GREMLIN Database
Q7LXA2 - Carbon monoxide dehydrogenase, large chain (CutA-2)
UniProt: Q7LXA2 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 698 (685)
Sequences: 5602 (3651)
Seq/√Len: 139.5

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
50_R109_L4.5771.00
160_E271_H4.2111.00
30_I110_V4.1401.00
99_D102_E3.7791.00
34_Y37_A3.6231.00
46_D111_Q3.6111.00
365_K391_D3.6091.00
162_D269_K3.5041.00
398_D401_A3.4161.00
274_Y352_I3.3551.00
284_D317_R3.3141.00
275_S279_R3.3011.00
456_A496_V3.2551.00
156_G275_S3.1371.00
156_G276_S3.1251.00
50_R102_E3.0871.00
358_I366_I3.0691.00
40_V113_D3.0551.00
38_R115_E3.0091.00
150_G154_T3.0041.00
30_I107_A2.9831.00
435_I462_I2.9761.00
280_V349_M2.9471.00
147_F150_G2.8801.00
34_Y116_P2.8631.00
37_A114_Y2.8241.00
160_E269_K2.8221.00
53_L98_N2.8131.00
286_H319_T2.8011.00
459_L501_E2.7491.00
312_K373_P2.6871.00
96_I238_A2.6641.00
271_H284_D2.6071.00
189_I203_I2.6041.00
362_D366_I2.5941.00
36_H117_L2.5711.00
41_N113_D2.5641.00
188_T214_K2.4691.00
497_S501_E2.4531.00
98_N102_E2.4221.00
27_A248_W2.4191.00
580_K644_E2.4141.00
526_Y534_K2.4141.00
279_R366_I2.4091.00
152_L273_Y2.3501.00
40_V115_E2.3451.00
98_N244_V2.2991.00
212_V473_D2.2931.00
124_E267_K2.2921.00
688_R695_D2.2761.00
678_I691_V2.2751.00
675_T691_V2.2741.00
181_I190_I2.2611.00
352_I363_V2.2031.00
286_H321_T2.2011.00
44_K48_E2.1991.00
358_I363_V2.1931.00
570_R579_I2.1781.00
290_D327_K2.1611.00
155_Q273_Y2.1341.00
186_S475_T2.1201.00
397_K566_L2.1201.00
272_A348_T2.1121.00
29_F234_V2.0721.00
27_A94_L2.0521.00
392_L646_N2.0361.00
392_L395_S2.0281.00
434_K466_D2.0031.00
164_Y688_R1.9951.00
393_A566_L1.9861.00
125_K128_E1.9641.00
279_R312_K1.9501.00
362_D365_K1.9391.00
428_I437_I1.9331.00
604_T643_I1.9271.00
38_R83_N1.9161.00
43_N111_Q1.9021.00
33_P92_V1.8971.00
365_K394_L1.8961.00
605_A640_L1.8921.00
430_V503_L1.8801.00
157_R274_Y1.8791.00
44_K54_V1.8781.00
96_I242_F1.8661.00
157_R276_S1.8581.00
18_D247_K1.8551.00
370_D387_R1.8541.00
455_M493_F1.8511.00
434_K468_A1.8381.00
536_R539_S1.8381.00
270_I348_T1.8371.00
122_N125_K1.8351.00
504_K508_R1.8231.00
567_A673_A1.8031.00
431_K436_V1.8001.00
45_E48_E1.7891.00
38_R84_K1.7801.00
407_T570_R1.7791.00
370_D373_P1.7741.00
391_D395_S1.7721.00
186_S210_K1.7671.00
489_A591_I1.7441.00
47_A110_V1.7301.00
177_G249_I1.7231.00
463_T466_D1.7191.00
453_V469_Y1.7121.00
94_L238_A1.7121.00
46_D109_L1.7071.00
97_A103_A1.7041.00
404_N572_E1.6971.00
53_L244_V1.6921.00
396_R644_E1.6911.00
431_K434_K1.6901.00
27_A246_I1.6871.00
34_Y114_Y1.6811.00
361_A394_L1.6751.00
405_K570_R1.6541.00
275_S281_N1.6501.00
567_A581_H1.6381.00
576_I696_L1.6341.00
354_D679_E1.6211.00
171_N629_L1.6181.00
692_S695_D1.6171.00
565_D581_H1.6151.00
385_N388_G1.6121.00
596_V662_I1.6081.00
392_L396_R1.5971.00
172_P224_E1.5951.00
