Q7LX83 - SULSO - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

Q7LX83 - Metabolite permease, putative

UniProt:	Q7LX83	Sequences: MDGLHVSIVSVALFIILFVIFVFLGFYGSRWRRGDLSKLHEWALAGRRLGPYLMWFLLTADLYTAYTFIAVPSLVLASGPVGFFAAFYSAVTPFIALLFMPRLWTIAKNRGYVTAADFIKDRFNSRILAGLVAITGVVAELPYIALQIVGMQVALLILLLGLGVSNITLASDLSLLVAFIILAAFVFTSGLRGAALTAVYKDIIILGTIISIAIYVPLAFGGFSGAFHNAQTLSSQINLALNNVNKPIFYNYLPNTLAARTAYISLAIGSAFALYLYPHAVNASVSSDSKKSLKLSLALQPFYSIILAVIALFGILVYANSKVVNFIAKTHSGAVAVPALIGYSMPDWFVGIALLGIFIGGLVPAAIMAIGAANLLTRNIIKEFKPNMSPSTESALAKWISTAFKFLALALVFATPSTYAIQLQLLGGIIILQTLPSVFLGLYTSKLNGYALVGGWAGGMFSGIYLTLLANHFGPLKTSSFITPLGPMYIGVLSTLINLAIGLIGTAIAYGAGWRPVSNIRAEEIA	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	526 (460)
Sequences:	11669 (7377)
Seq/√Len:	343.9

ECOLI - ACTP PANF YIDK PUTP
BACSU - YWCA YHJB OPUE YODF YCGO
HALSA - Q9HP63 Q9HR16
SULSO - Q7LX83 Q97VX6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
458_G	501_I	5.780	1.00
389_S	392_T	4.147	1.00
447_L	502_G	3.858	1.00
289_S	292_S	3.810	1.00
458_G	497_I	3.472	1.00
23_F	27_Y	3.442	1.00
503_L	507_A	3.254	1.00
183_A	405_K	3.245	1.00
214_I	218_L	3.230	1.00
381_I	388_M	3.225	1.00
225_G	228_H	3.100	1.00
455_G	502_G	3.091	1.00
448_N	509_A	3.037	1.00
454_G	505_G	3.026	1.00
501_I	505_G	3.017	1.00
385_K	392_T	2.975	1.00
505_G	509_A	2.935	1.00
462_S	497_I	2.930	1.00
450_Y	509_A	2.848	1.00
391_S	395_A	2.821	1.00
395_A	399_W	2.753	1.00
216_V	316_L	2.712	1.00
120_K	129_A	2.621	1.00
170_A	173_L	2.607	1.00
440_L	502_G	2.600	1.00
451_A	506_T	2.580	1.00
179_F	409_L	2.485	1.00
16_I	20_I	2.375	1.00
399_W	403_A	2.352	1.00
17_L	21_F	2.344	1.00
40_H	47_R	2.344	1.00
49_L	195_A	2.330	1.00
191_L	286_S	2.311	1.00
288_D	292_S	2.304	1.00
454_G	501_I	2.181	1.00
317_V	336_A	2.181	1.00
225_G	229_N	2.160	1.00
228_H	232_T	2.145	1.00
450_Y	454_G	2.110	1.00
41_E	46_G	2.100	1.00
19_V	23_F	2.078	1.00
388_M	392_T	2.078	1.00
448_N	451_A	2.055	1.00
385_K	388_M	2.031	1.00
176_L	180_I	2.019	1.00
120_K	126_R	2.018	1.00
127_I	453_V	2.011	1.00
444_T	447_L	1.999	1.00
118_F	441_G	1.986	1.00
437_S	452_L	1.977	1.00
210_I	214_I	1.967	1.00
381_I	385_K	1.965	1.00
73_S	334_A	1.944	1.00
500_A	504_I	1.920	1.00
123_F	447_L	1.912	1.00
378_R	382_K	1.907	1.00
65_A	150_G	1.901	1.00
82_G	85_A	1.885	1.00
461_F	465_Y	1.879	1.00
406_F	410_A	1.871	1.00
292_S	295_L	1.860	1.00
231_Q	234_S	1.859	1.00
291_K	295_L	1.850	1.00
124_N	127_I	1.845	1.00
339_A	343_Y	1.840	1.00
228_H	231_Q	1.840	1.00
