Q7LXD0 - SULSO - GREMLIN Contacts

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Q7LXD0 - Microtubule binding protein, putative

UniProt:	Q7LXD0	Sequences: MLKDDILKLLKEDAEFRKQVEEILGISFINVTLADLKDILKGLLASMDKLKSSVDQLVDAQRRAEERIAKLENAVEQLVEAQKRTDERITKLEESTKKLEQAVQELIEAQKKHDERITKLEESTKKLEQAVQELIEAQKKHDERITKLEESTKKLEQAVQELIEAQKKHDERITKLEESTKKLEQAVQELIEAQKKHDERITKLEESTKKLEQAVQELIEAQKKHDERITKLEESTKKLEQAVQELIEAQKKHDERITKLEESIQKLVDAQRRAEERIAKLENAVEQLVEAQKRTDERITKLEEVTMKLVESQLGMQNEIRELRKALGSMGKRWGRDFEKLIIEIVDELAKQEGLDLKYVNKFTYKDDNGLFGLKGVEYDVDLLIKDTKVYLIEIKSYVEKDDVNWAAHKFNVIEKALGLKNTIKMIFAVDATNLATKKGEELGIKVVYGSQSEEEEKGEVKVG	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	464 (388)
Sequences:	8904 (8382)
Seq/√Len:	425.5

BACSU - SMC
HALSA - Q9HS95
SULSO - Q7LXD0

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
303_E	307_M	2.414	1.00
280_K	284_A	2.083	1.00
154_K	158_A	2.067	1.00
98_K	102_A	2.030	1.00
313_Q	317_Q	2.005	1.00
112_K	116_R	1.971	1.00
203_K	207_S	1.931	1.00
175_K	179_S	1.915	1.00
174_T	177_E	1.907	1.00
49_K	53_S	1.863	1.00
91_K	95_S	1.858	1.00
105_E	109_A	1.848	1.00
210_K	214_A	1.838	1.00
145_I	149_E	1.835	1.00
314_L	318_N	1.822	1.00
124_T	128_E	1.802	1.00
153_K	156_E	1.774	1.00
22_E	25_G	1.773	1.00
236_T	240_E	1.762	1.00
63_R	67_R	1.758	1.00
182_K	186_A	1.743	1.00
277_R	280_K	1.730	1.00
307_M	311_E	1.730	1.00
56_Q	60_A	1.719	1.00
289_V	292_Q	1.713	1.00
28_F	32_T	1.712	1.00
153_K	157_Q	1.711	1.00
187_V	191_I	1.704	1.00
217_E	221_A	1.699	1.00
53_S	56_Q	1.672	1.00
299_I	303_E	1.670	1.00
229_I	233_E	1.669	1.00
61_Q	65_E	1.667	1.00
370_G	373_G	1.662	1.00
306_T	310_V	1.656	1.00
70_K	74_A	1.652	1.00
46_S	49_K	1.651	1.00
195_K	198_D	1.646	1.00
166_Q	170_D	1.644	1.00
152_T	156_E	1.642	1.00
320_I	324_R	1.635	1.00
35_D	39_I	1.634	1.00
133_E	137_A	1.628	1.00
140_K	144_R	1.627	1.00
240_E	244_Q	1.617	1.00
147_K	151_S	1.609	1.00
243_V	247_I	1.593	1.00
224_K	228_R	1.587	1.00
167_K	171_E	1.582	1.00
71_L	74_A	1.582	1.00
174_T	178_E	1.581	1.00
212_E	216_Q	1.578	1.00
181_K	184_E	1.570	1.00
126_K	130_A	1.569	1.00
215_V	219_I	1.565	1.00
90_T	93_E	1.562	1.00
88_R	91_K	1.540	1.00
69_A	72_E	1.537	1.00
84_R	88_R	1.536	1.00
83_K	86_D	1.530	1.00
188_Q	191_I	1.517	1.00
318_N	322_E	1.500	1.00
239_L	242_A	1.493	1.00
104_Q	107_I	1.489	1.00
100_E	104_Q	1.486	1.00
234_E	238_K	1.481	1.00
275_E	279_A	1.465	1.00
111_K	114_D	1.465	1.00
231_K	235_S	1.464	1.00
308_K	312_S	1.462	1.00
