GREMLIN Database
T6SS_VipB - Type VI secretion system, ImpG, VasA, VC_A0110
PFAM: PF05947 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_10
Length: 609 (604)
Sequences: 4381 (3170)
Seq/√Len: 129.0
META: 0.65

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
86_S314_A5.7641.00
352_D433_L5.3741.00
322_A432_L4.7321.00
205_L288_F4.5931.00
184_R267_D4.4021.00
167_L284_F4.1611.00
137_E168_R3.5641.00
531_R549_E3.5631.00
3_Y60_D3.4591.00
572_E603_R3.4541.00
549_E588_V3.4521.00
487_H510_Y3.4381.00
138_I165_L3.3741.00
89_Q308_R3.3741.00
204_H291_D3.2471.00
168_R283_E3.2271.00
268_L286_L3.1871.00
166_R285_E3.1211.00
524_G558_A3.0731.00
351_V390_A3.0541.00
139_T168_R3.0411.00
353_S367_E2.9741.00
412_L428_L2.9471.00
165_L307_F2.8301.00
181_D272_D2.8121.00
88_V111_L2.7971.00
353_S431_R2.7631.00
141_A307_F2.7621.00
166_R283_E2.7021.00
87_I265_F2.6891.00
184_R231_V2.6731.00
202_L266_F2.5851.00
568_G589_V2.5561.00
131_V312_T2.5451.00
554_L589_V2.5021.00
354_V410_L2.4951.00
201_L288_F2.4851.00
165_L288_F2.4831.00
319_P431_R2.4631.00
211_R285_E2.4501.00
231_V267_D2.4351.00
234_D237_E2.4281.00
88_V314_A2.4251.00
551_T590_R2.4091.00
588_V599_R2.3951.00
550_I575_F2.3891.00
182_R267_D2.3381.00
524_G559_F2.3301.00
229_R269_T2.3261.00
185_F266_F2.3251.00
229_R267_D2.2551.00
535_R586_Q2.2331.00
163_L290_L2.2291.00
129_Y312_T2.2251.00
111_L127_T2.2181.00
208_V288_F2.2171.00
336_V351_V2.2001.00
168_R282_D2.1871.00
500_A504_R2.1771.00
187_L266_F2.1521.00
319_P352_D2.1381.00
163_L307_F2.1371.00
136_L175_F2.1091.00
104_T132_T2.0891.00
188_A308_R2.0721.00
234_D573_R2.0671.00
167_L185_F2.0661.00
138_I185_F2.0191.00
549_E586_Q1.9841.00
175_F284_F1.9731.00
110_E124_R1.9651.00
104_T130_D1.9551.00
571_L575_F1.9401.00
356_G368_F1.9331.00
224_P227_A1.9281.00
550_I585_T1.9121.00
141_A165_L1.9111.00
195_A264_L1.8981.00
336_V430_V1.8931.00
333_E391_R1.8841.00
138_I167_L1.8701.00
205_L228_L1.8641.00
164_R285_E1.8451.00
167_L175_F1.8381.00
553_T590_R1.8221.00
174_P177_E1.8201.00
128_A239_L1.8171.00
333_E393_R1.7821.00
238_A251_R1.7681.00
549_E599_R1.7441.00
90_F105_I1.7441.00
102_G134_W1.7131.00
308_R311_C1.7101.00
148_L154_L1.6991.00
149_P152_V1.6991.00
554_L564_L1.6941.00
86_S466_T1.6921.00
90_F312_T1.6821.00
554_L567_F1.6791.00
107_R130_D1.6771.00
574_F578_Y1.6741.00
209_V289_L1.6711.00
165_L286_L1.6711.00
149_P153_R1.6681.00
351_V432_L1.6651.00
235_D248_P1.6571.00
552_L571_L1.6451.00
187_L197_L1.6391.00
354_V430_V1.6321.00
321_R431_R1.6131.00
187_L201_L1.6121.00
84_S468_P1.6061.00
275_L284_F1.5981.00
4_Y8_L1.5921.00
77_H246_S1.5881.00
347_E437_R1.5861.00
227_A270_G1.5851.00
338_P348_V1.5841.00
238_A248_P1.5811.00
322_A430_V1.5771.00
