GREMLIN Database
Q7LXU1 - Uncharacterized protein
UniProt: Q7LXU1 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 510 (500)
Sequences: 155 (114)
Seq/√Len: 5.1

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
258_I270_A6.1220.99
390_K425_E5.4350.98
269_F383_I3.7210.86
135_F167_S3.0030.71
267_T293_M2.8940.68
253_A277_Y2.8490.67
402_A415_E2.7050.63
415_E424_T2.6070.60
31_G259_A2.6010.60
145_I151_P2.5800.59
17_L33_I2.5630.58
108_T112_I2.5320.57
287_I309_I2.5170.57
254_E277_Y2.4920.56
90_L205_I2.4720.55
234_K431_F2.4610.55
204_I404_L2.4480.55
158_P253_A2.4380.54
289_S303_S2.4150.54
132_F227_I2.4050.53
453_I475_I2.3910.53
326_Y331_N2.3880.53
241_L388_V2.3280.51
158_P277_Y2.3190.50
158_P254_E2.3080.50
199_R311_E2.2790.49
456_I476_V2.2230.47
287_I312_L2.1860.46
135_F179_I2.1530.45
307_A388_V2.0970.43
234_K364_F2.0750.43
17_L184_I2.0300.41
158_P282_K2.0280.41
366_N369_D2.0140.41
293_M319_S2.0130.41
137_D155_K2.0030.40
289_S304_K1.9750.39
16_L62_K1.9710.39
172_L175_D1.9590.39
387_N485_Y1.9530.39
167_S172_L1.9260.38
383_I388_V1.9240.38
434_Q460_I1.9160.38
65_K381_I1.8990.37
402_A424_T1.8880.37
62_K114_D1.8770.36
168_N421_T1.8720.36
277_Y282_K1.8540.36
34_L55_E1.8460.35
35_I184_I1.8330.35
147_E197_I1.8260.35
449_M488_K1.8140.34
307_A325_V1.7910.34
82_S85_G1.7900.34
16_L440_V1.7860.34
281_G424_T1.7800.33
216_R496_L1.7680.33
166_L210_Y1.7580.33
119_Q195_I1.7480.33
10_M100_C1.7450.32
102_M182_E1.7430.32
33_I184_I1.7100.31
42_E48_N1.6960.31
487_R490_V1.6920.31
249_L275_E1.6910.31
155_K213_V1.6800.31
244_R277_Y1.6770.31
163_F283_I1.6740.30
304_K318_L1.6580.30
16_L114_D1.6520.30
287_I341_L1.6380.29
13_K88_N1.6100.29
259_A499_K1.6060.29
254_E282_K1.5900.28
65_K105_A1.5880.28
183_I214_I1.5870.28
237_E279_R1.5830.28
460_I496_L1.5780.28
336_K424_T1.5670.28
63_K66_D1.5640.27
147_E199_R1.5590.27
192_G416_I1.5550.27
135_F171_M1.5430.27
269_F358_I1.5400.27
8_D388_V1.5360.27
81_N86_E1.5260.26
225_I413_V1.5200.26
232_V326_Y1.5100.26
233_R315_I1.5010.26
70_R99_G1.4990.26
141_M272_A1.4820.25
149_T172_L1.4770.25
329_M364_F1.4730.25
158_P177_K1.4720.25
332_D346_I1.4720.25
118_I393_T1.4650.25
101_I119_Q1.4610.25
241_L381_I1.4610.25
57_A115_V1.4540.25
251_E426_Y1.4530.25
160_N465_T1.4480.25
16_L65_K1.4470.25
109_Q497_E1.4450.24
304_K341_L1.4440.24
364_F435_T1.4430.24
64_L502_I1.4400.24
142_S429_Y1.4380.24
105_A392_Y1.4320.24
42_E88_N1.4280.24
242_D420_V1.4180.24
128_Q453_I1.4150.24
249_L311_E1.4090.24
46_E87_A1.4060.24
304_K438_V1.4060.24
16_L160_N1.4050.24
326_Y341_L1.4030.23
380_I439_P1.4030.23
35_I110_K1.3990.23
15_A123_L1.3990.23
253_A282_K1.3890.23
