Tcp11 - PFAM28P - GREMLIN Contacts

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Tcp11 - T-complex protein 11

PFAM:	PF05794	Sequences: LAHEIAFDPDFQFPPNSLEGRVKETMHKAFWDALREELPPDYSRAIKLLKEIKEILLSLLLPPNRLRNQIEEVLDLDLIRQQAEHGALDIEKLAEFILSLLKKLCAPVRDEEVKKLVEKLTDGSNNSDVGDLVDGLRGIFEVLELMKLDMANFQIRSLRPHLIEHAVEYERKKFQERLEKGSLDRTRKWLREAAAELLAESEHSSDPEGPSPSDKVLNQGLLDLLLWSSEEFPETLLLDRARLQELRAQLQQLIILASVLLVTRSLLGSDLSGSSPSFVKKLKRRLKALLEDEAVESIALEIVREETKASLKGQLLKVLQPDSPPVRKLLEQRIRLFLLARLSARVLGRVGAQKSAPELPGGLAPLQEELEELAERLARLVNVNWQVFGPWYEEIL	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_10
Length:	396 (387)
Sequences:	918 (647)
Seq/√Len:	32.9
META:	0.118

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
329_L	333_R	4.380	1.00
109_R	149_D	4.167	1.00
78_L	81_Q	4.085	1.00
105_C	110_D	3.878	1.00
28_K	32_D	3.381	1.00
301_E	304_R	3.346	1.00
105_C	146_M	3.334	1.00
301_E	305_E	3.188	1.00
4_E	11_F	3.143	1.00
314_Q	318_V	3.073	1.00
4_E	8_D	2.721	1.00
29_A	32_D	2.673	1.00
105_C	113_V	2.527	1.00
4_E	7_F	2.484	1.00
283_K	369_E	2.479	1.00
309_A	313_G	2.451	1.00
295_V	301_E	2.449	1.00
314_Q	317_K	2.419	0.99
315_L	318_V	2.332	0.99
186_T	234_E	2.260	0.99
3_H	170_E	2.247	0.99
4_E	13_F	2.217	0.99
294_A	298_I	2.193	0.99
265_S	269_S	2.187	0.99
2_A	11_F	2.186	0.99
52_I	140_F	2.172	0.99
297_S	301_E	2.171	0.99
24_E	28_K	2.170	0.99
106_A	149_D	2.150	0.99
315_L	319_L	2.127	0.99
155_I	217_L	2.102	0.98
326_V	329_L	2.099	0.98
7_F	11_F	2.067	0.98
110_D	146_M	2.066	0.98
102_K	114_K	2.044	0.98
314_Q	323_S	2.034	0.98
2_A	13_F	2.029	0.98
300_L	303_V	2.011	0.98
299_A	305_E	1.991	0.98
23_K	27_H	1.987	0.98
106_A	110_D	1.940	0.97
75_D	81_Q	1.882	0.97
106_A	160_P	1.866	0.97
250_L	373_L	1.862	0.97
183_L	261_L	1.839	0.96
152_N	239_D	1.821	0.96
293_E	301_E	1.819	0.96
89_D	133_V	1.803	0.96
105_C	149_D	1.800	0.96
3_H	16_N	1.782	0.96
5_I	155_I	1.761	0.95
105_C	142_V	1.758	0.95
271_L	286_L	1.750	0.95
48_L	51_E	1.748	0.95
308_K	312_K	1.740	0.95
354_K	357_P	1.731	0.95
317_K	320_Q	1.718	0.95
215_K	220_G	1.712	0.94
160_P	183_L	1.696	0.94
22_V	28_K	1.688	0.94
56_L	134_D	1.674	0.94
388_F	392_Y	1.663	0.94
28_K	247_R	1.659	0.94
22_V	29_A	1.655	0.93
73_V	96_F	1.651	0.93
56_L	183_L	1.646	0.93
18_L	22_V	1.645	0.93
109_R	146_M	1.634	0.93
112_E	145_L	1.623	0.93
295_V	299_A	1.613	0.93
8_D	11_F	1.599	0.92
170_E	333_R	1.577	0.92
353_Q	356_A	1.571	0.91
76_L	155_I	1.554	0.91