37_K	41_K	1.456	1.00
119_K	123_S	1.453	1.00
256_R	259_K	1.453	1.00
146_T	149_E	1.451	1.00
167_K	170_D	1.445	1.00
118_T	121_E	1.429	1.00
33_L	36_L	1.428	1.00
165_A	168_K	1.427	1.00
184_E	188_Q	1.423	1.00
201_I	205_E	1.423	1.00
125_K	128_E	1.414	1.00
144_R	147_K	1.413	1.00
244_Q	247_I	1.411	1.00
151_S	154_K	1.409	1.00
253_H	256_R	1.404	1.00
180_T	184_E	1.403	1.00
60_A	63_R	1.402	1.00
108_E	112_K	1.400	1.00
196_K	200_R	1.397	1.00
32_T	36_L	1.396	1.00
225_H	228_R	1.394	1.00
214_A	217_E	1.394	1.00
265_Q	268_V	1.390	1.00
132_Q	135_I	1.390	1.00
36_L	39_I	1.387	1.00
122_E	126_K	1.364	1.00
258_T	261_E	1.363	1.00
273_R	277_R	1.362	1.00
138_Q	142_D	1.356	1.00
329_S	333_R	1.353	1.00
227_E	231_K	1.347	1.00
322_E	326_A	1.344	1.00
75_V	78_L	1.342	1.00
230_T	233_E	1.341	1.00
101_Q	105_E	1.336	1.00
75_V	79_V	1.336	1.00
40_L	43_L	1.331	1.00
96_T	100_E	1.331	1.00
27_S	31_V	1.328	1.00
321_R	325_K	1.326	1.00
74_A	78_L	1.324	1.00
344_E	348_E	1.324	1.00
371_L	374_L	1.324	1.00
289_V	293_K	1.323	1.00
298_R	301_K	1.323	1.00
103_V	107_I	1.321	1.00
55_D	58_V	1.319	1.00
110_Q	114_D	1.316	1.00
320_I	323_L	1.314	1.00
131_V	135_I	1.314	1.00
139_K	143_E	1.313	1.00
310_V	314_L	1.309	1.00
345_I	349_L	1.309	1.00
233_E	237_K	1.307	1.00
299_I	302_L	1.307	1.00
136_E	140_K	1.305	1.00
200_R	203_K	1.305	1.00
172_R	175_K	1.305	1.00
306_T	309_L	1.304	1.00
219_I	223_K	1.298	1.00
159_V	163_I	1.295	1.00
168_K	172_R	1.290	1.00
137_A	140_K	1.289	1.00
251_K	254_D	1.287	1.00
345_I	348_E	1.283	1.00
264_I	268_V	1.282	1.00
54_V	58_V	1.281	1.00
173_I	177_E	1.278	1.00
237_K	240_E	1.278	1.00
47_M	51_K	1.276	1.00
48_D	51_K	1.275	1.00
283_N	287_Q	1.269	1.00
44_L	48_D	1.264	1.00
238_K	242_A	1.262	1.00
301_K	305_V	1.254	1.00
198_D	202_T	1.244	1.00
193_A	196_K	1.241	1.00
297_E	301_K	1.239	1.00
97_K	100_E	1.239	1.00
42_G	46_S	1.236	1.00
76_E	79_V	1.234	1.00
65_E	69_A	1.228	1.00
278_I	281_L	1.227	1.00
129_Q	133_E	1.226	1.00
43_L	46_S	1.221	1.00
242_A	245_E	1.221	1.00
348_E	352_Q	1.221	1.00
138_Q	141_H	1.219	1.00
211_L	214_A	1.211	1.00
319_E	322_E	1.210	1.00
123_S	126_K	1.205	1.00
305_V	308_K	1.205	1.00
161_E	165_A	1.205	1.00
77_Q	81_A	1.199	1.00
57_L	60_A	1.198	1.00
130_A	133_E	1.198	1.00
202_T	206_E	1.195	1.00
157_Q	161_E	1.191	1.00
189_E	193_A	1.191	1.00
294_R	298_R	1.180	1.00
250_Q	253_H	1.177	1.00
110_Q	113_H	1.173	1.00
25_G	28_F	1.169	1.00
74_A	77_Q	1.165	1.00
81_A	85_T	1.164	1.00
285_V	288_L	1.164	1.00
186_A	189_E	1.162	1.00
38_D	41_K	1.162	1.00