265_F311_C1.5731.00
211_R287_V1.5731.00
527_S553_T1.5681.00
206_V291_D1.5681.00
91_E461_R1.5641.00
207_G222_V1.5571.00
163_L302_V1.5561.00
556_E591_S1.5421.00
328_D331_Q1.5421.00
349_Y435_T1.5391.00
87_I311_C1.5331.00
11_L15_G1.5311.00
89_Q463_R1.5291.00
435_T471_P1.5271.00
164_R287_V1.5221.00
335_H409_F1.5211.00
208_V228_L1.5181.00
85_M259_F1.5181.00
162_A287_V1.5131.00
169_T174_P1.5111.00
113_S116_V1.5081.00
187_L307_F1.5011.00
150_P153_R1.4981.00
140_E304_A1.4921.00
140_E166_R1.4811.00
48_F52_A1.4791.00
141_A302_V1.4771.00
349_Y352_D1.4761.00
556_E593_Q1.4661.00
201_L266_F1.4391.00
528_V550_I1.4321.00
189_G194_A1.4231.00
338_P432_L1.4211.00
547_G584_F1.4051.00
564_L591_S1.4001.00
31_L36_C1.3981.00
102_G132_T1.3971.00
148_L153_R1.3921.00
555_D593_Q1.3911.00
141_A304_A1.3891.00
210_V286_L1.3881.00
127_T312_T1.3801.00
142_E164_R1.3771.00
198_Y230_P1.3751.00
368_F386_A1.3711.00
529_S551_T1.3691.00
256_Y521_Q1.3641.00
350_S433_L1.3631.00
207_G289_L1.3611.00
185_F268_L1.3591.00
12_R42_E1.3581.00
268_L288_F1.3451.00
243_P246_S1.3431.00
6_R56_Q1.3401.00
500_A528_V1.3301.00
319_P433_L1.3291.00
567_F571_L1.3261.00
451_F464_C1.3251.00
526_R555_D1.3241.00
10_Y14_M1.3201.00
11_L48_F1.3201.00
110_E126_R1.3111.00
187_L194_A1.3101.00
406_T474_P1.3091.00
77_H487_H1.3041.00
129_Y262_K1.3021.00
533_V549_E1.3011.00
80_R349_Y1.2891.00
204_H292_R1.2881.00
201_L228_L1.2831.00
551_T588_V1.2821.00
231_V237_E1.2791.00
531_R551_T1.2721.00
85_M239_L1.2681.00
129_Y231_V1.2651.00
148_L151_A1.2641.00
586_Q599_R1.2631.00
106_P109_T1.2561.00
148_L152_V1.2551.00
533_V586_Q1.2541.00
58_K61_D1.2521.00
193_L306_N1.2461.00
77_H254_Q1.2431.00
131_V310_G1.2281.00
139_T283_E1.2271.00
405_G437_R1.2251.00
187_L198_Y1.2251.00
169_T175_F1.2201.00
507_L522_I1.2180.99
556_E594_R1.2080.99
314_A464_C1.2030.99
410_L430_V1.2020.99
348_V408_V1.1950.99
242_Y246_S1.1900.99
529_S553_T1.1900.99
200_L290_L1.1880.99
2_R6_R1.1820.99
90_F127_T1.1780.99
89_Q311_C1.1780.99
186_Y466_T1.1770.99
161_A290_L1.1740.99
167_L183_L1.1740.99
103_F458_P1.1660.99
333_E409_F1.1650.99
185_F309_L1.1630.99
303_D306_N1.1620.99
198_Y233_F1.1570.99
553_T592_T1.1570.99
138_I309_L1.1520.99
209_V287_V1.1510.99
87_I466_T1.1460.99
393_R409_F1.1440.99
77_H510_Y1.1420.99
87_I186_Y1.1400.99
357_V429_S1.1370.99
105_I312_T1.1340.99
8_L12_R1.1320.99
17_E20_E1.1270.99
591_S594_R1.1250.99
565_F598_K1.1200.99
554_L591_S1.1190.99
191_D261_E1.1160.99
366_R426_E1.1130.99
390_A408_V1.1120.99
137_E170_T1.1090.99
144_S148_L1.1080.99
441_L471_P1.1030.99
86_S464_C1.0990.99
24_K28_R1.0930.99
586_Q602_P1.0890.99
84_S125_F1.0870.99
525_I554_L1.0860.99
232_G237_E1.0840.99
320_K432_L1.0830.99
