HISX - SULSO - GREMLIN Contacts

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HISX - Histidinol dehydrogenase

UniProt:	O33775	Sequences: MISYSLPNERPNDFSRVIPVVKDIIESVKTKGDNALYELTEKLDKVKIDNIKAREEELKTQASKLDPKVKQAIDTAYEQLKAFHEMLVPPNIGGGYQGISFGVIWRSIEKIGIYVPSGKYSYPSTLLMAGIPAKVAKVKEIYVASPPTQEGTVNPALAYVAIKLGVNEVYKIGGAQAIAALAFGTESVKKVYKIVGPGNVYVQAAKYLVSSVVGIDGIEGPTELVIIADETAKAEYVALDMKAQAEHGPDTYIVLLSNDDELIRRVEEKIKNDKKIYYIIKTKNLDEAIEIANKIAPEHLSLYVKDAYTLMDKIVNAGAISLGNTPPAIIDYVAGPNHILPTNGWAKIRGGITVYDFIKPTMYANVRDINKQLLEASISLANYEGFIIHGKSIGARYE	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	398 (389)
Sequences:	3747 (2064)
Seq/√Len:	104.7

ECOLI - HISX
BACSU - HISX
HALSA - HISX
SULSO - HISX

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
27_S	31_K	4.069	1.00
41_E	47_K	4.041	1.00
31_K	38_E	3.514	1.00
52_K	168_E	3.261	1.00
119_K	249_P	3.161	1.00
110_K	140_E	3.135	1.00
25_I	179_A	3.114	1.00
144_A	181_L	3.026	1.00
235_E	269_K	2.917	1.00
306_D	309_T	2.805	1.00
80_L	127_L	2.774	1.00
227_I	292_A	2.773	1.00
81_K	85_E	2.713	1.00
113_I	130_G	2.690	1.00
308_Y	365_N	2.542	1.00
286_D	313_K	2.500	1.00
64_K	155_P	2.492	1.00
75_T	376_A	2.482	1.00
140_E	168_E	2.480	1.00
260_D	264_R	2.460	1.00
27_S	39_L	2.434	1.00
283_K	287_E	2.386	1.00
109_E	315_V	2.311	1.00
269_K	272_N	2.306	1.00
382_N	394_G	2.297	1.00
62_A	162_I	2.278	1.00
282_T	288_A	2.194	1.00
134_K	167_N	2.190	1.00
74_D	163_K	2.159	1.00
58_L	169_V	2.100	1.00
263_I	279_I	2.079	1.00
33_D	185_T	2.049	1.00
38_E	42_K	2.049	1.00
263_I	281_K	2.048	1.00
374_L	397_Y	2.047	1.00
77_Y	81_K	2.046	1.00
204_A	208_L	2.031	1.00
382_N	387_I	2.024	1.00
230_E	259_D	2.009	1.00
248_G	251_T	1.980	1.00
225_V	292_A	1.978	1.00
378_I	394_G	1.977	1.00
77_Y	131_I	1.956	1.00
130_G	166_V	1.952	1.00
192_Y	347_K	1.945	1.00
139_K	315_V	1.929	1.00
27_S	38_E	1.925	1.00
31_K	34_N	1.924	1.00
23_D	27_S	1.911	1.00
20_V	201_Y	1.904	1.00
289_I	314_I	1.897	1.00
59_K	63_S	1.883	1.00
26_E	30_T	1.874	1.00
227_I	288_A	1.863	1.00
267_E	279_I	1.854	1.00
59_K	162_I	1.847	1.00
224_L	243_A	1.800	1.00
391_K	394_G	1.792	1.00
109_E	316_N	1.769	1.00
261_E	265_R	1.768	1.00
257_S	263_I	1.750	1.00
328_A	392_S	1.723	1.00
81_K	134_K	1.714	1.00
231_T	305_K	1.711	1.00
109_E	139_K	1.703	1.00
70_K	74_D	1.684	1.00
22_K	208_L	1.659	1.00
289_I	310_L	1.656	1.00
183_F	212_V	1.652	1.00
329_I	377_S	1.632	1.00
52_K	170_Y	1.632	1.00
108_I	193_K	1.628	1.00
230_E	258_N	1.624	1.00
