GREMLIN Database
Q97V62 - Acetolactate synthase large subunit homolog (IlvB-4)
UniProt: Q97V62 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 531 (509)
Sequences: 14276 (9119)
Seq/√Len: 404.2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
478_K481_E4.9851.00
355_V497_K3.7911.00
448_E515_R3.7371.00
56_A86_A3.5401.00
488_I502_E3.4221.00
228_E248_H3.3101.00
492_D495_D3.0601.00
18_T68_N3.0411.00
489_E517_H3.0391.00
359_T501_E2.8931.00
198_R323_K2.8731.00
14_S43_E2.7411.00
65_L411_S2.7221.00
311_A316_F2.6131.00
488_I512_T2.5841.00
486_N510_S2.5771.00
19_D45_R2.5391.00
214_L223_I2.5261.00
247_N383_Y2.5131.00
355_V358_E2.5051.00
491_K495_D2.4021.00
200_A290_L2.3481.00
488_I499_S2.2961.00
404_S418_S2.2961.00
74_S83_S2.2541.00
475_D478_K2.2301.00
269_L313_A2.2011.00
263_G266_L2.1771.00
489_E515_R2.1731.00
358_E497_K2.1421.00
486_N502_E2.1371.00
7_E34_E2.1261.00
69_V155_L2.1251.00
411_S414_R2.1221.00
49_P55_G2.1021.00
268_A271_T2.0871.00
426_Q483_I2.0541.00
125_E128_R2.0511.00
292_V316_F2.0261.00
87_L99_L2.0191.00
203_F265_C2.0011.00
98_V151_F2.0011.00
81_T85_T1.9991.00
479_V482_G1.9931.00
203_F288_R1.9741.00
101_S163_Y1.9541.00
229_K321_V1.9521.00
11_D15_S1.9471.00
490_V499_S1.9321.00
361_S364_R1.9061.00
212_L227_I1.9041.00
477_T487_V1.8871.00
203_F307_V1.8841.00
146_I164_I1.8721.00
357_D381_K1.8691.00
194_K319_E1.8321.00
204_L267_I1.8141.00
202_N206_E1.8021.00
486_N512_T1.7921.00
229_K325_N1.7891.00
7_E37_K1.7861.00
408_K441_N1.7751.00
425_F429_F1.7721.00
69_V98_V1.7671.00
60_D64_R1.7631.00
497_K501_E1.7561.00
225_N229_K1.7421.00
227_I234_V1.7331.00
199_E202_N1.7171.00
446_L513_V1.7081.00
495_D498_K1.7021.00
224_L228_E1.6981.00
193_T196_E1.6951.00
503_A514_L1.6901.00
491_K517_H1.6741.00
212_L267_I1.6591.00
436_A485_V1.6521.00
354_K358_E1.6361.00
139_S142_D1.6341.00
212_L232_I1.6201.00
365_V407_G1.6041.00
369_D420_I1.6041.00
399_S403_A1.5961.00
498_K502_E1.5761.00
351_Y493_R1.5661.00
359_T497_K1.5651.00
356_L419_I1.5611.00
269_L292_V1.5551.00
11_D14_S1.5541.00
207_C210_P1.5501.00
481_E486_N1.5291.00
196_E199_E1.5281.00
389_F407_G1.5141.00
22_G46_Y1.5041.00
135_F164_I1.5021.00
66_K410_A1.4991.00
351_Y355_V1.4971.00
369_D424_G1.4961.00
231_G250_L1.4951.00
131_T163_Y1.4941.00
201_L323_K1.4931.00
477_T489_E1.4931.00
32_Y46_Y1.4911.00
299_F310_K1.4801.00
408_K440_I1.4781.00
12_T148_E1.4691.00
262_P332_K1.4671.00
364_R415_Q1.4491.00
387_S414_R1.4361.00
54_G431_E1.4361.00
498_K501_E1.4341.00
9_L166_V1.4321.00
334_E337_N1.4301.00
445_V514_L1.4291.00
435_A485_V1.4151.00
355_V359_T1.4121.00
445_V500_V1.3931.00
432_L485_V1.3881.00
288_R306_E1.3881.00
204_L265_C1.3871.00
332_K336_K1.3831.00
