Q9HSZ7 - HALSA - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

Q9HSZ7 - Uncharacterized protein

UniProt:	Q9HSZ7	Sequences: MLGGWRYRLGSIAGVCLLTALAVGVANSPTGQALTGALPVFAQLAADPPGVAEGLLEVSTTVCVVAVACLPLYKPRPRRVLDVVVLAQKRVVVALFALAAIGYFDYTYRLPRTTLLAVTPVLLVAVPALFVWIRRRPTPTAASRTIVVGDTLDEIERLVADIDHPLYGYVCPTVVPRTPDAAPPHPAVADGGSDARALNDHDRLGGLSRIEDVLVAHDIDTVVLAFERTDRAEFFGALDACYEHGVAAKVHRDHADRVLTADDDVGTLATVDVEPWDVQDYVLKRGFDIAFSAAGLLLLSPVILAITGAIKLDDGGTVLYNQERTAAFGETFEVYKFRSMVENAEDATGATISDEDAGGVDPRVTRVGRVLRQTHLDEIPQLWAVLKGDMSVVGPRPERPELDSDIQTGVVDWRKRWFVRPGLTGLAQVNDVTGADPVEKLRYDLQYVKKQSIWFDMKVVIRQVWKVVVDAVEAFRR	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	477 (434)
Sequences:	4334 (3523)
Seq/√Len:	169.1

ECOLI - WCAJ
BACSU - EPSL
HALSA - Q9HSZ7

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
306_I	376_L	5.802	1.00
309_A	367_V	5.422	1.00
285_R	289_I	5.347	1.00
339_S	371_L	5.104	1.00
313_D	366_R	4.568	1.00
323_E	331_T	4.488	1.00
296_L	383_W	4.390	1.00
385_V	423_L	4.335	1.00
323_E	333_E	4.136	1.00
321_N	333_E	3.804	1.00
287_F	291_F	3.609	1.00
439_E	442_R	3.527	1.00
306_I	371_L	3.470	1.00
370_V	374_T	3.431	1.00
392_V	460_V	3.189	1.00
305_A	309_A	2.978	1.00
144_R	170_V	2.714	1.00
317_T	342_E	2.660	1.00
92_V	119_T	2.654	1.00
343_N	347_A	2.618	1.00
293_A	386_L	2.571	1.00
426_L	430_N	2.546	1.00
382_L	392_V	2.479	1.00
292_S	296_L	2.428	1.00
295_G	299_L	2.422	1.00
291_F	392_V	2.413	1.00
310_I	313_D	2.386	1.00
325_T	331_T	2.369	1.00
321_N	335_Y	2.331	1.00
311_K	318_V	2.295	1.00
292_S	386_L	2.216	1.00
307_T	318_V	2.215	1.00
319_L	335_Y	2.211	1.00
382_L	423_L	2.170	1.00
341_V	347_A	2.135	1.00
221_T	249_K	2.119	1.00
144_R	220_D	2.100	1.00
367_V	371_L	2.093	1.00
458_K	462_R	2.050	1.00
360_V	369_R	2.036	1.00
175_V	213_V	2.024	1.00
311_K	316_G	2.016	1.00
446_Q	450_K	2.014	1.00
343_N	346_D	2.008	1.00
335_Y	387_K	1.990	1.00
399_R	402_L	1.971	1.00
398_E	402_L	1.955	1.00
212_D	216_A	1.951	1.00
299_L	303_I	1.923	1.00
398_E	406_I	1.886	1.00
406_I	437_P	1.837	1.00
325_T	403_D	1.831	1.00
136_R	139_P	1.815	1.00
289_I	292_S	1.814	1.00
287_F	453_I	1.813	1.00
146_I	175_V	1.808	1.00
393_V	424_T	1.806	1.00
213_V	217_H	1.787	1.00
300_S	304_L	1.783	1.00
142_A	170_V	1.777	1.00
304_L	308_G	1.773	1.00
371_L	374_T	1.760	1.00
159_V	174_V	1.748	1.00
383_W	387_K	1.747	1.00
145_T	169_Y	1.724	1.00
