GREMLIN Database
Utp14 - Utp14 protein
PFAM: PF04615 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_10
Length: 715 (696)
Sequences: 646 (558)
Seq/√Len: 21.1
META: 0.087

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
211_A215_R3.9161.00
557_S560_E3.8551.00
115_K118_E3.7961.00
693_F697_T3.7391.00
119_E122_K3.5461.00
383_F390_R3.5131.00
101_K105_E3.4781.00
128_K132_R3.4011.00
353_K356_A3.3621.00
221_K237_K3.1271.00
202_R206_L3.0891.00
189_L214_F3.0120.99
484_N487_L2.9900.99
381_M387_A2.9770.99
328_D341_D2.9640.99
399_A403_R2.8950.99
669_F672_K2.8510.99
590_K641_D2.8500.99
384_M387_A2.7290.99
383_F386_R2.7130.99
387_A390_R2.7030.99
684_G687_W2.6770.99
690_K694_Q2.6670.99
449_E452_E2.6610.99
219_K231_Y2.6340.98
399_A405_E2.6340.98
330_E334_D2.6330.98
461_D464_E2.5580.98
336_D339_S2.5510.98
395_N399_A2.5050.98
383_F387_A2.5030.98
255_P258_A2.5020.98
22_H26_L2.4060.97
290_K322_I2.3910.97
284_N311_Q2.3580.97
271_R275_E2.3460.97
285_T290_K2.2660.96
540_I546_L2.2560.96
202_R205_E2.2490.96
455_S458_D2.2460.96
187_E202_R2.2420.96
380_S387_A2.2350.96
706_G711_P2.1930.95
377_G380_S2.1850.95
451_E457_E2.1550.95
600_K605_T2.0660.93
46_E50_E2.0660.93
381_M384_M2.0640.93
106_R283_K2.0630.93
183_L187_E2.0350.93
379_L383_F2.0330.93
493_K498_V1.9990.92
376_K387_A1.9990.92
276_E282_H1.9860.92
639_R651_E1.9850.92
641_D651_E1.9760.92
328_D332_D1.9720.91
98_P123_W1.9680.91
454_S457_E1.9640.91
150_T158_F1.9560.91
193_K199_V1.9510.91
335_S338_D1.9290.91
135_H698_K1.9080.90
506_S512_S1.9060.90
398_E401_E1.8950.90
452_E455_S1.8950.90
13_E16_E1.8610.89
314_R317_E1.8610.89
600_K603_D1.8590.89
668_P671_S1.8570.89
703_T709_I1.8530.89
557_S562_D1.8490.89
127_V130_N1.8420.88
214_F218_A1.8380.88
335_S341_D1.8340.88
117_K274_A1.8160.88
43_R47_S1.8140.88
494_T498_V1.8070.87
673_E693_F1.8050.87
494_T497_K1.7980.87
669_F678_S1.7940.87
102_R106_R1.7910.87
198_E202_R1.7870.87
586_F590_K1.7790.86
340_S343_E1.7790.86
588_K592_E1.7770.86
502_V506_S1.7750.86
674_Q687_W1.7600.86
383_F391_R1.7580.86
521_K526_E1.7570.86
678_S700_R1.7470.85
601_E630_K1.7460.85
518_K521_K1.7430.85
514_N517_K1.7280.85
11_E14_D1.7270.85
641_D649_I1.7270.85
291_S304_A1.7180.84
280_L312_L1.7170.84
495_L498_V1.7110.84
632_E635_K1.7040.84
118_E558_D1.7030.84
456_E459_E1.7030.84
287_K616_G1.6990.84
601_E628_L1.6910.83
694_Q700_R1.6890.83
453_S456_E1.6830.83
667_F698_K1.6680.83
267_E589_E1.6630.82
339_S343_E1.6620.82
376_K380_S1.6540.82
329_E332_D1.6520.82
445_K451_E1.6510.82
135_H700_R1.6500.82
558_D561_E1.6330.81
414_E417_E1.6310.81
377_G383_F1.6250.81
113_Y116_T1.6230.81
388_E395_N1.6210.81
215_R633_G1.6200.81
100_P103_E1.6180.81
332_D335_S1.6170.81
354_R357_L1.6140.80
356_A359_E1.6100.80
395_N403_R1.6090.80
43_R46_E1.6080.80
348_D351_E1.6060.80
196_L199_V1.6050.80
663_S670_T1.6040.80