118_I181_N1.3850.23
45_K431_F1.3810.23
20_V220_S1.3800.23
82_S87_A1.3780.23
391_V425_E1.3740.23
58_L466_V1.3710.23
267_T435_T1.3710.23
319_S493_L1.3700.23
219_L346_I1.3640.23
16_L61_V1.3630.23
102_M210_Y1.3630.23
219_L319_S1.3610.23
137_D140_T1.3590.22
147_E289_S1.3590.22
183_I460_I1.3580.22
213_V341_L1.3560.22
41_A86_E1.3480.22
110_K114_D1.3480.22
110_K120_Y1.3470.22
24_L33_I1.3420.22
325_V496_L1.3410.22
148_D426_Y1.3410.22
35_I469_E1.3380.22
36_H219_L1.3360.22
42_E87_A1.3330.22
158_P273_L1.3220.22
369_D373_I1.3180.22
233_R275_E1.3140.21
35_I381_I1.3120.21
39_L325_V1.3090.21
43_L57_A1.3060.21
366_N477_I1.3050.21
80_E247_K1.3050.21
75_F168_N1.2970.21
172_L179_I1.2930.21
125_P393_T1.2910.21
146_K222_G1.2890.21
172_L388_V1.2870.21
99_G233_R1.2850.21
417_K424_T1.2780.21
207_L214_I1.2780.21
381_I507_K1.2770.21
24_L388_V1.2720.21
171_M261_A1.2700.21
289_S433_E1.2690.20
219_L487_R1.2680.20
295_L486_N1.2640.20
43_L339_I1.2570.20
204_I306_Y1.2570.20
123_L376_I1.2530.20
457_V502_I1.2450.20
303_S337_L1.2380.20
43_L326_Y1.2360.20
13_K91_S1.2330.20
102_M188_R1.2290.20
183_I207_L1.2250.20
237_E382_F1.2230.20
31_G125_P1.2220.20
137_D232_V1.2220.20
215_T341_L1.2130.19
202_S295_L1.2130.19
53_S308_E1.2110.19
219_L305_N1.2090.19
58_L349_V1.2060.19
289_S361_I1.2000.19
65_K276_Y1.2000.19
331_N341_L1.1970.19
254_E273_L1.1960.19
257_I380_I1.1960.19
436_M477_I1.1950.19
264_M434_Q1.1940.19
222_G417_K1.1930.19
369_D391_V1.1800.19
59_D189_F1.1760.19
361_I470_D1.1760.19
273_L338_Y1.1700.18
473_Y502_I1.1700.18
75_F102_M1.1680.18
173_S242_D1.1610.18
404_L438_V1.1580.18
99_G103_V1.1570.18
303_S438_V1.1500.18
80_E93_E1.1460.18
33_I68_T1.1420.18
35_I236_L1.1370.18
18_F33_I1.1360.18
310_G332_D1.1320.18
377_L435_T1.1310.18
42_E497_E1.1310.18
276_Y392_Y1.1310.18
253_A273_L1.1280.18
11_L488_K1.1280.18
180_A205_I1.1260.18
313_H319_S1.1250.18
92_R109_Q1.1230.18
307_A505_K1.1230.18
11_L44_E1.1220.18
112_I475_I1.1160.17
10_M112_I1.1160.17
210_Y468_Y1.1130.17
81_N85_G1.1080.17
44_E92_R1.1070.17
466_V473_Y1.1060.17
219_L312_L1.0980.17
10_M225_I1.0980.17
71_I120_Y1.0940.17
237_E467_K1.0930.17
297_P308_E1.0920.17
213_V436_M1.0890.17
38_S457_V1.0830.17
163_F434_Q1.0780.17
42_E79_G1.0760.17
172_L199_R1.0760.17
384_N394_L1.0730.17
120_Y132_F1.0730.17
349_V425_E1.0720.17
193_S208_G1.0720.17
213_V505_K1.0710.17
103_V329_M1.0660.16
38_S85_G1.0660.16
197_I289_S1.0650.16
22_K498_K1.0620.16
95_C362_H1.0590.16
20_V43_L1.0530.16
142_S409_L1.0510.16
409_L429_Y1.0510.16
35_I231_V1.0500.16
183_I205_I1.0500.16
362_H372_T1.0460.16
310_G339_I1.0410.16
305_N319_S1.0400.16
271_Q295_L1.0400.16