298_I	304_R	1.549	0.91
300_L	305_E	1.547	0.91
105_C	116_L	1.536	0.91
246_L	249_Q	1.535	0.90
169_Y	173_K	1.520	0.90
17_S	20_G	1.514	0.90
59_L	63_P	1.509	0.90
2_A	7_F	1.507	0.90
297_S	302_I	1.502	0.90
314_Q	320_Q	1.502	0.90
223_D	335_R	1.500	0.89
299_A	303_V	1.496	0.89
336_L	339_L	1.478	0.89
388_F	391_W	1.473	0.89
155_I	248_A	1.464	0.88
96_F	143_L	1.457	0.88
381_V	385_W	1.454	0.88
5_I	159_R	1.441	0.87
333_R	363_L	1.428	0.87
299_A	304_R	1.423	0.87
371_E	375_E	1.423	0.87
40_P	45_A	1.420	0.87
108_V	146_M	1.412	0.86
384_N	388_F	1.409	0.86
174_F	183_L	1.403	0.86
142_V	146_M	1.401	0.86
310_S	319_L	1.375	0.85
183_L	234_E	1.371	0.85
311_L	318_V	1.368	0.85
88_L	388_F	1.365	0.84
308_K	311_L	1.361	0.84
355_S	359_L	1.359	0.84
31_W	147_K	1.358	0.84
7_F	13_F	1.358	0.84
110_D	113_V	1.355	0.84
311_L	314_Q	1.351	0.84
148_L	152_N	1.345	0.84
293_E	298_I	1.344	0.83
294_A	297_S	1.344	0.83
189_W	235_T	1.343	0.83
56_L	106_A	1.330	0.83
113_V	116_L	1.330	0.83
111_E	257_A	1.322	0.82
186_T	189_W	1.319	0.82
293_E	297_S	1.317	0.82
106_A	166_A	1.310	0.82
319_L	327_R	1.295	0.81
31_W	48_L	1.291	0.81
140_F	162_L	1.290	0.81
75_D	86_G	1.288	0.81
104_L	153_F	1.280	0.80
196_E	254_I	1.280	0.80
133_V	246_L	1.276	0.80
72_E	84_E	1.273	0.80
251_Q	255_I	1.271	0.80
65_R	166_A	1.267	0.80
281_K	284_R	1.266	0.80
40_P	51_E	1.264	0.79
30_F	37_E	1.253	0.79
37_E	49_L	1.251	0.79
174_F	234_E	1.246	0.78
8_D	13_F	1.241	0.78
307_T	315_L	1.240	0.78
113_V	142_V	1.239	0.78
210_P	380_L	1.229	0.77
189_W	220_G	1.226	0.77
83_A	88_L	1.225	0.77
331_E	339_L	1.217	0.77
4_E	14_P	1.187	0.75
246_L	373_L	1.175	0.74
42_Y	52_I	1.164	0.73
151_A	155_I	1.149	0.73
20_G	24_E	1.146	0.72
14_P	17_S	1.143	0.72
34_L	38_L	1.142	0.72
308_K	315_L	1.141	0.72
313_G	317_K	1.139	0.72
239_D	242_R	1.128	0.71
105_C	109_R	1.128	0.71
179_E	328_K	1.124	0.71
195_A	199_A	1.104	0.69
48_L	59_L	1.103	0.69
225_L	250_L	1.101	0.69
314_Q	321_P	1.097	0.69
297_S	303_V	1.097	0.69
152_N	159_R	1.088	0.68
6_A	10_D	1.086	0.68
313_G	318_V	1.080	0.68
31_W	38_L	1.079	0.68
16_N	252_Q	1.079	0.68
170_E	239_D	1.078	0.68
299_A	302_I	1.076	0.67
294_A	301_E	1.072	0.67
389_G	393_E	1.070	0.67
116_L	146_M	1.069	0.67
247_R	251_Q	1.066	0.67
312_K	324_P	1.066	0.67
223_D	342_L	1.063	0.66
297_S	305_E	1.062	0.66
173_K	178_L	1.062	0.66
179_E	373_L	1.059	0.66
205_S	209_G	1.058	0.66
6_A	9_P	1.052	0.66
78_L	82_Q	1.051	0.66
30_F	289_L	1.043	0.65
81_Q	89_D	1.039	0.65