222_Q	226_D	1.158	1.00
170_D	174_T	1.158	1.00
82_Q	86_D	1.156	1.00
259_K	263_S	1.153	1.00
68_I	71_L	1.152	1.00
276_E	280_K	1.150	1.00
38_D	42_G	1.148	1.00
89_I	93_E	1.147	1.00
315_G	319_E	1.146	1.00
209_K	212_E	1.144	1.00
281_L	285_V	1.144	1.00
312_S	315_G	1.142	1.00
156_E	160_Q	1.141	1.00
82_Q	85_T	1.140	1.00
300_T	304_E	1.139	1.00
252_K	256_R	1.137	1.00
109_A	112_K	1.131	1.00
157_Q	160_Q	1.128	1.00
235_S	238_K	1.126	1.00
144_R	148_L	1.125	1.00
139_K	142_D	1.122	1.00
39_I	42_G	1.120	1.00
164_E	168_K	1.115	1.00
41_K	44_L	1.114	1.00
405_N	409_H	1.113	1.00
86_D	90_T	1.105	1.00
68_I	72_E	1.105	1.00
188_Q	192_E	1.105	1.00
160_Q	164_E	1.103	1.00
202_T	205_E	1.102	1.00
158_A	162_L	1.101	1.00
121_E	125_K	1.099	1.00
310_V	313_Q	1.096	1.00
49_K	52_S	1.095	1.00
221_A	224_K	1.093	1.00
313_Q	316_M	1.091	1.00
162_L	165_A	1.091	1.00
244_Q	248_E	1.086	1.00
245_E	249_A	1.086	1.00
158_A	161_E	1.082	1.00
195_K	199_E	1.082	1.00
171_E	174_T	1.079	1.00
183_L	186_A	1.076	1.00
97_K	101_Q	1.072	1.00
327_L	330_M	1.071	1.00
266_K	270_A	1.070	1.00
213_Q	217_E	1.067	1.00
137_A	141_H	1.066	1.00
241_Q	245_E	1.065	1.00
249_A	252_K	1.065	1.00
307_M	310_V	1.063	1.00
186_A	190_L	1.054	1.00
58_V	61_Q	1.053	1.00
83_K	87_E	1.051	1.00
146_T	150_E	1.051	1.00
255_E	258_T	1.038	1.00
22_E	29_I	1.037	1.00
347_D	351_K	1.034	1.00
150_E	154_K	1.034	1.00
216_Q	219_I	1.033	1.00
194_Q	198_D	1.033	1.00
62_R	65_E	1.033	1.00
185_Q	189_E	1.029	1.00
34_A	37_K	1.029	1.00
250_Q	254_D	1.027	1.00
228_R	231_K	1.017	1.00
95_S	99_L	1.015	1.00
115_E	119_K	1.012	1.00
381_V	386_K	1.011	1.00
221_A	225_H	1.011	1.00
226_D	230_T	1.011	1.00
125_K	129_Q	1.010	1.00
326_A	329_S	1.008	1.00
335_G	339_E	1.008	1.00
251_K	255_E	1.008	1.00
317_Q	321_R	1.008	1.00
283_N	286_E	1.007	1.00
21_E	25_G	1.004	1.00
95_S	98_K	1.004	1.00
32_T	35_D	1.003	1.00
51_K	55_D	0.994	1.00
191_I	195_K	0.992	1.00
208_T	212_E	0.991	1.00
94_E	98_K	0.988	1.00
328_G	332_K	0.985	1.00
151_S	155_L	0.984	1.00
190_L	193_A	0.982	1.00
209_K	213_Q	0.982	1.00
58_V	62_R	0.982	1.00
25_G	29_I	0.981	1.00
102_A	105_E	0.976	1.00
33_L	37_K	0.976	1.00
247_I	251_K	0.971	1.00
381_V	384_L	0.969	1.00
236_T	239_L	0.963	1.00
255_E	259_K	0.963	1.00
297_E	300_T	0.963	1.00
181_K	185_Q	0.963	1.00
118_T	122_E	0.961	1.00
45_A	49_K	0.959	1.00
23_I	27_S	0.956	1.00
48_D	52_S	0.955	1.00
230_T	234_E	0.944	1.00
67_R	70_K	0.943	1.00
340_K	343_I	0.941	1.00
134_L	138_Q	0.941	1.00
66_E	70_K	0.940	1.00