435_A442_F1.3811.00
69_V151_F1.3801.00
9_L147_M1.3791.00
132_K160_G1.3731.00
140_P173_E1.3701.00
265_C290_L1.3681.00
417_V504_V1.3631.00
49_P58_M1.3611.00
409_I440_I1.3601.00
234_V244_I1.3601.00
225_N321_V1.3571.00
352_L516_V1.3521.00
477_T481_E1.3491.00
362_E383_Y1.3431.00
100_I166_V1.3411.00
106_F169_D1.3391.00
429_F479_V1.3331.00
45_R438_Y1.3281.00
83_S99_L1.3271.00
415_Q504_V1.3261.00
445_V516_V1.3261.00
365_V411_S1.3251.00
331_Y335_E1.3231.00
19_D409_I1.3231.00
201_L320_I1.3221.00
361_S415_Q1.3191.00
192_P316_F1.3181.00
329_W333_V1.3171.00
56_A83_S1.3091.00
501_E507_S1.3001.00
479_V483_I1.2971.00
207_C265_C1.2931.00
443_L503_A1.2871.00
418_S444_T1.2841.00
408_K415_Q1.2831.00
360_L417_V1.2811.00
441_N510_S1.2801.00
98_V154_A1.2801.00
226_Y230_L1.2771.00
14_S42_G1.2601.00
347_I516_V1.2591.00
335_E339_D1.2591.00
441_N509_K1.2581.00
118_G125_E1.2521.00
211_I263_G1.2511.00
226_Y317_L1.2501.00
450_G473_Q1.2481.00
478_K482_G1.2481.00
319_E322_E1.2481.00
87_L97_L1.2471.00
145_I149_R1.2451.00
405_I435_A1.2411.00
224_L245_P1.2361.00
314_E318_E1.2321.00
236_T251_Y1.2321.00
226_Y321_V1.2271.00
197_V323_K1.2261.00
362_E384_K1.2231.00
80_F101_S1.2231.00
315_A318_E1.2161.00
397_M427_G1.2141.00
47_Y409_I1.2131.00
142_D145_I1.2111.00
62_Y410_A1.2081.00
300_N305_A1.2031.00
21_F62_Y1.2011.00
137_I143_V1.1951.00
12_T147_M1.1921.00
365_V416_I1.1891.00
147_M164_I1.1891.00
198_R202_N1.1871.00
480_V485_V1.1861.00
199_E203_F1.1801.00
20_V35_L1.1781.00
480_V513_V1.1761.00
8_L175_G1.1761.00
4_T174_K1.1731.00
269_L317_L1.1701.00
312_S315_A1.1691.00
167_P170_V1.1691.00
137_I146_I1.1681.00
63_A96_P1.1681.00
258_L262_P1.1671.00
496_L516_V1.1671.00
84_L126_M1.1601.00
224_L244_I1.1591.00
126_M130_A1.1521.00
347_I352_L1.1521.00
18_T45_R1.1501.00
327_P331_Y1.1481.00
201_L324_V1.1451.00
331_Y334_E1.1411.00
17_V71_V1.1401.00
212_L226_Y1.1391.00
107_K169_D1.1351.00
433_I437_Q1.1311.00
480_V487_V1.1271.00
60_D89_G1.1261.00
6_S34_E1.1241.00
88_V394_F1.1221.00
499_S514_L1.1221.00
330_S334_E1.1191.00
223_I317_L1.1191.00
65_L407_G1.1181.00
135_F146_I1.1171.00
244_I248_H1.1151.00
135_F149_R1.1141.00
9_L100_I1.1121.00
34_E37_K1.1101.00
60_D95_S1.1091.00
205_S325_N1.1061.00
214_L218_A1.0991.00
334_E338_S1.0991.00
209_K262_P1.0971.00
5_T143_V1.0961.00
218_A223_I1.0951.00
4_T7_E1.0911.00
191_Y319_E1.0911.00
153_I162_V1.0881.00
201_L205_S1.0861.00
485_V513_V1.0841.00
19_D47_Y1.0811.00
106_F173_E1.0801.00
81_T126_M1.0801.00
488_I514_L1.0801.00
84_L130_A1.0771.00
486_N508_L1.0761.00
415_Q443_L1.0711.00
496_L500_V1.0711.00
360_L366_I1.0671.00
408_K412_P1.0661.00
225_N228_E1.0661.00
241_K246_E1.0641.00
54_G428_C1.0641.00
