Q7LXI7 - SULSO - GREMLIN Contacts

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Q7LXI7 - Amino acid specific permease

UniProt:	Q7LXI7	Sequences: MDEKRELKREVLGTWLVASYGIAANAPIAVATLYFVGIAGLAGGSMPLVTVLSYLIYATTLLVVYEWSKDIAASYGYLAMIKKGLNSSLAAFTVGYGYIYQYLVAGAAGFGVLGVTSFLYLVSPSIASSMPWLWAVISVIVTLETTLIMWLGVKPGGMLNLIVGLISIVYLIITSIALIIIAGDKNTLAPFTAQPVNGNWVLILTSMIFGITTFGGATTPVGVAEEAKVPKKTLPKALLLEFLLLGVGLILNAYAQTVVYGVNNMFNYANLPDPMVIIYSKYFSTITVLILIVLVAFMFNSSTIAFATSGSRMIYGMARDGVLYPKIFTKINKYGVPGNAILLTGIITGALSLISGYILGPLEASIFLITFGSFYVSLGHLFAAIALIRHKVKVRMINIVKHVLVPIVSSIAYILTIYFGTYPAPAFPLNIAVYAAWAVLLIHVILYYILKSRNPEAIKKLGDFSL	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	466 (417)
Sequences:	24735 (16020)
Seq/√Len:	784.5

ECOLI - POTE PROY YIFK ADIC LYSP ANSP PLAP AROP MMUP GABP FRLA PUUP CYCA YJEM YCAM GADC YGJI PHEP ARCD CADB YBAT YJEH TNAB
BACSU - YBXG GABP YBGF YTNA ROCC ASPP HUTM YVBW ROCE YHDG AAPA YDGF STET YFNA ARCD YBEC YCGH YECA YDAO GERBB GERAB YNDE GERKB
HALSA - Q9HHU7 Q9HQB3 Q9HSL5
SULSO - Q7LXI7 Q97ZB5 Q97XM0 Q97U05 Q97WS3 Q97X49 Q97WD4 Q97Z63 Q97VA6 Q97VA8 Q97VR4 Q97U33 Q97Y76 Q97YN3 Q97YX9 Q97U39

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
146_T	345_G	4.466	1.00
327_I	339_N	4.361	1.00
389_R	393_K	3.389	1.00
54_Y	246_G	3.169	1.00
330_K	339_N	3.129	1.00
13_G	228_K	2.936	1.00
232_K	236_K	2.908	1.00
227_A	233_T	2.725	1.00
229_V	232_K	2.718	1.00
78_L	320_D	2.651	1.00
178_L	255_A	2.586	1.00
95_G	317_M	2.575	1.00
332_N	338_G	2.549	1.00
318_A	329_T	2.544	1.00
327_I	330_K	2.528	1.00
176_I	180_I	2.499	1.00
139_V	349_G	2.497	1.00
18_A	240_L	2.452	1.00
8_K	11_V	2.452	1.00
14_T	240_L	2.435	1.00
190_P	193_A	2.375	1.00
66_E	391_K	2.351	1.00
286_I	290_I	2.319	1.00
225_E	319_R	2.246	1.00
277_I	280_S	2.239	1.00
14_T	233_T	2.146	1.00
147_L	151_L	2.128	1.00
226_E	312_R	2.112	1.00
381_L	410_S	2.112	1.00
143_L	349_G	2.109	1.00
17_V	227_A	2.108	1.00
315_Y	319_R	2.106	1.00
14_T	18_A	2.092	1.00
82_K	91_A	2.088	1.00
139_V	352_S	2.083	1.00
264_N	281_K	2.072	1.00
146_T	341_I	2.069	1.00
150_W	338_G	2.050	1.00
154_K	158_M	2.038	1.00
400_V	403_V	2.038	1.00
342_L	346_I	2.037	1.00
445_I	449_I	2.017	1.00
397_I	400_V	2.011	1.00
85_L	389_R	2.003	1.00
407_I	411_I	1.971	1.00
236_K	240_L	1.961	1.00
165_L	169_V	1.942	1.00
13_G	16_L	1.925	1.00