174_F	235_T	1.039	0.65
31_W	137_R	1.038	0.65
59_L	146_M	1.037	0.65
88_L	261_L	1.036	0.64
286_L	302_I	1.030	0.64
31_W	51_E	1.025	0.64
95_E	99_S	1.025	0.64
170_E	326_V	1.022	0.63
314_Q	319_L	1.021	0.63
3_H	7_F	1.019	0.63
345_R	348_G	1.019	0.63
302_I	305_E	1.016	0.63
78_L	85_H	1.015	0.63
77_D	95_E	1.008	0.62
343_S	347_L	1.005	0.62
316_L	319_L	1.005	0.62
148_L	151_A	1.004	0.62
39_P	42_Y	1.003	0.62
192_E	223_D	0.996	0.61
173_K	176_E	0.993	0.61
139_I	150_M	0.993	0.61
53_K	57_L	0.991	0.61
318_V	323_S	0.986	0.61
6_A	166_A	0.985	0.60
105_C	153_F	0.978	0.60
109_R	152_N	0.977	0.60
5_I	78_L	0.977	0.60
93_L	390_P	0.976	0.60
383_V	388_F	0.974	0.60
146_M	159_R	0.973	0.60
167_V	387_V	0.973	0.60
40_P	46_I	0.969	0.59
338_L	356_A	0.968	0.59
149_D	152_N	0.966	0.59
28_K	137_R	0.963	0.59
105_C	170_E	0.962	0.59
338_L	343_S	0.962	0.59
116_L	384_N	0.959	0.58
116_L	153_F	0.957	0.58
33_A	44_R	0.953	0.58
19_E	24_E	0.949	0.58
6_A	330_L	0.948	0.57
75_D	88_L	0.944	0.57
104_L	154_Q	0.941	0.57
293_E	318_V	0.940	0.57
186_T	190_L	0.935	0.56
148_L	163_I	0.934	0.56
106_A	133_V	0.929	0.56
253_L	334_I	0.927	0.56
114_K	282_L	0.926	0.56
317_K	380_L	0.922	0.55
209_G	232_F	0.921	0.55
101_L	113_V	0.920	0.55
24_E	30_F	0.920	0.55
97_I	144_E	0.920	0.55
329_L	335_R	0.917	0.55
37_E	44_R	0.917	0.55
77_D	334_I	0.910	0.54
72_E	100_L	0.907	0.54
22_V	27_H	0.905	0.54
35_R	131_D	0.905	0.54
26_M	29_A	0.900	0.54
101_L	142_V	0.893	0.53
376_R	380_L	0.893	0.53
312_K	318_V	0.887	0.52
231_E	240_R	0.886	0.52
350_V	356_A	0.879	0.52
111_E	289_L	0.878	0.52
55_I	144_E	0.878	0.52
110_D	149_D	0.875	0.51
36_E	162_L	0.871	0.51
332_Q	336_L	0.868	0.51
144_E	153_F	0.867	0.51
306_E	309_A	0.863	0.50
156_R	243_L	0.863	0.50
2_A	8_D	0.860	0.50
5_I	11_F	0.859	0.50
53_K	114_K	0.859	0.50
311_L	322_D	0.859	0.50
146_M	154_Q	0.859	0.50
307_T	314_Q	0.858	0.50
59_L	156_R	0.858	0.50
217_L	221_L	0.851	0.49
63_P	66_L	0.849	0.49
316_L	320_Q	0.848	0.49
232_F	240_R	0.845	0.49
261_L	362_G	0.840	0.49
295_V	298_I	0.840	0.49
105_C	163_I	0.836	0.48
252_Q	255_I	0.836	0.48
169_Y	176_E	0.832	0.48
74_L	109_R	0.828	0.48
159_R	189_W	0.828	0.48
327_R	333_R	0.825	0.47
107_P	110_D	0.823	0.47
307_T	310_S	0.822	0.47
13_F	144_E	0.820	0.47
140_F	303_V	0.819	0.47
57_L	67_R	0.818	0.47
67_R	89_D	0.817	0.47
136_L	191_R	0.817	0.47
337_F	388_F	0.816	0.47
285_R	301_E	0.812	0.46
238_L	331_E	0.809	0.46
338_L	347_L	0.805	0.46
292_D	313_G	0.803	0.45