10_S13_E1.5990.80
556_E560_E1.5950.80
641_D684_G1.5920.80
237_K278_M1.5890.79
448_S454_S1.5800.79
674_Q677_R1.5780.79
458_D464_E1.5760.79
312_L315_G1.5760.79
214_F296_G1.5730.79
675_Y679_L1.5710.79
8_D239_K1.5670.78
491_E494_T1.5670.78
355_K406_L1.5670.78
180_E187_E1.5660.78
242_E246_E1.5640.78
508_K515_K1.5580.78
447_D450_E1.5550.78
356_A363_L1.5530.78
8_D11_E1.5420.77
393_E403_R1.5360.77
260_E569_Q1.5320.77
210_R217_E1.5230.76
284_N312_L1.5170.76
187_E198_E1.5130.76
641_D648_I1.5070.76
449_E453_S1.5040.75
385_Q391_R1.5030.75
616_G689_T1.5000.75
699_P706_G1.4970.75
352_E356_A1.4960.75
450_E455_S1.4910.75
514_N521_K1.4900.75
330_E335_S1.4880.75
454_S459_E1.4850.74
232_H244_L1.4770.74
99_L107_L1.4720.74
457_E460_E1.4710.74
113_Y117_K1.4710.74
457_E461_D1.4660.74
454_S458_D1.4640.73
57_S61_K1.4620.73
639_R648_I1.4480.73
559_D562_D1.4460.72
113_Y668_P1.4390.72
217_E278_M1.4360.72
403_R406_L1.4350.72
202_R220_A1.4320.72
604_L627_F1.4310.72
379_L387_A1.4260.71
427_R686_E1.4260.71
451_E458_D1.4250.71
399_A402_L1.4170.71
666_P711_P1.4170.71
400_E403_R1.4160.71
233_R238_E1.3970.70
586_F639_R1.3960.70
168_I171_L1.3950.70
460_E464_E1.3940.70
668_P711_P1.3920.69
511_K515_K1.3920.69
498_V507_S1.3900.69
687_W700_R1.3850.69
207_R211_A1.3740.68
441_S445_K1.3660.68
99_L289_A1.3620.68
538_A541_D1.3600.68
398_E403_R1.3580.68
660_Y679_L1.3580.68
603_D704_K1.3520.67
395_N398_E1.3520.67
12_D15_D1.3460.67
590_K639_R1.3450.67
448_S456_E1.3390.66
377_G387_A1.3370.66
382_K386_R1.3350.66
123_W586_F1.3350.66
333_D339_S1.3220.65
541_D548_L1.3180.65
353_K357_L1.3120.65
377_G390_R1.3090.65
357_L360_L1.3070.64
115_K120_L1.3060.64
135_H189_L1.3040.64
650_N665_L1.3020.64
356_A390_R1.3000.64
447_D452_E1.3000.64
670_T700_R1.3000.64
666_P706_G1.2980.64
54_N101_K1.2960.64
426_G430_F1.2950.64
584_A667_F1.2900.63
225_K256_E1.2880.63
133_A138_F1.2850.63
496_K516_L1.2820.63
210_R578_A1.2700.62
233_R389_A1.2690.62
427_R430_F1.2670.62
214_F217_E1.2650.62
491_E498_V1.2630.62
219_K650_N1.2630.62
448_S458_D1.2560.61
567_F572_L1.2560.61
220_A607_P1.2530.61
380_S385_Q1.2480.61
480_E485_P1.2440.61
21_K29_I1.2430.60
406_L410_D1.2420.60
635_K638_K1.2400.60
603_D627_F1.2390.60
172_L206_L1.2370.60
459_E462_K1.2370.60
378_L384_M1.2370.60
293_K311_Q1.2320.60
354_R360_L1.2320.60
586_F641_D1.2260.59
212_L217_E1.2230.59
548_L552_S1.2140.59
353_K363_L1.2120.58
266_L321_K1.2110.58
301_D697_T1.2110.58
573_I668_P1.2110.58
458_D463_S1.2090.58
450_E457_E1.2090.58
614_G687_W1.2070.58
328_D331_D1.2070.58
454_S463_S1.2060.58
670_T674_Q1.2060.58
456_E461_D1.2030.58
192_N199_V1.2010.58
359_E560_E1.1980.58
515_K518_K1.1970.58
674_Q694_Q1.1930.57
197_E652_K1.1910.57
187_E206_L1.1830.57
342_S558_D1.1810.56
457_E463_S1.1720.56
77_S281_K1.1620.55
412_E417_E1.1590.55
448_S451_E1.1570.55
477_E483_E1.1560.55