82_K	87_S	1.910	1.00
321_G	326_K	1.909	1.00
188_L	191_F	1.907	1.00
416_T	419_F	1.906	1.00
99_I	344_T	1.898	1.00
138_S	352_S	1.892	1.00
328_F	343_L	1.886	1.00
55_L	59_T	1.858	1.00
85_L	385_I	1.854	1.00
63_V	384_A	1.800	1.00
404_L	408_V	1.794	1.00
261_G	264_N	1.794	1.00
143_L	345_G	1.792	1.00
7_L	331_I	1.790	1.00
38_I	46_M	1.786	1.00
439_V	443_H	1.786	1.00
229_V	233_T	1.778	1.00
16_L	161_L	1.771	1.00
239_L	243_L	1.758	1.00
277_I	281_K	1.756	1.00
413_Y	416_T	1.752	1.00
405_V	409_S	1.712	1.00
81_I	94_V	1.709	1.00
395_R	399_I	1.684	1.00
409_S	413_Y	1.671	1.00
389_R	392_V	1.659	1.00
94_V	382_F	1.641	1.00
196_V	199_N	1.637	1.00
149_M	304_I	1.629	1.00
169_V	173_I	1.626	1.00
142_T	348_T	1.619	1.00
18_A	244_L	1.613	1.00
45_S	203_I	1.599	1.00
332_N	336_V	1.597	1.00
150_W	342_L	1.587	1.00
8_K	335_G	1.573	1.00
396_M	399_I	1.573	1.00
49_V	206_S	1.566	1.00
12_L	16_L	1.562	1.00
334_Y	338_G	1.552	1.00
21_G	241_E	1.533	1.00
437_W	441_L	1.513	1.00
326_K	329_T	1.508	1.00
243_L	247_V	1.506	1.00
339_N	343_L	1.469	1.00
184_D	187_T	1.464	1.00
146_T	342_L	1.453	1.00
314_I	340_A	1.447	1.00
310_G	344_T	1.443	1.00
280_S	285_T	1.436	1.00
61_L	242_F	1.431	1.00
271_L	277_I	1.429	1.00
179_I	255_A	1.425	1.00
280_S	288_V	1.417	1.00
81_I	382_F	1.404	1.00
170_Y	294_L	1.404	1.00
289_L	293_V	1.402	1.00
223_V	308_T	1.402	1.00
151_L	334_Y	1.402	1.00
229_V	236_K	1.395	1.00
326_K	330_K	1.395	1.00
418_Y	422_Y	1.393	1.00
385_I	389_R	1.390	1.00
182_A	258_V	1.390	1.00
96_Y	443_H	1.384	1.00
16_L	157_G	1.373	1.00
416_T	420_G	1.372	1.00
315_Y	331_I	1.370	1.00
444_V	448_Y	1.359	1.00
401_K	405_V	1.348	1.00
123_S	126_I	1.335	1.00
139_V	143_L	1.335	1.00
188_L	193_A	1.335	1.00
61_L	238_L	1.332	1.00
414_I	418_Y	1.331	1.00
142_T	345_G	1.327	1.00
45_S	196_V	1.326	1.00
400_V	406_P	1.325	1.00
71_I	83_K	1.320	1.00
397_I	401_K	1.319	1.00
53_S	210_G	1.319	1.00
7_L	315_Y	1.314	1.00
230_P	235_P	1.313	1.00
60_T	384_A	1.312	1.00
55_L	408_V	1.309	1.00
448_Y	452_S	1.309	1.00
330_K	338_G	1.308	1.00
110_F	113_L	1.296	1.00
247_V	251_L	1.293	1.00
14_T	236_K	1.290	1.00
168_I	172_I	1.288	1.00
311_S	341_I	1.278	1.00
106_G	348_T	1.271	1.00
12_L	157_G	1.269	1.00
74_S	225_E	1.264	1.00
99_I	314_I	1.260	1.00
25_N	245_L	1.259	1.00
47_P	254_Y	1.255	1.00
178_L	259_V	1.247	1.00
79_A	83_K	1.240	1.00
