Q7LXY2 - SULSO - GREMLIN Contacts

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Q7LXY2 - Uncharacterized protein

UniProt:	Q7LXY2	Sequences: MILNILLNLAIFIIPSLAVWNQIILYIFGKSGDIANLILLNNESNLPKLSIIVPTKGERIEVIQGLIDNIHEAIWDRNKLEIIIVSDDEQEYFDKLLSTLIIPPDLDVRIFRREKKLGYKSGALAFGLQKSTGDLILTLDVDARIEKDSLIKAYNHMVNLGCDAITMEWHGYSNISTSLAKALMVSTVLTSKSILRGRDKLGLKVLPIGCGTIYKRSALEAVNGWDYKMIQDDYELGARLINKGFKVCASSSPVYVEVPDNLIAFYVQQTRWAMGTMEVLYWRFKYIISSDIKLWQKLEIIAYLSQYIPIILTFISAIIFAIAGFVGIRLSMNLPMFIIWAITLSIYASIFVNSAKKSGIDTVTAIKALGRLSAYTVGISPFLLIGTINAFKKTRTYIVTPKGKKAKSNIGYPILAFGVFFILSAFLYMFRGDFLTFIWLAYYSIAFLYTFIAYIKGL	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	458 (388)
Sequences:	8936 (6547)
Seq/√Len:	332.4

ECOLI - BCSA PGAC YAIP
BACSU - YDAM
HALSA - Q9HSB1
SULSO - Q7LXY2 Q97UK7 Q97W52 Q97YM4 Q97TY0 Q97WK7

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
59_R	92_Y	5.000	1.00
74_I	151_I	4.923	1.00
216_R	220_E	4.688	1.00
135_L	154_Y	3.617	1.00
50_S	133_G	3.495	1.00
81_E	109_R	3.457	1.00
52_I	85_V	3.171	1.00
137_L	213_I	3.139	1.00
218_A	245_F	3.072	1.00
92_Y	95_K	3.017	1.00
81_E	133_G	3.007	1.00
50_S	81_E	2.998	1.00
135_L	157_M	2.828	1.00
152_K	251_S	2.823	1.00
221_A	243_K	2.808	1.00
85_V	127_G	2.780	1.00
86_S	112_R	2.683	1.00
162_C	248_C	2.680	1.00
94_D	98_S	2.660	1.00
148_D	152_K	2.608	1.00
86_S	89_E	2.466	1.00
135_L	213_I	2.441	1.00
49_L	154_Y	2.436	1.00
53_V	70_I	2.404	1.00
177_T	180_A	2.376	1.00
49_L	150_L	2.341	1.00
261_N	264_A	2.244	1.00
207_P	212_T	2.223	1.00
340_W	344_L	2.208	1.00
307_Y	311_I	2.197	1.00
153_A	213_I	2.171	1.00
163_D	245_F	2.125	1.00
50_S	131_S	2.088	1.00
74_I	148_D	2.055	1.00
95_K	99_T	2.036	1.00
217_S	221_A	2.015	1.00
159_N	246_K	2.010	1.00
161_G	246_K	2.002	1.00
97_L	110_I	1.990	1.00
64_Q	68_D	1.962	1.00
48_K	132_T	1.922	1.00
370_G	373_S	1.907	1.00
48_K	134_D	1.894	1.00
48_K	79_K	1.882	1.00
50_S	83_I	1.880	1.00
268_Q	272_W	1.862	1.00
293_K	296_Q	1.837	1.00
383_L	386_G	1.837	1.00
76_D	79_K	1.834	1.00
164_A	247_V	1.828	1.00
221_A	245_F	1.815	1.00
69_N	145_I	1.793	1.00
57_G	89_E	1.770	1.00
64_Q	99_T	1.763	1.00
307_Y	310_I	1.759	1.00
92_Y	96_L	1.726	1.00
25_L	28_F	1.716	1.00
25_L	29_G	1.715	1.00
157_M	213_I	1.710	1.00
48_K	133_G	1.693	1.00
340_W	343_T	1.674	1.00
341_A	344_L	1.661	1.00
218_A	240_L	1.661	1.00
93_F	97_L	1.638	1.00
18_A	22_Q	1.636	1.00
382_F	386_G	1.630	1.00
48_K	81_E	1.596	1.00
186_S	269_Q	1.595	1.00
137_L	150_L	1.592	1.00