296_L	300_S	1.713	1.00
306_I	337_F	1.711	1.00
373_Q	470_D	1.707	1.00
31_G	125_A	1.691	1.00
308_G	312_L	1.689	1.00
303_I	319_L	1.689	1.00
293_A	297_L	1.673	1.00
402_L	406_I	1.671	1.00
303_I	337_F	1.610	1.00
371_L	376_L	1.608	1.00
288_D	391_S	1.602	1.00
436_D	439_E	1.592	1.00
295_G	382_L	1.589	1.00
147_V	155_I	1.584	1.00
206_G	209_R	1.584	1.00
364_V	369_R	1.576	1.00
352_I	402_L	1.560	1.00
24_G	28_S	1.557	1.00
326_A	421_P	1.552	1.00
426_L	446_Q	1.542	1.00
289_I	293_A	1.539	1.00
347_A	350_A	1.519	1.00
320_Y	345_E	1.518	1.00
301_P	304_L	1.514	1.00
209_R	212_D	1.514	1.00
173_T	205_G	1.512	1.00
379_I	382_L	1.501	1.00
295_G	392_V	1.487	1.00
67_V	72_L	1.482	1.00
398_E	403_D	1.476	1.00
341_V	362_P	1.459	1.00
398_E	437_P	1.457	1.00
23_V	129_L	1.450	1.00
291_F	295_G	1.446	1.00
299_L	302_V	1.442	1.00
103_Y	112_R	1.419	1.00
39_P	112_R	1.415	1.00
398_E	440_K	1.409	1.00
147_V	159_V	1.392	1.00
400_P	404_S	1.389	1.00
83_V	134_R	1.359	1.00
426_L	450_K	1.351	1.00
264_D	267_T	1.342	1.00
335_Y	384_A	1.336	1.00
155_I	174_V	1.324	1.00
462_R	466_K	1.315	1.00
139_P	168_G	1.300	1.00
345_E	349_G	1.299	1.00
419_V	448_V	1.290	1.00
399_R	437_P	1.281	1.00
300_S	303_I	1.280	1.00
214_L	246_V	1.280	1.00
151_T	155_I	1.277	1.00
39_P	113_T	1.269	1.00
375_H	433_T	1.260	1.00
28_S	122_L	1.235	1.00
465_W	469_V	1.233	1.00
407_Q	414_R	1.232	1.00
432_V	443_Y	1.227	1.00
285_R	292_S	1.223	1.00
437_P	440_K	1.213	1.00
306_I	309_A	1.208	1.00
427_A	434_G	1.205	1.00
432_V	439_E	1.205	1.00
88_Q	123_L	1.200	1.00
269_A	273_V	1.198	1.00
413_W	427_A	1.185	1.00
320_Y	399_R	1.180	1.00
27_N	129_L	1.175	1.00
399_R	406_I	1.175	1.00
215_V	244_H	1.169	1.00
102_G	105_D	1.169	1.00
402_L	437_P	1.160	1.00
27_N	125_A	1.159	1.00
309_A	312_L	1.156	1.00
21_L	24_G	1.153	1.00
382_L	460_V	1.152	1.00
467_V	470_D	1.149	1.00
453_I	457_M	1.145	1.00
393_V	460_V	1.144	1.00
287_F	457_M	1.143	1.00
27_N	31_G	1.138	1.00
147_V	174_V	1.137	1.00
146_I	173_T	1.135	1.00
31_G	35_T	1.128	1.00
341_V	344_A	1.126	1.00
313_D	365_T	1.124	1.00
150_D	176_P	1.123	1.00
399_R	403_D	1.122	1.00
436_D	440_K	1.122	1.00
344_A	351_T	1.120	1.00
319_L	383_W	1.119	1.00
303_I	379_I	1.113	1.00
427_A	433_T	1.113	1.00
211_E	240_A	1.110	1.00
398_E	413_W	1.105	1.00
457_M	461_I	1.097	1.00
427_A	432_V	1.096	1.00
63_C	67_V	1.093	1.00
433_T	440_K	1.091	1.00
150_D	155_I	1.088	1.00