112_R124_R1.0800.99
108_G126_R1.0740.99
210_V223_L1.0720.99
335_H407_E1.0710.99
197_L307_F1.0700.99
67_T481_L1.0700.99
90_F111_L1.0690.99
106_P130_D1.0670.99
208_V227_A1.0670.99
208_V286_L1.0630.99
121_T345_D1.0630.99
530_S548_L1.0600.99
88_V451_F1.0600.99
11_L45_L1.0590.99
339_D342_R1.0520.99
133_L310_G1.0480.98
107_R238_A1.0470.98
143_Y161_A1.0450.98
554_L559_F1.0430.98
93_D96_Q1.0400.98
554_L568_G1.0340.98
569_S573_R1.0340.98
242_Y251_R1.0300.98
149_P154_L1.0290.98
351_V388_Y1.0250.98
241_P349_Y1.0230.98
302_V306_N1.0230.98
483_R505_E1.0220.98
317_L349_Y1.0210.98
511_D519_R1.0200.98
10_Y15_G1.0170.98
197_L302_V1.0150.98
525_I575_F1.0120.98
520_R558_A1.0120.98
251_R255_E1.0100.98
182_R269_T1.0100.98
511_D518_T1.0050.98
533_V588_V1.0010.98
82_I85_M1.0000.98
151_A155_P0.9980.98
145_G150_P0.9980.98
134_W183_L0.9970.98
134_W310_G0.9970.98
504_R523_E0.9960.98
58_K65_E0.9950.98
25_I28_R0.9930.98
167_L286_L0.9910.98
52_A55_V0.9910.98
322_A351_V0.9890.98
205_L290_L0.9890.98
52_A56_Q0.9830.98
503_L528_V0.9820.98
165_L268_L0.9740.98
202_L565_F0.9720.98
91_E463_R0.9670.97
132_T182_R0.9650.97
320_K346_Y0.9640.97
202_L228_L0.9640.97
96_Q99_L0.9580.97
22_Y560_A0.9580.97
343_P346_Y0.9560.97
61_D65_E0.9560.97
318_F436_N0.9560.97
124_R320_K0.9500.97
572_E585_T0.9480.97
356_G426_E0.9420.97
130_D236_D0.9410.97
209_V222_V0.9360.97
261_E466_T0.9320.97
407_E437_R0.9320.97
348_V432_L0.9290.97
146_A153_R0.9280.97
181_D269_T0.9260.97
208_V223_L0.9260.97
84_S469_T0.9190.96
358_G364_E0.9190.96
208_V224_P0.9190.96
479_D483_R0.9150.96
159_A289_L0.9150.96
146_A149_P0.9140.96
278_A281_G0.9130.96
552_L589_V0.9100.96
89_Q310_G0.9050.96
9_A13_E0.9030.96
78_Y510_Y0.8980.96
213_P285_E0.8940.96
150_P154_L0.8930.96
569_S600_W0.8910.96
62_E65_E0.8900.96
387_Y413_V0.8890.96
223_L227_A0.8860.96
536_R544_F0.8850.96
336_V348_V0.8850.96
525_I552_L0.8820.96
107_R128_A0.8810.96
58_K62_E0.8810.96
325_I430_V0.8800.96
84_S440_P0.8790.95
14_M17_E0.8790.95
508_R523_E0.8750.95
522_I525_I0.8730.95
138_I304_A0.8730.95
90_F462_I0.8710.95
526_R553_T0.8700.95
392_R408_V0.8700.95
526_R592_T0.8690.95
185_F286_L0.8680.95
152_V155_P0.8670.95
72_E392_R0.8650.95
347_E473_R0.8650.95
532_P546_R0.8650.95
15_G50_F0.8650.95
216_G219_R0.8640.95
148_L155_P0.8620.95
250_Y510_Y0.8580.95
126_R317_L0.8570.95
31_L34_D0.8540.95
6_R9_A0.8510.95
134_W180_L0.8500.95
15_G46_E0.8490.95
356_G428_L0.8480.95
82_I254_Q0.8460.94
579_A607_R0.8460.94
129_Y237_E0.8450.94
533_V584_F0.8450.94
159_A206_V0.8440.94
250_Y574_F0.8440.94
196_A294_D0.8410.94
43_R46_E0.8380.94
447_D450_G0.8350.94
366_R386_A0.8350.94
368_F419_P0.8310.94
201_L205_L0.8290.94
352_D431_R0.8280.94
186_Y264_L0.8260.94
552_L575_F0.8250.94