448_N	506_T	1.834	1.00
208_T	356_G	1.824	1.00
446_K	507_A	1.818	1.00
381_I	396_L	1.812	1.00
444_T	507_A	1.797	1.00
112_Y	121_D	1.796	1.00
440_L	499_L	1.790	1.00
182_L	365_A	1.782	1.00
53_L	199_V	1.776	1.00
24_L	200_Y	1.754	1.00
451_A	455_G	1.752	1.00
451_A	505_G	1.750	1.00
382_K	393_E	1.749	1.00
224_S	228_H	1.747	1.00
291_K	294_K	1.715	1.00
395_A	398_K	1.707	1.00
321_S	343_Y	1.692	1.00
44_L	47_R	1.677	1.00
392_T	395_A	1.676	1.00
189_S	193_G	1.659	1.00
51_P	292_S	1.605	1.00
376_L	400_I	1.592	1.00
444_T	503_L	1.588	1.00
376_L	380_I	1.576	1.00
56_F	199_V	1.572	1.00
351_G	355_L	1.567	1.00
229_N	232_T	1.560	1.00
180_I	184_A	1.538	1.00
172_D	413_F	1.534	1.00
369_A	405_K	1.523	1.00
454_G	458_G	1.518	1.00
99_F	439_F	1.509	1.00
11_V	15_I	1.505	1.00
381_I	392_T	1.501	1.00
446_K	510_Y	1.500	1.00
21_F	25_G	1.498	1.00
458_G	462_S	1.498	1.00
388_M	393_E	1.478	1.00
496_L	500_A	1.453	1.00
124_N	449_G	1.447	1.00
117_D	379_N	1.433	1.00
328_A	331_H	1.429	1.00
54_M	287_S	1.419	1.00
152_Q	175_L	1.417	1.00
135_T	460_M	1.394	1.00
227_F	231_Q	1.393	1.00
372_A	404_F	1.384	1.00
126_R	130_G	1.384	1.00
20_I	24_L	1.378	1.00
175_L	409_L	1.366	1.00
15_I	19_V	1.348	1.00
448_N	510_Y	1.341	1.00
117_D	378_R	1.335	1.00
173_L	176_L	1.330	1.00
465_Y	469_L	1.318	1.00
446_K	511_G	1.305	1.00
497_I	501_I	1.303	1.00
223_F	227_F	1.302	1.00
122_R	441_G	1.301	1.00
179_F	405_K	1.288	1.00
43_A	397_A	1.287	1.00
182_L	362_L	1.287	1.00
198_A	283_A	1.283	1.00
173_L	177_V	1.273	1.00
38_K	41_E	1.272	1.00
22_V	25_G	1.270	1.00
126_R	383_E	1.267	1.00
153_V	332_S	1.259	1.00
134_I	138_V	1.250	1.00
114_T	374_N	1.248	1.00
197_T	366_A	1.242	1.00
462_S	501_I	1.240	1.00
376_L	381_I	1.236	1.00
493_L	496_L	1.231	1.00
224_S	227_F	1.231	1.00
221_G	225_G	1.227	1.00
132_V	456_W	1.225	1.00
496_L	499_L	1.221	1.00
12_A	16_I	1.220	1.00
172_D	176_L	1.219	1.00
10_S	348_W	1.213	1.00
220_F	226_A	1.213	1.00
21_F	200_Y	1.212	1.00
392_T	396_L	1.211	1.00
169_L	174_S	1.210	1.00
61_D	367_I	1.208	1.00
120_K	383_E	1.201	1.00
55_W	299_L	1.195	1.00
151_M	178_A	1.195	1.00
410_A	414_A	1.189	1.00
128_L	453_V	1.189	1.00
222_G	225_G	1.179	1.00
394_S	398_K	1.175	1.00
148_I	179_F	1.162	1.00
260_R	263_Y	1.159	1.00
17_L	25_G	1.157	1.00
377_T	396_L	1.155	1.00
499_L	503_L	1.145	1.00
450_Y	505_G	1.143	1.00
131_L	453_V	1.143	1.00
134_I	380_I	1.141	1.00
57_L	367_I	1.140	1.00
338_P	341_I	1.136	1.00
109_N	290_K	1.128	1.00
215_Y	219_A	1.121	1.00
45_A	191_L	1.120	1.00
455_G	498_N	1.119	1.00