67_R	139_I	0.801	0.45
104_L	162_L	0.801	0.45
65_R	93_L	0.799	0.45
196_E	223_D	0.799	0.45
94_A	246_L	0.797	0.45
234_E	257_A	0.794	0.45
363_L	366_L	0.794	0.45
9_P	13_F	0.792	0.45
114_K	144_E	0.792	0.45
61_L	388_F	0.790	0.44
26_M	30_F	0.789	0.44
296_E	300_L	0.789	0.44
155_I	160_P	0.789	0.44
19_E	30_F	0.788	0.44
105_C	138_G	0.788	0.44
192_E	253_L	0.787	0.44
21_R	30_F	0.787	0.44
53_K	134_D	0.786	0.44
248_A	259_V	0.784	0.44
314_Q	322_D	0.783	0.44
5_I	9_P	0.782	0.44
165_H	384_N	0.781	0.44
146_M	153_F	0.781	0.44
13_F	20_G	0.779	0.44
27_H	30_F	0.779	0.44
86_G	136_L	0.775	0.43
8_D	353_Q	0.775	0.43
71_E	132_L	0.775	0.43
241_A	291_E	0.769	0.43
298_I	311_L	0.767	0.43
355_S	358_E	0.766	0.42
162_L	250_L	0.757	0.42
11_F	20_G	0.757	0.42
85_H	134_D	0.755	0.42
270_D	273_G	0.752	0.41
192_E	231_E	0.750	0.41
103_K	236_L	0.749	0.41
308_K	314_Q	0.749	0.41
331_E	335_R	0.747	0.41
174_F	186_T	0.744	0.41
220_G	274_S	0.744	0.41
234_E	238_L	0.738	0.40
312_K	315_L	0.737	0.40
4_E	144_E	0.736	0.40
375_E	380_L	0.736	0.40
103_K	157_S	0.735	0.40
350_V	353_Q	0.734	0.40
37_E	75_D	0.733	0.40
18_L	286_L	0.732	0.40
81_Q	133_V	0.732	0.40
327_R	331_E	0.731	0.40
8_D	14_P	0.730	0.40
96_F	156_R	0.726	0.39
313_G	319_L	0.724	0.39
56_L	101_L	0.721	0.39
196_E	282_L	0.721	0.39
188_K	276_P	0.718	0.39
106_A	162_L	0.718	0.39
234_E	362_G	0.716	0.38
307_T	317_K	0.712	0.38
42_Y	48_L	0.711	0.38
118_E	126_N	0.710	0.38
356_A	359_L	0.710	0.38
138_G	141_E	0.709	0.38
317_K	321_P	0.709	0.38
195_A	198_L	0.709	0.38
174_F	242_R	0.707	0.38
4_E	23_K	0.705	0.38
319_L	329_L	0.705	0.38
59_L	304_R	0.705	0.38
315_L	322_D	0.705	0.38
59_L	150_M	0.704	0.38
209_G	364_A	0.703	0.37
336_L	340_A	0.700	0.37
3_H	239_D	0.699	0.37
297_S	300_L	0.698	0.37
224_L	236_L	0.697	0.37
356_A	361_G	0.695	0.37
56_L	128_D	0.695	0.37
32_D	77_D	0.694	0.37
351_G	357_P	0.693	0.37
102_K	117_V	0.692	0.37
350_V	359_L	0.692	0.37
2_A	14_P	0.690	0.36
70_I	103_K	0.690	0.36
7_F	153_F	0.689	0.36
157_S	244_Q	0.688	0.36
3_H	392_Y	0.686	0.36
132_L	156_R	0.685	0.36
3_H	113_V	0.681	0.36
160_P	261_L	0.680	0.36
15_P	18_L	0.676	0.35
156_R	182_S	0.675	0.35
37_E	146_M	0.673	0.35
18_L	29_A	0.672	0.35
243_L	380_L	0.672	0.35
60_L	79_I	0.671	0.35
247_R	312_K	0.671	0.35
105_C	144_E	0.671	0.35
74_L	311_L	0.669	0.35
162_L	309_A	0.667	0.35
5_I	65_R	0.665	0.35
166_A	232_F	0.663	0.34
110_D	152_N	0.663	0.34
16_N	55_I	0.663	0.34
81_Q	86_G	0.663	0.34
294_A	299_A	0.660	0.34