29_I33_I1.0390.16
43_L112_I1.0360.16
431_F438_V1.0360.16
293_M305_N1.0360.16
174_V252_R1.0340.16
364_F502_I1.0320.16
213_V338_Y1.0320.16
31_G474_V1.0290.16
158_P415_E1.0290.16
179_I283_I1.0280.16
246_I277_Y1.0260.16
9_L450_E1.0260.16
279_R341_L1.0250.16
48_N79_G1.0240.16
356_S434_Q1.0240.16
414_V436_M1.0200.16
9_L208_G1.0200.16
176_V182_E1.0150.16
13_K46_E1.0150.16
144_H429_Y1.0140.16
377_L384_N1.0140.16
324_T434_Q1.0130.16
103_V176_V1.0110.16
172_L453_I1.0100.16
346_I479_K1.0090.15
252_R426_Y1.0050.15
58_L502_I1.0050.15
272_A355_T1.0030.15
133_E198_E1.0010.15
202_S432_G1.0000.15
249_L357_P0.9990.15
85_G91_S0.9990.15
139_E460_I0.9940.15
75_F86_E0.9920.15
48_N81_N0.9900.15
346_I404_L0.9800.15
305_N490_V0.9780.15
132_F264_M0.9780.15
46_E91_S0.9770.15
137_D271_Q0.9760.15
418_D421_T0.9750.15
473_Y496_L0.9720.15
365_V477_I0.9700.15
118_I183_I0.9700.15
366_N436_M0.9700.15
287_I319_S0.9670.15
261_A271_Q0.9660.15
416_I496_L0.9590.15
134_S280_L0.9580.15
44_E287_I0.9570.15
273_L282_K0.9570.15
37_K490_V0.9570.15
120_Y440_V0.9560.15
161_W434_Q0.9520.15
202_S404_L0.9520.15
245_L419_L0.9520.15
137_D357_P0.9510.15
371_G378_D0.9500.15
51_L394_L0.9480.14
38_S91_S0.9450.14
250_E280_L0.9450.14
79_G91_S0.9440.14
305_N312_L0.9430.14
287_I332_D0.9390.14
326_Y434_Q0.9370.14
11_L257_I0.9360.14
40_L166_L0.9340.14
400_V404_L0.9330.14
179_I357_P0.9330.14
215_T331_N0.9260.14
94_Y325_V0.9250.14
45_K385_S0.9220.14
70_R256_I0.9210.14
147_E222_G0.9200.14
293_M312_L0.9190.14
432_G437_I0.9180.14
66_D231_V0.9170.14
234_K326_Y0.9170.14
132_F343_L0.9170.14
14_S79_G0.9150.14
99_G119_Q0.9100.14
312_L341_L0.9100.14
326_Y377_L0.9040.14
141_M217_P0.9040.14
21_S483_G0.9000.14
144_H409_L0.9000.14
138_D192_G0.8990.14
63_K256_I0.8980.14
287_I346_I0.8970.14
85_G109_Q0.8960.14
343_L355_T0.8940.14
202_S493_L0.8920.14
378_D409_L0.8920.14
175_D207_L0.8910.14
57_A105_A0.8900.14
91_S109_Q0.8890.14
303_S361_I0.8870.14
72_L75_F0.8860.14
105_A215_T0.8860.14
310_G407_A0.8840.13
264_M355_T0.8820.13
192_G259_A0.8820.13
325_V349_V0.8770.13
303_S326_Y0.8720.13
46_E88_N0.8650.13
232_V303_S0.8650.13
40_L493_L0.8650.13
91_S490_V0.8640.13
269_F409_L0.8630.13
207_L210_Y0.8620.13
397_T437_I0.8620.13
140_T436_M0.8590.13
497_E506_I0.8590.13
339_I487_R0.8570.13
397_T433_E0.8560.13
256_I432_G0.8550.13
48_N91_S0.8550.13
190_I208_G0.8510.13
244_R254_E0.8480.13
304_K326_Y0.8470.13
251_E383_I0.8460.13
134_S192_G0.8460.13
364_F377_L0.8450.13
408_D477_I0.8440.13
57_A329_M0.8420.13
261_A471_G0.8420.13
283_I388_V0.8390.13
267_T319_S0.8380.13
332_D367_R0.8370.13
39_L89_E0.8360.13
271_Q435_T0.8350.13