10_Y50_F0.8230.94
338_P434_C0.8210.94
147_P150_P0.8210.94
203_A565_F0.8170.93
234_D238_A0.8160.93
199_E565_F0.8140.93
190_D193_L0.8130.93
112_R122_A0.8110.93
371_F510_Y0.8110.93
508_R519_R0.8110.93
490_L494_S0.8090.93
200_L204_H0.8090.93
189_G306_N0.8080.93
169_T178_L0.8080.93
149_P155_P0.8060.93
537_L545_V0.8050.93
438_D471_P0.8050.93
110_E319_P0.8040.93
64_P67_T0.8020.93
525_I587_L0.8010.93
526_R529_S0.8000.93
74_L492_Y0.7980.93
134_W178_L0.7980.93
16_A20_E0.7970.93
438_D441_L0.7950.92
119_D442_R0.7950.92
519_R523_E0.7950.92
355_T367_E0.7930.92
114_R450_G0.7920.92
165_L185_F0.7880.92
208_V268_L0.7870.92
92_P96_Q0.7850.92
250_Y487_H0.7850.92
233_F263_F0.7820.92
395_R435_T0.7820.92
153_R156_A0.7810.92
115_P120_G0.7810.92
145_G148_L0.7810.92
123_C436_N0.7810.92
308_R465_L0.7800.92
233_F566_L0.7770.92
199_E203_A0.7740.91
113_S443_L0.7730.91
113_S440_P0.7710.91
503_L571_L0.7690.91
91_E137_E0.7690.91
559_F563_G0.7670.91
169_T284_F0.7650.91
322_A336_V0.7640.91
136_L310_G0.7620.91
488_L492_Y0.7600.91
36_C42_E0.7590.91
253_L506_L0.7570.90
32_E35_E0.7550.90
82_I258_A0.7540.90
255_E262_K0.7530.90
129_Y184_R0.7530.90
538_G541_P0.7520.90
57_L60_D0.7520.90
539_R542_G0.7510.90
151_A156_A0.7500.90
185_F307_F0.7500.90
348_V351_V0.7490.90
4_Y19_A0.7490.90
505_E508_R0.7470.90
453_L462_I0.7470.90
373_S485_I0.7450.90
322_A338_P0.7440.90
521_Q559_F0.7440.90
146_A150_P0.7440.90
199_E204_H0.7420.90
4_Y7_E0.7420.90
87_I465_L0.7420.90
31_L40_H0.7420.90
31_L37_E0.7410.90
591_S597_I0.7360.89
534_V546_R0.7350.89
202_L231_V0.7340.89
215_G219_R0.7330.89
115_P122_A0.7320.89
172_G282_D0.7320.89
344_L401_Q0.7310.89
14_M50_F0.7300.89
371_F413_V0.7300.89
213_P283_E0.7270.89
145_G149_P0.7270.89
147_P153_R0.7260.89
174_P280_A0.7260.89
26_A29_L0.7240.88
347_E392_R0.7240.88
213_P284_F0.7230.88
39_P44_L0.7230.88
548_L579_A0.7220.88
376_H387_Y0.7200.88
559_F567_F0.7200.88
576_A603_R0.7190.88
179_G272_D0.7180.88
503_L575_F0.7180.88
437_R471_P0.7160.88
56_Q60_D0.7160.88
30_G37_E0.7130.88
406_T476_L0.7130.88
472_R512_F0.7120.88
87_I259_F0.7120.88
573_R606_Q0.7110.88
78_Y483_R0.7110.88
137_E304_A0.7100.87
589_V597_I0.7100.87
585_T603_R0.7080.87
198_Y202_L0.7080.87
213_P216_G0.7070.87
32_E36_C0.7070.87
324_P357_V0.7060.87
146_A152_V0.7020.87
85_M128_A0.7000.87
494_S578_Y0.7000.87
414_D419_P0.7000.87
444_P447_D0.7000.87
278_A282_D0.7000.87
487_H509_L0.7000.87
601_P604_A0.6990.87
150_P156_A0.6990.87
77_H242_Y0.6980.87
521_Q524_G0.6980.87
548_L587_L0.6940.86
61_D64_P0.6940.86
51_L55_V0.6930.86
321_R429_S0.6930.86
228_L288_F0.6920.86
389_T417_F0.6920.86
371_F387_Y0.6900.86
188_A194_A0.6890.86
188_A306_N0.6880.86
86_S468_P0.6880.86
516_A519_R0.6880.86