59_T	408_V	1.238	1.00
438_A	442_I	1.238	1.00
111_G	303_T	1.236	1.00
145_T	303_T	1.229	1.00
88_S	450_L	1.227	1.00
124_P	127_A	1.226	1.00
233_T	236_K	1.224	1.00
62_L	239_L	1.222	1.00
84_G	386_A	1.219	1.00
135_A	139_V	1.217	1.00
283_F	287_T	1.215	1.00
12_L	17_V	1.212	1.00
175_S	251_L	1.211	1.00
262_V	265_M	1.207	1.00
395_R	398_N	1.200	1.00
409_S	412_A	1.190	1.00
415_L	419_F	1.188	1.00
183_G	186_N	1.186	1.00
15_W	19_S	1.176	1.00
17_V	237_A	1.173	1.00
404_L	407_I	1.170	1.00
434_Y	438_A	1.169	1.00
339_N	342_L	1.168	1.00
271_L	274_P	1.168	1.00
22_I	244_L	1.166	1.00
446_L	449_I	1.165	1.00
189_A	192_T	1.152	1.00
411_I	415_L	1.150	1.00
409_S	416_T	1.148	1.00
148_I	159_L	1.141	1.00
443_H	446_L	1.138	1.00
73_A	79_A	1.138	1.00
228_K	233_T	1.134	1.00
189_A	193_A	1.131	1.00
399_I	402_H	1.130	1.00
319_R	329_T	1.122	1.00
21_G	220_P	1.118	1.00
174_T	178_L	1.117	1.00
183_G	187_T	1.111	1.00
20_Y	223_V	1.110	1.00
449_I	452_S	1.105	1.00
430_N	433_V	1.104	1.00
159_L	163_V	1.102	1.00
314_I	323_L	1.099	1.00
64_V	77_Y	1.098	1.00
68_S	80_M	1.092	1.00
173_I	177_A	1.088	1.00
410_S	414_I	1.088	1.00
114_G	296_A	1.084	1.00
83_K	394_V	1.079	1.00
66_E	69_K	1.076	1.00
11_V	228_K	1.071	1.00
158_M	162_I	1.058	1.00
146_T	150_W	1.057	1.00
409_S	419_F	1.050	1.00
346_I	350_A	1.049	1.00
73_A	83_K	1.045	1.00
402_H	405_V	1.042	1.00
438_A	441_L	1.041	1.00
136_V	140_I	1.041	1.00
385_I	410_S	1.040	1.00
331_I	335_G	1.039	1.00
421_T	424_A	1.038	1.00
417_I	420_G	1.034	1.00
401_K	404_L	1.031	1.00
92_F	96_Y	1.028	1.00
140_I	144_E	1.025	1.00
153_V	308_T	1.020	1.00
397_I	402_H	1.019	1.00
384_A	409_S	1.018	1.00
430_N	434_Y	1.009	1.00
172_I	176_I	1.006	1.00
195_P	198_G	1.005	1.00
446_L	450_L	0.999	1.00
143_L	147_L	0.995	1.00
51_V	250_I	0.995	1.00
441_L	445_I	0.987	1.00
119_L	137_I	0.984	1.00
78_L	316_G	0.981	1.00
406_P	410_S	0.980	1.00
412_A	416_T	0.977	1.00
409_S	422_Y	0.975	1.00
160_N	304_I	0.973	1.00
259_V	278_I	0.973	1.00
261_G	281_K	0.973	1.00
163_V	301_S	0.962	1.00
406_P	420_G	0.961	1.00
401_K	406_P	0.958	1.00
407_I	410_S	0.957	1.00
409_S	420_G	0.954	1.00
418_Y	421_T	0.951	1.00
19_S	161_L	0.951	1.00
215_G	376_V	0.950	1.00
63_V	406_P	0.949	1.00
400_V	405_V	0.947	1.00
224_A	234_L	0.947	1.00
119_L	123_S	0.943	1.00
413_Y	417_I	0.940	1.00
403_V	407_I	0.937	1.00
70_D	398_N	0.935	1.00