422_Q	426_L	1.118	1.00
156_L	171_S	1.118	1.00
118_F	122_R	1.115	1.00
377_T	397_A	1.114	1.00
59_T	303_Y	1.113	1.00
203_I	207_G	1.112	1.00
176_L	409_L	1.112	1.00
388_M	396_L	1.109	1.00
397_A	401_S	1.106	1.00
390_P	393_E	1.101	1.00
449_G	453_V	1.100	1.00
198_A	366_A	1.097	1.00
234_S	237_I	1.095	1.00
229_N	233_L	1.094	1.00
129_A	379_N	1.091	1.00
176_L	413_F	1.091	1.00
128_L	452_L	1.089	1.00
448_N	505_G	1.086	1.00
326_F	330_T	1.082	1.00
207_G	211_S	1.073	1.00
144_I	408_A	1.071	1.00
20_I	200_Y	1.069	1.00
341_I	353_A	1.060	1.00
446_K	512_A	1.057	1.00
87_F	91_V	1.056	1.00
185_F	366_A	1.053	1.00
437_S	456_W	1.048	1.00
81_V	84_F	1.046	1.00
254_P	257_L	1.044	1.00
396_L	400_I	1.043	1.00
339_A	342_G	1.039	1.00
219_A	320_N	1.037	1.00
491_G	495_T	1.035	1.00
12_A	15_I	1.028	1.00
483_T	486_G	1.028	1.00
101_P	294_K	1.026	1.00
45_A	49_L	1.024	1.00
187_F	402_T	1.022	1.00
148_I	175_L	1.017	1.00
455_G	459_G	1.014	1.00
332_S	335_V	1.013	1.00
433_Q	498_N	1.010	1.00
201_K	366_A	1.010	1.00
447_L	451_A	1.009	1.00
185_F	362_L	1.008	1.00
211_S	349_F	1.005	1.00
57_L	60_A	1.001	1.00
501_I	504_I	1.001	1.00
26_F	30_R	0.999	1.00
75_V	82_G	0.998	1.00
110_R	121_D	0.997	1.00
40_H	111_G	0.997	1.00
457_A	461_F	0.996	1.00
229_N	319_A	0.995	1.00
51_P	55_W	0.994	1.00
400_I	403_A	0.993	1.00
20_I	23_F	0.988	1.00
450_Y	508_I	0.987	1.00
441_G	452_L	0.985	1.00
211_S	215_Y	0.985	1.00
101_P	290_K	0.980	1.00
130_G	384_F	0.977	1.00
123_F	441_G	0.974	1.00
127_I	449_G	0.974	1.00
314_G	318_Y	0.971	1.00
127_I	131_L	0.968	1.00
17_L	362_L	0.963	1.00
119_I	132_V	0.962	1.00
504_I	507_A	0.959	1.00
262_A	266_L	0.958	1.00
373_A	377_T	0.958	1.00
36_L	41_E	0.956	1.00
447_L	506_T	0.955	1.00
43_A	374_N	0.951	1.00
131_L	456_W	0.947	1.00
22_V	26_F	0.947	1.00
182_L	366_A	0.944	1.00
227_F	230_A	0.941	1.00
341_I	350_V	0.941	1.00
316_L	320_N	0.938	1.00
376_L	404_F	0.934	1.00
145_A	411_L	0.933	1.00
198_A	367_I	0.929	1.00
218_L	223_F	0.928	1.00
403_A	407_L	0.926	1.00
74_L	78_S	0.924	1.00
77_A	333_G	0.924	1.00
440_L	447_L	0.924	1.00
217_P	222_G	0.922	1.00
18_F	21_F	0.920	1.00
440_L	503_L	0.917	1.00
23_F	26_F	0.916	1.00
51_P	295_L	0.915	1.00
226_A	229_N	0.915	1.00
490_I	494_S	0.913	1.00
260_R	265_S	0.907	1.00
370_I	373_A	0.907	1.00
61_D	198_A	0.899	1.00
163_G	170_A	0.898	1.00
94_F	98_L	0.897	1.00
287_S	293_L	0.894	1.00
162_L	169_L	0.893	1.00
53_L	195_A	0.891	1.00
436_P	499_L	0.889	1.00
137_V	376_L	0.887	1.00
119_I	128_L	0.885	1.00
93_P	97_L	0.885	1.00
424_Q	428_G	0.884	1.00