54_R	57_E	1.620	1.00
57_E	171_K	1.615	1.00
239_L	273_D	1.603	1.00
37_Y	51_I	1.587	1.00
143_V	161_A	1.585	1.00
284_N	287_E	1.569	1.00
55_E	59_K	1.569	1.00
302_L	314_I	1.561	1.00
307_A	322_L	1.530	1.00
258_N	282_T	1.506	1.00
70_K	159_Y	1.505	1.00
106_R	361_T	1.504	1.00
203_Q	218_I	1.491	1.00
33_D	187_S	1.475	1.00
69_V	383_Y	1.473	1.00
269_K	273_D	1.459	1.00
60_T	64_K	1.444	1.00
93_G	100_S	1.429	1.00
255_L	266_V	1.426	1.00
378_I	382_N	1.426	1.00
172_I	188_V	1.406	1.00
62_A	159_Y	1.398	1.00
112_G	181_L	1.394	1.00
77_Y	127_L	1.371	1.00
127_L	131_I	1.369	1.00
304_V	310_L	1.368	1.00
170_Y	189_K	1.368	1.00
89_P	355_Y	1.358	1.00
148_T	152_T	1.352	0.99
145_S	153_V	1.345	0.99
334_A	364_A	1.343	0.99
67_P	71_Q	1.335	0.99
235_E	272_N	1.330	0.99
72_A	380_L	1.328	0.99
18_I	22_K	1.310	0.99
144_A	177_A	1.305	0.99
355_Y	360_P	1.305	0.99
111_I	193_K	1.299	0.99
378_I	390_G	1.299	0.99
320_I	361_T	1.299	0.99
265_R	268_E	1.296	0.99
382_N	390_G	1.294	0.99
230_E	305_K	1.292	0.99
126_L	143_V	1.289	0.99
303_Y	324_N	1.287	0.99
72_A	379_S	1.286	0.99
142_Y	181_L	1.270	0.99
142_Y	168_E	1.269	0.99
61_Q	158_A	1.269	0.99
160_V	164_L	1.265	0.99
183_F	209_V	1.259	0.99
73_I	163_K	1.251	0.99
159_Y	162_I	1.243	0.99
262_L	266_V	1.241	0.99
182_A	209_V	1.234	0.99
18_I	208_L	1.232	0.99
316_N	359_K	1.226	0.99
225_V	256_L	1.222	0.99
56_E	60_T	1.222	0.99
55_E	162_I	1.216	0.99
233_K	236_Y	1.214	0.99
69_V	156_A	1.214	0.99
77_Y	163_K	1.212	0.99
25_I	212_V	1.211	0.99
28_V	179_A	1.205	0.99
53_A	158_A	1.192	0.99
125_T	129_A	1.191	0.99
231_T	324_N	1.190	0.99
65_L	70_K	1.186	0.99
390_G	394_G	1.185	0.99
89_P	358_I	1.182	0.99
200_V	204_A	1.174	0.99
193_K	356_D	1.172	0.99
55_E	167_N	1.171	0.99
368_D	371_K	1.170	0.99
144_A	172_I	1.154	0.98
273_D	391_K	1.146	0.98
292_A	297_P	1.146	0.98
141_I	167_N	1.143	0.98
60_T	152_T	1.139	0.98
227_I	256_L	1.136	0.98
370_N	393_I	1.132	0.98
320_I	363_Y	1.122	0.98
256_L	291_I	1.114	0.98
22_K	26_E	1.111	0.98
227_I	302_L	1.110	0.98
34_N	186_E	1.103	0.98
232_A	237_V	1.099	0.98
237_V	266_V	1.097	0.98
100_S	365_N	1.097	0.98
36_L	172_I	1.093	0.98
129_A	339_I	1.092	0.98
25_I	209_V	1.092	0.98
17_V	204_A	1.090	0.98
209_V	213_V	1.083	0.98
256_L	282_T	1.081	0.97
106_R	359_K	1.075	0.97
296_A	346_A	1.072	0.97
235_E	395_A	1.071	0.97
228_A	262_L	1.067	0.97
113_I	141_I	1.064	0.97
24_I	175_A	1.054	0.97
39_L	43_L	1.053	0.97
94_G	97_Q	1.051	0.97
333_V	376_A	1.048	0.97
19_P	23_D	1.048	0.97
304_V	307_A	1.045	0.97