198_Y566_L0.6880.86
455_G462_I0.6850.86
19_A23_P0.6850.86
542_G545_V0.6840.85
537_L543_A0.6840.85
186_Y265_F0.6810.85
109_T453_L0.6800.85
212_P281_G0.6800.85
85_M258_A0.6800.85
501_E504_R0.6770.85
465_L468_P0.6760.85
88_V464_C0.6750.85
68_E72_E0.6740.85
11_L51_L0.6730.85
522_I567_F0.6730.85
576_A606_Q0.6720.84
3_Y53_A0.6690.84
402_R407_E0.6690.84
144_S149_P0.6680.84
359_P424_L0.6680.84
579_A585_T0.6670.84
150_P155_P0.6650.84
503_L552_L0.6650.84
80_R432_L0.6640.84
210_V274_A0.6630.84
373_S376_H0.6630.84
42_E46_E0.6630.84
199_E563_G0.6620.84
546_R580_S0.6620.84
371_F487_H0.6610.83
77_H250_Y0.6610.83
161_A563_G0.6590.83
23_P29_L0.6570.83
552_L587_L0.6560.83
350_S475_P0.6560.83
481_L489_S0.6550.83
252_L263_F0.6550.83
586_Q603_R0.6520.83
445_F465_L0.6520.83
106_P127_T0.6510.83
202_L230_P0.6510.83
169_T173_L0.6500.82
376_H473_R0.6500.82
568_G572_E0.6490.82
49_A53_A0.6490.82
85_M240_L0.6490.82
13_E30_G0.6480.82
40_H43_R0.6470.82
229_R234_D0.6460.82
24_K27_G0.6460.82
536_R542_G0.6430.82
100_T173_L0.6410.82
114_R452_T0.6400.81
116_V122_A0.6380.81
210_V268_L0.6380.81
272_D275_L0.6380.81
36_C47_G0.6370.81
143_Y290_L0.6360.81
36_C147_P0.6350.81
82_I255_E0.6350.81
52_A59_L0.6350.81
336_V390_A0.6340.81
327_L421_R0.6340.81
311_C577_L0.6330.81
508_R511_D0.6320.81
557_D593_Q0.6320.81
151_A154_L0.6320.81
555_D558_A0.6320.81
181_D271_L0.6310.81
149_P156_A0.6310.81
89_Q307_F0.6310.81
398_S405_G0.6290.80
559_F571_L0.6290.80
575_F585_T0.6270.80
437_R473_R0.6250.80
81_P471_P0.6240.80
569_S572_E0.6240.80
75_Y510_Y0.6230.80
72_E79_L0.6220.80
491_N506_L0.6220.80
232_G263_F0.6210.79
440_P443_L0.6210.79
232_G255_E0.6210.79
486_S490_L0.6200.79
78_Y250_Y0.6190.79
210_V221_V0.6190.79
242_Y254_Q0.6190.79
223_L226_S0.6190.79
267_D271_L0.6180.79
233_F262_K0.6180.79
573_R603_R0.6180.79
302_V307_F0.6170.79
184_R310_G0.6160.79
512_F518_T0.6150.79
541_P545_V0.6150.79
113_S121_T0.6140.79
491_N495_L0.6140.79
121_T439_L0.6130.79
406_T437_R0.6120.78
138_I310_G0.6120.78
586_Q601_P0.6120.78
68_E79_L0.6120.78
75_Y78_Y0.6110.78
324_P427_T0.6110.78
489_S493_L0.6110.78
323_E340_R0.6110.78
491_N494_S0.6110.78
386_A420_Y0.6110.78
494_S580_S0.6100.78
75_Y247_F0.6100.78
389_T563_G0.6100.78
116_V120_G0.6090.78
155_P158_R0.6080.78
198_Y565_F0.6080.78
145_G152_V0.6070.78
79_L131_V0.6070.78
242_Y512_F0.6060.78
235_D251_R0.6060.78
384_R416_D0.6060.78
453_L457_A0.6040.78
237_E262_K0.6040.78
528_V552_L0.6030.77
490_L578_Y0.6020.77
443_L450_G0.6020.77
48_F312_T0.6010.77
67_T485_I0.6010.77
136_L180_L0.6000.77
169_T282_D0.5980.77
356_G386_A0.5980.77
249_G252_L0.5970.77
342_R346_Y0.5970.77
335_H343_P0.5960.77
15_G51_L0.5950.77
572_E576_A0.5950.77
228_L254_Q0.5950.77
