	1.494	1.00
431_F	434_A	1.488	1.00
392_K	396_L	1.482	1.00
18_V	388_H	1.481	1.00
212_L	215_F	1.481	1.00
494_I	498_V	1.477	1.00
424_A	428_L	1.468	1.00
192_A	347_A	1.462	1.00
61_P	252_Y	1.458	1.00
425_V	430_L	1.456	1.00
173_F	387_R	1.444	1.00
449_K	453_I	1.428	1.00
363_G	397_S	1.416	1.00
265_V	361_F	1.414	1.00
67_L	456_L	1.413	1.00
154_Y	158_V	1.411	1.00
118_G	164_I	1.403	1.00
378_D	382_D	1.403	1.00
426_A	458_I	1.398	1.00
71_I	454_A	1.386	1.00
25_D	179_R	1.381	1.00
498_V	502_I	1.379	1.00
368_F	383_V	1.368	1.00
364_S	394_I	1.367	1.00
79_V	91_R	1.357	1.00
378_D	381_G	1.356	1.00
201_A	297_L	1.354	1.00
96_A	499_A	1.353	1.00
164_I	398_M	1.351	1.00
485_L	488_S	1.349	1.00
382_D	391_I	1.348	1.00
93_L	97_L	1.348	1.00
271_N	278_I	1.346	1.00
69_G	284_L	1.345	1.00
53_N	238_A	1.345	1.00
168_S	395_I	1.327	1.00
190_L	194_I	1.326	1.00
40_T	120_T	1.326	1.00
487_G	491_I	1.320	1.00
342_V	346_L	1.320	1.00
78_K	443_T	1.314	1.00
161_A	165_V	1.307	1.00
17_L	368_F	1.297	1.00
23_I	278_I	1.292	1.00
425_V	431_F	1.286	1.00
121_L	163_E	1.285	1.00
82_V	267_G	1.284	1.00
55_L	296_A	1.284	1.00
167_M	356_L	1.278	1.00
121_L	349_I	1.270	1.00
275_S	278_I	1.267	1.00
46_T	54_P	1.262	1.00
197_I	293_A	1.261	1.00
411_P	414_S	1.260	1.00
196_M	200_E	1.253	1.00
69_G	280_I	1.251	1.00
492_L	496_F	1.238	1.00
418_F	421_S	1.229	1.00
21_F	179_R	1.220	1.00
117_T	355_Y	1.220	1.00
419_L	422_S	1.219	1.00
21_F	26_A	1.218	1.00
410_L	414_S	1.217	1.00
367_L	376_M	1.215	1.00
87_V	91_R	1.208	1.00
70_I	281_L	1.207	1.00
202_S	207_L	1.203	1.00
272_P	277_P	1.200	1.00
304_Y	307_T	1.193	1.00
421_S	425_V	1.190	1.00
418_F	425_V	1.185	1.00
417_A	425_V	1.183	1.00
200_E	301_Q	1.181	1.00
439_A	442_K	1.179	1.00
433_M	436_L	1.179	1.00
289_F	293_A	1.173	1.00
418_F	422_S	1.161	1.00
26_A	279_S	1.160	1.00
429_M	434_A	1.158	1.00
31_I	286_I	1.155	1.00
422_S	426_A	1.151	1.00
24_L	28_W	1.150	1.00
157_M	161_A	1.150	1.00
437_S	440_V	1.137	1.00
452_I	455_A	1.134	1.00
463_Y	467_Q	1.133	1.00
422_S	430_L	1.129	1.00
72_F	85_D	1.128	1.00
181_F	185_A	1.126	1.00
99_F	103_A	1.124	1.00
436_L	439_A	1.121	1.00
499_A	502_I	1.120	1.00
270_R	275_S	1.114	1.00
497_Y	501_F	1.113	1.00
490_V	494_I	1.110	1.00
430_L	435_I	1.110	1.00
462_I	466_Y	1.105	1.00
485_L	489_I	1.100	1.00
392_K	395_I	1.100	1.00
30_N	262_T	1.099	1.00
170_I	181_F	1.097	1.00
439_A	443_T	1.091	1.00
81_R	87_V	1.091	1.00
410_L	425_V	1.090	1.00
418_F	428_L	1.085	1.00
182_Q	357_S	1.084	1.00
422_S	431_F	1.084	1.00
415_A	418_F	1.079	1.00
451_R	455_A	1.078	1.00
89_V	97_L	1.077	1.00
106_F	367_L	1.072	1.00
76_G	88_Y	1.072	1.00
450_I	454_A	1.064	1.00
211_R	215_F	1.059	1.00