22_I	245_L	0.934	1.00
420_G	423_P	0.934	1.00
402_H	409_S	0.931	1.00
144_E	300_N	0.928	1.00
381_L	414_I	0.926	1.00
38_I	42_A	0.925	1.00
431_I	434_Y	0.922	1.00
96_Y	323_L	0.922	1.00
406_P	409_S	0.917	1.00
404_L	409_S	0.917	1.00
246_G	250_I	0.916	1.00
174_T	279_Y	0.912	1.00
199_N	202_L	0.912	1.00
402_H	406_P	0.910	1.00
254_Y	258_V	0.908	1.00
240_L	244_L	0.906	1.00
75_Y	79_A	0.902	1.00
26_A	29_A	0.900	1.00
150_W	336_V	0.898	1.00
168_I	248_G	0.897	1.00
167_S	298_M	0.896	1.00
416_T	421_T	0.893	1.00
150_W	332_N	0.893	1.00
218_T	222_G	0.892	1.00
205_T	209_F	0.888	1.00
44_G	257_T	0.887	1.00
11_V	154_K	0.885	1.00
145_T	304_I	0.881	1.00
323_L	328_F	0.880	1.00
434_Y	437_W	0.878	1.00
110_F	302_S	0.877	1.00
381_L	385_I	0.875	1.00
388_I	407_I	0.871	1.00
47_P	257_T	0.871	1.00
175_S	255_A	0.862	1.00
54_Y	214_F	0.860	1.00
273_D	277_I	0.859	1.00
48_L	52_L	0.858	1.00
16_L	158_M	0.857	1.00
405_V	412_A	0.855	1.00
345_G	349_G	0.852	1.00
307_A	345_G	0.846	1.00
114_G	141_V	0.846	1.00
118_F	122_V	0.845	1.00
400_V	404_L	0.844	1.00
82_K	320_D	0.844	1.00
86_N	451_K	0.841	1.00
328_F	339_N	0.839	1.00
431_I	435_A	0.839	1.00
412_A	419_F	0.833	1.00
432_A	436_A	0.832	1.00
58_A	62_L	0.830	1.00
196_V	203_I	0.829	1.00
75_Y	78_L	0.821	1.00
219_T	309_S	0.819	1.00
436_A	440_L	0.817	1.00
194_Q	197_N	0.815	1.00
81_I	386_A	0.814	1.00
175_S	179_I	0.814	1.00
98_Y	102_Y	0.813	1.00
158_M	161_L	0.806	1.00
15_W	161_L	0.800	1.00
51_V	55_L	0.798	1.00
338_G	342_L	0.797	1.00
433_V	436_A	0.796	1.00
195_P	199_N	0.793	1.00
145_T	307_A	0.791	1.00
137_I	140_I	0.790	1.00
135_A	352_S	0.789	1.00
147_L	150_W	0.784	1.00
182_A	255_A	0.783	1.00
88_S	444_V	0.782	1.00
67_W	387_L	0.778	1.00
188_L	192_T	0.777	1.00
387_L	406_P	0.775	1.00
59_T	63_V	0.773	1.00
14_T	237_A	0.771	1.00
442_I	445_I	0.768	1.00
387_L	391_K	0.768	1.00
430_N	443_H	0.767	1.00
179_I	251_L	0.765	1.00
115_V	134_W	0.764	1.00
18_A	237_A	0.760	1.00
85_L	386_A	0.757	1.00
374_F	436_A	0.756	1.00
399_I	405_V	0.756	1.00
11_V	153_V	0.753	1.00
56_I	412_A	0.749	1.00
386_A	390_H	0.748	1.00
24_A	305_A	0.747	1.00
388_I	392_V	0.745	1.00
442_I	446_L	0.743	1.00
405_V	416_T	0.739	1.00
235_P	238_L	0.739	1.00
107_A	110_F	0.738	1.00
123_S	127_A	0.734	1.00
26_A	167_S	0.733	1.00
7_L	226_E	0.733	1.00
58_A	239_L	0.732	1.00
443_H	447_Y	0.730	1.00