590_P647_I1.5931.00
50_R106_L1.5881.00
272_A352_I1.5811.00
587_P590_P1.5781.00
155_Q281_N1.5751.00
581_H604_T1.5741.00
365_K387_R1.5661.00
52_A97_A1.5631.00
437_I456_A1.5631.00
426_V496_V1.5611.00
589_T649_P1.5531.00
162_D267_K1.5511.00
435_I460_L1.5421.00
152_L271_H1.5331.00
596_V647_I1.5331.00
414_S563_A1.5311.00
269_K286_H1.5291.00
272_A280_V1.5271.00
94_L234_V1.5211.00
459_L657_Y1.5191.00
36_H84_K1.5071.00
149_F317_R1.5061.00
609_S635_P1.5031.00
17_V177_G1.5011.00
389_L564_C1.4981.00
387_R391_D1.4961.00
107_A110_V1.4891.00
22_Y25_K1.4801.00
428_I500_V1.4791.00
157_R355_D1.4741.00
84_K135_E1.4701.00
46_D49_R1.4571.00
580_K642_E1.4481.00
188_T212_V1.4341.00
350_D676_S1.4281.00
164_Y267_K1.4191.00
393_A564_C1.4131.00
55_L242_F1.4091.00
578_P608_I1.4001.00
457_S467_V1.4001.00
29_F248_W1.4001.00
607_G670_A1.3971.00
396_R646_N1.3951.00
105_D109_L1.3901.00
157_R275_S1.3881.00
149_F153_S1.3861.00
55_L238_A1.3831.00
158_H271_H1.3811.00
520_I527_F1.3781.00
452_A496_V1.3741.00
58_K83_N1.3741.00
151_K282_S1.3711.00
354_D680_D1.3711.00
22_Y179_I1.3691.00
152_L282_S1.3671.00
576_I678_I1.3641.00
498_G502_E1.3591.00
459_L497_S1.3541.00
18_D249_I1.3491.00
523_R528_I1.3431.00
25_K247_K1.3411.00
454_V592_D1.3381.00
157_R352_I1.3361.00
280_V313_I1.3331.00
148_E152_L1.3331.00
203_I211_V1.3331.00
151_K315_G1.3301.00
157_R356_L1.3271.00
207_L236_G1.3271.00
502_E505_A1.3231.00
333_F606_I1.3191.00
274_Y356_L1.3151.00
185_D210_K1.3131.00
277_D366_I1.3121.00
508_R520_I1.3041.00
582_V644_E1.2991.00
590_P596_V1.2981.00
204_Q211_V1.2921.00
451_S489_A1.2921.00
39_I42_I1.2901.00
427_K438_G1.2881.00
455_M489_A1.2821.00
39_I112_I1.2811.00
161_L351_A1.2761.00
14_G217_R1.2741.00
180_T235_L1.2691.00
238_A246_I1.2681.00
187_L236_G1.2631.00
148_E151_K1.2551.00
102_E106_L1.2531.00
346_E364_R1.2491.00
394_L400_F1.2491.00
180_T239_A1.2481.00
33_P114_Y1.2441.00
397_K582_V1.2311.00
92_V112_I1.2301.00
22_Y181_I1.2281.00
617_V626_T1.2271.00
161_L355_D1.2271.00
28_V107_A1.2251.00
31_R254_E1.2241.00
396_R584_Y1.2241.00
144_E317_R1.2211.00
574_G696_L1.2181.00
36_H118_E1.2181.00
571_I576_I1.2071.00
28_V104_T1.2031.00
393_A584_Y1.2031.00
494_G497_S1.2021.00
268_F344_A1.2011.00
600_V604_T1.1991.00
180_T189_I1.1981.00
8_D13_K1.1881.00
584_Y646_N1.1881.00
86_L90_Q1.1841.00
21_S25_K1.1811.00
4_I450_H1.1791.00
106_L109_L1.1791.00
405_K577_K1.1791.00
502_E506_R1.1781.00
28_V100_P1.1771.00
368_A390_L1.1761.00
356_L363_V1.1751.00
80_M234_V1.1721.00
274_Y363_V1.1700.99
567_A674_V1.1620.99
351_A687_N1.1610.99
52_A106_L1.1580.99
291_V298_G1.1540.99
686_I691_V1.1530.99
4_I453_V1.1530.99
343_W675_T1.1530.99
264_P290_D1.1520.99
569_V678_I1.1520.99
187_L209_V1.1470.99
453_V464_P1.1460.99
190_I214_K1.1460.99
149_F284_D1.1440.99
350_D360_K1.1420.99
144_E319_T1.1390.99