234_A	265_R	1.043	0.97
333_V	377_S	1.038	0.97
53_A	171_K	1.037	0.97
29_K	212_V	1.035	0.97
345_W	348_I	1.034	0.97
257_S	279_I	1.033	0.97
40_T	176_Q	1.027	0.97
73_I	380_L	1.017	0.96
134_K	164_L	1.017	0.96
89_P	105_W	1.015	0.96
243_A	328_A	1.010	0.96
108_I	111_I	1.010	0.96
62_A	70_K	1.009	0.96
257_S	281_K	1.002	0.96
125_T	339_I	0.997	0.96
268_E	272_N	0.989	0.96
224_L	301_S	0.986	0.96
85_E	135_V	0.986	0.96
129_A	195_V	0.982	0.96
51_I	172_I	0.980	0.96
25_I	183_F	0.979	0.95
233_K	324_N	0.976	0.95
260_D	281_K	0.975	0.95
353_T	360_P	0.975	0.95
227_I	289_I	0.975	0.95
282_T	291_I	0.972	0.95
226_I	241_M	0.965	0.95
92_I	103_V	0.960	0.95
326_P	392_S	0.958	0.95
256_L	292_A	0.953	0.95
311_M	322_L	0.950	0.95
339_I	352_I	0.944	0.95
130_G	164_L	0.942	0.94
53_A	61_Q	0.941	0.94
285_L	310_L	0.941	0.94
370_N	374_L	0.941	0.94
21_V	204_A	0.940	0.94
242_K	388_I	0.939	0.94
78_E	81_K	0.935	0.94
108_I	214_G	0.935	0.94
73_I	160_V	0.931	0.94
228_A	232_A	0.928	0.94
267_E	271_K	0.928	0.94
302_L	322_L	0.928	0.94
366_V	373_L	0.927	0.94
237_V	262_L	0.927	0.94
329_I	366_V	0.926	0.94
377_S	393_I	0.921	0.94
28_V	175_A	0.917	0.94
88_V	358_I	0.914	0.94
24_I	28_V	0.914	0.94
59_K	62_A	0.912	0.93
66_D	69_V	0.912	0.93
18_I	204_A	0.906	0.93
391_K	395_A	0.906	0.93
20_V	23_D	0.905	0.93
71_Q	74_D	0.904	0.93
115_V	143_V	0.898	0.93
227_I	285_L	0.895	0.93
258_N	288_A	0.895	0.93
241_M	255_L	0.893	0.93
34_N	38_E	0.892	0.93
25_I	29_K	0.891	0.93
27_S	42_K	0.887	0.92
236_Y	324_N	0.887	0.92
74_D	159_Y	0.878	0.92
69_V	379_S	0.877	0.92
329_I	373_L	0.875	0.92
285_L	288_A	0.875	0.92
273_D	395_A	0.873	0.92
239_L	395_A	0.873	0.92
204_A	207_Y	0.873	0.92
58_L	62_A	0.872	0.92
311_M	363_Y	0.871	0.92
82_A	86_M	0.869	0.92
68_K	379_S	0.866	0.92
58_L	162_I	0.865	0.92
40_T	48_I	0.860	0.91
45_K	150_E	0.859	0.91
180_A	188_V	0.857	0.91
57_E	152_T	0.856	0.91
31_K	42_K	0.851	0.91
95_G	99_I	0.851	0.91
29_K	183_F	0.848	0.91
234_A	266_V	0.840	0.90
319_A	362_M	0.838	0.90
81_K	131_I	0.837	0.90
351_G	362_M	0.837	0.90
36_L	175_A	0.836	0.90
287_E	290_E	0.836	0.90
83_F	336_P	0.836	0.90
109_E	192_Y	0.833	0.90
84_H	87_L	0.833	0.90
78_E	82_A	0.832	0.90
371_K	397_Y	0.831	0.90
258_N	285_L	0.830	0.90
36_L	180_A	0.828	0.90
113_I	129_A	0.825	0.89
15_S	19_P	0.824	0.89
72_A	376_A	0.824	0.89
126_L	160_V	0.824	0.89
319_A	364_A	0.823	0.89
257_S	262_L	0.821	0.89
168_E	189_K	0.815	0.89
192_Y	316_N	0.814	0.89
87_L	337_N	0.813	0.89
319_A	363_Y	0.812	0.89