302_V	306_I	1.087	1.00
370_V	376_L	1.084	1.00
105_D	112_R	1.082	1.00
434_G	471_A	1.081	1.00
136_R	141_A	1.078	1.00
329_G	417_W	1.071	1.00
352_I	399_R	1.068	1.00
287_F	460_V	1.068	1.00
305_A	308_G	1.057	0.99
213_V	219_I	1.055	0.99
413_W	440_K	1.054	0.99
401_E	405_D	1.051	0.99
398_E	441_L	1.050	0.99
159_V	171_C	1.047	0.99
214_L	241_C	1.043	0.99
147_V	225_A	1.043	0.99
392_V	423_L	1.040	0.99
289_I	382_L	1.039	0.99
413_W	417_W	1.039	0.99
415_K	449_K	1.033	0.99
351_T	355_E	1.032	0.99
172_P	219_I	1.031	0.99
283_L	287_F	1.030	0.99
352_I	398_E	1.029	0.99
398_E	427_A	1.023	0.99
375_H	451_Q	1.019	0.99
351_T	354_D	1.018	0.99
398_E	416_R	1.015	0.99
383_W	389_D	1.007	0.99
113_T	117_A	1.007	0.99
284_K	288_D	1.007	0.99
352_I	435_A	1.003	0.99
465_W	471_A	1.002	0.99
416_R	440_K	0.999	0.99
24_G	31_G	0.998	0.99
286_G	289_I	0.995	0.99
282_V	286_G	0.992	0.99
84_V	127_P	0.991	0.99
117_A	121_V	0.990	0.99
102_G	112_R	0.989	0.99
467_V	472_V	0.988	0.99
302_V	379_I	0.987	0.99
306_I	310_I	0.981	0.99
122_L	126_V	0.981	0.99
460_V	467_V	0.979	0.99
438_V	442_R	0.976	0.99
303_I	383_W	0.973	0.99
311_K	314_D	0.968	0.99
24_G	35_T	0.968	0.99
28_S	31_G	0.967	0.99
398_E	433_T	0.965	0.99
348_T	351_T	0.965	0.99
350_A	402_L	0.965	0.99
146_I	219_I	0.964	0.99
222_V	241_C	0.962	0.99
24_G	27_N	0.961	0.99
351_T	362_P	0.961	0.99
310_I	367_V	0.954	0.99
322_Q	399_R	0.953	0.99
66_A	70_L	0.952	0.99
313_D	367_V	0.951	0.99
375_H	431_D	0.947	0.99
375_H	440_K	0.943	0.99
159_V	201_H	0.943	0.99
323_E	401_E	0.943	0.99
95_L	119_T	0.943	0.99
402_L	435_A	0.941	0.99
398_E	401_E	0.937	0.99
461_I	465_W	0.935	0.99
297_L	300_S	0.934	0.99
91_V	123_L	0.931	0.99
366_R	369_R	0.922	0.99
348_T	401_E	0.919	0.99
332_F	390_M	0.916	0.99
66_A	90_R	0.914	0.98
136_R	168_G	0.911	0.98
291_F	460_V	0.909	0.98
417_W	434_G	0.909	0.98
426_L	455_F	0.904	0.98
413_W	437_P	0.903	0.98
432_V	435_A	0.901	0.98
433_T	437_P	0.901	0.98
427_A	440_K	0.897	0.98
401_E	406_I	0.889	0.98
353_S	402_L	0.889	0.98
375_H	432_V	0.888	0.98
350_A	354_D	0.887	0.98
31_G	121_V	0.884	0.98
304_L	307_T	0.877	0.98
70_L	90_R	0.876	0.98
29_P	60_T	0.876	0.98
431_D	451_Q	0.875	0.98
146_I	213_V	0.873	0.98
414_R	417_W	0.873	0.98
348_T	427_A	0.872	0.98
123_L	127_P	0.872	0.98
205_G	209_R	0.872	0.98
310_I	314_D	0.872	0.98
403_D	417_W	0.870	0.98
309_A	313_D	0.868	0.98
399_R	440_K	0.866	0.98