162_V	166_I	1.056	1.00
91_R	438_I	1.056	1.00
372_M	381_G	1.056	1.00
195_G	199_V	1.052	1.00
246_I	463_Y	1.050	1.00
469_L	473_A	1.049	1.00
86_Y	369_S	1.046	1.00
469_L	472_P	1.041	1.00
29_F	265_V	1.038	1.00
152_N	155_L	1.033	1.00
320_L	323_P	1.024	1.00
488_S	495_I	1.023	1.00
383_V	388_H	1.016	1.00
495_I	499_A	1.010	1.00
168_S	172_I	1.005	1.00
158_V	162_V	1.004	1.00
194_I	198_I	1.003	1.00
241_N	244_N	1.003	1.00
449_K	452_I	1.001	1.00
180_A	184_I	1.000	1.00
498_V	501_F	0.996	1.00
438_I	442_K	0.994	1.00
493_F	497_Y	0.991	1.00
426_A	430_L	0.986	1.00
420_L	424_A	0.983	1.00
212_L	216_A	0.980	1.00
495_I	498_V	0.976	1.00
211_R	214_N	0.976	1.00
399_I	403_I	0.975	1.00
67_L	453_I	0.973	1.00
20_E	270_R	0.972	1.00
59_L	292_T	0.970	1.00
424_A	427_I	0.965	1.00
413_T	416_G	0.963	1.00
421_S	428_L	0.959	1.00
74_Y	77_S	0.958	1.00
437_S	441_L	0.953	1.00
94_H	500_K	0.951	1.00
172_I	384_S	0.951	1.00
172_I	389_V	0.950	1.00
489_I	492_L	0.948	1.00
416_G	419_L	0.948	1.00
81_R	91_R	0.948	1.00
185_A	354_M	0.946	1.00
175_N	361_F	0.945	1.00
213_N	216_A	0.937	1.00
266_A	276_M	0.930	1.00
430_L	433_M	0.929	1.00
207_L	300_N	0.929	1.00
31_I	287_T	0.921	1.00
457_S	461_L	0.918	1.00
338_I	342_V	0.914	1.00
122_Q	159_I	0.906	1.00
165_V	169_L	0.906	1.00
306_F	334_A	0.904	1.00
125_G	349_I	0.899	1.00
296_A	300_N	0.896	1.00
20_E	176_K	0.895	1.00
78_K	441_L	0.893	1.00
166_I	353_L	0.889	1.00
458_I	462_I	0.886	1.00
197_I	201_A	0.885	1.00
391_I	395_I	0.884	1.00
360_S	398_M	0.884	1.00
90_S	373_D	0.883	1.00
189_A	351_Q	0.881	1.00
260_I	264_Y	0.881	1.00
93_L	433_M	0.879	1.00
62_I	256_F	0.879	1.00
380_V	392_K	0.878	1.00
167_M	357_S	0.875	1.00
25_D	180_A	0.875	1.00
423_V	458_I	0.871	1.00
28_W	183_W	0.870	1.00
282_G	286_I	0.864	1.00
103_A	376_M	0.858	1.00
238_A	245_I	0.857	1.00
414_S	417_A	0.856	1.00
484_I	487_G	0.855	1.00
121_L	352_L	0.853	1.00
197_I	297_L	0.852	1.00
23_I	279_S	0.851	1.00
461_L	464_T	0.850	1.00
229_V	232_S	0.848	1.00
426_A	457_S	0.847	1.00
410_L	413_T	0.845	1.00
288_G	292_T	0.843	1.00
443_T	446_N	0.843	1.00
487_G	490_V	0.842	1.00
121_L	353_L	0.841	1.00
208_A	211_R	0.840	1.00
96_A	100_V	0.838	1.00
167_M	360_S	0.836	1.00
242_I	245_I	0.835	1.00
67_L	71_I	0.833	1.00
17_L	365_R	0.829	1.00
306_F	309_K	0.828	1.00
261_N	362_V	0.827	1.00
24_L	183_W	0.827	1.00
38_F	294_A	0.826	1.00
77_S	444_E	0.824	1.00
466_Y	470_T	0.823	1.00
116_I	254_V	0.823	1.00
190_L	290_I	0.819	1.00
83_A	87_V	0.818	1.00
472_P	475_G	0.818	1.00
417_A	420_L	0.818	1.00
464_T	468_Y	0.818	1.00
411_P	425_V	0.815	1.00
164_I	405_L	0.811	1.00
398_M	402_L	0.809	1.00
17_L	268_E	0.808	1.00
55_L	299_Y	0.805	1.00