46_L	76_D	1.575	1.00
135_L	215_K	1.565	1.00
235_E	239_R	1.565	1.00
397_Y	402_K	1.558	1.00
47_P	154_Y	1.558	1.00
373_S	377_V	1.557	1.00
73_A	150_L	1.550	1.00
111_F	130_K	1.532	1.00
22_Q	25_L	1.532	1.00
21_N	25_L	1.516	1.00
47_P	75_W	1.514	1.00
171_G	258_V	1.480	1.00
20_W	24_I	1.470	1.00
127_G	131_S	1.466	1.00
81_E	132_T	1.440	1.00
64_Q	96_L	1.440	1.00
143_A	254_V	1.434	1.00
231_Q	275_G	1.427	1.00
343_T	346_I	1.407	1.00
84_I	97_L	1.405	1.00
131_S	216_R	1.401	1.00
98_S	112_R	1.398	1.00
303_Y	306_Q	1.397	1.00
74_I	147_K	1.392	1.00
128_L	136_I	1.392	1.00
152_K	155_N	1.368	1.00
136_I	219_L	1.358	1.00
121_S	125_A	1.346	1.00
85_V	123_A	1.341	1.00
120_K	124_L	1.335	1.00
316_S	320_F	1.327	1.00
17_L	21_N	1.321	1.00
17_L	20_W	1.316	1.00
58_E	141_V	1.316	1.00
19_V	22_Q	1.315	1.00
145_I	149_S	1.315	1.00
15_P	18_A	1.313	1.00
50_S	216_R	1.310	1.00
86_S	94_D	1.310	1.00
379_I	383_L	1.305	1.00
15_P	22_Q	1.302	1.00
16_S	20_W	1.277	1.00
293_K	297_K	1.271	1.00
69_N	144_R	1.260	1.00
75_W	154_Y	1.257	1.00
337_F	340_W	1.247	1.00
299_E	303_Y	1.244	1.00
51_I	137_L	1.242	1.00
134_D	217_S	1.241	1.00
339_I	343_T	1.240	1.00
20_W	28_F	1.238	1.00
164_A	240_L	1.234	1.00
18_A	21_N	1.232	1.00
15_P	19_V	1.229	1.00
68_D	100_L	1.227	1.00
373_S	376_T	1.227	1.00
126_F	130_K	1.225	1.00
96_L	99_T	1.217	1.00
173_S	180_A	1.216	1.00
95_K	98_S	1.215	1.00
136_I	216_R	1.213	1.00
275_G	278_E	1.208	1.00
24_I	28_F	1.208	1.00
55_T	63_I	1.208	1.00
107_D	113_R	1.202	1.00
303_Y	307_Y	1.191	1.00
336_M	340_W	1.191	1.00
164_A	207_P	1.190	1.00
296_Q	299_E	1.189	1.00
336_M	344_L	1.182	1.00
19_V	26_Y	1.179	1.00
340_W	347_Y	1.177	1.00
21_N	28_F	1.175	1.00
9_L	13_I	1.173	1.00
306_Q	310_I	1.171	1.00
306_Q	309_P	1.166	1.00
10_A	14_I	1.157	1.00
169_W	210_C	1.150	1.00
75_W	80_L	1.149	1.00
139_L	145_I	1.144	1.00
124_L	225_W	1.143	1.00
286_Y	289_S	1.141	1.00
22_Q	26_Y	1.140	1.00
344_L	348_A	1.131	1.00
14_I	18_A	1.122	1.00
67_I	100_L	1.120	1.00
83_I	109_R	1.118	1.00
149_S	211_G	1.115	1.00
21_N	29_G	1.112	1.00
361_D	364_T	1.110	1.00
70_I	145_I	1.109	1.00
15_P	25_L	1.106	1.00
379_I	382_F	1.102	1.00
63_I	84_I	1.093	1.00
133_G	216_R	1.093	1.00
353_N	357_K	1.088	1.00
344_L	347_Y	1.085	1.00
51_I	73_A	1.077	1.00
365_A	368_A	1.074	1.00
94_D	112_R	1.068	1.00
105_D	108_V	1.067	1.00
15_P	21_N	1.058	1.00
336_M	343_T	1.052	1.00
322_I	326_V	1.048	1.00
43_E	46_L	1.047	1.00
364_T	367_K	1.045	1.00
88_D	91_E	1.042	1.00
14_I	22_Q	1.042	1.00
