Q7LXR2 - SULSO - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

Q7LXR2 - Phosphoribosylamine--glycine ligase (GAR synthetase) (GARS) (PurD)

UniProt:	Q7LXR2	Sequences: MVRKMKVLLVGDGARENVLAYSLARSSKGYKIYALSSYINPGINSIVKTTGAEYFIGNVNSPEVIKEVIKKVNPDLGVIGPEDPLFNGIADIFRKEGISVFGASKKCARIEESKAWARELMWKHSIPGRLRYKVFYTIEDTAKFILEYGGSVAIKPAGQAGGKGVKVIADLEAYLTHDKREALTKSVNEIGSLYNKEGEPRIIIEEKVDGPEYTLHVLSDGKTTISLPLAQDYKNAYQDGIGPETGGMGSISGPNELLPFISNEEYQTTYDIVKRTMDAIYKETGERYVGVIAGQMMLTELWGPTVIEYYSRFGDPEASAIIPRLESDFGETIELTATGHLNKASIKINEKPSIVRAVATLGYPISKQMASGHKIVVDLEKMKERGCVVFFGSVALEGMQLITKGSRALEIVAIGDFEEAAENLDRCMQYISSDTKLIYRTDIGRTVKSQIEKAEIIRYSYKNREKRGILGVSADWSPNGGLW	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	483 (401)
Sequences:	17774 (9341)
Seq/√Len:	466.5

ECOLI - PUR2 ACCC PURT PURK
BACSU - PUR2 ACCC1 ACCC2 BACD PURT PURK PYC
HALSA - Q9HQ67 Q9HPP8 Q9HRM3
SULSO - Q7LXR2 Q97VY6 PURT PURK

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
146_L	171_L	4.156	1.00
6_K	31_K	3.467	1.00
137_T	140_D	3.328	1.00
67_E	71_K	3.301	1.00
142_A	180_R	3.292	1.00
170_D	173_A	3.288	1.00
91_D	109_R	2.991	1.00
274_K	278_D	2.942	1.00
271_D	275_R	2.814	1.00
91_D	95_K	2.807	1.00
61_S	64_V	2.797	1.00
150_G	171_L	2.567	1.00
335_L	340_H	2.550	1.00
299_T	303_G	2.478	1.00
86_F	112_E	2.457	1.00
123_K	279_A	2.444	1.00
22_S	25_R	2.442	1.00
70_K	96_E	2.418	1.00
40_N	57_G	2.414	1.00
5_M	75_D	2.356	1.00
169_A	173_A	2.294	1.00
121_M	276_T	2.276	1.00
131_R	206_E	2.269	1.00
263_N	267_Q	2.260	1.00
267_Q	271_D	2.195	1.00
252_S	324_R	2.171	1.00
415_G	419_E	2.162	1.00
92_I	96_E	2.156	1.00
9_L	20_A	2.139	1.00
144_F	147_E	2.130	1.00
221_G	289_V	2.089	1.00
169_A	209_D	2.077	1.00
272_I	304_P	2.036	1.00
62_P	92_I	2.013	1.00
133_K	147_E	2.001	1.00
326_E	347_K	1.983	1.00
374_K	400_Q	1.977	1.00
7_V	101_F	1.948	1.00
116_W	119_E	1.942	1.00
262_S	265_E	1.938	1.00
331_E	335_L	1.934	1.00
66_K	96_E	1.934	1.00
119_E	123_K	1.915	1.00
356_R	424_L	1.906	1.00
196_K	201_R	1.875	1.00
167_V	207_K	1.870	1.00
332_T	342_N	1.853	1.00
268_T	303_G	1.840	1.00
180_R	184_T	1.819	1.00
416_D	419_E	1.819	1.00
267_Q	270_Y	1.800	1.00
209_D	300_E	1.762	1.00
326_E	349_N	1.753	1.00
171_L	180_R	1.750	1.00
143_K	147_E	1.748	1.00
138_I	184_T	1.743	1.00
63_E	92_I	1.736	1.00
120_L	279_A	1.721	1.00
136_Y	140_D	1.694	1.00
142_A	171_L	1.670	1.00
8_L	35_L	1.655	1.00
358_V	437_L	1.648	1.00
268_T	271_D	1.637	1.00
138_I	180_R	1.628	1.00
66_K	70_K	1.627	1.00
362_G	438_I	1.615	1.00
144_F	148_Y	1.613	1.00
275_R	278_D	1.610	1.00
104_S	107_C	1.606	1.00