113_C421_T0.8330.13
387_N422_G0.8320.13
375_N435_T0.8300.13
148_D357_P0.8290.13
219_L302_Y0.8290.13
109_Q201_G0.8270.13
312_L319_S0.8240.13
21_S349_V0.8220.13
119_Q184_I0.8190.13
398_V409_L0.8150.12
264_M435_T0.8130.12
61_V501_N0.8130.12
48_N87_A0.8130.12
83_K381_I0.8110.12
150_V276_Y0.8110.12
64_L151_P0.8110.12
253_A376_I0.8070.12
383_I434_Q0.8060.12
259_A382_F0.8060.12
400_V408_D0.8060.12
101_I458_N0.8050.12
118_I256_I0.8040.12
111_K455_K0.8030.12
75_F191_K0.7980.12
272_A503_K0.7970.12
15_A97_E0.7950.12
259_A276_Y0.7950.12
213_V420_V0.7940.12
19_G92_R0.7930.12
105_A276_Y0.7910.12
79_G85_G0.7900.12
453_I463_K0.7890.12
129_S210_Y0.7860.12
149_T152_R0.7860.12
98_K238_D0.7850.12
80_E243_E0.7840.12
225_I264_M0.7840.12
88_N91_S0.7790.12
361_I457_V0.7780.12
315_I390_K0.7780.12
287_I367_R0.7760.12
11_L61_V0.7760.12
97_E227_I0.7760.12
53_S326_Y0.7730.12
346_I420_V0.7730.12
142_S378_D0.7720.12
378_D429_Y0.7720.12
85_G490_V0.7710.12
32_N74_N0.7700.12
380_I425_E0.7700.12
154_K379_T0.7650.12
135_F310_G0.7620.12
20_V52_V0.7620.12
71_I198_E0.7610.12
295_L306_Y0.7600.12
223_W496_L0.7590.12
452_K488_K0.7590.12
42_E46_E0.7590.12
488_K499_K0.7580.12
204_I431_F0.7580.12
373_I414_V0.7570.12
132_F440_V0.7540.12
84_K258_I0.7530.12
267_T346_I0.7530.12
144_H154_K0.7520.12
227_I485_Y0.7520.12
192_G208_G0.7520.12
54_A91_S0.7490.12
390_K439_P0.7470.12
46_E490_V0.7470.12
456_I460_I0.7450.11
252_R474_V0.7440.11
272_A358_I0.7420.11
153_A258_I0.7420.11
83_K193_S0.7400.11
94_Y223_W0.7390.11
295_L305_N0.7380.11
451_F502_I0.7360.11
37_K332_D0.7350.11
313_H341_L0.7350.11
257_I349_V0.7340.11
343_L431_F0.7330.11
48_N309_I0.7330.11
359_D373_I0.7320.11
21_S35_I0.7320.11
235_R388_V0.7320.11
42_E109_Q0.7270.11
187_V228_T0.7270.11
362_H369_D0.7250.11
207_L494_K0.7240.11
114_D162_K0.7240.11
267_T493_L0.7230.11
46_E487_R0.7200.11
35_I462_P0.7190.11
142_S324_T0.7190.11
324_T429_Y0.7190.11
61_V105_A0.7170.11
309_I331_N0.7150.11
189_F435_T0.7150.11
396_I438_V0.7130.11
54_A57_A0.7130.11
293_M435_T0.7120.11
338_Y341_L0.7110.11
370_I373_I0.7110.11
201_G302_Y0.7110.11
313_H331_N0.7100.11
311_E319_S0.7090.11
82_S113_C0.7090.11
55_E122_F0.7080.11
279_R405_K0.7070.11
19_G205_I0.7070.11
31_G78_V0.7050.11
99_G471_G0.7030.11
264_M356_S0.7000.11
142_S398_V0.6990.11
398_V429_Y0.6990.11
261_A394_L0.6980.11
251_E323_Y0.6970.11
309_I367_R0.6970.11
19_G109_Q0.6960.11
210_Y438_V0.6950.11
381_I393_T0.6950.11
87_A91_S0.6930.11
405_K453_I0.6920.11
277_Y396_I0.6910.11
161_W311_E0.6910.11
85_G400_V0.6900.11
217_P272_A0.6880.11
292_D371_G0.6880.11
220_S388_V0.6880.11
124_Q166_L0.6880.11