36_H326_N1.1370.99
288_W321_T1.1360.99
152_L158_H1.1360.99
221_S444_E1.1360.99
163_L348_T1.1340.99
567_A578_P1.1340.99
509_R517_D1.1340.99
171_N634_M1.1320.99
84_K117_L1.1310.99
521_D528_I1.1280.99
7_Y11_I1.1230.99
304_L318_Y1.1210.99
392_L584_Y1.1190.99
92_V114_Y1.1180.99
576_I612_L1.1160.99
395_S400_F1.1150.99
52_A103_A1.1120.99
37_A117_L1.1050.99
172_P255_H1.0970.99
511_A540_L1.0960.99
38_R117_L1.0960.99
389_L584_Y1.0960.99
123_I288_W1.0950.99
60_L237_F1.0950.99
183_T188_T1.0940.99
438_G470_E1.0930.99
28_V103_A1.0930.99
272_A283_L1.0910.99
24_G244_V1.0850.99
182_P240_L1.0840.99
450_H454_V1.0830.99
42_I112_I1.0830.99
505_A509_R1.0820.99
134_F324_A1.0750.99
57_G82_I1.0750.99
25_K179_I1.0750.99
454_V593_E1.0680.99
56_T80_M1.0680.99
405_K572_E1.0650.99
41_N111_Q1.0650.99
586_D650_T1.0620.99
508_R522_Y1.0600.99
127_L323_V1.0530.99
388_G392_L1.0520.99
150_G153_S1.0520.99
436_V470_E1.0520.99
402_L568_V1.0500.99
528_I534_K1.0470.99
260_N331_G1.0450.99
501_E505_A1.0450.99
55_L241_K1.0440.99
124_E164_Y1.0440.99
159_L355_D1.0420.99
273_Y281_N1.0390.99
50_R105_D1.0340.99
53_L102_E1.0320.99
156_G281_N1.0320.99
181_I188_T1.0300.99
691_V695_D1.0290.99
53_L96_I1.0290.99
182_P239_A1.0270.99
148_E284_D1.0270.99
178_A235_L1.0260.99
29_F94_L1.0230.99
288_W323_V1.0200.99
362_D400_F1.0190.99
361_A411_L1.0190.99
274_Y280_V1.0190.99
522_Y527_F1.0150.99
612_L674_V1.0150.99
516_N519_V1.0130.99
349_M363_V1.0110.99
85_A114_Y1.0100.99
192_N225_K1.0100.99
368_A387_R1.0100.99
459_L500_V1.0030.98
407_T568_V1.0020.98
95_V107_A1.0000.98
159_L274_Y1.0000.98
456_A500_V0.9980.98
273_Y282_S0.9980.98
27_A238_A0.9960.98
519_V529_G0.9920.98
55_L96_I0.9900.98
618_Y624_L0.9840.98
613_Y639_D0.9840.98
619_D623_N0.9760.98
608_I640_L0.9760.98
548_T551_L0.9730.98
140_N143_R0.9720.98
154_T281_N0.9720.98
151_K273_Y0.9720.98
183_T186_S0.9680.98
39_I92_V0.9670.98
628_N631_D0.9670.98
235_L248_W0.9650.98
170_G224_E0.9630.98
218_Q444_E0.9620.98
154_T275_S0.9610.98
54_V93_A0.9600.98
100_P104_T0.9570.98
93_A112_I0.9560.98
44_K110_V0.9560.98
128_E131_V0.9560.98
148_E282_S0.9550.98
507_L540_L0.9530.98
29_F91_P0.9490.98
437_I467_V0.9470.98
181_I239_A0.9460.98
57_G83_N0.9460.98
30_I112_I0.9380.98
159_L272_A0.9380.98
519_V530_E0.9360.98
583_V604_T0.9350.98
36_H119_G0.9320.97
37_A112_I0.9320.97
691_V696_L0.9290.97
90_Q294_S0.9290.97
607_G667_V0.9240.97
459_L504_K0.9230.97
169_S616_Y0.9230.97
103_A107_A0.9230.97
152_L284_D0.9190.97
569_V578_P0.9190.97
523_R526_Y0.9150.97
124_E162_D0.9150.97
597_K601_I0.9150.97
93_A110_V0.9140.97
8_D449_E0.9130.97
26_Y247_K0.9120.97
568_V580_K0.9120.97
209_V240_L0.9110.97
361_A390_L0.9070.97
429_K438_G0.9070.97
146_T151_K0.9060.97
390_L411_L0.9050.97
120_I126_A0.9040.97
350_D364_R0.9020.97
388_G648_V0.9020.97
194_Q221_S0.9020.97