77_G	98_I	1.602	1.00
64_V	67_E	1.592	1.00
119_E	122_W	1.590	1.00
218_L	332_T	1.577	1.00
34_A	47_V	1.562	1.00
109_R	116_W	1.558	1.00
6_K	54_Y	1.554	1.00
124_H	279_A	1.553	1.00
25_R	331_E	1.552	1.00
138_I	142_A	1.548	1.00
94_R	105_K	1.546	1.00
93_F	98_I	1.535	1.00
218_L	336_T	1.530	1.00
23_L	32_I	1.529	1.00
265_E	298_L	1.522	1.00
138_I	183_L	1.510	1.00
270_Y	274_K	1.495	1.00
31_K	54_Y	1.487	1.00
92_I	95_K	1.478	1.00
17_N	50_T	1.477	1.00
68_V	72_V	1.458	1.00
323_P	414_I	1.457	1.00
265_E	268_T	1.455	1.00
56_I	68_V	1.450	1.00
69_I	98_I	1.450	1.00
94_R	104_S	1.448	1.00
368_Q	373_H	1.443	1.00
208_V	307_I	1.442	1.00
99_S	338_T	1.430	1.00
218_L	291_V	1.428	1.00
181_E	185_K	1.428	1.00
22_S	331_E	1.426	1.00
215_L	269_T	1.414	1.00
120_L	124_H	1.412	1.00
62_P	66_K	1.410	1.00
323_P	412_V	1.410	1.00
7_V	23_L	1.403	1.00
391_F	394_V	1.402	1.00
143_K	146_L	1.396	1.00
431_I	441_T	1.393	1.00
110_I	120_L	1.393	1.00
142_A	146_L	1.391	1.00
359_A	406_S	1.388	1.00
115_A	119_E	1.381	1.00
157_A	201_R	1.372	1.00
43_I	49_T	1.365	1.00
206_E	305_T	1.363	1.00
139_E	143_K	1.354	1.00
219_S	225_I	1.354	1.00
355_V	410_E	1.352	1.00
67_E	70_K	1.350	1.00
111_E	309_Y	1.346	1.00
217_V	273_V	1.342	1.00
69_I	77_G	1.339	1.00
374_K	399_M	1.335	1.00
426_R	430_Y	1.332	1.00
26_S	328_D	1.327	1.00
21_Y	25_R	1.325	1.00
313_F	329_F	1.324	1.00
219_S	277_M	1.312	1.00
375_I	394_V	1.299	1.00
91_D	106_K	1.282	1.00
56_I	72_V	1.279	1.00
110_I	116_W	1.271	1.00
374_K	377_V	1.267	1.00
77_G	93_F	1.258	1.00
145_I	150_G	1.256	1.00
135_F	144_F	1.255	1.00
6_K	33_Y	1.241	1.00
117_A	121_M	1.238	1.00
93_F	100_V	1.238	1.00
152_V	204_I	1.232	1.00
140_D	143_K	1.231	1.00
222_K	281_Y	1.231	1.00
345_S	348_I	1.230	1.00
217_V	277_M	1.228	1.00
340_H	343_K	1.227	1.00
106_K	110_I	1.221	1.00
118_R	128_G	1.217	1.00
354_I	421_A	1.216	1.00
133_K	144_F	1.208	1.00
104_S	289_V	1.204	1.00
351_K	416_D	1.201	1.00
425_D	429_Q	1.192	1.00
120_L	123_K	1.185	1.00
115_A	134_V	1.179	1.00
351_K	414_I	1.178	1.00
341_L	344_A	1.178	1.00
418_E	422_E	1.175	1.00
387_C	413_A	1.171	1.00
263_N	266_Y	1.162	1.00
21_Y	390_F	1.162	1.00
139_E	142_A	1.162	1.00
181_E	184_T	1.149	1.00
261_I	265_E	1.144	1.00
421_A	425_D	1.142	1.00
145_I	152_V	1.142	1.00
300_E	303_G	1.138	1.00
150_G	170_D	1.136	1.00
354_I	420_A	1.131	1.00
210_G	300_E	1.126	1.00
166_K	186_S	1.120	1.00
134_V	201_R	1.113	1.00
262_S	302_W	1.110	1.00
122_W	131_R	1.108	1.00
395_A	398_G	1.106	1.00
7_V	30_Y	1.104	1.00
83_D	87_N	1.098	1.00
415_G	423_N	1.096	1.00
154_I	202_I	1.095	1.00
94_R	289_V	1.091	1.00