14_I	17_L	1.037	1.00
11_I	22_Q	1.033	1.00
72_E	147_K	1.027	1.00
57_G	90_Q	1.027	1.00
70_I	82_I	1.022	1.00
156_H	248_C	1.020	1.00
338_I	341_A	1.020	1.00
18_A	28_F	1.019	1.00
292_I	296_Q	1.013	1.00
26_Y	29_G	1.011	1.00
302_A	306_Q	1.009	1.00
285_K	289_S	1.006	1.00
143_A	256_V	1.005	1.00
124_L	138_T	1.004	1.00
80_L	150_L	1.003	1.00
399_V	402_K	0.999	1.00
341_A	345_S	0.998	1.00
355_A	358_S	0.996	1.00
397_Y	401_P	0.987	1.00
22_Q	29_G	0.983	1.00
153_A	167_M	0.982	1.00
303_Y	310_I	0.980	1.00
265_F	269_Q	0.975	1.00
111_F	127_G	0.972	1.00
75_W	79_K	0.969	1.00
222_V	240_L	0.969	1.00
381_P	384_L	0.967	1.00
183_L	186_S	0.967	1.00
162_C	165_I	0.966	1.00
146_E	255_Y	0.964	1.00
343_T	347_Y	0.963	1.00
65_G	68_D	0.963	1.00
265_F	268_Q	0.963	1.00
342_I	346_I	0.960	1.00
320_F	323_A	0.954	1.00
71_H	105_D	0.946	1.00
63_I	93_F	0.945	1.00
295_W	299_E	0.944	1.00
306_Q	311_I	0.935	1.00
13_I	17_L	0.935	1.00
241_I	247_V	0.933	1.00
379_I	386_G	0.933	1.00
385_I	389_N	0.929	1.00
163_D	218_A	0.924	1.00
68_D	72_E	0.922	1.00
224_G	228_K	0.914	1.00
211_G	254_V	0.914	1.00
23_I	27_I	0.914	1.00
166_T	169_W	0.912	1.00
144_R	172_Y	0.912	1.00
294_L	298_L	0.911	1.00
42_N	45_N	0.904	1.00
93_F	96_L	0.903	1.00
137_L	149_S	0.900	1.00
317_A	324_G	0.900	1.00
163_D	215_K	0.898	1.00
346_I	351_F	0.897	1.00
354_S	357_K	0.896	1.00
9_L	20_W	0.890	1.00
55_T	93_F	0.888	1.00
348_A	351_F	0.888	1.00
125_A	128_L	0.888	1.00
11_I	14_I	0.887	1.00
372_L	376_T	0.886	1.00
123_A	127_G	0.885	1.00
313_T	317_A	0.884	1.00
19_V	25_L	0.881	1.00
63_I	67_I	0.878	1.00
97_L	100_L	0.878	1.00
163_D	240_L	0.877	1.00
11_I	19_V	0.872	1.00
17_L	22_Q	0.871	1.00
46_L	79_K	0.870	1.00
11_I	28_F	0.866	1.00
240_L	245_F	0.864	1.00
20_W	25_L	0.863	1.00
188_V	191_S	0.862	1.00
22_Q	28_F	0.861	1.00
111_F	126_F	0.859	1.00
109_R	114_E	0.857	1.00
125_A	129_Q	0.853	1.00
225_W	228_K	0.852	1.00
347_Y	351_F	0.850	1.00
307_Y	312_L	0.849	1.00
183_L	187_T	0.846	1.00
157_M	162_C	0.844	1.00
96_L	100_L	0.840	1.00
368_A	376_T	0.837	1.00
314_F	318_I	0.835	1.00
19_V	23_I	0.835	1.00
107_D	112_R	0.834	1.00
382_F	385_I	0.833	1.00
18_A	25_L	0.830	1.00
66_L	70_I	0.829	1.00
28_F	32_G	0.829	1.00
153_A	165_I	0.825	1.00
306_Q	312_L	0.824	1.00
11_I	18_A	0.823	1.00
368_A	371_R	0.822	1.00
224_G	229_M	0.820	1.00
217_S	220_E	0.817	1.00
11_I	15_P	0.815	1.00
378_G	382_F	0.814	1.00
126_F	129_Q	0.812	1.00
51_I	150_L	0.811	1.00
237_G	247_V	0.808	1.00
57_G	91_E	0.808	1.00
17_L	24_I	0.808	1.00