28_G31_L1.0621.00
487_V513_V1.0611.00
194_K323_K1.0601.00
450_G517_H1.0601.00
200_A309_I1.0561.00
337_N340_I1.0561.00
443_L512_T1.0551.00
61_Y65_L1.0531.00
210_P264_D1.0481.00
47_Y438_Y1.0461.00
56_A72_F1.0451.00
366_I380_I1.0451.00
192_P319_E1.0451.00
305_A308_T1.0431.00
155_L159_M1.0421.00
228_E250_L1.0381.00
212_L223_I1.0311.00
109_R136_R1.0301.00
363_D414_R1.0281.00
72_F83_S1.0261.00
252_A259_K1.0201.00
91_Y161_P1.0191.00
200_A307_V1.0181.00
131_T134_S1.0171.00
8_L144_P1.0151.00
280_R283_I1.0151.00
508_L512_T1.0091.00
224_L248_H1.0071.00
503_A512_T0.9991.00
191_Y315_A0.9981.00
227_I250_L0.9961.00
408_K416_I0.9951.00
20_V71_V0.9931.00
315_A319_E0.9911.00
226_Y324_V0.9891.00
9_L31_L0.9871.00
211_I235_F0.9871.00
225_N318_E0.9871.00
367_I416_I0.9841.00
446_L476_Y0.9721.00
408_K413_E0.9721.00
490_V495_D0.9651.00
400_A418_S0.9631.00
134_S163_Y0.9631.00
227_I244_I0.9611.00
425_F446_L0.9611.00
72_F99_L0.9601.00
443_L504_V0.9581.00
499_S503_A0.9561.00
353_A419_I0.9561.00
490_V496_L0.9561.00
133_A146_I0.9541.00
206_E288_R0.9491.00
103_N165_E0.9471.00
401_I425_F0.9461.00
332_K335_E0.9441.00
477_T515_R0.9441.00
124_L134_S0.9431.00
74_S99_L0.9431.00
268_A273_F0.9421.00
432_L513_V0.9421.00
348_T522_S0.9421.00
133_A153_I0.9411.00
367_I418_S0.9371.00
495_D499_S0.9351.00
68_N155_L0.9351.00
205_S324_V0.9341.00
235_F252_A0.9321.00
439_K509_K0.9321.00
433_I483_I0.9301.00
359_T500_V0.9281.00
87_L127_A0.9271.00
56_A97_L0.9241.00
485_V511_P0.9241.00
149_R153_I0.9221.00
80_F127_A0.9211.00
211_I266_L0.9171.00
425_F513_V0.9171.00
326_L330_S0.9151.00
202_N205_S0.9151.00
7_E11_D0.9121.00
435_A444_T0.9111.00
447_V518_V0.9101.00
207_C264_D0.9021.00
5_T140_P0.9011.00
333_V337_N0.9011.00
432_L444_T0.9011.00
219_S243_S0.9001.00
443_L514_L0.8991.00
384_K387_S0.8991.00
352_L447_V0.8981.00
154_A162_V0.8981.00
64_R95_S0.8971.00
337_N341_V0.8951.00
429_F483_I0.8931.00
357_D380_I0.8921.00
464_G467_F0.8911.00
230_L324_V0.8891.00
456_R470_D0.8881.00
333_V340_I0.8841.00
125_E129_Q0.8811.00
124_L136_R0.8811.00
499_S502_E0.8801.00
351_Y496_L0.8761.00
200_A203_F0.8761.00
19_D62_Y0.8751.00
246_E251_Y0.8711.00
206_E265_C0.8691.00
377_A419_I0.8691.00
61_Y403_A0.8671.00
81_T88_V0.8651.00
33_E36_R0.8641.00
406_G410_A0.8641.00
225_N325_N0.8601.00
408_K510_S0.8591.00
292_V309_I0.8591.00
435_A511_P0.8581.00
194_K198_R0.8571.00
35_L44_I0.8521.00
133_A150_A0.8521.00
335_E338_S0.8511.00
30_S172_E0.8461.00
31_L166_V0.8441.00
195_E198_R0.8441.00
12_T15_S0.8431.00
209_K264_D0.8411.00
502_E508_L0.8401.00
364_R417_V0.8391.00
437_Q472_F0.8391.00
203_F290_L0.8381.00
353_A447_V0.8361.00
98_V155_L0.8361.00
442_F511_P0.8351.00
166_V171_L0.8351.00