24_I	39_L	0.810	0.89
289_I	313_K	0.809	0.89
314_I	320_I	0.809	0.89
387_I	391_K	0.807	0.88
142_Y	189_K	0.805	0.88
36_L	185_T	0.803	0.88
15_S	22_K	0.801	0.88
129_A	352_I	0.801	0.88
311_M	320_I	0.800	0.88
76_A	80_L	0.800	0.88
241_M	270_I	0.799	0.88
41_E	46_V	0.797	0.88
290_E	293_N	0.793	0.88
293_N	313_K	0.793	0.88
31_K	35_A	0.790	0.87
92_I	102_G	0.790	0.87
37_Y	41_E	0.789	0.87
190_K	212_V	0.788	0.87
46_V	147_P	0.787	0.87
355_Y	358_I	0.786	0.87
54_R	171_K	0.781	0.87
235_E	273_D	0.778	0.87
140_E	170_Y	0.777	0.86
225_V	295_I	0.777	0.86
194_I	209_V	0.773	0.86
256_L	288_A	0.773	0.86
123_P	380_L	0.772	0.86
159_Y	163_K	0.772	0.86
88_V	135_V	0.771	0.86
381_A	390_G	0.769	0.86
17_V	200_V	0.769	0.86
82_A	85_E	0.769	0.86
226_I	237_V	0.768	0.86
190_K	344_G	0.768	0.86
113_I	195_V	0.767	0.86
232_A	262_L	0.766	0.86
76_A	333_V	0.765	0.86
120_Y	386_F	0.764	0.86
23_D	26_E	0.762	0.85
147_P	153_V	0.761	0.85
214_G	348_I	0.761	0.85
224_L	253_I	0.761	0.85
103_V	353_T	0.756	0.85
243_A	392_S	0.752	0.85
142_Y	170_Y	0.752	0.85
200_V	250_D	0.750	0.85
25_I	208_L	0.749	0.84
85_E	88_V	0.749	0.84
350_G	360_P	0.747	0.84
23_D	42_K	0.745	0.84
39_L	176_Q	0.745	0.84
185_T	188_V	0.744	0.84
170_Y	188_V	0.744	0.84
336_P	364_A	0.744	0.84
16_R	19_P	0.744	0.84
180_A	185_T	0.743	0.84
353_T	358_I	0.742	0.84
79_Q	333_V	0.740	0.84
305_K	324_N	0.740	0.84
352_I	356_D	0.739	0.84
264_R	267_E	0.739	0.84
31_K	39_L	0.736	0.83
326_P	370_N	0.736	0.83
37_Y	50_N	0.732	0.83
207_Y	211_S	0.731	0.83
329_I	370_N	0.730	0.83
333_V	373_L	0.729	0.83
97_Q	372_Q	0.729	0.83
289_I	304_V	0.729	0.83
325_T	366_V	0.728	0.83
127_L	160_V	0.727	0.83
121_S	385_G	0.726	0.83
91_N	105_W	0.726	0.83
379_S	383_Y	0.726	0.83
20_V	42_K	0.726	0.83
134_K	166_V	0.725	0.82
52_K	140_E	0.725	0.82
194_I	213_V	0.724	0.82
268_E	271_K	0.724	0.82
88_V	91_N	0.724	0.82
62_A	163_K	0.721	0.82
382_N	391_K	0.721	0.82
105_W	358_I	0.716	0.82
126_L	166_V	0.715	0.82
230_E	261_E	0.713	0.81
68_K	375_E	0.713	0.81
209_V	212_V	0.712	0.81
214_G	349_R	0.712	0.81
319_A	334_A	0.711	0.81
33_D	186_E	0.711	0.81
140_E	189_K	0.710	0.81
374_L	378_I	0.709	0.81
129_A	337_N	0.708	0.81
36_L	40_T	0.708	0.81
264_R	268_E	0.706	0.81
37_Y	48_I	0.705	0.81
34_N	37_Y	0.702	0.80
375_E	379_S	0.700	0.80
236_Y	303_Y	0.700	0.80
309_T	312_D	0.699	0.80
93_G	308_Y	0.696	0.80
321_S	330_I	0.695	0.80
106_R	315_V	0.694	0.80
78_E	85_E	0.694	0.80
285_L	289_I	0.693	0.80
232_A	324_N	0.691	0.79