99_S	111_E	0.659	0.34
105_C	159_R	0.658	0.34
366_L	377_L	0.658	0.34
143_L	235_T	0.657	0.34
276_P	336_L	0.656	0.34
338_L	379_R	0.656	0.34
46_I	80_R	0.656	0.34
366_L	370_L	0.655	0.34
116_L	154_Q	0.654	0.34
318_V	322_D	0.652	0.34
188_K	192_E	0.651	0.33
133_V	139_I	0.651	0.33
138_G	142_V	0.650	0.33
253_L	329_L	0.650	0.33
85_H	133_V	0.649	0.33
113_V	170_E	0.649	0.33
309_A	316_L	0.649	0.33
140_F	294_A	0.648	0.33
116_L	144_E	0.648	0.33
20_G	151_A	0.646	0.33
133_V	242_R	0.645	0.33
143_L	159_R	0.645	0.33
313_G	316_L	0.645	0.33
80_R	84_E	0.643	0.33
162_L	282_L	0.641	0.33
286_L	298_I	0.640	0.33
137_R	147_K	0.640	0.33
199_A	205_S	0.638	0.33
247_R	290_L	0.638	0.33
201_S	211_S	0.638	0.33
253_L	317_K	0.638	0.33
200_E	344_A	0.637	0.32
186_T	392_Y	0.636	0.32
76_L	84_E	0.636	0.32
73_V	158_L	0.634	0.32
249_Q	376_R	0.634	0.32
246_L	376_R	0.634	0.32
81_Q	242_R	0.632	0.32
11_F	14_P	0.630	0.32
105_C	147_K	0.630	0.32
319_L	323_S	0.628	0.32
309_A	319_L	0.627	0.32
197_L	380_L	0.626	0.32
338_L	373_L	0.625	0.32
192_E	377_L	0.625	0.32
38_L	349_R	0.625	0.32
306_E	359_L	0.624	0.32
343_S	348_G	0.624	0.32
379_R	386_Q	0.621	0.31
309_A	314_Q	0.620	0.31
116_L	135_G	0.620	0.31
72_E	92_K	0.619	0.31
329_L	332_Q	0.618	0.31
268_G	273_G	0.617	0.31
3_H	9_P	0.617	0.31
42_Y	51_E	0.614	0.31
144_E	154_Q	0.614	0.31
27_H	38_L	0.613	0.31
350_V	358_E	0.609	0.30
4_E	17_S	0.608	0.30
8_D	135_G	0.608	0.30
199_A	211_S	0.608	0.30
257_A	266_L	0.607	0.30
172_K	176_E	0.607	0.30
358_E	365_P	0.606	0.30
266_L	286_L	0.604	0.30
140_F	180_K	0.602	0.30
170_E	363_L	0.602	0.30
95_E	103_K	0.600	0.30
153_F	263_T	0.600	0.30
7_F	12_Q	0.597	0.30
155_I	252_Q	0.596	0.30
290_L	334_I	0.595	0.29
30_F	52_I	0.595	0.29
174_F	239_D	0.593	0.29
166_A	177_R	0.592	0.29
339_L	348_G	0.592	0.29
210_P	296_E	0.592	0.29
102_K	153_F	0.590	0.29
333_R	370_L	0.589	0.29
74_L	149_D	0.588	0.29
361_G	390_P	0.588	0.29
156_R	241_A	0.588	0.29
162_L	204_S	0.587	0.29
29_A	39_P	0.586	0.29
5_I	14_P	0.586	0.29
112_E	141_E	0.586	0.29
97_I	143_L	0.585	0.29
15_P	158_L	0.584	0.29
2_A	104_L	0.583	0.29
107_P	147_K	0.582	0.29
387_V	391_W	0.581	0.29
246_L	380_L	0.581	0.29
1_L	151_A	0.580	0.28
41_D	44_R	0.580	0.28
84_E	213_S	0.579	0.28
291_E	321_P	0.576	0.28
315_L	387_V	0.576	0.28
136_L	279_V	0.575	0.28
23_K	70_I	0.575	0.28
105_C	154_Q	0.574	0.28
74_L	106_A	0.572	0.28
105_C	133_V	0.570	0.28
137_R	181_G	0.569	0.28
111_E	288_A	0.569	0.28