265_E303_P0.9000.97
127_L288_W0.8990.97
148_E315_G0.8970.97
155_Q282_S0.8950.97
123_I267_K0.8940.97
374_Y380_Y0.8920.97
597_K647_I0.8910.97
388_G391_D0.8900.97
510_K540_L0.8880.97
129_N132_T0.8850.97
527_F540_L0.8850.97
152_L155_Q0.8810.96
436_V468_A0.8810.96
55_L237_F0.8810.96
187_L240_L0.8790.96
456_A467_V0.8790.96
615_H695_D0.8790.96
262_S265_E0.8770.96
311_Y346_E0.8770.96
399_I402_L0.8760.96
8_D217_R0.8750.96
441_F488_M0.8740.96
507_L537_I0.8710.96
182_P185_D0.8710.96
42_I110_V0.8710.96
253_N627_T0.8700.96
311_Y364_R0.8700.96
211_V236_G0.8670.96
37_A85_A0.8660.96
521_D530_E0.8630.96
406_N571_I0.8630.96
446_Q483_P0.8610.96
403_R680_D0.8580.96
45_E49_R0.8570.96
430_V435_I0.8560.96
271_H317_R0.8560.96
163_L687_N0.8550.96
498_G501_E0.8550.96
44_K56_T0.8540.96
587_P596_V0.8540.96
284_D319_T0.8510.96
30_I93_A0.8500.96
466_D525_G0.8490.96
466_D538_T0.8480.96
516_N529_G0.8470.96
424_E492_T0.8460.96
163_L351_A0.8450.96
226_F484_G0.8450.96
455_M591_I0.8440.95
265_E289_E0.8420.95
178_A231_Y0.8420.95
274_Y348_T0.8420.95
9_L16_Y0.8390.95
619_D625_L0.8380.95
624_L627_T0.8370.95
62_S66_E0.8350.95
407_T579_I0.8340.95
160_E284_D0.8320.95
451_S595_L0.8320.95
44_K47_A0.8310.95
462_I466_D0.8300.95
192_N218_Q0.8300.95
263_G340_P0.8280.95
629_L634_M0.8240.95
51_G106_L0.8240.95
413_L564_C0.8220.95
151_K281_N0.8210.95
411_L566_L0.8210.95
121_G622_A0.8200.95
238_A242_F0.8190.95
34_Y85_A0.8190.95
347_R675_T0.8180.95
428_I503_L0.8180.95
278_G358_I0.8180.95
526_Y536_R0.8170.95
679_E685_R0.8170.95
569_V576_I0.8170.95
572_E575_K0.8160.95
351_A685_R0.8160.95
59_D241_K0.8120.94
441_F448_N0.8110.94
158_H273_Y0.8110.94
58_K82_I0.8110.94
348_T352_I0.8110.94
187_L211_V0.8110.94
4_I464_P0.8100.94
281_N315_G0.8070.94
535_V540_L0.8050.94
148_E317_R0.8040.94
39_I114_Y0.8040.94
390_L413_L0.8020.94
581_H670_A0.8020.94
147_F315_G0.8020.94
176_Y255_H0.8010.94
435_I503_L0.8010.94
268_F285_V0.8010.94
343_W689_V0.7990.94
102_E105_D0.7990.94
454_V458_R0.7950.94
293_A326_N0.7910.94
676_S685_R0.7900.94
120_I326_N0.7890.94
655_T659_A0.7880.94
43_N47_A0.7880.94
17_V20_I0.7880.94
437_I496_V0.7870.93
139_T142_V0.7870.93
345_L348_T0.7870.93
616_Y624_L0.7850.93
163_L347_R0.7840.93
120_I132_T0.7830.93
22_Y190_I0.7820.93
458_R589_T0.7820.93
447_G595_L0.7820.93
343_W347_R0.7810.93
640_L643_I0.7810.93
97_A106_L0.7800.93
86_L294_S0.7800.93
48_E106_L0.7790.93
31_R258_A0.7790.93
250_E255_H0.7780.93
100_P251_T0.7780.93
451_S591_I0.7780.93
212_V475_T0.7780.93
505_A517_D0.7770.93
95_V110_V0.7760.93
185_D240_L0.7750.93
48_E58_K0.7740.93
428_I456_A0.7740.93
182_P187_L0.7730.93
193_Q199_V0.7730.93
104_T251_T0.7710.93
581_H643_I0.7700.93
308_T316_I0.7690.93
587_P662_I0.7680.93
500_V503_L0.7670.93
42_I92_V0.7670.93
175_P249_I0.7670.93
456_A459_L0.7670.93
122_N267_K0.7660.93