77_Y	164_L	0.691	0.79
75_T	333_V	0.687	0.79
370_N	377_S	0.683	0.79
16_R	20_V	0.681	0.78
366_V	369_I	0.680	0.78
162_I	169_V	0.677	0.78
41_E	48_I	0.677	0.78
52_K	55_E	0.677	0.78
74_D	78_E	0.675	0.78
179_A	209_V	0.672	0.77
36_L	39_L	0.672	0.77
234_A	262_L	0.669	0.77
75_T	78_E	0.667	0.77
20_V	39_L	0.666	0.77
112_G	144_A	0.666	0.77
262_L	265_R	0.666	0.77
27_S	30_T	0.665	0.77
65_L	159_Y	0.665	0.77
243_A	388_I	0.664	0.77
253_I	277_Y	0.662	0.76
40_T	45_K	0.662	0.76
37_Y	47_K	0.659	0.76
297_P	300_L	0.658	0.76
317_A	320_I	0.657	0.76
113_I	166_V	0.655	0.76
37_Y	49_D	0.654	0.76
172_I	180_A	0.653	0.75
307_A	311_M	0.652	0.75
285_L	292_A	0.652	0.75
170_Y	187_S	0.652	0.75
62_A	158_A	0.651	0.75
19_P	22_K	0.651	0.75
121_S	154_N	0.645	0.75
35_A	39_L	0.645	0.75
60_T	63_S	0.644	0.74
104_I	312_D	0.644	0.74
62_A	74_D	0.643	0.74
293_N	315_V	0.639	0.74
77_Y	80_L	0.638	0.74
288_A	292_A	0.638	0.74
110_K	192_Y	0.637	0.74
156_A	383_Y	0.636	0.73
73_I	156_A	0.636	0.73
387_I	394_G	0.632	0.73
232_A	303_Y	0.629	0.73
93_G	363_Y	0.629	0.73
108_I	138_V	0.627	0.72
71_Q	75_T	0.626	0.72
285_L	304_V	0.626	0.72
17_V	21_V	0.625	0.72
126_L	164_L	0.622	0.72
79_Q	377_S	0.616	0.71
325_T	364_A	0.614	0.71
227_I	304_V	0.612	0.71
293_N	311_M	0.612	0.71
57_E	60_T	0.611	0.70
13_D	16_R	0.608	0.70
258_N	284_N	0.607	0.70
218_I	349_R	0.605	0.70
52_K	142_Y	0.605	0.70
87_L	103_V	0.603	0.70
36_L	51_I	0.603	0.70
129_A	143_V	0.602	0.69
236_Y	395_A	0.602	0.69
219_E	337_N	0.601	0.69
261_E	264_R	0.601	0.69
73_I	159_Y	0.600	0.69
191_V	213_V	0.599	0.69
193_K	214_G	0.599	0.69
119_K	217_G	0.598	0.69
53_A	147_P	0.597	0.69
245_A	253_I	0.595	0.68
292_A	314_I	0.594	0.68
307_A	365_N	0.593	0.68
83_F	362_M	0.592	0.68
237_V	303_Y	0.592	0.68
286_D	290_E	0.592	0.68
24_I	43_L	0.586	0.67
64_K	152_T	0.585	0.67
113_I	143_V	0.585	0.67
53_A	169_V	0.584	0.67
55_E	58_L	0.584	0.67
267_E	270_I	0.583	0.67
93_G	102_G	0.581	0.67
331_D	338_H	0.581	0.67
20_V	28_V	0.581	0.67
81_K	135_V	0.580	0.67
225_V	291_I	0.576	0.66
195_V	339_I	0.574	0.66
244_Q	331_D	0.573	0.66
321_S	327_P	0.573	0.66
110_K	142_Y	0.573	0.66
269_K	393_I	0.569	0.65
110_K	191_V	0.568	0.65
28_V	46_V	0.567	0.65
289_I	320_I	0.565	0.65
58_L	159_Y	0.565	0.65
290_E	294_K	0.563	0.64
117_S	120_Y	0.561	0.64
86_M	92_I	0.561	0.64
242_K	273_D	0.560	0.64
106_R	363_Y	0.560	0.64
301_S	337_N	0.559	0.64
263_I	267_E	0.559	0.64
92_I	104_I	0.559	0.64
104_I	363_Y	0.558	0.64
143_V	166_V	0.556	0.63
211_S	348_I	0.556	0.63