413_W	441_L	0.866	0.98
384_A	389_D	0.862	0.98
235_F	239_D	0.860	0.98
113_T	116_L	0.860	0.98
402_L	417_W	0.859	0.98
426_L	443_Y	0.858	0.98
299_L	382_L	0.858	0.98
204_L	213_V	0.857	0.98
325_T	399_R	0.857	0.98
434_G	440_K	0.855	0.98
290_A	294_A	0.848	0.98
156_E	160_A	0.847	0.98
348_T	402_L	0.844	0.97
434_G	437_P	0.843	0.97
289_I	386_L	0.842	0.97
311_K	315_G	0.840	0.97
350_A	353_S	0.838	0.97
402_L	443_Y	0.836	0.97
60_T	64_V	0.835	0.97
105_D	111_P	0.835	0.97
52_A	56_L	0.832	0.97
425_G	440_K	0.831	0.97
352_I	437_P	0.831	0.97
83_V	130_F	0.830	0.97
144_R	172_P	0.827	0.97
402_L	427_A	0.826	0.97
402_L	433_T	0.824	0.97
284_K	391_S	0.822	0.97
36_G	39_P	0.822	0.97
325_T	400_P	0.821	0.97
430_N	443_Y	0.819	0.97
86_L	89_K	0.818	0.97
400_P	403_D	0.815	0.97
34_L	125_A	0.812	0.97
287_F	392_V	0.806	0.97
276_W	281_Y	0.806	0.97
345_E	399_R	0.804	0.97
319_L	333_E	0.803	0.97
63_C	94_A	0.803	0.97
416_R	437_P	0.803	0.97
129_L	133_I	0.802	0.97
153_D	302_V	0.799	0.96
301_P	305_A	0.797	0.96
308_G	311_K	0.797	0.96
178_T	182_A	0.795	0.96
398_E	435_A	0.794	0.96
432_V	437_P	0.794	0.96
406_I	416_R	0.791	0.96
126_V	129_L	0.791	0.96
214_L	222_V	0.790	0.96
280_D	451_Q	0.788	0.96
144_R	218_D	0.786	0.96
355_E	398_E	0.786	0.96
141_A	168_G	0.785	0.96
322_Q	416_R	0.784	0.96
33_A	37_A	0.784	0.96
76_R	136_R	0.780	0.96
348_T	352_I	0.780	0.96
199_N	202_D	0.780	0.96
331_T	400_P	0.778	0.96
91_V	122_L	0.778	0.96
96_F	100_A	0.778	0.96
145_T	223_V	0.773	0.96
130_F	134_R	0.772	0.96
211_E	215_V	0.769	0.96
349_G	352_I	0.769	0.96
367_V	370_V	0.768	0.96
158_L	223_V	0.765	0.95
287_F	290_A	0.764	0.95
82_D	85_V	0.764	0.95
71_P	74_K	0.764	0.95
143_S	221_T	0.764	0.95
35_T	39_P	0.763	0.95
165_P	168_G	0.762	0.95
437_P	441_L	0.761	0.95
85_V	89_K	0.759	0.95
430_N	433_T	0.758	0.95
157_R	161_D	0.758	0.95
52_A	110_L	0.756	0.95
283_L	286_G	0.756	0.95
126_V	130_F	0.755	0.95
149_G	225_A	0.755	0.95
146_I	204_L	0.750	0.95
322_Q	334_V	0.749	0.95
341_V	364_V	0.748	0.95
427_A	437_P	0.748	0.95
430_N	462_R	0.748	0.95
27_N	126_V	0.748	0.95
177_R	233_E	0.746	0.95
334_V	339_S	0.745	0.95
403_D	406_I	0.745	0.95
241_C	248_A	0.744	0.95
431_D	435_A	0.743	0.95
177_R	205_G	0.739	0.95
399_R	435_A	0.738	0.95
80_V	131_V	0.737	0.94
197_A	200_D	0.733	0.94
173_T	204_L	0.732	0.94
435_A	440_K	0.729	0.94
352_I	355_E	0.724	0.94
325_T	402_L	0.724	0.94