420_G	424_A	0.729	1.00
196_V	200_W	0.728	1.00
11_V	15_W	0.728	1.00
433_V	437_W	0.727	1.00
118_F	123_S	0.727	1.00
39_A	46_M	0.727	1.00
27_P	30_V	0.725	1.00
419_F	422_Y	0.724	1.00
151_L	155_P	0.722	1.00
139_V	353_L	0.721	1.00
175_S	252_N	0.721	1.00
142_T	352_S	0.720	1.00
57_Y	217_A	0.720	1.00
197_N	200_W	0.717	1.00
441_L	444_V	0.717	1.00
114_G	118_F	0.716	1.00
111_G	114_G	0.716	1.00
432_A	435_A	0.716	1.00
48_L	203_I	0.713	1.00
318_A	328_F	0.710	1.00
27_P	249_L	0.708	1.00
332_N	335_G	0.707	1.00
333_K	338_G	0.705	1.00
200_W	204_L	0.701	1.00
346_I	349_G	0.700	1.00
286_I	289_L	0.700	1.00
150_W	334_Y	0.700	1.00
284_S	287_T	0.699	1.00
381_L	413_Y	0.697	1.00
412_A	415_L	0.696	1.00
412_A	421_T	0.694	1.00
25_N	241_E	0.694	1.00
435_A	438_A	0.692	1.00
405_V	408_V	0.691	1.00
157_G	161_L	0.691	1.00
413_Y	419_F	0.691	1.00
113_L	117_S	0.689	1.00
244_L	248_G	0.688	1.00
177_A	181_I	0.687	1.00
84_G	389_R	0.687	1.00
432_A	443_H	0.685	1.00
371_F	375_Y	0.684	1.00
15_W	158_M	0.684	1.00
48_L	51_V	0.683	1.00
105_A	372_G	0.683	1.00
285_T	289_L	0.682	1.00
417_I	421_T	0.682	1.00
410_S	413_Y	0.681	1.00
409_S	423_P	0.681	1.00
413_Y	421_T	0.678	1.00
67_W	80_M	0.677	1.00
388_I	406_P	0.677	1.00
101_Q	376_V	0.676	1.00
78_L	82_K	0.675	1.00
321_G	325_P	0.675	1.00
33_L	369_I	0.675	1.00
36_V	366_I	0.674	1.00
115_V	118_F	0.672	1.00
410_S	421_T	0.670	1.00
180_I	183_G	0.669	1.00
229_V	235_P	0.668	1.00
46_M	253_A	0.668	1.00
415_L	418_Y	0.666	1.00
215_G	380_H	0.663	1.00
198_G	201_V	0.659	1.00
252_N	275_M	0.658	1.00
364_A	367_F	0.657	1.00
149_M	341_I	0.657	1.00
26_A	31_A	0.656	1.00
142_T	349_G	0.653	1.00
111_G	142_T	0.652	1.00
78_L	95_G	0.652	1.00
149_M	308_T	0.651	1.00
327_I	343_L	0.650	1.00
111_G	115_V	0.650	1.00
314_I	343_L	0.649	1.00
118_F	121_L	0.649	1.00
64_V	383_A	0.648	1.00
117_S	121_L	0.647	1.00
398_N	402_H	0.646	1.00
406_P	413_Y	0.645	1.00
413_Y	420_G	0.644	1.00
31_A	35_F	0.644	1.00
424_A	430_N	0.644	1.00
47_P	51_V	0.644	1.00
395_R	400_V	0.642	1.00
251_L	255_A	0.642	1.00
412_A	420_G	0.642	1.00
155_P	158_M	0.640	1.00
67_W	84_G	0.639	1.00
328_F	340_A	0.638	1.00
448_Y	451_K	0.637	1.00
406_P	423_P	0.636	1.00
74_S	315_Y	0.635	1.00
384_A	412_A	0.635	1.00
143_L	146_T	0.634	1.00
115_V	119_L	0.633	1.00
61_L	217_A	0.633	1.00
412_A	423_P	0.633	1.00
77_Y	218_T	0.632	1.00