159_V	162_L	0.939	1.00
76_E	80_E	0.933	1.00
287_Q	291_A	0.927	1.00
285_V	289_V	0.924	1.00
57_L	61_Q	0.922	1.00
237_K	241_Q	0.919	1.00
192_E	196_K	0.916	1.00
96_T	99_L	0.916	1.00
164_E	167_K	0.913	1.00
134_L	137_A	0.912	1.00
145_I	148_L	0.910	1.00
135_I	139_K	0.908	1.00
178_E	181_K	0.904	1.00
229_I	236_T	0.903	1.00
279_A	282_E	0.900	1.00
300_T	303_E	0.899	1.00
72_E	76_E	0.898	1.00
166_Q	169_H	0.892	1.00
326_A	331_G	0.890	1.00
324_R	328_G	0.890	1.00
104_Q	108_E	0.889	1.00
216_Q	220_E	0.886	1.00
155_L	158_A	0.886	1.00
47_M	50_L	0.886	1.00
73_N	77_Q	0.884	1.00
334_W	338_F	0.883	1.00
87_E	91_K	0.883	1.00
233_E	236_T	0.882	1.00
333_R	336_R	0.881	1.00
398_Y	410_K	0.881	1.00
109_A	113_H	0.881	1.00
52_S	56_Q	0.880	1.00
288_L	292_Q	0.879	1.00
359_Y	362_K	0.876	1.00
81_A	84_R	0.875	1.00
160_Q	163_I	0.875	1.00
92_L	95_S	0.874	1.00
220_E	224_K	0.874	1.00
27_S	30_N	0.871	1.00
142_D	146_T	0.868	1.00
331_G	335_G	0.865	1.00
208_T	211_L	0.865	1.00
194_Q	197_H	0.863	1.00
64_A	67_R	0.862	1.00
205_E	208_T	0.859	1.00
254_D	258_T	0.857	1.00
272_R	275_E	0.854	1.00
319_E	324_R	0.854	1.00
328_G	331_G	0.853	1.00
372_F	376_G	0.851	1.00
24_L	28_F	0.851	1.00
243_V	246_L	0.850	1.00
272_R	276_E	0.849	1.00
264_I	267_L	0.847	1.00
114_D	118_T	0.846	1.00
229_I	232_L	0.843	1.00
50_L	53_S	0.842	1.00
127_L	130_A	0.841	1.00
386_K	389_K	0.841	1.00
304_E	308_K	0.841	1.00
152_T	155_L	0.841	1.00
249_A	253_H	0.840	1.00
206_E	210_K	0.836	1.00
26_I	30_N	0.835	1.00
34_A	38_D	0.834	1.00
193_A	197_H	0.833	1.00
163_I	167_K	0.833	1.00
346_V	350_A	0.829	1.00
296_D	300_T	0.828	1.00
22_E	26_I	0.827	1.00
93_E	97_K	0.827	1.00
263_S	266_K	0.824	1.00
53_S	57_L	0.824	1.00
207_S	210_K	0.819	1.00
332_K	336_R	0.819	1.00
248_E	252_K	0.818	1.00
147_K	150_E	0.818	1.00
182_K	185_Q	0.817	1.00
172_R	176_L	0.816	1.00
107_I	111_K	0.815	1.00
327_L	331_G	0.815	1.00
262_E	266_K	0.814	1.00
241_Q	244_Q	0.813	1.00
333_R	337_D	0.813	1.00
285_V	292_Q	0.811	1.00
90_T	94_E	0.806	1.00
401_K	405_N	0.805	1.00
231_K	234_E	0.805	1.00
121_E	124_T	0.804	1.00
390_V	393_I	0.802	1.00
354_G	358_K	0.802	1.00
383_L	386_K	0.800	1.00
344_E	347_D	0.798	1.00
222_Q	225_H	0.795	1.00
128_E	131_V	0.794	1.00
282_E	286_E	0.792	1.00
286_E	289_V	0.789	1.00
140_K	143_E	0.785	1.00
223_K	227_E	0.783	1.00
376_G	380_D	0.783	1.00
284_A	287_Q	0.782	1.00
218_L	221_A	0.780	1.00
334_W	337_D	0.779	1.00
305_V	309_L	0.778	1.00
179_S	182_K	0.778	1.00
391_Y	395_I	0.777	1.00
228_R	232_L	0.772	1.00