430_V537_I0.7660.93
394_L399_I0.7650.92
270_I344_A0.7640.92
36_H133_V0.7640.92
199_V203_I0.7610.92
273_Y284_D0.7600.92
428_I499_A0.7600.92
667_V671_A0.7600.92
118_E125_K0.7590.92
283_L313_I0.7580.92
504_K522_Y0.7580.92
207_L237_F0.7580.92
444_E483_P0.7560.92
35_A88_V0.7550.92
565_D669_I0.7550.92
430_V507_L0.7540.92
121_G125_K0.7540.92
292_G329_P0.7540.92
565_D670_A0.7540.92
26_Y100_P0.7530.92
303_P341_H0.7510.92
39_I85_A0.7500.92
151_K154_T0.7490.92
51_G98_N0.7470.92
291_V322_L0.7460.92
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282_S315_G0.7400.91
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432_N468_A0.7360.91
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348_T351_A0.7300.91
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34_Y92_V0.7200.90
391_D394_L0.7180.90
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200_S204_Q0.7170.90
42_I54_V0.7170.90
124_E288_W0.7160.90
368_A384_G0.7160.90
43_N46_D0.7160.90
385_N648_V0.7140.90
351_A355_D0.7130.90
242_F246_I0.7120.90
601_I645_V0.7110.89
35_A119_G0.7110.89
368_A413_L0.7110.89
168_S610_L0.7100.89
251_T254_E0.7080.89
508_R517_D0.7060.89
280_V363_V0.7040.89
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313_I316_I0.6390.84
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267_K288_W0.6290.83
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171_N616_Y0.6260.83
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11_I14_G0.6230.82
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383_S562_F0.6030.80
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214_K473_D0.6020.80
633_G636_T0.6020.80
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352_I355_D0.5800.78
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312_K370_D0.5770.77
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547_F550_T0.5670.76
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5_D217_R0.5670.76
192_N199_V0.5660.76
605_A608_I0.5660.76
371_T387_R0.5660.76
161_L348_T0.5660.76
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106_L110_V0.5660.76
231_Y250_E0.5640.76
685_R690_P0.5640.76
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563_A585_I0.5520.74
281_N363_V0.5520.74
439_L452_A0.5510.74
53_L242_F0.5510.74
20_I179_I0.5510.74
506_R510_K0.5510.74
393_A397_K0.5510.74
170_G261_G0.5500.74
543_E546_D0.5500.74
448_N483_P0.5500.74
336_A485_G0.5490.74
86_L133_V0.5490.74
15_N21_S0.5480.74
95_V103_A0.5470.73
529_G532_G0.5470.73
122_N323_V0.5460.73
203_I208_G0.5460.73
182_P211_V0.5450.73
156_G273_Y0.5450.73
363_V367_N0.5430.73
291_V330_A0.5430.73
355_D685_R0.5420.73
41_N46_D0.5420.73
94_L248_W0.5410.73
297_A300_P0.5400.72
397_K564_C0.5390.72
281_N314_G0.5390.72
402_L580_K0.5380.72
35_A121_G0.5380.72
149_F152_L0.5380.72
113_D116_P0.5370.72