240_L	243_L	0.630	1.00
419_F	423_P	0.630	1.00
68_S	221_V	0.627	1.00
120_Y	124_P	0.625	1.00
7_L	312_R	0.624	1.00
337_P	340_A	0.624	1.00
307_A	311_S	0.622	1.00
18_A	21_G	0.622	1.00
145_T	300_N	0.621	1.00
50_T	213_T	0.619	1.00
311_S	340_A	0.618	1.00
446_L	451_K	0.617	1.00
406_P	416_T	0.617	1.00
110_F	114_G	0.617	1.00
24_A	306_F	0.617	1.00
200_W	203_I	0.616	1.00
225_E	315_Y	0.616	1.00
84_G	390_H	0.616	1.00
88_S	93_T	0.615	1.00
152_G	155_P	0.615	1.00
343_L	347_I	0.615	1.00
65_Y	69_K	0.614	1.00
141_V	303_T	0.614	1.00
402_H	419_F	0.613	1.00
390_H	394_V	0.613	1.00
135_A	138_S	0.612	1.00
59_T	405_V	0.608	1.00
103_L	347_I	0.606	1.00
115_V	137_I	0.605	1.00
312_R	315_Y	0.604	1.00
112_V	368_L	0.604	1.00
252_N	256_Q	0.603	1.00
68_S	234_L	0.602	1.00
23_A	164_G	0.601	1.00
375_Y	379_G	0.601	1.00
399_I	403_V	0.599	1.00
39_A	42_A	0.599	1.00
327_I	331_I	0.598	1.00
122_V	125_S	0.597	1.00
30_V	34_Y	0.597	1.00
416_T	423_P	0.596	1.00
52_L	207_M	0.595	1.00
78_L	91_A	0.593	1.00
29_A	35_F	0.593	1.00
103_L	344_T	0.592	1.00
111_G	117_S	0.591	1.00
202_L	205_T	0.590	1.00
177_A	283_F	0.590	1.00
293_V	297_F	0.590	1.00
215_G	218_T	0.589	1.00
274_P	279_Y	0.589	1.00
17_V	223_V	0.588	1.00
392_V	403_V	0.586	1.00
310_G	314_I	0.586	1.00
150_W	341_I	0.584	1.00
298_M	301_S	0.583	1.00
440_L	444_V	0.582	1.00
227_A	234_L	0.582	1.00
190_P	195_P	0.581	1.00
53_S	211_I	0.581	1.00
116_T	134_W	0.580	1.00
443_H	450_L	0.579	1.00
222_G	309_S	0.579	1.00
161_L	165_L	0.579	1.00
140_I	143_L	0.579	1.00
384_A	410_S	0.578	1.00
111_G	116_T	0.577	1.00
81_I	91_A	0.577	1.00
155_P	159_L	0.575	1.00
405_V	413_Y	0.574	1.00
234_L	238_L	0.573	1.00
153_V	223_V	0.572	1.00
76_G	221_V	0.572	1.00
157_G	304_I	0.571	1.00
445_I	448_Y	0.571	1.00
97_G	379_G	0.571	1.00
166_I	170_Y	0.570	1.00
401_K	420_G	0.570	1.00
436_A	443_H	0.568	1.00
269_A	274_P	0.567	1.00
30_V	35_F	0.566	1.00
104_V	371_F	0.566	1.00
349_G	352_S	0.565	1.00
94_V	379_G	0.564	1.00
61_L	65_Y	0.564	1.00
338_G	341_I	0.563	1.00
91_A	95_G	0.563	1.00
396_M	401_K	0.562	1.00
221_V	238_L	0.562	1.00
366_I	369_I	0.562	1.00
116_T	119_L	0.561	1.00
439_V	446_L	0.560	1.00
66_E	70_D	0.558	1.00
231_K	396_M	0.558	1.00
122_V	126_I	0.558	1.00
255_A	258_V	0.558	1.00
350_A	353_L	0.556	1.00
406_P	421_T	0.556	1.00
431_I	436_A	0.556	1.00
230_P	233_T	0.554	1.00