491_E496_K1.1530.55
484_N488_A1.1510.54
410_D413_S1.1490.54
380_S384_M1.1470.54
301_D677_R1.1460.54
508_K512_S1.1460.54
258_A284_N1.1450.54
454_S461_D1.1440.54
573_I576_A1.1410.54
684_G699_P1.1370.54
393_E398_E1.1330.53
284_N293_K1.1320.53
376_K382_K1.1320.53
586_F648_I1.1300.53
213_M217_E1.1280.53
412_E415_S1.1270.53
420_E441_S1.1220.53
374_P385_Q1.1220.53
362_E507_S1.1210.53
497_K503_S1.1210.53
498_V502_V1.1180.52
471_A474_A1.1130.52
276_E590_K1.1110.52
104_Q112_A1.1100.52
331_D342_S1.1100.52
162_T208_K1.1090.52
353_K360_L1.1080.52
232_H686_E1.1080.52
580_D607_P1.1070.52
662_V675_Y1.1060.52
401_E406_L1.1060.52
302_E430_F1.1020.51
477_E485_P1.0980.51
560_E565_E1.0950.51
604_L629_K1.0930.51
455_S459_E1.0920.51
233_R397_E1.0880.50
455_S460_E1.0870.50
305_R312_L1.0840.50
199_V206_L1.0800.50
204_A208_K1.0800.50
376_K381_M1.0790.50
453_S460_E1.0780.50
397_E400_E1.0730.49
176_G675_Y1.0700.49
506_S511_K1.0690.49
663_S667_F1.0690.49
333_D341_D1.0680.49
526_E529_K1.0680.49
44_S50_E1.0670.49
666_P699_P1.0630.49
473_A478_E1.0620.49
10_S14_D1.0590.48
677_R687_W1.0590.48
475_E478_E1.0580.48
505_E508_K1.0570.48
696_L706_G1.0550.48
112_A220_A1.0550.48
679_L688_N1.0500.48
241_K244_L1.0490.48
150_T153_P1.0460.48
197_E241_K1.0430.47
453_S463_S1.0390.47
123_W127_V1.0380.47
418_E561_E1.0340.47
519_S522_K1.0330.47
394_E397_E1.0320.47
210_R274_A1.0320.47
282_H590_K1.0300.46
466_K469_S1.0300.46
570_R574_K1.0280.46
491_E500_V1.0270.46
492_K498_V1.0250.46
332_D439_E1.0240.46
130_N669_F1.0220.46
243_A310_E1.0150.45
236_K240_E1.0140.45
231_Y235_L1.0130.45
403_R413_S1.0120.45
238_E704_K1.0120.45
290_K418_E1.0090.45
692_A701_V1.0090.45
202_R214_F1.0060.45
513_K523_S1.0030.45
524_A527_K1.0020.45
275_E278_M1.0010.45
102_R687_W1.0000.44
276_E321_K0.9970.44
400_E407_E0.9970.44
706_G709_I0.9960.44
375_E390_R0.9930.44
449_E454_S0.9930.44
101_K278_M0.9920.44
590_K651_E0.9920.44
393_E397_E0.9910.44
231_Y248_E0.9890.44
503_S522_K0.9890.44
449_E458_D0.9880.44
378_L402_L0.9880.44
355_K361_K0.9860.44
135_H702_V0.9820.43
506_S519_S0.9810.43
515_K522_K0.9790.43
207_R215_R0.9750.43
109_R123_W0.9750.43
42_E45_E0.9750.43
514_N519_S0.9730.43
457_E464_E0.9720.43
657_A670_T0.9710.43
387_A391_R0.9710.43
520_K523_S0.9690.42
210_R582_V0.9650.42
9_D13_E0.9630.42
398_E402_L0.9610.42
388_E399_A0.9600.42
335_S347_D0.9590.42
46_E52_E0.9590.42
15_D340_S0.9580.42
45_E50_E0.9570.42
381_M427_R0.9560.42
461_D465_D0.9560.42
498_V505_E0.9560.42
473_A480_E0.9560.42
80_K93_K0.9550.42
440_A444_K0.9550.42
283_K575_E0.9540.41
25_L29_I0.9540.41
384_M390_R0.9540.41
377_G381_M0.9530.41
491_E507_S0.9520.41
217_E652_K0.9520.41
606_L613_G0.9500.41
616_G674_Q0.9490.41
426_G433_G0.9480.41
689_T700_R0.9480.41
375_E380_S0.9480.41
503_S506_S0.9480.41
382_K385_Q0.9450.41
120_L298_A0.9450.41