427_A	472_V	0.721	0.94
263_D	272_D	0.721	0.94
398_E	417_W	0.719	0.94
230_D	233_E	0.718	0.94
125_A	129_L	0.717	0.94
348_T	399_R	0.716	0.94
155_I	176_P	0.713	0.93
350_A	399_R	0.712	0.93
415_K	418_F	0.711	0.93
435_A	443_Y	0.710	0.93
352_I	406_I	0.709	0.93
310_I	318_V	0.708	0.93
350_A	401_E	0.707	0.93
470_D	473_E	0.706	0.93
314_D	367_V	0.704	0.93
348_T	398_E	0.704	0.93
150_D	177_R	0.702	0.93
76_R	80_V	0.700	0.93
398_E	434_G	0.699	0.93
155_I	225_A	0.698	0.93
406_I	435_A	0.696	0.93
425_G	441_L	0.694	0.93
398_E	411_V	0.693	0.92
399_R	433_T	0.691	0.92
347_A	427_A	0.688	0.92
92_V	123_L	0.687	0.92
105_D	108_Y	0.686	0.92
212_D	215_V	0.685	0.92
303_I	382_L	0.685	0.92
311_K	317_T	0.685	0.92
80_V	84_V	0.685	0.92
345_E	348_T	0.681	0.92
425_G	428_Q	0.680	0.92
343_N	362_P	0.679	0.92
236_G	240_A	0.679	0.92
433_T	451_Q	0.677	0.92
352_I	416_R	0.677	0.92
432_V	440_K	0.677	0.92
432_V	472_V	0.674	0.91
454_W	457_M	0.671	0.91
56_L	60_T	0.671	0.91
227_E	230_D	0.670	0.91
321_N	334_V	0.670	0.91
407_Q	411_V	0.667	0.91
38_L	54_G	0.667	0.91
223_V	270_T	0.666	0.91
111_P	115_L	0.665	0.91
34_L	121_V	0.662	0.91
124_V	127_P	0.661	0.91
352_I	403_D	0.659	0.91
417_W	440_K	0.658	0.90
446_Q	455_F	0.656	0.90
210_I	214_L	0.655	0.90
316_G	342_E	0.655	0.90
413_W	434_G	0.655	0.90
306_I	367_V	0.655	0.90
399_R	413_W	0.655	0.90
198_L	201_H	0.652	0.90
174_V	203_R	0.652	0.90
30_T	33_A	0.651	0.90
33_A	36_G	0.651	0.90
344_A	362_P	0.651	0.90
361_D	364_V	0.650	0.90
299_L	306_I	0.649	0.90
332_F	403_D	0.648	0.90
439_E	443_Y	0.648	0.90
322_Q	345_E	0.648	0.90
417_W	427_A	0.647	0.90
406_I	441_L	0.646	0.90
351_T	427_A	0.645	0.90
291_F	382_L	0.644	0.89
210_I	271_V	0.643	0.89
402_L	413_W	0.643	0.89
92_V	96_F	0.640	0.89
355_E	427_A	0.640	0.89
452_S	455_F	0.639	0.89
399_R	427_A	0.639	0.89
150_D	203_R	0.639	0.89
25_V	60_T	0.637	0.89
327_A	420_R	0.637	0.89
427_A	435_A	0.636	0.89
335_Y	389_D	0.635	0.89
433_T	441_L	0.634	0.89
402_L	432_V	0.633	0.89
340_M	364_V	0.633	0.89
309_A	370_V	0.633	0.89
305_A	313_D	0.633	0.89
403_D	416_R	0.632	0.89
416_R	427_A	0.632	0.89
211_E	214_L	0.630	0.88
241_C	245_G	0.629	0.88
146_I	217_H	0.629	0.88
90_R	94_A	0.629	0.88
89_K	93_V	0.629	0.88
345_E	350_A	0.628	0.88
325_T	332_F	0.626	0.88
349_G	402_L	0.626	0.88
285_R	288_D	0.626	0.88
102_G	107_T	0.625	0.88
171_C	201_H	0.625	0.88
286_G	290_A	0.624	0.88
81_L	458_K	0.623	0.88