305_N337_L0.6870.11
44_E367_R0.6870.11
341_L438_V0.6860.11
295_L339_I0.6860.11
389_S423_N0.6850.11
90_L311_E0.6850.11
17_L376_I0.6830.11
64_L352_V0.6830.11
110_K150_V0.6810.11
398_V433_E0.6800.11
95_C100_C0.6790.11
111_K227_I0.6780.11
67_I276_Y0.6760.11
123_L414_V0.6750.11
150_V170_P0.6730.11
21_S34_L0.6730.11
17_L329_M0.6710.11
119_Q174_V0.6710.11
54_A95_C0.6710.11
138_D232_V0.6700.11
202_S433_E0.6700.11
257_I264_M0.6700.11
378_D408_D0.6700.11
179_I393_T0.6670.10
34_L78_V0.6660.10
13_K487_R0.6630.10
210_Y396_I0.6620.10
314_D324_T0.6620.10
396_I404_L0.6620.10
54_A370_I0.6610.10
175_D281_G0.6600.10
48_N82_S0.6590.10
221_D474_V0.6590.10
41_A434_Q0.6560.10
182_E185_N0.6550.10
164_V448_N0.6530.10
329_M341_L0.6530.10
131_S134_S0.6520.10
77_I105_A0.6510.10
91_S487_R0.6510.10
245_L383_I0.6510.10
135_F339_I0.6500.10
164_V170_P0.6500.10
67_I114_D0.6490.10
323_Y431_F0.6490.10
39_L90_L0.6460.10
44_E309_I0.6440.10
42_E91_S0.6440.10
144_H371_G0.6430.10
99_G215_T0.6420.10
48_N228_T0.6400.10
38_S81_N0.6400.10
365_V506_I0.6380.10
477_I506_I0.6380.10
310_G325_V0.6370.10
219_L337_L0.6370.10
48_N85_G0.6350.10
38_S109_Q0.6340.10
231_V494_K0.6340.10
277_Y462_P0.6330.10
146_K220_S0.6330.10
152_R179_I0.6330.10
48_N375_N0.6320.10
331_N337_L0.6320.10
10_M14_S0.6310.10
324_T355_T0.6290.10
13_K490_V0.6280.10
100_C228_T0.6270.10
122_F179_I0.6270.10
311_E337_L0.6260.10
41_A361_I0.6250.10
293_M493_L0.6240.10
116_M312_L0.6240.10
267_T337_L0.6230.10
143_L410_A0.6230.10
53_S186_G0.6230.10
90_L188_R0.6230.10
307_A319_S0.6230.10
68_T466_V0.6220.10
61_V103_V0.6220.10
10_M473_Y0.6220.10
250_E376_I0.6210.10
219_L287_I0.6200.10
220_S283_I0.6200.10
191_K243_E0.6190.10
261_A434_Q0.6190.10
398_V426_Y0.6190.10
16_L123_L0.6180.10
62_K455_K0.6180.10
441_N453_I0.6180.10
159_G409_L0.6170.10
103_V193_S0.6160.10
161_W319_S0.6160.10
13_K95_C0.6150.10
416_I425_E0.6140.10
237_E259_A0.6140.10
276_Y407_A0.6130.10
271_Q304_K0.6120.10
58_L112_I0.6110.10
246_I435_T0.6110.10
244_R253_A0.6110.10
202_S293_M0.6100.10
169_K444_I0.6100.10
203_L223_W0.6100.10
195_I423_N0.6100.10
245_L415_E0.6100.10
316_L439_P0.6090.10
434_Q482_I0.6090.10
457_V475_I0.6080.10
63_K488_K0.6070.10
21_S504_I0.6060.10
26_K503_K0.6060.10
304_K406_E0.6050.10
305_N493_L0.6030.10
171_M210_Y0.6030.10
435_T442_R0.6010.10
161_W256_I0.6010.10
215_T220_S0.5990.10
450_E454_S0.5990.10
195_I447_N0.5990.10
175_D451_F0.5990.10
101_I467_K0.5980.10
358_I383_I0.5980.10
277_Y375_N0.5960.10
193_S498_K0.5960.10
59_D233_R0.5950.10
393_T456_I0.5940.10
167_S444_I0.5940.10
180_A492_R0.5860.10
33_I194_F0.5860.10
33_I168_N0.5850.10
219_L311_E0.5850.10