213_P219_R0.5940.76
163_L212_P0.5940.76
36_C45_L0.5930.76
101_E179_G0.5920.76
591_S595_G0.5910.76
457_A462_I0.5910.76
572_E587_L0.5910.76
194_A306_N0.5900.76
572_E600_W0.5900.76
252_L570_V0.5900.76
387_Y414_D0.5890.76
538_G542_G0.5890.76
18_F22_Y0.5880.76
113_S123_C0.5880.76
21_A27_G0.5870.76
198_Y264_L0.5870.76
400_R407_E0.5860.75
63_F481_L0.5860.75
88_V375_R0.5860.75
94_P460_A0.5860.75
111_L314_A0.5850.75
63_F66_F0.5830.75
58_K349_Y0.5830.75
152_V158_R0.5810.75
589_V608_P0.5810.75
89_Q137_E0.5800.75
199_E536_R0.5790.75
520_R523_E0.5790.75
176_S280_A0.5780.74
207_G266_F0.5780.74
509_L522_I0.5770.74
64_P482_W0.5770.74
356_G458_P0.5760.74
198_Y569_S0.5760.74
314_A468_P0.5760.74
48_F387_Y0.5750.74
63_F67_T0.5750.74
347_E471_P0.5750.74
228_L268_L0.5750.74
338_P430_V0.5740.74
250_Y578_Y0.5740.74
71_L75_Y0.5730.74
254_Q512_F0.5730.74
495_L578_Y0.5730.74
37_E42_E0.5730.74
205_L208_V0.5730.74
9_A190_D0.5730.74
143_Y163_L0.5720.74
105_I529_S0.5700.73
184_R237_E0.5690.73
250_Y490_L0.5690.73
481_L485_I0.5680.73
53_A420_Y0.5680.73
517_A521_Q0.5680.73
206_V422_A0.5680.73
565_F569_S0.5660.73
116_V119_D0.5650.73
162_A290_L0.5650.73
15_G31_L0.5640.73
85_M315_V0.5640.73
131_V184_R0.5620.72
210_V284_F0.5620.72
568_G600_W0.5620.72
8_L26_A0.5620.72
12_R36_C0.5620.72
445_F464_C0.5610.72
475_P512_F0.5610.72
198_Y563_G0.5600.72
166_R213_P0.5590.72
125_F310_G0.5590.72
39_P43_R0.5590.72
72_E80_R0.5580.72
174_P282_D0.5580.72
428_L466_T0.5580.72
144_S153_R0.5570.72
227_A269_T0.5570.72
181_D270_G0.5570.72
573_R576_A0.5560.72
16_A170_T0.5560.72
162_A289_L0.5560.72
371_F435_T0.5560.72
201_L290_L0.5560.72
152_V156_A0.5550.71
271_L286_L0.5540.71
258_A262_K0.5540.71
320_K340_R0.5540.71
368_F426_E0.5530.71
141_A306_N0.5530.71
499_G536_R0.5530.71
115_P519_R0.5530.71
65_E477_G0.5520.71
318_F434_C0.5520.71
368_F425_R0.5520.71
25_I48_F0.5520.71
98_K101_E0.5520.71
11_L47_G0.5520.71
108_G130_D0.5510.71
348_V494_S0.5510.71
511_D522_I0.5510.71
520_R591_S0.5500.71
320_K339_D0.5500.71
15_G24_K0.5500.71
324_P429_S0.5490.71
550_I576_A0.5490.71
69_A72_E0.5490.71
132_T525_I0.5490.71
511_D514_D0.5490.71
126_R543_A0.5480.71
121_T346_Y0.5480.71
58_K63_F0.5480.71
202_L205_L0.5460.70
189_G465_L0.5450.70
180_L185_F0.5450.70
554_L587_L0.5450.70
395_R403_R0.5440.70
173_L177_E0.5430.70
3_Y6_R0.5430.70
66_F206_V0.5430.70
165_L205_L0.5420.70
97_G103_F0.5420.70
125_F589_V0.5420.70
564_L589_V0.5420.70
86_S465_L0.5410.70
327_L334_Y0.5400.69
210_V217_G0.5400.69
23_P26_A0.5390.69
130_D257_F0.5390.69
136_L309_L0.5390.69
322_A388_Y0.5390.69
320_K434_C0.5390.69
11_L49_A0.5390.69
191_D194_A0.5380.69
353_S460_A0.5370.69
436_N439_L0.5370.69
139_T166_R0.5360.69