413_A	424_L	1.084	1.00
35_L	65_I	1.084	1.00
217_V	294_G	1.080	1.00
49_T	395_A	1.080	1.00
411_I	431_I	1.079	1.00
138_I	187_V	1.076	1.00
90_A	100_V	1.071	1.00
7_V	334_E	1.068	1.00
357_A	360_T	1.062	1.00
122_W	133_K	1.061	1.00
327_S	332_T	1.061	1.00
411_I	427_C	1.052	1.00
253_G	258_L	1.039	1.00
89_I	93_F	1.038	1.00
381_K	431_I	1.038	1.00
91_D	105_K	1.038	1.00
146_L	180_R	1.034	1.00
419_E	423_N	1.034	1.00
122_W	128_G	1.033	1.00
99_S	221_G	1.032	1.00
334_E	338_T	1.025	1.00
172_E	181_E	1.025	1.00
347_K	350_E	1.025	1.00
31_K	48_K	1.021	1.00
365_I	368_Q	1.019	1.00
226_S	343_K	1.013	1.00
69_I	93_F	1.013	1.00
19_L	78_V	1.012	1.00
131_R	148_Y	1.011	1.00
232_D	258_L	1.004	1.00
65_I	93_F	1.003	1.00
215_L	270_Y	1.000	1.00
127_P	272_I	0.999	1.00
264_E	268_T	0.997	1.00
121_M	306_V	0.996	1.00
136_Y	201_R	0.995	1.00
33_Y	72_V	0.989	1.00
20_A	32_I	0.989	1.00
273_V	294_G	0.986	1.00
153_A	167_V	0.986	1.00
264_E	267_Q	0.986	1.00
8_L	69_I	0.983	1.00
183_L	187_V	0.980	1.00
358_V	428_M	0.979	1.00
209_D	299_T	0.978	1.00
66_K	92_I	0.965	1.00
426_R	429_Q	0.960	1.00
213_Y	298_L	0.959	1.00
387_C	427_C	0.958	1.00
30_Y	338_T	0.955	1.00
332_T	335_L	0.953	1.00
141_T	174_Y	0.953	1.00
6_K	75_D	0.953	1.00
354_I	444_G	0.950	1.00
423_N	426_R	0.948	1.00
140_D	144_F	0.944	1.00
23_L	334_E	0.943	1.00
68_V	74_P	0.936	1.00
106_K	109_R	0.933	1.00
23_L	78_V	0.928	1.00
118_R	205_E	0.926	1.00
113_S	157_A	0.922	1.00
272_I	275_R	0.921	1.00
9_L	23_L	0.915	1.00
158_G	196_K	0.915	1.00
78_V	333_I	0.914	1.00
225_I	274_K	0.909	1.00
422_E	426_R	0.909	1.00
344_A	347_K	0.908	1.00
173_A	181_E	0.907	1.00
101_F	334_E	0.905	1.00
358_V	441_T	0.904	1.00
393_S	396_L	0.902	1.00
148_Y	152_V	0.901	1.00
260_F	298_L	0.898	1.00
386_G	389_V	0.898	1.00
361_L	436_K	0.897	1.00
24_A	32_I	0.896	1.00
276_T	309_Y	0.895	1.00
397_E	400_Q	0.888	1.00
378_D	432_S	0.884	1.00
249_G	356_R	0.883	1.00
352_P	355_V	0.881	1.00
7_V	29_G	0.881	1.00
183_L	202_I	0.881	1.00
375_I	378_D	0.875	1.00
294_G	309_Y	0.875	1.00
428_M	437_L	0.875	1.00
145_I	183_L	0.871	1.00
377_V	434_D	0.869	1.00
230_A	266_Y	0.868	1.00
298_L	304_P	0.864	1.00
150_G	174_Y	0.863	1.00
42_G	45_S	0.863	1.00
115_A	157_A	0.862	1.00
48_K	55_F	0.857	1.00
93_F	96_E	0.856	1.00
88_G	92_I	0.854	1.00
427_C	430_Y	0.851	1.00
223_T	342_N	0.850	1.00
343_K	348_I	0.844	1.00
10_V	89_I	0.844	1.00
377_V	432_S	0.836	1.00
224_T	278_D	0.836	1.00
20_A	50_T	0.835	1.00
36_S	55_F	0.831	1.00
168_I	182_A	0.831	1.00
22_S	26_S	0.830	1.00
63_E	67_E	0.829	1.00
271_D	274_K	0.826	1.00
153_A	207_K	0.824	1.00