174_F	261_L	0.567	0.28
221_L	381_V	0.566	0.28
211_S	350_V	0.565	0.27
183_L	186_T	0.564	0.27
132_L	135_G	0.563	0.27
298_I	302_I	0.562	0.27
265_S	268_G	0.562	0.27
281_K	285_R	0.561	0.27
251_Q	293_E	0.561	0.27
101_L	131_D	0.561	0.27
106_A	109_R	0.560	0.27
97_I	109_R	0.559	0.27
309_A	317_K	0.558	0.27
337_F	384_N	0.558	0.27
296_E	304_R	0.556	0.27
232_F	380_L	0.556	0.27
116_L	138_G	0.555	0.27
70_I	376_R	0.554	0.27
30_F	237_L	0.553	0.27
45_A	67_R	0.552	0.27
178_L	234_E	0.551	0.27
116_L	142_V	0.549	0.26
98_L	139_I	0.548	0.26
323_S	389_G	0.548	0.26
60_L	253_L	0.548	0.26
317_K	334_I	0.546	0.26
100_L	115_K	0.546	0.26
155_I	162_L	0.544	0.26
195_A	298_I	0.544	0.26
212_P	380_L	0.544	0.26
107_P	289_L	0.543	0.26
353_Q	358_E	0.543	0.26
45_A	145_L	0.542	0.26
102_K	144_E	0.542	0.26
295_V	303_V	0.541	0.26
196_E	250_L	0.540	0.26
21_R	215_K	0.538	0.26
193_A	377_L	0.538	0.26
315_L	327_R	0.536	0.26
105_C	166_A	0.535	0.25
1_L	4_E	0.532	0.25
111_E	209_G	0.530	0.25
218_N	381_V	0.530	0.25
80_R	247_R	0.529	0.25
23_K	269_S	0.529	0.25
93_L	264_R	0.529	0.25
332_Q	339_L	0.528	0.25
79_I	189_W	0.528	0.25
38_L	253_L	0.526	0.25
311_L	319_L	0.525	0.25
251_Q	317_K	0.525	0.25
112_E	247_R	0.524	0.25
248_A	316_L	0.524	0.25
317_K	323_S	0.523	0.25
36_E	138_G	0.523	0.25
39_P	45_A	0.523	0.25
50_K	76_L	0.522	0.25
362_G	366_L	0.521	0.25
192_E	347_L	0.521	0.25
188_K	220_G	0.521	0.25
67_R	70_I	0.520	0.25
152_N	170_E	0.519	0.25
158_L	182_S	0.518	0.24
96_F	146_M	0.518	0.24
35_R	134_D	0.518	0.24
11_F	30_F	0.517	0.24
59_L	155_I	0.515	0.24
30_F	173_K	0.515	0.24
276_P	373_L	0.511	0.24
342_L	386_Q	0.511	0.24
24_E	303_V	0.510	0.24
351_G	356_A	0.510	0.24
34_L	337_F	0.509	0.24
254_I	383_V	0.508	0.24
38_L	142_V	0.507	0.24
45_A	227_W	0.506	0.24
146_M	170_E	0.506	0.24
302_I	388_F	0.504	0.24
224_L	231_E	0.503	0.24
82_Q	148_L	0.502	0.23
186_T	224_L	0.502	0.23
113_V	146_M	0.500	0.23

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4jiuA	1	0.1212	14.3	0.969	Contact Map
3dfzA	2	0.2399	12.5	0.97	Contact Map
1wteA	2	0.2298	8.9	0.972	Contact Map
4qhjA	2	0.1061	6.4	0.974	Contact Map
3h4sE	1	0.2374	5.8	0.974	Contact Map
3fmeA	1	0.2197	5.7	0.974	Contact Map
1gs9A	1	0.3409	5	0.975	Contact Map
3bpjA	2	0.1919	4.9	0.975	Contact Map
4wlrB	1	0.2374	4.4	0.976	Contact Map
4jixA	2	0.1111	4.3	0.976	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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