43_L	47_M	0.771	1.00
265_Q	269_D	0.768	1.00
116_R	119_K	0.767	1.00
39_I	43_L	0.765	1.00
374_L	379_Y	0.763	1.00
238_K	241_Q	0.763	1.00
368_D	374_L	0.763	1.00
171_E	175_K	0.761	1.00
288_L	291_A	0.756	1.00
319_E	323_L	0.755	1.00
227_E	230_T	0.755	1.00
113_H	116_R	0.754	1.00
179_S	183_L	0.753	1.00
141_H	144_R	0.750	1.00
124_T	127_L	0.749	1.00
350_A	353_E	0.747	1.00
89_I	92_L	0.744	1.00
88_R	92_L	0.744	1.00
71_L	75_V	0.743	1.00
143_E	147_K	0.737	1.00
382_D	386_K	0.737	1.00
154_K	157_Q	0.735	1.00
111_K	115_E	0.734	1.00
384_L	389_K	0.732	1.00
217_E	220_E	0.730	1.00
150_E	153_K	0.729	1.00
353_E	356_D	0.729	1.00
316_M	320_I	0.725	1.00
54_V	57_L	0.722	1.00
390_V	396_K	0.721	1.00
93_E	96_T	0.720	1.00
390_V	401_K	0.720	1.00
248_E	251_K	0.718	1.00
31_V	34_A	0.716	1.00
106_L	109_A	0.713	1.00
302_L	305_V	0.712	1.00
131_V	134_L	0.712	1.00
213_Q	216_Q	0.712	1.00
41_K	45_A	0.711	1.00
299_I	306_T	0.710	1.00
197_H	200_R	0.709	1.00
46_S	50_L	0.701	1.00
301_K	304_E	0.701	1.00
304_E	307_M	0.700	1.00
321_R	324_R	0.700	1.00
232_L	235_S	0.699	1.00
376_G	379_Y	0.698	1.00
165_A	169_H	0.692	1.00
311_E	314_L	0.692	1.00
128_E	132_Q	0.691	1.00
389_K	396_K	0.690	1.00
94_E	97_K	0.689	1.00
101_Q	104_Q	0.689	1.00
356_D	362_K	0.689	1.00
69_A	73_N	0.688	1.00
143_E	146_T	0.685	1.00
192_E	195_K	0.680	1.00
77_Q	80_E	0.678	1.00
224_K	227_E	0.677	1.00
271_Q	275_E	0.676	1.00
384_L	391_Y	0.675	1.00
279_A	283_N	0.674	1.00
30_N	34_A	0.671	1.00
393_I	400_E	0.671	1.00
382_D	397_S	0.666	1.00
388_T	396_K	0.666	1.00
262_E	265_Q	0.664	1.00
70_K	73_N	0.664	1.00
103_V	106_L	0.664	1.00
278_I	282_E	0.658	0.99
401_K	404_V	0.657	0.99
291_A	295_T	0.657	0.99
201_I	204_L	0.655	0.99
55_D	59_D	0.655	0.99
257_I	261_E	0.654	0.99
404_V	408_A	0.652	0.99
175_K	178_E	0.652	0.99
345_I	350_A	0.649	0.99
392_L	411_F	0.642	0.99
79_V	83_K	0.642	0.99
311_E	315_G	0.641	0.99
257_I	260_L	0.640	0.99
87_E	90_T	0.639	0.99
314_L	317_Q	0.639	0.99
162_L	166_Q	0.637	0.99
169_H	172_R	0.635	0.99
271_Q	274_A	0.633	0.99
356_D	361_N	0.632	0.99
403_D	406_W	0.630	0.99
316_M	319_E	0.629	0.99
108_E	111_K	0.627	0.99
390_V	395_I	0.626	0.99
120_L	123_S	0.625	0.99
142_D	145_I	0.624	0.99
161_E	164_E	0.623	0.99
92_L	96_T	0.622	0.99
349_L	352_Q	0.620	0.99
132_Q	136_E	0.620	0.99
219_I	222_Q	0.620	0.99
136_E	139_K	0.620	0.99
29_I	33_L	0.617	0.99
292_Q	296_D	0.616	0.99
59_D	62_R	0.614	0.99
129_Q	132_Q	0.613	0.99
36_L	40_L	0.612	0.99
199_E	203_K	0.608	0.99