81_E	131_S	0.805	1.00
344_L	351_F	0.805	1.00
317_A	321_A	0.804	1.00
10_A	18_A	0.801	1.00
14_I	24_I	0.799	1.00
215_K	245_F	0.797	1.00
296_Q	300_I	0.795	1.00
347_Y	350_I	0.794	1.00
14_I	25_L	0.793	1.00
230_I	275_G	0.790	1.00
368_A	373_S	0.790	1.00
46_L	151_I	0.788	1.00
51_I	80_L	0.788	1.00
113_R	126_F	0.788	1.00
15_P	28_F	0.787	1.00
324_G	327_G	0.779	1.00
366_I	370_G	0.777	1.00
16_S	19_V	0.774	1.00
87_D	113_R	0.773	1.00
38_I	41_N	0.768	1.00
342_I	345_S	0.766	1.00
364_T	368_A	0.764	1.00
337_F	342_I	0.762	1.00
343_T	350_I	0.761	1.00
290_S	297_K	0.760	1.00
187_T	191_S	0.760	1.00
301_I	307_Y	0.760	1.00
176_S	260_D	0.759	1.00
24_I	29_G	0.757	1.00
18_A	24_I	0.756	1.00
210_C	268_Q	0.752	0.99
128_L	131_S	0.751	0.99
17_L	29_G	0.748	0.99
10_A	17_L	0.748	0.99
338_I	342_I	0.743	0.99
331_S	335_P	0.743	0.99
10_A	13_I	0.742	0.99
71_H	100_L	0.740	0.99
290_S	296_Q	0.739	0.99
297_K	301_I	0.738	0.99
342_I	349_S	0.738	0.99
367_K	370_G	0.738	0.99
232_D	275_G	0.738	0.99
83_I	127_G	0.737	0.99
20_W	29_G	0.737	0.99
386_G	389_N	0.735	0.99
348_A	352_V	0.731	0.99
148_D	151_I	0.730	0.99
167_M	252_S	0.729	0.99
196_R	250_S	0.729	0.99
12_F	15_P	0.728	0.99
94_D	97_L	0.725	0.99
143_A	211_G	0.725	0.99
206_L	234_Y	0.725	0.99
187_T	198_R	0.725	0.99
166_T	207_P	0.723	0.99
47_P	133_G	0.722	0.99
55_T	141_V	0.720	0.99
210_C	256_V	0.718	0.99
224_G	227_Y	0.718	0.99
18_A	29_G	0.717	0.99
89_E	93_F	0.717	0.99
316_S	319_I	0.716	0.99
15_P	20_W	0.712	0.99
300_I	303_Y	0.712	0.99
312_L	315_I	0.711	0.99
357_K	364_T	0.710	0.99
317_A	320_F	0.706	0.99
378_G	386_G	0.704	0.99
226_D	229_M	0.704	0.99
242_N	283_R	0.704	0.99
383_L	387_T	0.701	0.99
368_A	377_V	0.698	0.99
376_T	379_I	0.696	0.99
333_N	343_T	0.696	0.99
359_G	362_T	0.695	0.99
11_I	17_L	0.694	0.99
318_I	321_A	0.694	0.99
105_D	111_F	0.694	0.99
268_Q	271_R	0.693	0.99
337_F	352_V	0.692	0.99
143_A	210_C	0.690	0.99
274_M	278_E	0.689	0.99
369_L	373_S	0.683	0.99
371_R	376_T	0.681	0.99
109_R	112_R	0.679	0.99
167_M	211_G	0.678	0.99
363_V	367_K	0.677	0.99
13_I	20_W	0.675	0.99
313_T	316_S	0.675	0.99
128_L	138_T	0.674	0.99
382_F	390_A	0.674	0.99
380_S	383_L	0.673	0.99
121_S	124_L	0.672	0.99
338_I	346_I	0.672	0.99
172_Y	257_E	0.672	0.99
321_A	324_G	0.670	0.99
12_F	18_A	0.669	0.99
169_W	187_T	0.668	0.99
169_W	256_V	0.668	0.99
346_I	350_I	0.667	0.99
73_A	145_I	0.667	0.99
345_S	348_A	0.665	0.99
86_S	142_D	0.665	0.99
30_K	33_D	0.665	0.99
18_A	26_Y	0.664	0.99