304_A578_A0.9430.41
598_K601_E0.9420.41
599_P665_L0.9410.41
381_M390_R0.9410.41
329_E335_S0.9400.41
520_K708_I0.9390.40
208_K211_A0.9380.40
514_N522_K0.9370.40
454_S460_E0.9370.40
337_E340_S0.9360.40
127_V635_K0.9360.40
380_S383_F0.9350.40
587_E669_F0.9350.40
290_K308_M0.9340.40
396_D402_L0.9340.40
116_T677_R0.9310.40
496_K499_E0.9290.40
394_E398_E0.9270.40
127_V131_R0.9260.40
52_E289_A0.9260.40
104_Q128_K0.9250.40
22_H28_A0.9250.40
378_L385_Q0.9240.40
361_K504_K0.9240.40
449_E455_S0.9240.40
208_K680_R0.9230.39
674_Q689_T0.9220.39
391_R394_E0.9220.39
513_K520_K0.9210.39
15_D480_E0.9200.39
281_K304_A0.9190.39
382_K397_E0.9180.39
106_R202_R0.9180.39
241_K700_R0.9170.39
95_L107_L0.9140.39
144_E166_Q0.9130.39
139_P606_L0.9110.39
463_S522_K0.9110.39
130_N278_M0.9100.39
508_K519_S0.9100.39
91_K325_K0.9070.38
94_T200_K0.9060.38
22_H25_L0.9040.38
377_G384_M0.9030.38
447_D451_E0.9020.38
674_Q700_R0.9020.38
199_V308_M0.8990.38
449_E457_E0.8990.38
97_A573_I0.8990.38
402_L406_L0.8980.38
187_E212_L0.8970.38
476_E479_A0.8950.38
196_L575_E0.8900.37
189_L192_N0.8880.37
276_E569_Q0.8860.37
420_E479_A0.8860.37
382_K390_R0.8850.37
363_L366_E0.8840.37
540_I545_V0.8840.37
454_S462_K0.8840.37
385_Q389_A0.8810.37
28_A232_H0.8810.37
381_M389_A0.8810.37
276_E280_L0.8790.37
644_L647_V0.8790.37
167_E183_L0.8780.37
207_R674_Q0.8770.37
137_V702_V0.8750.36
233_R680_R0.8740.36
328_D334_D0.8730.36
172_L175_S0.8730.36
132_R670_T0.8720.36
29_I490_R0.8710.36
164_L237_K0.8700.36
300_Y312_L0.8690.36
172_L307_A0.8690.36
332_D339_S0.8690.36
349_E361_K0.8680.36
508_K511_K0.8640.36
661_Q665_L0.8630.36
523_S526_E0.8610.36
458_D461_D0.8600.36
569_Q576_A0.8600.36
330_E339_S0.8600.36
386_R389_A0.8590.35
681_T685_P0.8590.35
450_E458_D0.8580.35
345_D413_S0.8580.35
384_M389_A0.8560.35
122_K594_V0.8520.35
527_K531_K0.8500.35
168_I644_L0.8490.35
676_E699_P0.8480.35
291_S311_Q0.8470.35
511_K519_S0.8470.35
86_L231_Y0.8460.35
232_H236_K0.8460.35
99_L607_P0.8430.34
120_L240_E0.8430.34
362_E366_E0.8410.34
510_A515_K0.8400.34
282_H641_D0.8380.34
333_D344_D0.8330.34
171_L175_S0.8300.34
608_G612_W0.8300.34
609_W612_W0.8300.34
247_F258_A0.8290.34
213_M674_Q0.8290.34
199_V204_A0.8260.33
151_L224_K0.8260.33
570_R583_V0.8250.33
337_E464_E0.8230.33
548_L551_P0.8230.33
161_R669_F0.8230.33
483_E560_E0.8210.33
68_L107_L0.8210.33
503_S507_S0.8210.33
86_L137_V0.8210.33
171_L585_E0.8200.33
608_G614_G0.8190.33
609_W614_G0.8190.33
409_E415_S0.8190.33
481_E485_P0.8190.33
648_I651_E0.8170.33
356_A360_L0.8160.33
162_T588_K0.8150.33
357_L363_L0.8140.33
196_L308_M0.8130.33
517_K540_I0.8120.33
331_D481_E0.8110.33
379_L390_R0.8100.33
456_E460_E0.8090.32
510_A513_K0.8090.32
699_P711_P0.8080.32
475_E479_A0.8080.32
437_A453_S0.8030.32
112_A674_Q0.8030.32
415_S443_K0.8020.32
249_A575_E0.8000.32
18_D106_R0.8000.32