386_G	423_N	0.819	1.00
227_L	270_Y	0.818	1.00
6_K	72_V	0.815	1.00
83_D	86_F	0.813	1.00
66_K	98_I	0.812	1.00
378_D	396_L	0.809	1.00
250_S	320_A	0.806	1.00
24_A	53_E	0.806	1.00
172_E	180_R	0.803	1.00
228_P	252_S	0.803	1.00
88_G	91_D	0.803	1.00
166_K	182_A	0.803	1.00
6_K	73_N	0.800	1.00
166_K	185_K	0.799	1.00
94_R	106_K	0.798	1.00
215_L	273_V	0.798	1.00
26_S	331_E	0.797	1.00
378_D	434_D	0.795	1.00
272_I	296_M	0.794	1.00
224_T	277_M	0.793	1.00
258_L	261_I	0.793	1.00
119_E	132_Y	0.792	1.00
62_P	89_I	0.792	1.00
206_E	303_G	0.791	1.00
26_S	335_L	0.790	1.00
231_Q	251_I	0.783	1.00
268_T	272_I	0.782	1.00
33_Y	68_V	0.780	1.00
429_Q	441_T	0.780	1.00
6_K	30_Y	0.780	1.00
353_S	356_R	0.777	1.00
413_A	427_C	0.777	1.00
381_K	430_Y	0.774	1.00
88_G	109_R	0.772	1.00
111_E	280_I	0.771	1.00
91_D	94_R	0.771	1.00
229_L	324_R	0.770	1.00
222_K	339_G	0.768	1.00
138_I	174_Y	0.767	1.00
229_L	232_D	0.765	1.00
428_M	439_Y	0.764	1.00
115_A	201_R	0.762	1.00
46_I	49_T	0.760	1.00
29_G	32_I	0.760	1.00
345_S	349_N	0.757	1.00
380_E	432_S	0.756	1.00
107_C	281_Y	0.755	1.00
17_N	20_A	0.754	1.00
360_T	373_H	0.751	1.00
380_E	396_L	0.751	1.00
135_F	141_T	0.751	1.00
218_L	227_L	0.750	1.00
346_I	349_N	0.749	1.00
378_D	381_K	0.747	1.00
141_T	183_L	0.747	1.00
145_I	174_Y	0.743	1.00
44_N	49_T	0.743	1.00
288_Y	311_S	0.742	1.00
90_A	94_R	0.741	1.00
33_Y	74_P	0.740	1.00
46_I	50_T	0.740	1.00
154_I	183_L	0.738	1.00
268_T	304_P	0.738	1.00
20_A	34_A	0.738	1.00
107_C	289_V	0.738	1.00
352_P	417_F	0.734	1.00
26_S	334_E	0.733	1.00
219_S	278_D	0.733	1.00
333_I	337_A	0.730	1.00
219_S	224_T	0.729	1.00
36_S	43_I	0.727	1.00
208_V	299_T	0.727	1.00
273_V	296_M	0.726	1.00
345_S	350_E	0.724	1.00
152_V	168_I	0.724	1.00
94_R	100_V	0.723	1.00
142_A	184_T	0.721	1.00
208_V	305_T	0.721	1.00
104_S	281_Y	0.719	1.00
248_M	440_R	0.719	1.00
213_Y	258_L	0.718	1.00
289_V	336_T	0.717	1.00
228_P	325_L	0.715	1.00
115_A	203_I	0.715	1.00
145_I	204_I	0.713	1.00
17_N	47_V	0.711	1.00
261_I	266_Y	0.711	1.00
252_S	320_A	0.709	1.00
211_P	298_L	0.708	1.00
266_Y	270_Y	0.706	1.00
419_E	422_E	0.706	1.00
141_T	204_I	0.705	1.00
31_K	53_E	0.705	1.00
47_V	50_T	0.705	1.00
429_Q	439_Y	0.704	1.00
44_N	48_K	0.704	1.00
227_L	274_K	0.702	1.00
378_D	382_M	0.700	1.00
228_P	324_R	0.700	1.00
217_V	292_I	0.697	1.00
122_W	132_Y	0.695	1.00
154_I	182_A	0.695	1.00
191_G	198_G	0.695	1.00
41_P	401_L	0.692	1.00
187_V	202_I	0.689	1.00
222_K	278_D	0.687	1.00
319_S	322_I	0.687	1.00
153_A	165_V	0.687	1.00
125_S	275_R	0.686	1.00
145_I	149_G	0.683	1.00
390_F	393_S	0.682	1.00