339_I	346_I	0.662	0.99
339_I	342_I	0.659	0.99
138_T	207_P	0.658	0.99
316_S	324_G	0.656	0.99
156_H	165_I	0.656	0.99
223_N	226_D	0.655	0.99
333_N	347_Y	0.655	0.99
316_S	328_I	0.654	0.99
337_F	346_I	0.653	0.99
259_P	268_Q	0.652	0.99
16_S	25_L	0.652	0.99
353_N	358_S	0.651	0.99
15_P	23_I	0.651	0.99
159_N	248_C	0.651	0.99
354_S	358_S	0.650	0.99
15_P	29_G	0.649	0.99
137_L	153_A	0.649	0.99
256_V	259_P	0.649	0.99
336_M	346_I	0.649	0.99
320_F	328_I	0.649	0.99
17_L	28_F	0.649	0.99
66_L	71_H	0.648	0.99
299_E	302_A	0.648	0.99
349_S	352_V	0.646	0.98
296_Q	303_Y	0.646	0.98
232_D	279_V	0.646	0.98
15_P	24_I	0.644	0.98
11_I	21_N	0.644	0.98
150_L	213_I	0.641	0.98
329_R	332_M	0.640	0.98
291_D	297_K	0.640	0.98
140_D	209_G	0.632	0.98
138_T	212_T	0.630	0.98
71_H	108_V	0.630	0.98
166_T	171_G	0.627	0.98
109_R	130_K	0.627	0.98
333_N	344_L	0.625	0.98
292_I	297_K	0.624	0.98
53_V	66_L	0.623	0.98
311_I	315_I	0.622	0.98
23_I	26_Y	0.621	0.98
320_F	327_G	0.621	0.98
301_I	306_Q	0.620	0.98
267_V	398_I	0.619	0.98
52_I	131_S	0.619	0.98
16_S	22_Q	0.619	0.98
218_A	221_A	0.618	0.98
66_L	139_L	0.618	0.98
269_Q	272_W	0.618	0.98
14_I	21_N	0.617	0.98
199_D	248_C	0.616	0.98
195_L	198_R	0.616	0.98
14_I	23_I	0.615	0.98
301_I	305_S	0.614	0.98
375_Y	378_G	0.614	0.98
310_I	314_F	0.613	0.98
15_P	26_Y	0.611	0.98
19_V	28_F	0.609	0.98
63_I	97_L	0.607	0.98
337_F	344_L	0.607	0.98
14_I	19_V	0.606	0.98
20_W	26_Y	0.605	0.98
47_P	158_V	0.602	0.98
340_W	345_S	0.601	0.98
9_L	17_L	0.600	0.98
124_L	128_L	0.600	0.98
169_W	208_I	0.598	0.97
66_L	69_N	0.598	0.97
377_V	380_S	0.597	0.97
335_P	338_I	0.597	0.97
59_R	93_F	0.596	0.97
329_R	333_N	0.596	0.97
46_L	75_W	0.595	0.97
302_A	305_S	0.595	0.97
146_E	253_P	0.592	0.97
297_K	300_I	0.592	0.97
226_D	239_R	0.591	0.97
10_A	25_L	0.589	0.97
21_N	24_I	0.589	0.97
17_L	26_Y	0.589	0.97
26_Y	31_S	0.588	0.97
352_V	356_K	0.587	0.97
225_W	229_M	0.587	0.97
290_S	293_K	0.586	0.97
111_F	114_E	0.586	0.97
353_N	356_K	0.586	0.97
74_I	146_E	0.586	0.97
162_C	246_K	0.586	0.97
143_A	169_W	0.583	0.97
71_H	107_D	0.582	0.97
226_D	282_W	0.581	0.97
187_T	195_L	0.581	0.97
108_V	111_F	0.581	0.97
272_W	275_G	0.581	0.97
107_D	111_F	0.581	0.97
381_P	386_G	0.580	0.97
57_G	93_F	0.579	0.97
333_N	337_F	0.577	0.97
308_I	311_I	0.577	0.97
310_I	313_T	0.576	0.97
168_E	249_A	0.576	0.97
183_L	258_V	0.575	0.97
124_L	127_G	0.574	0.97
47_P	135_L	0.573	0.97
195_L	249_A	0.573	0.97
36_N	40_L	0.572	0.97
17_L	25_L	0.571	0.97