146_T	307_A	0.554	1.00
70_D	390_H	0.554	1.00
15_W	18_A	0.553	1.00
53_S	214_F	0.551	1.00
113_L	118_F	0.550	1.00
399_I	406_P	0.550	1.00
26_A	248_G	0.549	1.00
279_Y	284_S	0.548	1.00
22_I	26_A	0.547	1.00
244_L	251_L	0.546	1.00
204_L	208_I	0.545	1.00
415_L	421_T	0.545	1.00
77_Y	222_G	0.545	1.00
325_P	328_F	0.543	1.00
102_Y	306_F	0.543	1.00
408_V	411_I	0.543	1.00
103_L	107_A	0.543	1.00
47_P	250_I	0.543	1.00
180_I	184_D	0.543	1.00
376_V	379_G	0.542	1.00
156_G	308_T	0.541	1.00
226_E	337_P	0.541	1.00
260_Y	264_N	0.540	1.00
31_A	167_S	0.540	1.00
88_S	448_Y	0.539	1.00
44_G	47_P	0.539	1.00
244_L	247_V	0.538	1.00
279_Y	287_T	0.538	1.00
177_A	284_S	0.538	1.00
13_G	154_K	0.534	1.00
215_G	372_G	0.534	1.00
270_N	274_P	0.534	1.00
433_V	439_V	0.534	1.00
93_T	97_G	0.534	1.00
101_Q	375_Y	0.533	1.00
22_I	164_G	0.533	1.00
273_D	276_V	0.533	1.00
24_A	219_T	0.531	1.00
415_L	420_G	0.531	1.00
166_I	294_L	0.531	1.00
26_A	30_V	0.530	1.00
397_I	405_V	0.529	1.00
437_W	443_H	0.528	1.00
114_G	300_N	0.528	1.00
110_F	303_T	0.526	1.00
398_N	401_K	0.526	1.00
220_P	234_L	0.526	1.00
144_E	148_I	0.526	1.00
331_I	334_Y	0.525	1.00
409_S	415_L	0.524	1.00
439_V	442_I	0.524	1.00
97_G	378_L	0.522	1.00
41_L	206_S	0.521	1.00
437_W	440_L	0.518	1.00
269_A	272_P	0.517	1.00
197_N	201_V	0.515	1.00
388_I	410_S	0.514	1.00
107_A	351_L	0.513	1.00
160_N	301_S	0.512	1.00
70_D	395_R	0.509	1.00
32_T	36_V	0.509	1.00
34_Y	253_A	0.508	1.00
118_F	296_A	0.508	1.00
164_G	167_S	0.507	1.00
12_L	153_V	0.506	1.00
433_V	440_L	0.504	1.00
32_T	35_F	0.503	1.00
162_I	165_L	0.503	1.00
24_A	27_P	0.503	1.00
226_E	331_I	0.502	1.00
402_H	412_A	0.502	1.00
406_P	412_A	0.501	1.00
303_T	306_F	0.501	1.00
432_A	439_V	0.501	1.00
400_V	409_S	0.501	1.00
435_A	447_Y	0.500	1.00
97_G	101_Q	0.500	1.00
10_E	228_K	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3l1lA	2	0.9077	100	0.281	Contact Map
3giaA	1	0.9292	100	0.333	Contact Map
4djkA	2	0.8991	100	0.361	Contact Map
3dh4A	3	0.912	99.1	0.845	Contact Map
2xq2A	2	0.9099	99	0.848	Contact Map
2jlnA	1	0.8884	98.8	0.861	Contact Map
2a65A	2	0.9313	97.5	0.902	Contact Map
4wgvA	2	0.7833	97.4	0.904	Contact Map
4xp4A	1	0.9399	96.6	0.914	Contact Map
4us3A	1	0.8519	96.3	0.916	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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