135_T	456_W	0.882	1.00
459_G	463_G	0.881	1.00
45_A	286_S	0.880	1.00
219_A	344_S	0.879	1.00
65_A	361_G	0.877	1.00
423_L	427_G	0.869	1.00
92_T	96_A	0.869	1.00
327_I	330_T	0.865	1.00
56_F	202_D	0.864	1.00
156_L	163_G	0.862	1.00
60_A	283_A	0.861	1.00
197_T	201_K	0.860	1.00
226_A	230_A	0.859	1.00
25_G	29_S	0.859	1.00
498_N	502_G	0.858	1.00
21_F	29_S	0.856	1.00
466_L	493_L	0.853	1.00
212_I	216_V	0.852	1.00
503_L	506_T	0.848	1.00
298_A	302_F	0.847	1.00
453_V	457_A	0.845	1.00
57_L	195_A	0.844	1.00
499_L	502_G	0.843	1.00
437_S	498_N	0.842	1.00
169_L	177_V	0.840	1.00
465_Y	468_L	0.839	1.00
253_L	256_T	0.835	1.00
75_V	315_I	0.835	1.00
406_F	409_L	0.834	1.00
194_A	197_T	0.834	1.00
363_V	366_A	0.834	1.00
50_G	292_S	0.829	1.00
444_T	448_N	0.829	1.00
143_Y	278_P	0.828	1.00
330_T	333_G	0.826	1.00
22_V	29_S	0.826	1.00
57_L	283_A	0.825	1.00
224_S	229_N	0.820	1.00
510_Y	513_G	0.819	1.00
335_V	339_A	0.817	1.00
175_L	412_V	0.816	1.00
497_I	500_A	0.815	1.00
201_K	359_I	0.814	1.00
36_L	394_S	0.814	1.00
123_F	502_G	0.812	1.00
451_A	454_G	0.811	1.00
27_Y	196_L	0.811	1.00
185_F	363_V	0.811	1.00
420_A	424_Q	0.811	1.00
230_A	234_S	0.811	1.00
444_T	506_T	0.809	1.00
315_I	318_Y	0.809	1.00
27_Y	30_R	0.808	1.00
489_Y	493_L	0.807	1.00
459_G	498_N	0.804	1.00
122_R	444_T	0.804	1.00
17_L	359_I	0.803	1.00
307_L	310_I	0.799	1.00
401_S	405_K	0.795	1.00
124_N	513_G	0.784	1.00
152_Q	171_S	0.784	1.00
253_L	257_L	0.783	1.00
64_T	143_Y	0.782	1.00
424_Q	431_I	0.781	1.00
18_F	22_V	0.781	1.00
209_I	310_I	0.780	1.00
504_I	508_I	0.779	1.00
116_A	132_V	0.779	1.00
233_L	318_Y	0.778	1.00
185_F	201_K	0.777	1.00
258_A	261_T	0.775	1.00
174_S	178_A	0.775	1.00
450_Y	510_Y	0.774	1.00
462_S	466_L	0.772	1.00
494_S	498_N	0.769	1.00
313_F	340_L	0.769	1.00
220_F	319_A	0.768	1.00
100_M	293_L	0.768	1.00
212_I	337_V	0.768	1.00
21_F	28_G	0.767	1.00
14_F	18_F	0.766	1.00
39_L	43_A	0.766	1.00
26_F	188_T	0.764	1.00
399_W	402_T	0.763	1.00
97_L	298_A	0.762	1.00
317_V	321_S	0.762	1.00
51_P	299_L	0.761	1.00
196_L	199_V	0.761	1.00
233_L	236_Q	0.760	1.00
376_L	396_L	0.759	1.00
462_S	465_Y	0.757	1.00
382_K	390_P	0.755	1.00
315_I	319_A	0.755	1.00
194_A	367_I	0.754	1.00
216_V	219_A	0.754	1.00
171_S	175_L	0.753	1.00
215_Y	218_L	0.752	1.00
80_P	315_I	0.751	1.00
409_L	413_F	0.748	1.00
458_G	505_G	0.747	1.00
326_F	329_K	0.745	1.00
22_V	184_A	0.745	1.00
393_E	397_A	0.744	1.00
16_I	23_F	0.743	1.00
153_V	156_L	0.740	1.00
68_F	353_A	0.739	0.99
102_R	443_Y	0.736	0.99
335_V	338_P	0.736	0.99