333_V336_K0.8351.00
481_E487_V0.8351.00
71_V98_V0.8351.00
423_L452_Q0.8331.00
450_G520_P0.8321.00
475_D489_E0.8301.00
205_S323_K0.8301.00
58_M435_A0.8291.00
200_A265_C0.8281.00
84_L127_A0.8281.00
419_I447_V0.8261.00
258_L261_I0.8241.00
336_K339_D0.8231.00
296_V310_K0.8201.00
318_E322_E0.8181.00
359_T504_V0.8181.00
475_D481_E0.8181.00
85_T396_A0.8151.00
211_I260_E0.8151.00
355_V496_L0.8121.00
197_V319_E0.8091.00
14_S18_T0.8091.00
299_F308_T0.8051.00
28_G73_L0.8051.00
13_I71_V0.8041.00
319_E323_K0.7991.00
214_L236_T0.7981.00
405_I440_I0.7981.00
426_Q429_F0.7971.00
214_L234_V0.7951.00
309_I316_F0.7941.00
57_I396_A0.7911.00
494_K498_K0.7901.00
65_L389_F0.7901.00
417_V445_V0.7891.00
357_D383_Y0.7861.00
443_L509_K0.7861.00
212_L269_L0.7861.00
17_V151_F0.7831.00
363_D384_K0.7821.00
205_S322_E0.7801.00
152_K156_E0.7751.00
199_E307_V0.7751.00
368_S388_Y0.7731.00
404_S442_F0.7721.00
448_E517_H0.7721.00
4_T34_E0.7701.00
192_P197_V0.7691.00
244_I251_Y0.7691.00
247_N362_E0.7681.00
328_K331_Y0.7681.00
200_A316_F0.7651.00
133_A149_R0.7641.00
73_L100_I0.7631.00
140_P144_P0.7621.00
33_E37_K0.7611.00
136_R165_E0.7581.00
133_A162_V0.7551.00
466_T470_D0.7531.00
65_L410_A0.7501.00
267_I292_V0.7471.00
465_N468_T0.7461.00
369_D400_A0.7431.00
24_P48_M0.7421.00
401_I444_T0.7411.00
373_N424_G0.7391.00
63_A95_S0.7371.00
18_T62_Y0.7361.00
21_F58_M0.7331.00
487_V515_R0.7331.00
336_K340_I0.7321.00
216_Y239_R0.7311.00
183_K186_N0.7301.00
456_R460_K0.7301.00
23_I83_S0.7271.00
110_H116_D0.7261.00
329_W332_K0.7261.00
436_A511_P0.7251.00
353_A380_I0.7251.00
347_I493_R0.7251.00
146_I149_R0.7241.00
53_Y82_N0.7241.00
318_E321_V0.7201.00
31_L73_L0.7201.00
419_I445_V0.7201.00
88_V130_A0.7201.00
20_V73_L0.7161.00
368_S377_A0.7141.00
365_V414_R0.7141.00
124_L128_R0.7131.00
94_G158_K0.7131.00
255_I260_E0.7121.00
45_R412_P0.7101.00
132_K162_V0.7091.00
31_L171_L0.7091.00
49_P54_G0.7081.00
436_A484_G0.7071.00
245_P248_H0.7061.00
213_L268_A0.7051.00
101_S165_E0.7051.00
28_G32_Y0.7041.00
436_A472_F0.7031.00
435_A440_I0.7011.00
81_T84_L0.6991.00
426_Q474_I0.6981.00
322_E325_N0.6971.00
149_R152_K0.6961.00
360_L364_R0.6961.00
415_Q441_N0.6951.00
132_K153_I0.6951.00
245_P383_Y0.6951.00
367_I407_G0.6931.00
417_V443_L0.6931.00
444_T485_V0.6921.00
218_A243_S0.6911.00
196_E200_A0.6911.00
278_T281_W0.6901.00
426_Q476_Y0.6891.00
236_T246_E0.6891.00
18_T43_E0.6881.00
212_L234_V0.6831.00
144_P148_E0.6821.00
62_Y68_N0.6821.00
19_D68_N0.6811.00
63_A97_L0.6800.99
368_S390_N0.6790.99
330_S337_N0.6780.99
95_S399_S0.6770.99
106_F138_Y0.6760.99
74_S101_S0.6730.99
401_I431_E0.6720.99
74_S80_F0.6710.99
189_L312_S0.6700.99
465_N469_T0.6690.99