122_Y	386_F	0.556	0.63
36_L	188_V	0.553	0.63
241_M	253_I	0.551	0.63
53_A	57_E	0.551	0.63
37_Y	187_S	0.551	0.63
207_Y	210_S	0.551	0.63
13_D	17_V	0.550	0.62
33_D	180_A	0.549	0.62
71_Q	376_A	0.549	0.62
314_I	361_T	0.549	0.62
56_E	59_K	0.548	0.62
100_S	367_R	0.547	0.62
252_Y	295_I	0.545	0.62
25_I	182_A	0.545	0.62
158_A	169_V	0.544	0.62
91_N	104_I	0.543	0.61
148_T	151_G	0.543	0.61
58_L	70_K	0.543	0.61
370_N	397_Y	0.542	0.61
104_I	361_T	0.541	0.61
61_Q	159_Y	0.541	0.61
326_P	374_L	0.540	0.61
25_I	36_L	0.538	0.61
160_V	380_L	0.538	0.61
109_E	293_N	0.537	0.61
319_A	336_P	0.535	0.60
68_K	72_A	0.534	0.60
101_F	319_A	0.534	0.60
140_E	167_N	0.534	0.60
108_I	356_D	0.533	0.60
147_P	172_I	0.533	0.60
79_Q	95_G	0.533	0.60
105_W	360_P	0.532	0.60
76_A	380_L	0.532	0.60
229_D	232_A	0.532	0.60
294_K	347_K	0.530	0.60
250_D	276_I	0.530	0.60
231_T	237_V	0.530	0.60
219_E	321_S	0.530	0.60
65_L	163_K	0.529	0.59
84_H	135_V	0.529	0.59
103_V	360_P	0.528	0.59
370_N	395_A	0.526	0.59
195_V	352_I	0.526	0.59
65_L	69_V	0.524	0.59
21_V	208_L	0.524	0.59
68_K	71_Q	0.523	0.59
210_S	349_R	0.523	0.59
70_K	163_K	0.522	0.58
207_Y	348_I	0.518	0.58
265_R	269_K	0.517	0.58
203_Q	219_E	0.517	0.58
158_A	357_F	0.517	0.58
30_T	268_E	0.517	0.58
217_G	319_A	0.516	0.58
79_Q	96_Y	0.516	0.58
144_A	147_P	0.516	0.58
301_S	327_P	0.516	0.58
71_Q	78_E	0.514	0.57
122_Y	203_Q	0.513	0.57
45_K	176_Q	0.513	0.57
144_A	170_Y	0.513	0.57
117_S	146_P	0.513	0.57
328_A	393_I	0.512	0.57
369_I	373_L	0.512	0.57
327_P	386_F	0.511	0.57
237_V	255_L	0.511	0.57
280_I	291_I	0.509	0.57
221_P	250_D	0.508	0.56
66_D	379_S	0.508	0.56
70_K	162_I	0.508	0.56
121_S	157_L	0.507	0.56
76_A	127_L	0.506	0.56
84_H	317_A	0.506	0.56
102_G	308_Y	0.505	0.56
84_H	337_N	0.504	0.56
92_I	363_Y	0.503	0.56
111_I	195_V	0.502	0.56
15_S	18_I	0.501	0.55
337_N	352_I	0.501	0.55
373_L	377_S	0.501	0.55
218_I	345_W	0.500	0.55
294_K	344_G	0.500	0.55

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4g09A	2	0.9849	100	0.023	Contact Map
1kaeA	2	0.9899	100	0.042	Contact Map
4gicA	2	0.8744	100	0.059	Contact Map
3my7A	2	0.7915	97.6	0.95	Contact Map
1o20A	3	0.8342	97.3	0.952	Contact Map
4itaA	2	0.8166	97.2	0.953	Contact Map
4jbeA	2	0.8317	97.2	0.953	Contact Map
4ghkA	3	0.7915	97.2	0.953	Contact Map
3lnsA	2	0.8166	96.7	0.956	Contact Map
3k9dA	2	0.8342	96.7	0.956	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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