315_I	318_I	0.569	0.97
10_A	19_V	0.569	0.97
104_P	107_D	0.569	0.97
359_G	364_T	0.568	0.97
190_T	195_L	0.567	0.97
299_E	307_Y	0.564	0.96
212_T	237_G	0.564	0.96
139_L	211_G	0.564	0.96
91_E	95_K	0.561	0.96
368_A	372_L	0.560	0.96
62_V	141_V	0.558	0.96
223_N	229_M	0.558	0.96
381_P	385_I	0.557	0.96
210_C	231_Q	0.556	0.96
67_I	84_I	0.554	0.96
319_I	322_I	0.554	0.96
91_E	94_D	0.554	0.96
270_T	385_I	0.552	0.96
384_L	388_I	0.552	0.96
71_H	82_I	0.551	0.96
347_Y	352_V	0.551	0.96
319_I	323_A	0.550	0.96
332_M	336_M	0.549	0.96
360_I	365_A	0.549	0.96
58_E	87_D	0.548	0.96
153_A	252_S	0.548	0.96
19_V	29_G	0.548	0.96
114_E	117_L	0.547	0.96
117_L	122_G	0.546	0.96
284_F	289_S	0.545	0.96
335_P	339_I	0.545	0.96
317_A	323_A	0.545	0.96
336_M	339_I	0.543	0.96
89_E	123_A	0.543	0.96
121_S	275_G	0.542	0.96
25_L	33_D	0.541	0.96
52_I	128_L	0.541	0.96
9_L	30_K	0.539	0.95
187_T	258_V	0.538	0.95
298_L	302_A	0.537	0.95
63_I	96_L	0.537	0.95
265_F	272_W	0.536	0.95
121_S	232_D	0.536	0.95
210_C	275_G	0.536	0.95
384_L	387_T	0.534	0.95
376_T	382_F	0.533	0.95
319_I	324_G	0.533	0.95
341_A	348_A	0.532	0.95
176_S	180_A	0.531	0.95
62_V	257_E	0.530	0.95
333_N	336_M	0.529	0.95
16_S	21_N	0.529	0.95
357_K	361_D	0.529	0.95
256_V	268_Q	0.528	0.95
332_M	344_L	0.527	0.95
109_R	113_R	0.526	0.95
323_A	326_V	0.526	0.95
179_L	185_V	0.525	0.95
44_S	47_P	0.525	0.95
94_D	110_I	0.524	0.95
180_A	183_L	0.524	0.95
24_I	27_I	0.523	0.95
365_A	370_G	0.523	0.95
350_I	354_S	0.522	0.95
338_I	352_V	0.522	0.95
9_L	16_S	0.520	0.94
74_I	80_L	0.520	0.94
324_G	328_I	0.520	0.94
191_S	208_I	0.519	0.94
70_I	73_A	0.518	0.94
106_L	111_F	0.517	0.94
372_L	377_V	0.516	0.94
364_T	371_R	0.513	0.94
313_T	320_F	0.511	0.94
368_A	374_A	0.511	0.94
318_I	324_G	0.510	0.94
49_L	135_L	0.510	0.94
214_Y	240_L	0.509	0.94
376_T	380_S	0.508	0.94
57_G	86_S	0.507	0.94
223_N	228_K	0.504	0.94
56_K	116_K	0.504	0.94
362_T	365_A	0.502	0.93
56_K	88_D	0.500	0.93

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4p02A	1	0.9694	100	0.329	Contact Map
2z86A	2	0.6223	100	0.584	Contact Map
3bcvA	2	0.3952	100	0.603	Contact Map
1qg8A	1	0.4672	100	0.614	Contact Map
1xhbA	1	0.8712	100	0.625	Contact Map
3ckjA	2	0.6026	100	0.627	Contact Map
3l7iA	4	0.1638	100	0.639	Contact Map
2bo4A	4	0.7227	100	0.639	Contact Map
2d7iA	1	0.7729	100	0.641	Contact Map
2nxvA	4	0.5284	100	0.651	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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