451_V456_R0.6690.99
75_V115_H0.6690.99
445_V496_L0.6670.99
62_Y66_K0.6660.99
265_C288_R0.6660.99
210_P265_C0.6660.99
321_V325_N0.6660.99
425_F476_Y0.6650.99
231_G249_P0.6650.99
467_F470_D0.6650.99
132_K157_D0.6650.99
229_K324_V0.6640.99
217_G293_D0.6630.99
91_Y132_K0.6630.99
209_K329_W0.6630.99
405_I434_T0.6620.99
192_P315_A0.6600.99
316_F319_E0.6590.99
115_H118_G0.6580.99
208_S264_D0.6570.99
352_L445_V0.6550.99
140_P170_V0.6550.99
203_F206_E0.6550.99
81_T117_S0.6550.99
106_F167_P0.6540.99
291_H305_A0.6510.99
210_P232_I0.6510.99
418_S424_G0.6500.99
328_K332_K0.6500.99
466_T469_T0.6490.99
56_A99_L0.6490.99
15_S181_K0.6470.99
213_L237_T0.6460.99
238_I378_M0.6460.99
485_V510_S0.6460.99
87_L130_A0.6460.99
367_I389_F0.6460.99
191_Y194_K0.6440.99
347_I492_D0.6440.99
20_V44_I0.6420.99
490_V514_L0.6380.99
140_P175_G0.6380.99
82_N85_T0.6360.99
90_A97_L0.6350.99
10_I42_G0.6320.99
409_I438_Y0.6310.99
474_I482_G0.6310.99
103_N109_R0.6300.99
5_T8_L0.6280.99
402_P431_E0.6280.99
338_S341_V0.6280.99
127_A163_Y0.6270.99
30_S171_L0.6260.99
242_G246_E0.6250.99
151_F155_L0.6220.99
404_S416_I0.6210.99
153_I157_D0.6210.99
50_R437_Q0.6200.99
373_N447_V0.6190.99
420_I444_T0.6180.99
196_E309_I0.6180.99
464_G469_T0.6170.99
509_K512_T0.6170.99
351_Y497_K0.6160.99
352_L496_L0.6160.99
204_L230_L0.6150.99
492_D498_K0.6120.99
345_S493_R0.6110.99
488_I508_L0.6110.99
401_I435_A0.6100.99
401_I420_I0.6100.99
57_I89_G0.6070.99
407_G416_I0.6070.99
367_I400_A0.6060.99
221_S312_S0.6050.99
213_L271_T0.6030.99
346_E519_S0.6030.99
389_F399_S0.6020.99
142_D146_I0.6020.99
441_N511_P0.6010.99
231_G330_S0.5990.99
36_R466_T0.5970.99
316_F320_I0.5970.99
365_V389_F0.5970.99
433_I474_I0.5970.99
356_L445_V0.5920.99
230_L250_L0.5910.99
299_F305_A0.5910.99
51_L82_N0.5900.99
92_S394_F0.5880.99
69_V154_A0.5880.99
475_D515_R0.5870.99
293_D298_V0.5870.99
499_S512_T0.5870.99
268_A289_I0.5870.99
205_S208_S0.5860.99
420_I428_C0.5850.98
368_S371_G0.5850.98
474_I479_V0.5830.98
12_T151_F0.5830.98
353_A357_D0.5810.98
100_I147_M0.5790.98
225_N322_E0.5790.98
47_Y434_T0.5790.98
377_A388_Y0.5790.98
465_N470_D0.5790.98
106_F139_S0.5780.98
295_D298_V0.5760.98
425_F444_T0.5760.98
58_M409_I0.5730.98
135_F162_V0.5720.98
219_S386_N0.5700.98
189_L315_A0.5700.98
63_A70_G0.5690.98
436_A439_K0.5690.98
12_T144_P0.5690.98
364_R414_R0.5690.98
60_D403_A0.5670.98
189_L193_T0.5670.98
28_G102_L0.5660.98
224_L227_I0.5640.98
61_Y406_G0.5640.98
23_I452_Q0.5640.98
150_A164_I0.5630.98
345_S492_D0.5630.98
490_V498_K0.5630.98
98_V162_V0.5630.98
45_R409_I0.5620.98
193_T315_A0.5610.98
15_S177_F0.5610.98
117_S123_Q0.5590.98
197_V309_I0.5590.98
223_I227_I0.5590.98