126_I	306_V	0.681	1.00
211_P	260_F	0.677	1.00
48_K	51_G	0.676	1.00
367_K	443_I	0.674	1.00
371_S	438_I	0.674	1.00
418_E	421_A	0.674	1.00
269_T	304_P	0.673	1.00
277_M	292_I	0.672	1.00
219_S	289_V	0.672	1.00
145_I	148_Y	0.671	1.00
148_Y	206_E	0.671	1.00
395_A	402_I	0.667	1.00
131_R	147_E	0.665	1.00
45_S	48_K	0.665	1.00
168_I	174_Y	0.664	1.00
144_F	204_I	0.660	1.00
113_S	201_R	0.660	1.00
152_V	206_E	0.658	1.00
34_A	43_I	0.658	1.00
133_K	140_D	0.656	1.00
415_G	420_A	0.656	1.00
146_L	150_G	0.653	1.00
343_K	347_K	0.652	1.00
154_I	204_I	0.652	1.00
276_T	279_A	0.650	1.00
346_I	350_E	0.650	1.00
57_G	64_V	0.647	1.00
373_H	434_D	0.647	1.00
154_I	174_Y	0.646	1.00
58_N	61_S	0.646	1.00
138_I	141_T	0.645	1.00
213_Y	261_I	0.644	1.00
275_R	279_A	0.643	1.00
383_K	387_C	0.641	1.00
29_G	330_G	0.640	1.00
355_V	360_T	0.640	1.00
154_I	168_I	0.640	1.00
409_L	431_I	0.640	1.00
273_V	277_M	0.638	1.00
251_I	417_F	0.637	1.00
185_K	191_G	0.635	1.00
127_P	303_G	0.634	1.00
99_S	289_V	0.632	0.99
358_V	431_I	0.631	0.99
355_V	359_A	0.630	0.99
34_A	51_G	0.629	0.99
248_M	359_A	0.625	0.99
42_G	48_K	0.624	0.99
7_V	330_G	0.624	0.99
216_H	291_V	0.624	0.99
226_S	348_I	0.624	0.99
371_S	404_K	0.623	0.99
165_V	245_T	0.622	0.99
8_L	74_P	0.621	0.99
351_K	354_I	0.620	0.99
23_L	30_Y	0.619	0.99
332_T	346_I	0.619	0.99
320_A	323_P	0.619	0.99
440_R	444_G	0.618	0.99
433_S	437_L	0.618	0.99
227_L	232_D	0.616	0.99
382_M	386_G	0.615	0.99
99_S	334_E	0.612	0.99
67_E	96_E	0.611	0.99
433_S	439_Y	0.611	0.99
319_S	355_V	0.611	0.99
428_M	441_T	0.611	0.99
379_L	431_I	0.610	0.99
393_S	398_G	0.608	0.99
5_M	30_Y	0.607	0.99
60_N	87_N	0.604	0.99
7_V	32_I	0.604	0.99
334_E	337_A	0.604	0.99
10_V	65_I	0.604	0.99
182_A	186_S	0.604	0.99
424_L	428_M	0.603	0.99
32_I	36_S	0.603	0.99
265_E	302_W	0.602	0.99
332_T	343_K	0.602	0.99
353_S	414_I	0.600	0.99
392_G	395_A	0.597	0.99
23_L	26_S	0.596	0.99
110_I	311_S	0.596	0.99
355_V	358_V	0.596	0.99
17_N	46_I	0.595	0.99
101_F	337_A	0.595	0.99
187_V	191_G	0.595	0.99
194_Y	198_G	0.595	0.99
113_S	116_W	0.595	0.99
299_T	302_W	0.595	0.99
247_G	250_S	0.593	0.99
105_K	109_R	0.593	0.99
62_P	87_N	0.590	0.99
373_H	436_K	0.589	0.99
308_E	312_R	0.589	0.99
399_M	402_I	0.587	0.99
110_I	123_K	0.585	0.99
258_L	262_S	0.585	0.99
230_A	233_Y	0.585	0.99
23_L	330_G	0.584	0.99
149_G	171_L	0.583	0.99
302_W	305_T	0.582	0.99
151_S	207_K	0.582	0.99
262_S	298_L	0.581	0.99
186_S	202_I	0.581	0.99
62_P	88_G	0.580	0.99
344_A	348_I	0.580	0.99
229_L	348_I	0.579	0.99
40_N	43_I	0.579	0.99
9_L	34_A	0.577	0.99