201_K	362_L	0.735	0.99
127_I	130_G	0.734	0.99
460_M	464_I	0.732	0.99
57_L	61_D	0.731	0.99
89_S	304_S	0.730	0.99
30_R	35_D	0.729	0.99
89_S	301_P	0.727	0.99
500_A	503_L	0.725	0.99
423_L	431_I	0.723	0.99
263_Y	266_L	0.723	0.99
10_S	350_V	0.722	0.99
12_A	19_V	0.721	0.99
426_L	429_I	0.721	0.99
10_S	13_L	0.720	0.99
130_G	133_A	0.720	0.99
452_L	459_G	0.719	0.99
448_N	511_G	0.719	0.99
201_K	363_V	0.717	0.99
14_F	358_F	0.717	0.99
444_T	451_A	0.716	0.99
151_M	361_G	0.712	0.99
117_D	121_D	0.709	0.99
186_V	366_A	0.708	0.99
26_F	29_S	0.707	0.99
440_L	444_T	0.705	0.99
21_F	26_F	0.704	0.99
425_L	467_T	0.704	0.99
137_V	372_A	0.703	0.99
83_F	86_A	0.703	0.99
377_T	393_E	0.701	0.99
123_F	440_L	0.700	0.99
381_I	386_P	0.700	0.99
345_M	349_F	0.699	0.99
495_T	499_L	0.699	0.99
76_L	330_T	0.698	0.99
68_F	209_I	0.698	0.99
126_R	129_A	0.698	0.99
348_W	352_I	0.698	0.99
484_P	487_P	0.698	0.99
505_G	508_I	0.698	0.99
382_K	386_P	0.697	0.99
64_T	68_F	0.696	0.99
147_Q	364_P	0.696	0.99
446_K	449_G	0.694	0.99
287_S	292_S	0.693	0.99
49_L	54_M	0.692	0.99
258_A	262_A	0.689	0.99
185_F	193_G	0.688	0.99
364_P	368_M	0.688	0.99
206_L	210_I	0.687	0.99
37_S	41_E	0.687	0.99
495_T	498_N	0.686	0.99
130_G	134_I	0.685	0.99
91_V	95_I	0.685	0.99
492_V	496_L	0.684	0.99
485_L	493_L	0.684	0.99
508_I	511_G	0.682	0.99
459_G	462_S	0.680	0.99
149_V	153_V	0.680	0.99
423_L	430_I	0.680	0.99
417_S	421_I	0.680	0.99
310_I	313_F	0.679	0.99
231_Q	237_I	0.678	0.99
226_A	316_L	0.677	0.99
462_S	494_S	0.676	0.99
13_L	351_G	0.675	0.99
373_A	400_I	0.675	0.99
312_L	316_L	0.675	0.99
52_Y	199_V	0.674	0.99
217_P	223_F	0.671	0.99
25_G	28_G	0.667	0.99
183_A	402_T	0.666	0.99
24_L	28_G	0.666	0.99
153_V	334_A	0.666	0.99
104_W	290_K	0.665	0.99
454_G	457_A	0.662	0.99
131_L	457_A	0.661	0.99
340_L	344_S	0.661	0.99
509_A	512_A	0.660	0.99
201_K	364_P	0.660	0.99
29_S	188_T	0.658	0.99
114_T	379_N	0.657	0.99
13_L	348_W	0.657	0.99
482_I	486_G	0.656	0.99
191_L	195_A	0.654	0.99
317_V	340_L	0.654	0.99
368_M	371_G	0.652	0.99
260_R	264_I	0.652	0.99
147_Q	365_A	0.650	0.99
116_A	136_G	0.650	0.99
230_A	233_L	0.648	0.99
52_Y	56_F	0.647	0.99
409_L	412_V	0.647	0.99
373_A	401_S	0.645	0.99
155_L	174_S	0.645	0.99
410_A	413_F	0.642	0.99
308_A	314_G	0.642	0.99
28_G	196_L	0.641	0.99
50_G	53_L	0.640	0.99
153_V	157_I	0.639	0.99
261_T	265_S	0.638	0.99
67_T	307_L	0.636	0.98
270_S	274_L	0.634	0.98
87_F	90_A	0.634	0.98
427_G	430_I	0.633	0.98
10_S	351_G	0.633	0.98
220_F	225_G	0.632	0.98