322_Q	398_E	0.622	0.88
466_K	470_D	0.622	0.88
67_V	90_R	0.622	0.88
325_T	398_E	0.620	0.88
393_V	429_V	0.619	0.88
161_D	267_T	0.619	0.88
310_I	376_L	0.618	0.88
323_E	400_P	0.616	0.87
426_L	459_V	0.616	0.87
20_A	24_G	0.615	0.87
466_K	469_V	0.615	0.87
445_L	449_K	0.614	0.87
301_P	382_L	0.614	0.87
399_R	441_L	0.613	0.87
32_Q	37_A	0.611	0.87
395_P	440_K	0.610	0.87
413_W	433_T	0.609	0.87
385_V	460_V	0.609	0.87
417_W	433_T	0.607	0.87
145_T	221_T	0.606	0.86
343_N	349_G	0.604	0.86
29_P	33_A	0.604	0.86
302_V	305_A	0.604	0.86
32_Q	36_G	0.603	0.86
403_D	436_D	0.602	0.86
334_V	403_D	0.601	0.86
403_D	437_P	0.599	0.86
285_R	293_A	0.599	0.86
21_L	68_A	0.599	0.86
402_L	434_G	0.596	0.86
151_T	178_T	0.592	0.85
106_Y	111_P	0.592	0.85
24_G	39_P	0.592	0.85
353_S	437_P	0.592	0.85
258_V	261_A	0.591	0.85
312_L	315_G	0.591	0.85
226_F	229_T	0.590	0.85
415_K	445_L	0.589	0.85
332_F	335_Y	0.588	0.85
245_G	418_F	0.588	0.85
62_V	101_I	0.587	0.85
252_R	257_R	0.586	0.85
120_P	124_V	0.586	0.85
54_G	57_E	0.586	0.85
116_L	120_P	0.584	0.84
223_V	311_K	0.583	0.84
303_I	306_I	0.582	0.84
295_G	460_V	0.582	0.84
403_D	411_V	0.581	0.84
402_L	416_R	0.581	0.84
294_A	298_L	0.581	0.84
335_Y	383_W	0.579	0.84
178_T	233_E	0.578	0.84
299_L	337_F	0.578	0.84
322_Q	437_P	0.578	0.84
427_A	430_N	0.577	0.84
290_A	293_A	0.577	0.84
403_D	435_A	0.577	0.84
431_D	440_K	0.576	0.84
320_Y	402_L	0.575	0.84
80_V	83_V	0.575	0.84
205_G	213_V	0.574	0.83
200_D	203_R	0.574	0.83
66_A	72_L	0.573	0.83
398_E	421_P	0.573	0.83
69_C	72_L	0.571	0.83
233_E	236_G	0.571	0.83
201_H	217_H	0.570	0.83
62_V	94_A	0.570	0.83
425_G	431_D	0.568	0.83
158_L	162_I	0.567	0.83
142_A	168_G	0.564	0.82
344_A	399_R	0.564	0.82
440_K	451_Q	0.564	0.82
278_V	281_Y	0.564	0.82
253_D	256_D	0.563	0.82
155_I	177_R	0.562	0.82
102_G	113_T	0.562	0.82
401_E	441_L	0.561	0.82
343_N	348_T	0.559	0.82
432_V	451_Q	0.558	0.82
28_S	126_V	0.557	0.82
105_D	110_L	0.556	0.81
322_Q	388_G	0.555	0.81
406_I	417_W	0.555	0.81
334_V	398_E	0.552	0.81
395_P	398_E	0.552	0.81
371_L	375_H	0.552	0.81
76_R	139_P	0.552	0.81
66_A	94_A	0.551	0.81
97_A	101_I	0.551	0.81
418_F	449_K	0.551	0.81
296_L	386_L	0.550	0.81
406_I	451_Q	0.550	0.81
349_G	399_R	0.549	0.81
366_R	370_V	0.549	0.81
292_S	392_V	0.548	0.81
291_F	294_A	0.548	0.81
52_A	112_R	0.546	0.80
395_P	399_R	0.546	0.80
159_V	198_L	0.544	0.80