68_V	461_L	0.805	1.00
59_L	63_V	0.804	1.00
66_F	70_I	0.804	1.00
485_L	490_V	0.795	1.00
411_P	422_S	0.791	1.00
169_L	172_I	0.791	1.00
332_G	338_I	0.787	1.00
484_I	488_S	0.786	1.00
336_G	340_L	0.783	1.00
417_A	421_S	0.783	1.00
78_K	444_E	0.783	1.00
74_Y	435_I	0.781	1.00
157_M	405_L	0.780	1.00
436_L	440_V	0.780	1.00
122_Q	160_G	0.777	1.00
465_F	468_Y	0.769	1.00
483_G	486_A	0.768	1.00
483_G	488_S	0.761	1.00
83_A	86_Y	0.759	1.00
409_T	415_A	0.757	1.00
420_L	434_A	0.757	1.00
486_A	489_I	0.757	1.00
463_Y	466_Y	0.756	1.00
384_S	388_H	0.755	1.00
432_P	436_L	0.754	1.00
409_T	414_S	0.753	1.00
54_P	295_L	0.753	1.00
113_F	116_I	0.753	1.00
50_V	53_N	0.750	1.00
418_F	424_A	0.749	1.00
105_Y	109_T	0.749	1.00
450_I	453_I	0.748	1.00
24_L	180_A	0.747	1.00
35_G	38_F	0.746	1.00
435_I	439_A	0.746	1.00
332_G	341_G	0.745	1.00
180_A	183_W	0.744	1.00
399_I	402_L	0.743	1.00
247_S	251_V	0.742	1.00
93_L	429_M	0.740	1.00
51_G	299_Y	0.737	1.00
416_G	420_L	0.737	1.00
201_A	293_A	0.736	1.00
277_P	280_I	0.736	1.00
159_I	162_V	0.736	1.00
420_L	430_L	0.735	1.00
422_S	434_A	0.735	1.00
66_F	281_L	0.734	1.00
319_T	323_P	0.733	1.00
411_P	415_A	0.728	1.00
32_A	186_I	0.728	1.00
34_L	189_A	0.726	1.00
429_M	435_I	0.724	1.00
425_V	434_A	0.724	1.00
339_V	342_V	0.724	1.00
173_F	177_V	0.721	1.00
376_M	380_V	0.721	1.00
34_L	37_L	0.721	1.00
179_R	183_W	0.719	1.00
488_S	493_F	0.718	1.00
483_G	487_G	0.713	1.00
161_A	406_T	0.713	1.00
488_S	491_I	0.710	1.00
211_R	216_A	0.708	1.00
417_A	422_S	0.708	1.00
492_L	499_A	0.708	1.00
457_S	460_Y	0.705	1.00
412_V	416_G	0.703	1.00
491_I	495_I	0.702	1.00
273_K	444_E	0.702	1.00
489_I	493_F	0.702	1.00
96_A	493_F	0.700	1.00
485_L	492_L	0.700	1.00
412_V	422_S	0.697	1.00
491_I	494_I	0.696	1.00
420_L	423_V	0.693	1.00
273_K	442_K	0.693	1.00
71_I	457_S	0.690	1.00
417_A	428_L	0.690	1.00
56_L	245_I	0.689	1.00
163_E	356_L	0.687	1.00
293_A	297_L	0.686	1.00
364_S	393_A	0.685	1.00
75_V	88_Y	0.684	1.00
412_V	425_V	0.682	1.00
423_V	427_I	0.682	1.00
367_L	396_L	0.681	1.00
56_L	59_L	0.681	1.00
67_L	457_S	0.680	1.00
20_E	175_N	0.679	1.00
122_Q	156_I	0.678	1.00
179_R	357_S	0.677	1.00
410_L	421_S	0.677	1.00
360_S	364_S	0.677	1.00
390_P	393_A	0.677	1.00
118_G	122_Q	0.675	1.00
465_F	473_A	0.675	1.00
27_L	279_S	0.675	1.00
115_G	118_G	0.674	1.00
371_A	380_V	0.674	1.00
171_P	394_I	0.671	1.00
33_L	358_A	0.671	1.00
172_I	387_R	0.670	1.00
27_L	30_N	0.667	1.00
437_S	442_K	0.666	1.00
451_R	454_A	0.666	1.00
380_V	393_A	0.664	1.00
35_G	39_S	0.663	1.00
409_T	413_T	0.663	1.00
447_E	453_I	0.660	1.00
82_V	368_F	0.659	1.00
332_G	337_N	0.658	1.00
422_S	429_M	0.656	1.00
113_F	117_T	0.654	1.00