662_V689_T0.7970.32
34_G686_E0.7950.32
672_K677_R0.7950.32
297_R309_Q0.7940.32
105_E675_Y0.7930.32
328_D649_I0.7930.32
354_R361_K0.7930.32
201_A254_D0.7920.31
513_K516_L0.7920.31
499_E502_V0.7910.31
682_P687_W0.7900.31
104_Q207_R0.7900.31
452_E458_D0.7890.31
450_E454_S0.7880.31
655_K671_S0.7860.31
71_L270_E0.7850.31
380_S390_R0.7850.31
126_T312_L0.7840.31
120_L312_L0.7840.31
161_R257_A0.7820.31
601_E631_V0.7820.31
98_P586_F0.7810.31
140_L665_L0.7800.31
43_R50_E0.7790.31
15_D325_K0.7770.31
590_K649_I0.7760.31
450_E453_S0.7760.31
281_K680_R0.7740.30
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504_K509_A0.6280.23
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640_K644_L0.6270.23
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399_A700_R0.6260.23
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24_K66_D0.6020.22
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101_K291_S0.6010.22
375_E387_A0.6000.22
452_E457_E0.6000.22
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207_R700_R0.6000.22
397_E405_E0.5990.22
134_E201_A0.5990.22
204_A592_E0.5990.22
476_E483_E0.5980.22
66_D159_K0.5960.21
391_R408_G0.5950.21
671_S709_I0.5950.21
517_K522_K0.5950.21
330_E336_D0.5940.21
430_F594_V0.5940.21
493_K496_K0.5940.21
611_S661_Q0.5930.21
231_Y399_A0.5920.21
233_R648_I0.5920.21
537_E541_D0.5920.21
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280_L283_K0.5900.21
448_S460_E0.5900.21
42_E46_E0.5900.21
669_F692_A0.5900.21
538_A546_L0.5890.21
518_K534_K0.5880.21
67_L385_Q0.5880.21
394_E413_S0.5860.21
21_K31_S0.5860.21
286_S300_Y0.5850.21
501_F515_K0.5850.21
355_K378_L0.5840.21
83_L107_L0.5820.21
215_R220_A0.5820.21
438_S441_S0.5810.21
299_K305_R0.5800.21
307_A618_K0.5800.21
210_R648_I0.5790.21
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162_T687_W0.5760.21
25_L95_L0.5760.21
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512_S516_L0.5740.20
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210_R324_G0.5720.20
405_E409_E0.5720.20
379_L400_E0.5700.20
218_A298_A0.5690.20
492_K509_A0.5680.20
248_E251_A0.5680.20
465_D469_S0.5670.20
296_G686_E0.5660.20
285_T297_R0.5660.20
35_K543_S0.5640.20
337_E412_E0.5640.20
83_L235_L0.5630.20
107_L320_R0.5620.20
333_D589_E0.5620.20
522_K541_D0.5610.20
163_E281_K0.5600.20
355_K521_K0.5600.20
668_P709_I0.5590.20
376_K385_Q0.5590.20
237_K647_V0.5590.20
397_E478_E0.5580.20
529_K532_K0.5580.20
149_A404_R0.5570.20
290_K696_L0.5570.20
657_A685_P0.5570.20
335_S339_S0.5570.20
384_M572_L0.5570.20
16_E483_E0.5560.20
353_K523_S0.5560.20
134_E205_E0.5550.20
518_K522_K0.5540.20
506_S516_L0.5530.20
660_Y686_E0.5530.20
332_D522_K0.5530.20
219_K374_P0.5530.20
211_A674_Q0.5520.20
125_P311_Q0.5510.19
405_E416_E0.5510.19
64_L570_R0.5500.19
449_E456_E0.5500.19
111_A669_F0.5500.19