464_I	468_L	0.632	0.98
192_R	196_L	0.627	0.98
232_T	236_Q	0.627	0.98
211_S	214_I	0.627	0.98
207_G	210_I	0.625	0.98
234_S	318_Y	0.624	0.98
90_A	268_I	0.623	0.98
313_F	317_V	0.623	0.98
59_T	202_D	0.622	0.98
113_V	117_D	0.621	0.98
347_D	350_V	0.620	0.98
119_I	437_S	0.619	0.98
249_F	253_L	0.619	0.98
456_W	459_G	0.619	0.98
60_A	201_K	0.617	0.98
136_G	375_L	0.616	0.98
485_L	488_M	0.615	0.98
148_I	193_G	0.615	0.98
467_T	490_I	0.614	0.98
74_L	77_A	0.613	0.98
381_I	384_F	0.611	0.98
42_W	398_K	0.610	0.98
284_S	297_L	0.610	0.98
313_F	316_L	0.608	0.98
124_N	128_L	0.607	0.98
223_F	226_A	0.606	0.98
362_L	366_A	0.606	0.98
53_L	196_L	0.605	0.98
272_F	435_L	0.604	0.98
213_A	309_V	0.603	0.98
295_L	299_L	0.602	0.98
35_D	41_E	0.599	0.98
223_F	229_N	0.599	0.98
217_P	226_A	0.599	0.98
311_A	315_I	0.599	0.98
57_L	198_A	0.597	0.98
54_M	57_L	0.597	0.98
461_F	464_I	0.596	0.98
123_F	452_L	0.595	0.98
233_L	237_I	0.594	0.98
143_Y	368_M	0.593	0.98
220_F	320_N	0.592	0.98
436_P	502_G	0.590	0.98
39_L	393_E	0.589	0.98
407_L	410_A	0.589	0.98
71_V	75_V	0.588	0.98
256_T	259_A	0.588	0.98
304_S	308_A	0.588	0.98
55_W	59_T	0.588	0.98
144_I	365_A	0.587	0.97
279_H	282_N	0.587	0.97
210_I	213_A	0.587	0.97
113_V	378_R	0.586	0.97
169_L	173_L	0.586	0.97
93_P	298_A	0.586	0.97
373_A	397_A	0.586	0.97
136_G	434_T	0.585	0.97
92_T	99_F	0.585	0.97
17_L	201_K	0.585	0.97
176_L	179_F	0.583	0.97
198_A	363_V	0.582	0.97
183_A	187_F	0.580	0.97
446_K	506_T	0.580	0.97
283_A	367_I	0.579	0.97
128_L	449_G	0.579	0.97
447_L	452_L	0.577	0.97
212_I	353_A	0.577	0.97
195_A	198_A	0.574	0.97
42_W	401_S	0.572	0.97
507_A	510_Y	0.572	0.97
60_A	202_D	0.572	0.97
141_L	407_L	0.572	0.97
424_Q	427_G	0.572	0.97
61_D	279_H	0.571	0.97
290_K	294_K	0.571	0.97
295_L	298_A	0.571	0.97
435_L	439_F	0.570	0.97
147_Q	150_G	0.570	0.97
258_A	265_S	0.569	0.97
41_E	192_R	0.568	0.97
157_I	335_V	0.568	0.97
129_A	383_E	0.565	0.97
423_L	428_G	0.565	0.97
446_K	450_Y	0.564	0.97
175_L	179_F	0.564	0.97
230_A	236_Q	0.562	0.97
329_K	332_S	0.559	0.97
425_L	429_I	0.557	0.97
307_L	311_A	0.557	0.97
296_S	300_Q	0.556	0.97
176_L	406_F	0.556	0.97
487_P	490_I	0.556	0.97
132_V	434_T	0.554	0.96
97_L	294_K	0.554	0.96
91_V	96_A	0.554	0.96
115_A	438_V	0.553	0.96
349_F	352_I	0.553	0.96
179_F	412_V	0.552	0.96
377_T	400_I	0.552	0.96
433_Q	460_M	0.552	0.96
447_L	455_G	0.551	0.96
463_G	494_S	0.551	0.96
56_F	303_Y	0.550	0.96
156_L	170_A	0.549	0.96
259_A	262_A	0.548	0.96
288_D	291_K	0.548	0.96
377_T	381_I	0.547	0.96
17_L	30_R	0.546	0.96