109_T	359_A	0.653	1.00
468_Y	472_P	0.653	1.00
238_A	242_I	0.652	1.00
420_L	426_A	0.651	1.00
244_N	247_S	0.650	1.00
435_I	438_I	0.650	1.00
86_Y	90_S	0.650	1.00
417_A	424_A	0.649	1.00
86_Y	98_G	0.648	1.00
209_I	213_N	0.647	1.00
69_G	259_I	0.647	1.00
207_L	212_L	0.645	1.00
31_I	186_I	0.644	1.00
419_L	423_V	0.643	1.00
42_Y	295_L	0.641	1.00
496_F	500_K	0.641	1.00
20_E	24_L	0.640	1.00
425_V	432_P	0.639	1.00
122_Q	125_G	0.638	1.00
414_S	422_S	0.638	1.00
86_Y	102_N	0.637	1.00
413_T	417_A	0.636	1.00
74_Y	445_K	0.635	1.00
172_I	394_I	0.635	1.00
441_L	444_E	0.634	1.00
153_P	156_I	0.634	1.00
379_F	396_L	0.633	1.00
75_V	92_N	0.631	1.00
65_F	259_I	0.630	1.00
471_V	475_G	0.629	1.00
76_G	263_I	0.629	1.00
434_A	439_A	0.629	1.00
365_R	368_F	0.628	1.00
171_P	361_F	0.625	1.00
119_I	410_L	0.625	1.00
409_T	425_V	0.624	1.00
415_A	422_S	0.624	1.00
242_I	246_I	0.624	1.00
60_L	249_N	0.623	1.00
128_P	131_T	0.623	1.00
197_I	294_A	0.623	1.00
496_F	499_A	0.622	1.00
263_I	280_I	0.622	1.00
40_T	43_V	0.620	1.00
297_L	300_N	0.619	1.00
454_A	458_I	0.618	1.00
76_G	276_M	0.614	1.00
167_M	353_L	0.613	1.00
461_L	465_F	0.612	1.00
294_A	298_E	0.611	1.00
286_I	290_I	0.610	1.00
157_M	160_G	0.610	1.00
101_G	424_A	0.609	1.00
70_I	453_I	0.608	1.00
304_Y	308_T	0.608	1.00
74_Y	448_N	0.607	1.00
488_S	496_F	0.607	1.00
70_I	448_N	0.607	1.00
188_L	192_A	0.606	1.00
264_Y	362_V	0.606	1.00
363_G	367_L	0.606	1.00
267_G	368_F	0.605	1.00
117_T	120_T	0.605	1.00
425_V	429_M	0.604	1.00
412_V	428_L	0.601	1.00
428_L	431_F	0.600	1.00
199_V	203_V	0.599	1.00
164_I	402_L	0.599	1.00
282_G	285_I	0.598	1.00
489_I	495_I	0.597	1.00
414_S	418_F	0.597	1.00
115_G	404_G	0.596	1.00
188_L	347_A	0.595	1.00
207_L	211_R	0.594	1.00
482_Y	485_L	0.593	1.00
434_A	438_I	0.593	1.00
52_G	56_L	0.592	1.00
416_G	421_S	0.591	1.00
35_G	291_F	0.591	1.00
305_D	309_K	0.589	1.00
482_Y	486_A	0.588	1.00
466_Y	469_L	0.587	1.00
34_L	39_S	0.587	1.00
35_G	40_T	0.587	1.00
432_P	455_A	0.587	1.00
85_D	260_I	0.586	1.00
24_L	27_L	0.585	1.00
271_N	277_P	0.585	1.00
486_A	492_L	0.584	1.00
343_L	347_A	0.584	1.00
485_L	496_F	0.584	1.00
269_V	276_M	0.583	1.00
35_G	42_Y	0.583	1.00
178_Y	361_F	0.582	1.00
257_S	260_I	0.581	1.00
199_V	335_S	0.581	1.00
445_K	448_N	0.581	1.00
42_Y	298_E	0.580	1.00
183_W	187_P	0.580	1.00
61_P	253_V	0.580	1.00
440_V	443_T	0.579	1.00
85_D	264_Y	0.579	1.00
84_A	263_I	0.579	1.00
58_L	255_G	0.578	1.00
177_V	181_F	0.577	1.00
61_P	256_F	0.577	1.00
488_S	500_K	0.576	1.00
199_V	337_N	0.576	1.00
127_I	131_T	0.574	1.00
276_M	280_I	0.574	1.00
386_K	391_I	0.573	1.00
229_V	233_N	0.572	1.00
421_S	430_L	0.572	1.00
246_I	467_Q	0.571	1.00