291_S295_R0.5500.19
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124_D321_K0.5500.19
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670_T694_Q0.5480.19
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290_K559_D0.5470.19
666_P709_I0.5460.19
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165_E169_F0.5440.19
666_P669_F0.5430.19
219_K266_L0.5420.19
215_R662_V0.5420.19
504_K507_S0.5410.19
96_E517_K0.5410.19
132_R168_I0.5400.19
66_D126_T0.5400.19
216_E670_T0.5400.19
660_Y675_Y0.5390.19
194_M211_A0.5390.19
160_P189_L0.5390.19
591_R628_L0.5380.19
387_A401_E0.5370.19
541_D546_L0.5360.19
190_E221_K0.5350.19
175_S285_T0.5330.19
253_T381_M0.5330.19
593_V597_E0.5330.19
445_K455_S0.5320.19
347_D486_W0.5320.19
307_A312_L0.5320.19
218_A660_Y0.5320.19
378_L386_R0.5320.19
455_S462_K0.5300.19
160_P165_E0.5300.19
348_D355_K0.5290.19
118_E622_K0.5290.19
47_S51_S0.5280.19
139_P164_L0.5280.19
161_R306_Q0.5280.19
250_L258_A0.5270.18
153_P231_Y0.5270.18
366_E445_K0.5270.18
12_D16_E0.5270.18
653_R658_A0.5270.18
451_E455_S0.5270.18
45_E53_F0.5270.18
232_H679_L0.5260.18
268_K712_I0.5260.18
469_S474_A0.5250.18
586_F606_L0.5250.18
191_L281_K0.5240.18
30_S311_Q0.5230.18
384_M660_Y0.5230.18
689_T693_F0.5230.18
112_A202_R0.5220.18
447_D457_E0.5220.18
442_K447_D0.5220.18
681_T688_N0.5220.18
537_E561_E0.5220.18
398_E588_K0.5210.18
50_E54_N0.5210.18
503_S508_K0.5210.18
272_A297_R0.5210.18
281_K681_T0.5200.18
391_R400_E0.5190.18
77_S115_K0.5190.18
290_K584_A0.5190.18
501_F556_E0.5190.18
472_E479_A0.5180.18
277_R577_F0.5170.18
233_R675_Y0.5170.18
392_K395_N0.5160.18
518_K538_A0.5160.18
389_A393_E0.5160.18
172_L573_I0.5150.18
303_E306_Q0.5150.18
440_A451_E0.5150.18
639_R647_V0.5150.18
248_E269_L0.5140.18
687_W704_K0.5130.18
651_E704_K0.5120.18
37_R105_E0.5120.18
286_S313_R0.5120.18
359_E381_M0.5120.18
512_S533_K0.5120.18
230_K233_R0.5110.18
614_G674_Q0.5100.18
282_H651_E0.5100.18
191_L379_L0.5100.18
449_E555_E0.5080.18
275_E304_A0.5080.18
443_K452_E0.5080.18
21_K644_L0.5080.18
391_R667_F0.5080.18
243_A643_K0.5070.18
135_H655_K0.5060.18
109_R222_R0.5040.18
312_L321_K0.5030.18
372_E378_L0.5030.18
586_F607_P0.5030.18
447_D456_E0.5020.17
357_L411_E0.5010.17
103_E315_G0.5010.17
110_E171_L0.5010.17
280_L315_G0.5010.17
236_K284_N0.5010.17
318_L590_K0.5000.17
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4ui9I 1 0.014 21.7 0.984 Contact Map
4gyiA 1 0.0084 9.1 0.986 Contact Map
4fp9B 2 0.0084 7.8 0.987 Contact Map
2mvmA 1 0.0573 6.7 0.987 Contact Map
4dnhA 1 0.0923 6.4 0.987 Contact Map
2iu1A 1 0.042 5.3 0.988 Contact Map
1uasA 1 0.1594 5 0.988 Contact Map
4ux3B 1 0.0294 5 0.988 Contact Map
4j4aA 3 0.0378 4.8 0.988 Contact Map
4rgwB 1 0 4.7 0.988 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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