368_V381_I0.5850.10
64_L452_K0.5850.10
366_N408_D0.5820.09
185_N416_I0.5820.09
40_L121_S0.5800.09
209_N503_K0.5800.09
293_M356_S0.5800.09
47_S416_I0.5800.09
11_L14_S0.5780.09
337_L505_K0.5780.09
244_R256_I0.5770.09
434_Q497_E0.5760.09
443_G467_K0.5760.09
436_M439_P0.5750.09
273_L277_Y0.5730.09
282_K415_E0.5730.09
205_I475_I0.5700.09
415_E462_P0.5690.09
198_E278_M0.5690.09
37_K310_G0.5680.09
144_H378_D0.5680.09
167_S171_M0.5680.09
271_Q358_I0.5670.09
490_V493_L0.5640.09
9_L252_R0.5630.09
296_P407_A0.5630.09
10_M185_N0.5630.09
264_M271_Q0.5610.09
17_L299_I0.5610.09
219_L295_L0.5610.09
355_T376_I0.5590.09
222_G296_P0.5580.09
305_N313_H0.5570.09
52_V220_S0.5560.09
219_L293_M0.5550.09
303_S313_H0.5530.09
315_I432_G0.5530.09
86_E244_R0.5530.09
358_I409_L0.5520.09
356_S414_V0.5510.09
68_T174_V0.5490.09
227_I309_I0.5480.09
15_A163_F0.5470.09
168_N172_L0.5460.09
275_E355_T0.5450.09
453_I458_N0.5450.09
277_Y464_A0.5420.09
142_S159_G0.5410.09
159_G429_Y0.5410.09
107_E361_I0.5400.09
79_G109_Q0.5400.09
63_K453_I0.5370.09
310_G486_N0.5370.09
76_E336_K0.5350.09
194_F302_Y0.5330.09
293_M337_L0.5330.09
162_K507_K0.5310.09
370_I398_V0.5310.09
63_K333_E0.5300.09
171_M175_D0.5300.09
46_E229_R0.5300.09
359_D379_T0.5290.09
220_S300_T0.5280.09
42_E82_S0.5280.09
410_A454_S0.5280.09
76_E133_E0.5260.09
304_K337_L0.5250.09
250_E444_I0.5250.09
324_T408_D0.5240.09
343_L364_F0.5230.09
261_A304_K0.5230.09
150_V164_V0.5220.09
105_A393_T0.5220.09
67_I160_N0.5220.09
289_S337_L0.5210.09
132_F208_G0.5200.09
394_L456_I0.5190.09
40_L331_N0.5190.09
147_E415_E0.5190.09
366_N373_I0.5180.09
16_L103_V0.5170.09
279_R441_N0.5170.09
182_E258_I0.5160.09
219_L309_I0.5160.09
161_W287_I0.5160.09
333_E355_T0.5150.09
22_K475_I0.5150.09
329_M336_K0.5150.09
123_L443_G0.5130.09
293_M346_I0.5110.09
169_K279_R0.5110.09
131_S175_D0.5100.09
296_P454_S0.5100.09
10_M176_V0.5100.09
137_D249_L0.5080.09
201_G434_Q0.5080.09
139_E155_K0.5050.09
41_A48_N0.5030.09
493_L506_I0.5030.09
53_S75_F0.5020.09
149_T326_Y0.5020.09
346_I408_D0.5010.09
13_K42_E0.5000.09
33_I124_Q0.5000.09
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
3i8oA 2 0.251 99.8 0.916 Contact Map
4bwyA 3 0.4667 99.8 0.919 Contact Map
4blqA 3 0.4608 99.8 0.923 Contact Map
3jvvA 3 0.6118 99.8 0.923 Contact Map
2oap1 3 0.8529 99.7 0.925 Contact Map
2ewvA 3 0.6118 99.7 0.925 Contact Map
4cr2I 1 0.5745 99.7 0.928 Contact Map
4ihqA 3 0.849 99.7 0.928 Contact Map
3ix7A 2 0.2451 99.6 0.932 Contact Map
2gzaA 3 0.5627 99.6 0.932 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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