234_E	237_K	0.604	0.99
29_I	32_T	0.604	0.99
214_A	218_L	0.603	0.99
246_L	249_A	0.603	0.99
367_D	370_G	0.601	0.99
51_K	54_V	0.600	0.99
330_M	334_W	0.598	0.99
359_Y	380_D	0.597	0.99
177_E	181_K	0.596	0.99
187_V	190_L	0.595	0.99
99_L	103_V	0.595	0.99
177_E	180_T	0.593	0.99
105_E	108_E	0.592	0.99
212_E	215_V	0.592	0.99
85_T	88_R	0.591	0.99
116_R	120_L	0.590	0.99
280_K	283_N	0.589	0.99
235_S	239_L	0.588	0.99
409_H	412_N	0.584	0.99
45_A	48_D	0.584	0.99
295_T	299_I	0.583	0.99
25_G	30_N	0.583	0.99
266_K	269_D	0.583	0.99
197_H	201_I	0.581	0.99
258_T	262_E	0.581	0.99
346_V	349_L	0.579	0.99
178_E	182_K	0.577	0.99
204_L	207_S	0.576	0.99
196_K	199_E	0.575	0.99
396_K	400_E	0.575	0.99
173_I	176_L	0.572	0.99
327_L	334_W	0.571	0.99
141_H	145_I	0.571	0.99
180_T	183_L	0.569	0.98
323_L	327_L	0.567	0.98
99_L	102_A	0.567	0.98
50_L	54_V	0.565	0.98
339_E	343_I	0.563	0.98
203_K	206_E	0.563	0.98
389_K	395_I	0.562	0.98
385_I	390_V	0.561	0.98
401_K	406_W	0.559	0.98
290_E	294_R	0.559	0.98
359_Y	363_F	0.558	0.98
191_I	194_Q	0.555	0.98
269_D	273_R	0.554	0.98
117_I	121_E	0.554	0.98
26_I	29_I	0.554	0.98
309_L	313_Q	0.553	0.98
381_V	385_I	0.551	0.98
78_L	82_Q	0.551	0.98
149_E	153_K	0.551	0.98
384_L	408_A	0.549	0.98
84_R	87_E	0.547	0.98
388_T	393_I	0.545	0.98
148_L	151_S	0.542	0.98
252_K	255_E	0.541	0.98
31_V	35_D	0.538	0.98
242_A	246_L	0.538	0.98
392_L	395_I	0.538	0.98
302_L	306_T	0.537	0.98
184_E	187_V	0.534	0.98
59_D	63_R	0.534	0.98
204_L	208_T	0.532	0.98
68_I	75_V	0.531	0.98
393_I	403_D	0.529	0.98
395_I	400_E	0.524	0.97
117_I	120_L	0.522	0.97
326_A	330_M	0.518	0.97
318_N	321_R	0.518	0.97
67_R	71_L	0.514	0.97
377_V	380_D	0.513	0.97
317_Q	320_I	0.513	0.97
388_T	395_I	0.512	0.97
72_E	75_V	0.509	0.97
347_D	350_A	0.508	0.97
345_I	351_K	0.506	0.97
200_R	204_L	0.505	0.97
371_L	375_K	0.505	0.97
63_R	66_E	0.504	0.97
128_E	135_I	0.503	0.97
348_E	351_K	0.500	0.97
404_V	407_A	0.500	0.97
355_L	358_K	0.500	0.97

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1i84S	2	0.2435	99.7	0.546	Contact Map
1c1gA	2	0.6121	99.5	0.618	Contact Map
4uxvA	1	0.9289	97.9	0.789	Contact Map
2dfsA	2	0.3405	96.7	0.828	Contact Map
4linA	5	0.5194	96.5	0.833	Contact Map
2v71A	3	0.3448	96.4	0.834	Contact Map
3o0zA	2	0.3448	96.3	0.836	Contact Map
4rsiB	1	0.5603	95.8	0.842	Contact Map
4iloA	3	0.4806	95.6	0.845	Contact Map
3na7A	1	0.5	95.1	0.85	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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