313_A318_E0.5590.98
65_L365_V0.5580.98
241_K382_V0.5570.98
444_T513_V0.5570.98
157_D160_G0.5570.98
106_F170_V0.5570.98
137_I167_P0.5560.98
194_K322_E0.5550.98
443_L510_S0.5550.98
236_T241_K0.5540.98
213_L266_L0.5530.98
334_E340_I0.5510.98
368_S400_A0.5510.98
144_P147_M0.5490.98
257_N261_I0.5490.98
132_K156_E0.5490.98
420_I424_G0.5480.98
246_E381_K0.5470.98
26_T75_V0.5470.98
456_R520_P0.5470.98
464_G468_T0.5470.98
360_L380_I0.5460.98
23_I49_P0.5450.98
326_L333_V0.5440.98
21_F409_I0.5430.98
96_P154_A0.5430.98
56_A87_L0.5430.98
71_V151_F0.5430.98
363_D415_Q0.5420.98
250_L330_S0.5420.98
343_N494_K0.5420.98
18_T66_K0.5420.98
101_S123_Q0.5410.97
493_R497_K0.5410.97
429_F482_G0.5410.97
152_K155_L0.5410.97
14_S44_I0.5410.97
239_R392_L0.5400.97
242_G387_S0.5400.97
350_D522_S0.5390.97
88_V117_S0.5390.97
502_E512_T0.5390.97
443_L508_L0.5390.97
439_K510_S0.5390.97
169_D173_E0.5380.97
236_T243_S0.5380.97
64_R93_E0.5380.97
8_L177_F0.5370.97
227_I230_L0.5370.97
100_I164_I0.5370.97
222_N386_N0.5360.97
434_T440_I0.5350.97
488_I498_K0.5350.97
330_S333_V0.5350.97
55_G72_F0.5350.97
83_S101_S0.5340.97
103_N136_R0.5340.97
98_V164_I0.5340.97
50_R433_I0.5330.97
71_V100_I0.5330.97
153_I156_E0.5310.97
141_E176_D0.5310.97
114_L395_N0.5300.97
431_E434_T0.5300.97
284_K287_D0.5280.97
445_V503_A0.5280.97
91_Y131_T0.5270.97
298_V301_T0.5270.97
360_L504_V0.5270.97
26_T458_N0.5260.97
252_A256_F0.5250.97
351_Y354_K0.5240.97
63_A69_V0.5230.97
436_A510_S0.5220.97
237_T240_G0.5220.97
349_H376_M0.5220.97
500_V504_V0.5210.97
62_Y70_G0.5210.97
426_Q430_N0.5210.97
10_I35_L0.5190.97
196_E307_V0.5190.97
326_L329_W0.5170.97
123_Q163_Y0.5170.97
128_R134_S0.5160.97
481_E488_I0.5150.97
353_A377_A0.5150.97
434_T438_Y0.5150.97
327_P330_S0.5130.97
327_P334_E0.5130.97
367_I403_A0.5120.97
293_D296_V0.5120.97
490_V516_V0.5090.96
188_T193_T0.5090.96
195_E199_E0.5080.96
248_H252_A0.5080.96
37_K464_G0.5070.96
145_I148_E0.5060.96
292_V313_A0.5060.96
83_S86_A0.5040.96
455_L459_Q0.5040.96
137_I164_I0.5040.96
475_D482_G0.5040.96
474_I483_I0.5030.96
346_E351_Y0.5030.96
5_T173_E0.5020.96
9_L143_V0.5020.96
216_Y272_S0.5010.96
33_E466_T0.5000.96
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
1ozhA 4 0.9699 100 0.166 Contact Map
2ihtA 4 0.9718 100 0.174 Contact Map
1ybhA 4 0.9812 100 0.177 Contact Map
1t9bA 2 0.9831 100 0.177 Contact Map
4rjjA 5 0.9774 100 0.178 Contact Map
2uz1A 4 0.9755 100 0.182 Contact Map
2panA 3 0.9831 100 0.183 Contact Map
3eyaA 5 0.951 100 0.186 Contact Map
2pgnA 4 0.968 100 0.19 Contact Map
3lq1A 4 0.8945 100 0.198 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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