138_I307_F0.5360.69
47_G56_Q0.5360.69
138_I188_A0.5350.69
154_L157_G0.5350.69
460_A465_L0.5340.69
197_L306_N0.5340.69
97_G100_T0.5340.69
441_L470_P0.5340.69
44_L241_P0.5330.68
182_R272_D0.5330.68
369_R385_G0.5320.68
248_P315_V0.5320.68
126_R311_C0.5320.68
22_Y31_L0.5320.68
326_R425_R0.5310.68
77_H323_E0.5310.68
113_S122_A0.5300.68
322_A429_S0.5300.68
513_Q518_T0.5300.68
89_Q304_A0.5290.68
336_V408_V0.5280.68
355_T431_R0.5280.68
366_R421_R0.5280.68
486_S493_L0.5270.68
194_A264_L0.5270.68
215_G218_A0.5270.68
143_Y200_L0.5260.67
445_F450_G0.5260.67
128_A131_V0.5260.67
107_R236_D0.5260.67
114_R504_R0.5260.67
184_R268_L0.5250.67
61_D486_S0.5250.67
437_R441_L0.5250.67
250_Y494_S0.5240.67
564_L567_F0.5240.67
290_L402_R0.5240.67
589_V598_K0.5230.67
243_P475_P0.5230.67
170_T173_L0.5230.67
156_A506_L0.5230.67
590_R596_E0.5230.67
38_D43_R0.5230.67
229_R352_D0.5230.67
85_M88_V0.5220.67
210_V271_L0.5220.67
266_F288_F0.5200.67
512_F567_F0.5200.67
255_E439_L0.5190.66
371_F486_S0.5190.66
115_P121_T0.5190.66
3_Y49_A0.5180.66
596_E599_R0.5180.66
343_P437_R0.5180.66
263_F314_A0.5170.66
92_P98_K0.5170.66
206_V289_L0.5170.66
62_E79_L0.5170.66
78_Y512_F0.5160.66
346_Y435_T0.5160.66
138_I305_D0.5160.66
588_V592_T0.5150.66
211_R393_R0.5150.66
203_A598_K0.5150.66
540_G543_A0.5150.66
212_P215_G0.5150.66
128_A262_K0.5140.66
131_V199_E0.5140.66
398_S401_Q0.5140.66
195_A369_R0.5140.66
554_L592_T0.5130.66
202_L320_K0.5130.66
46_E50_F0.5130.66
63_F85_M0.5120.65
207_G224_P0.5120.65
132_T181_D0.5110.65
40_H324_P0.5100.65
346_Y437_R0.5100.65
68_E480_L0.5100.65
100_T177_E0.5100.65
34_D40_H0.5100.65
10_Y387_Y0.5100.65
29_L39_P0.5090.65
496_V530_S0.5080.65
193_L210_V0.5080.65
598_K602_P0.5080.65
165_L304_A0.5070.65
579_A605_G0.5070.65
15_G30_G0.5060.64
209_V220_P0.5060.64
28_R31_L0.5060.64
350_S390_A0.5060.64
185_F269_T0.5050.64
15_G19_A0.5050.64
438_D473_R0.5050.64
125_F194_A0.5050.64
179_G182_R0.5050.64
140_E210_V0.5040.64
208_V226_S0.5040.64
572_E586_Q0.5040.64
371_F417_F0.5040.64
10_Y22_Y0.5040.64
484_L488_L0.5030.64
47_G51_L0.5030.64
8_L39_P0.5030.64
415_L418_A0.5020.64
105_I551_T0.5020.64
332_T416_D0.5020.64
200_L300_L0.5010.64
258_A472_R0.5000.64
550_I571_L0.5000.64
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4me7E 2 0.064 13.9 0.982 Contact Map
1h0hA 1 0.1527 10.9 0.983 Contact Map
3bmbA 1 0.1905 7.7 0.984 Contact Map
2cw1A 1 0.0985 6.9 0.984 Contact Map
2w9yA 1 0.1084 6.7 0.984 Contact Map
4bxhA 3 0.0673 6.5 0.984 Contact Map
3he5A 1 0.0263 5.8 0.985 Contact Map
1z21A 1 0.1527 5.7 0.985 Contact Map
1kqfA 3 0.179 5.7 0.985 Contact Map
3ibpA 2 0.0837 5 0.985 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0155 seconds.