410_L	422_S	0.570	1.00
175_N	265_V	0.566	1.00
493_F	496_F	0.562	1.00
330_L	334_A	0.562	1.00
410_L	417_A	0.561	1.00
424_A	430_L	0.561	1.00
428_L	434_A	0.561	1.00
174_G	177_V	0.561	1.00
115_G	401_G	0.560	1.00
30_N	279_S	0.559	1.00
39_S	189_A	0.558	1.00
447_E	450_I	0.558	1.00
418_F	426_A	0.557	1.00
44_A	47_G	0.556	1.00
29_F	32_A	0.555	1.00
421_S	426_A	0.555	1.00
426_A	461_L	0.554	1.00
36_L	254_V	0.554	1.00
38_F	42_Y	0.552	1.00
104_G	108_A	0.552	1.00
33_L	359_A	0.550	1.00
351_Q	354_M	0.550	1.00
268_E	390_P	0.549	1.00
411_P	416_G	0.549	1.00
168_S	360_S	0.548	1.00
230_T	233_N	0.547	1.00
396_L	400_A	0.545	1.00
162_V	165_V	0.545	1.00
203_V	208_A	0.544	1.00
124_F	348_S	0.543	1.00
45_S	252_Y	0.542	1.00
55_L	59_L	0.541	1.00
346_L	350_V	0.541	1.00
38_F	193_A	0.539	1.00
239_Y	242_I	0.539	1.00
482_Y	488_S	0.539	1.00
470_T	474_I	0.539	1.00
305_D	308_T	0.538	1.00
450_I	455_A	0.537	1.00
428_L	432_P	0.536	1.00
494_I	497_Y	0.536	1.00
177_V	180_A	0.536	1.00
125_G	163_E	0.535	1.00
434_A	437_S	0.534	1.00
26_A	265_V	0.531	1.00
165_V	168_S	0.530	1.00
45_S	49_L	0.530	1.00
427_I	458_I	0.530	1.00
68_V	260_I	0.529	1.00
335_S	340_L	0.525	1.00
81_R	267_G	0.525	1.00
93_L	431_F	0.524	1.00
487_G	492_L	0.523	1.00
57_G	252_Y	0.522	1.00
449_K	454_A	0.522	1.00
490_V	493_F	0.522	1.00
120_T	124_F	0.521	1.00
488_S	494_I	0.521	1.00
39_S	43_V	0.521	1.00
33_L	261_N	0.521	1.00
117_T	122_Q	0.520	1.00
431_F	436_L	0.519	1.00
483_G	492_L	0.519	1.00
73_S	280_I	0.519	1.00
443_T	447_E	0.518	1.00
365_R	390_P	0.518	1.00
17_L	82_V	0.518	1.00
269_V	279_S	0.516	1.00
49_L	248_L	0.514	1.00
342_V	345_A	0.513	1.00
486_A	493_F	0.513	1.00
403_I	406_T	0.513	1.00
286_I	289_F	0.511	1.00
460_Y	464_T	0.509	1.00
437_S	443_T	0.508	1.00
118_G	121_L	0.507	1.00
418_F	423_V	0.506	1.00
203_V	335_S	0.505	1.00
41_Y	44_A	0.505	1.00
264_Y	366_L	0.505	1.00
188_L	350_V	0.505	1.00
207_L	297_L	0.505	1.00
268_E	383_V	0.505	1.00
455_A	458_I	0.504	1.00
469_L	474_I	0.504	1.00
49_L	52_G	0.504	1.00
402_L	405_L	0.504	1.00
482_Y	496_F	0.502	1.00
470_T	473_A	0.502	1.00
436_L	442_K	0.501	1.00
21_F	175_N	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3l1lA	2	0.7962	100	0.377	Contact Map
4djkA	2	0.8173	100	0.409	Contact Map
3giaA	1	0.8192	100	0.413	Contact Map
2jlnA	1	0.8019	99	0.86	Contact Map
3dh4A	3	0.8538	98.4	0.888	Contact Map
2xq2A	2	0.8558	98.2	0.894	Contact Map
4xp4A	1	0.8942	97.4	0.911	Contact Map
4wgvA	2	0.7173	97.3	0.913	Contact Map
2a65A	2	0.8827	97	0.917	Contact Map
4us3A	1	0.8019	96.8	0.919	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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