32_I	37_S	0.575	0.99
184_T	191_G	0.575	0.99
413_A	420_A	0.573	0.99
403_T	433_S	0.572	0.99
278_D	281_Y	0.572	0.99
174_Y	183_L	0.571	0.99
132_Y	203_I	0.570	0.99
34_A	37_S	0.570	0.99
108_A	311_S	0.570	0.99
242_G	247_G	0.568	0.99
220_D	224_T	0.565	0.99
70_K	98_I	0.565	0.99
417_F	421_A	0.564	0.99
299_T	305_T	0.563	0.99
69_I	74_P	0.563	0.99
216_H	230_A	0.563	0.99
352_P	356_R	0.563	0.99
382_M	427_C	0.562	0.99
329_F	333_I	0.562	0.99
362_G	365_I	0.561	0.99
264_E	302_W	0.561	0.99
174_Y	180_R	0.558	0.99
57_G	68_V	0.558	0.99
116_W	120_L	0.557	0.99
297_M	307_I	0.556	0.99
322_I	412_V	0.555	0.99
379_L	382_M	0.555	0.99
54_Y	72_V	0.553	0.99
20_A	24_A	0.553	0.99
20_A	51_G	0.552	0.99
434_D	437_L	0.552	0.99
318_A	322_I	0.549	0.99
77_G	100_V	0.548	0.99
374_K	378_D	0.548	0.99
385_R	389_V	0.546	0.99
381_K	384_E	0.546	0.99
68_V	71_K	0.545	0.99
132_Y	144_F	0.545	0.99
14_A	18_V	0.545	0.99
396_L	399_M	0.544	0.98
375_I	379_L	0.543	0.98
265_E	304_P	0.542	0.98
343_K	346_I	0.542	0.98
135_F	140_D	0.541	0.98
121_M	126_I	0.539	0.98
14_A	410_E	0.539	0.98
362_G	366_S	0.538	0.98
380_E	383_K	0.537	0.98
79_I	100_V	0.537	0.98
46_I	395_A	0.536	0.98
126_I	272_I	0.535	0.98
65_I	77_G	0.534	0.98
15_R	313_F	0.532	0.98
37_S	58_N	0.532	0.98
42_G	47_V	0.531	0.98
398_G	401_L	0.530	0.98
268_T	275_R	0.530	0.98
229_L	266_Y	0.528	0.98
40_N	44_N	0.526	0.98
332_T	336_T	0.525	0.98
421_A	444_G	0.525	0.98
66_K	77_G	0.525	0.98
117_A	306_V	0.525	0.98
118_R	122_W	0.523	0.98
429_Q	432_S	0.523	0.98
75_D	99_S	0.522	0.98
150_G	167_V	0.521	0.98
227_L	348_I	0.518	0.98
139_E	180_R	0.517	0.98
319_S	412_V	0.516	0.98
387_C	423_N	0.516	0.98
387_C	390_F	0.515	0.98
130_L	305_T	0.514	0.98
361_L	368_Q	0.514	0.98
119_E	134_V	0.513	0.98
30_Y	75_D	0.513	0.98
76_L	337_A	0.511	0.98
42_G	46_I	0.511	0.98
225_I	278_D	0.511	0.98
33_Y	50_T	0.510	0.98
216_H	321_I	0.510	0.98
19_L	22_S	0.508	0.98
80_G	84_P	0.506	0.98
222_K	289_V	0.506	0.98
277_M	281_Y	0.506	0.98
135_F	204_I	0.503	0.98
109_R	113_S	0.502	0.97
356_R	359_A	0.502	0.97
35_L	57_G	0.500	0.97
118_R	130_L	0.500	0.97

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2qk4A	1	0.8675	100	0.381	Contact Map
3mjfA	1	0.8758	100	0.382	Contact Map
3lp8A	1	0.8592	100	0.383	Contact Map
2yw2A	2	0.8675	100	0.389	Contact Map
2yrxA	1	0.8551	100	0.389	Contact Map
2ip4A	1	0.8489	100	0.393	Contact Map
4qshA	4	0.8033	100	0.393	Contact Map
3n6rA	1	0.7785	100	0.395	Contact Map
3u9tA	3	0.8903	100	0.398	Contact Map
2qf7A	4	0.8282	100	0.398	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0124 seconds.