298_A	301_P	0.546	0.96
346_P	349_F	0.545	0.96
402_T	406_F	0.545	0.96
149_V	171_S	0.545	0.96
408_A	412_V	0.544	0.96
450_Y	453_V	0.542	0.96
92_T	95_I	0.542	0.96
218_L	222_G	0.541	0.96
98_L	101_P	0.540	0.96
38_K	46_G	0.540	0.96
213_A	312_L	0.540	0.96
448_N	452_L	0.539	0.96
229_N	234_S	0.538	0.96
70_A	143_Y	0.537	0.96
345_M	353_A	0.536	0.96
63_Y	300_Q	0.536	0.96
122_R	445_S	0.535	0.96
103_L	281_V	0.535	0.96
68_F	73_S	0.535	0.96
148_I	408_A	0.534	0.96
132_V	136_G	0.534	0.96
259_A	263_Y	0.534	0.96
486_G	489_Y	0.533	0.96
13_L	355_L	0.533	0.96
157_I	338_P	0.532	0.96
489_Y	494_S	0.531	0.95
157_I	339_A	0.531	0.95
263_Y	270_S	0.531	0.95
102_R	109_N	0.531	0.95
489_Y	492_V	0.531	0.95
226_A	319_A	0.529	0.95
40_H	390_P	0.529	0.95
220_F	229_N	0.528	0.95
209_I	309_V	0.528	0.95
126_R	384_F	0.527	0.95
222_G	229_N	0.526	0.95
39_L	42_W	0.525	0.95
141_L	411_L	0.524	0.95
386_P	389_S	0.522	0.95
35_D	192_R	0.522	0.95
144_I	404_F	0.522	0.95
59_T	63_Y	0.521	0.95
49_L	93_P	0.521	0.95
62_L	428_G	0.521	0.95
393_E	396_L	0.520	0.95
225_G	319_A	0.520	0.95
330_T	335_V	0.520	0.95
381_I	393_E	0.520	0.95
61_D	186_V	0.519	0.95
466_L	490_I	0.518	0.95
61_D	283_A	0.517	0.95
458_G	461_F	0.517	0.95
49_L	286_S	0.517	0.95
185_F	189_S	0.516	0.95
39_L	390_P	0.516	0.95
226_A	233_L	0.516	0.95
265_S	278_P	0.516	0.95
313_F	337_V	0.515	0.95
483_T	487_P	0.515	0.95
99_F	276_L	0.515	0.95
248_I	253_L	0.515	0.95
76_L	336_A	0.514	0.95
219_A	223_F	0.513	0.95
73_S	333_G	0.512	0.95
446_K	503_L	0.511	0.94
143_Y	147_Q	0.510	0.94
66_Y	150_G	0.509	0.94
310_I	315_I	0.508	0.94
342_G	350_V	0.507	0.94
194_A	370_I	0.506	0.94
76_L	318_Y	0.506	0.94
490_I	493_L	0.505	0.94
265_S	489_Y	0.505	0.94
333_G	336_A	0.504	0.94
139_A	430_I	0.504	0.94
451_A	501_I	0.503	0.94
230_A	318_Y	0.503	0.94
221_G	226_A	0.503	0.94
452_L	455_G	0.502	0.94
488_M	491_G	0.502	0.94
69_I	150_G	0.501	0.94
147_Q	368_M	0.500	0.94
391_S	399_W	0.500	0.94
72_P	354_L	0.500	0.94
398_K	401_S	0.500	0.94
173_L	180_I	0.500	0.94

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2xq2A	2	0.8802	100	0.274	Contact Map
3dh4A	3	0.8441	100	0.318	Contact Map
3l1lA	2	0.7814	99.3	0.864	Contact Map
3giaA	1	0.8004	99	0.88	Contact Map
4wgvA	2	0.6996	98.9	0.886	Contact Map
4djkA	2	0.7852	98.8	0.89	Contact Map
2jlnA	1	0.8099	98.5	0.9	Contact Map
4c7rA	3	0.8441	97.2	0.925	Contact Map
2wswA	3	0.7928	97	0.928	Contact Map
4us3A	1	0.7529	95.3	0.938	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0132 seconds.