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684_R696_L0.5370.72
399_I403_R0.5370.72
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626_T631_D0.5330.72
33_P85_A0.5320.71
607_G611_A0.5320.71
193_Q215_N0.5320.71
107_A111_Q0.5320.71
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585_I665_I0.5310.71
277_D281_N0.5310.71
428_I496_V0.5310.71
661_G666_P0.5300.71
152_L156_G0.5300.71
86_L324_A0.5300.71
5_D9_L0.5290.71
174_E225_K0.5290.71
417_P560_Y0.5280.71
444_E448_N0.5280.71
449_E471_I0.5280.71
426_V499_A0.5270.71
584_Y648_V0.5270.71
397_K409_V0.5270.71
368_A386_P0.5270.71
609_S613_Y0.5270.71
490_I654_S0.5270.71
388_G650_T0.5260.71
369_I381_Y0.5250.70
274_Y355_D0.5250.70
399_I409_V0.5240.70
169_S172_P0.5240.70
80_M92_V0.5240.70
480_S492_T0.5240.70
80_M91_P0.5240.70
353_A358_I0.5240.70
461_G522_Y0.5240.70
168_S333_F0.5240.70
159_L356_L0.5240.70
36_H85_A0.5230.70
171_N255_H0.5230.70
22_Y245_P0.5230.70
403_R409_V0.5220.70
394_L411_L0.5220.70
426_V439_L0.5220.70
359_S363_V0.5220.70
310_P413_L0.5220.70
142_V319_T0.5220.70
123_I323_V0.5210.70
470_E476_E0.5200.70
470_E477_L0.5200.70
192_N221_S0.5200.70
610_L689_V0.5200.70
270_I349_M0.5190.70
526_Y539_S0.5190.70
264_P330_A0.5190.70
613_Y634_M0.5190.70
35_A619_D0.5190.70
157_R363_V0.5190.70
38_R41_N0.5180.69
503_L507_L0.5170.69
32_S92_V0.5170.69
169_S261_G0.5170.69
383_S660_K0.5170.69
279_R362_D0.5160.69
528_I532_G0.5160.69
608_I613_Y0.5160.69
159_L348_T0.5160.69
308_T313_I0.5160.69
424_E491_Y0.5160.69
50_R54_V0.5160.69
119_G326_N0.5150.69
126_A130_K0.5150.69
204_Q209_V0.5140.69
133_V136_D0.5140.69
127_L131_V0.5130.69
563_A665_I0.5130.69
151_K158_H0.5130.69
601_I643_I0.5130.69
455_M657_Y0.5120.68
120_I128_E0.5120.68
148_E156_G0.5100.68
37_A116_P0.5090.68
189_I236_G0.5090.68
126_A133_V0.5080.68
272_A349_M0.5080.68
76_T295_R0.5070.68
304_L320_G0.5060.68
52_A95_V0.5060.68
394_L397_K0.5060.68
511_A520_I0.5050.67
268_F287_I0.5050.67
362_D394_L0.5040.67
519_V526_Y0.5040.67
97_A102_E0.5030.67
520_I529_G0.5020.67
443_P448_N0.5020.67
500_V504_K0.5020.67
178_A189_I0.5020.67
34_Y117_L0.5020.67
432_N466_D0.5020.67
356_L366_I0.5020.67
226_F297_A0.5020.67
50_R97_A0.5020.67
227_S296_D0.5010.67
418_S490_I0.5010.67
403_R411_L0.5010.67
171_N256_L0.5000.67
168_S606_I0.5000.67
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
1rm6A 2 0.9914 100 0.117 Contact Map
1t3qB 2 0.9971 100 0.119 Contact Map
1ffvB 2 0.9928 100 0.124 Contact Map
1n62B 2 0.9957 100 0.127 Contact Map
3uncA 2 0.9799 100 0.141 Contact Map
2w3sB 2 0.9857 100 0.141 Contact Map
3zyvA 3 0.9713 100 0.152 Contact Map
3nvzC 2 0.9799 100 0.154 Contact Map
4usaA 2 0.9613 100 0.162 Contact Map
1dgjA 1 0.9599 100 0.165 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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