464_V	468_V	0.543	0.80
399_R	434_G	0.543	0.80
269_A	449_K	0.542	0.80
70_L	73_Y	0.541	0.80
35_T	38_L	0.540	0.80
350_A	375_H	0.540	0.80
91_V	126_V	0.539	0.79
400_P	437_P	0.539	0.79
118_V	122_L	0.539	0.79
416_R	425_G	0.539	0.79
214_L	219_I	0.539	0.79
313_D	371_L	0.539	0.79
178_T	181_A	0.538	0.79
76_R	79_R	0.537	0.79
347_A	351_T	0.537	0.79
102_G	115_L	0.537	0.79
417_W	435_A	0.537	0.79
460_V	464_V	0.536	0.79
403_D	440_K	0.536	0.79
318_V	337_F	0.536	0.79
344_A	427_A	0.536	0.79
111_P	114_T	0.534	0.79
316_G	365_T	0.533	0.79
34_L	37_A	0.533	0.79
399_R	405_D	0.533	0.79
353_S	427_A	0.532	0.79
36_G	41_F	0.532	0.79
401_E	437_P	0.532	0.79
328_F	418_F	0.532	0.79
360_V	364_V	0.530	0.78
292_S	297_L	0.529	0.78
224_L	234_F	0.529	0.78
365_T	369_R	0.529	0.78
399_R	416_R	0.527	0.78
406_I	421_P	0.527	0.78
298_L	301_P	0.526	0.78
437_P	443_Y	0.525	0.78
382_L	466_K	0.525	0.78
87_A	123_L	0.524	0.78
402_L	421_P	0.524	0.78
95_L	298_L	0.521	0.77
300_S	305_A	0.521	0.77
375_H	441_L	0.518	0.77
232_A	236_G	0.518	0.77
427_A	443_Y	0.517	0.77
307_T	310_I	0.517	0.77
348_T	413_W	0.517	0.77
52_A	111_P	0.517	0.77
398_E	436_D	0.517	0.77
355_E	360_V	0.516	0.76
285_R	420_R	0.516	0.76
407_Q	412_D	0.516	0.76
59_S	118_V	0.515	0.76
303_I	307_T	0.514	0.76
346_D	349_G	0.514	0.76
433_T	473_E	0.513	0.76
26_A	30_T	0.512	0.76
311_K	342_E	0.512	0.76
355_E	437_P	0.512	0.76
400_P	416_R	0.511	0.76
128_A	212_D	0.511	0.76
375_H	466_K	0.511	0.76
247_A	272_D	0.510	0.76
174_V	201_H	0.510	0.76
38_L	121_V	0.508	0.75
300_S	306_I	0.508	0.75
139_P	142_A	0.507	0.75
23_V	27_N	0.506	0.75
21_L	64_V	0.506	0.75
157_R	160_A	0.506	0.75
131_V	135_R	0.505	0.75
375_H	472_V	0.505	0.75
301_P	395_P	0.504	0.75
398_E	405_D	0.504	0.75
221_T	247_A	0.503	0.75
319_L	389_D	0.501	0.74
406_I	433_T	0.501	0.74
355_E	362_P	0.501	0.74
245_G	325_T	0.501	0.74
34_L	38_L	0.500	0.74

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3nklA	2	0.2537	99.2	0.906	Contact Map
3keoA	2	0.4088	98.4	0.929	Contact Map
2dt5A	3	0.4277	98.1	0.934	Contact Map
3wg9A	2	0.4256	98.1	0.934	Contact Map
2vt3A	2	0.4151	97.9	0.938	Contact Map
2py6A	4	0.6059	97.9	0.939	Contact Map
4m98A	3	0.4298	97.1	0.946	Contact Map
4rv9A	1	0.5136	95.6	0.954	Contact Map
4ea9A	3	0.4004	94.8	0.956	Contact Map
3ff4A	1	0.2453	78.8	0.968	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0123 seconds.