Q9HSW2 - HALSA - GREMLIN Contacts

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Q9HSW2 - Uncharacterized protein

UniProt:	Q9HSW2	Sequences: MNIRRLFSDAGISALRVIVLSIRSLLIISIITKLIGSGAQGIWATILALVGLFASAGGLHMHGALIRYSPSSDASQVFSDTLTVTLMMSILTGAIFYILSGAILSVINPSGDISTTLMIPAAVYTGASLLSSFLSNYPRALRRVKRYEALLIALNGIEVIVLAVTLYLSESLLDGFWALALTHIIFDFVFLFVFSRDDLTIPDISTFPLYLRYAVPMVPKELSGTLLSHADKILIIRFLGPSAAGIYTVSYTISSFLQKLAGIFNSTLYPNVTAAWENEEFDELSRFYSNFLRGYVLFALPAIGGLSFLSVAILRFISTPEIAVNGEWIVPILAVGFAFQGAEGFLSYPLQAAEETTRLSIITFFAVILNLCLNLVLLPIIGLEGAAVATTVSFGFRTVLLFHLSKSIIDFNFPILMTGKAIAATTIMVIVLIMMPINSQPLLLVVAPVTGVLIYFVSLWLVRGLTRDDIAVAQSYITNQ	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	480 (449)
Sequences:	17270 (14934)
Seq/√Len:	704.8

ECOLI - WZXC MURJ RFBX WZXE YGHQ MDTK
BACSU - SP5B TUAB YABM EPSK YTGP YKVU
HALSA - Q9HSW2 Q9HRT3 Q9HQQ5 Q9HRF2 Q9HN79
SULSO - Q97XT3 Q97XG2 Q7LXE2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
280_E	283_E	4.817	1.00
208_P	212_R	3.373	1.00
143_R	146_R	3.186	1.00
99_L	102_A	3.081	1.00
355_E	358_R	3.019	1.00
327_E	331_P	2.978	1.00
416_L	420_K	2.925	1.00
44_A	248_T	2.885	1.00
357_T	361_I	2.744	1.00
307_S	331_P	2.703	1.00
142_R	274_A	2.687	1.00
355_E	408_I	2.582	1.00
246_I	325_N	2.487	1.00
69_S	140_A	2.438	1.00
311_V	315_R	2.371	1.00
310_S	327_E	2.314	1.00
366_A	397_R	2.218	1.00
417_M	420_K	2.217	1.00
240_G	243_A	2.195	1.00
339_F	395_G	2.174	1.00
332_I	384_E	2.173	1.00
231_D	247_Y	2.145	1.00
310_S	331_P	2.124	1.00
275_A	283_E	2.071	1.00
199_L	202_P	2.057	1.00
97_Y	119_I	2.056	1.00
235_I	239_L	2.050	1.00
362_I	400_L	2.029	1.00
219_P	360_S	2.028	1.00
67_R	71_S	2.022	1.00
274_A	278_N	2.010	1.00
231_D	374_N	2.006	1.00
329_I	383_L	2.004	1.00
373_L	389_A	2.001	1.00
332_I	391_T	1.958	1.00
12_I	145_K	1.950	1.00
286_R	290_N	1.944	1.00
319_T	322_I	1.941	1.00
309_L	312_A	1.935	1.00
305_G	309_L	1.904	1.00
36_G	39_A	1.888	1.00
68_Y	213_Y	1.884	1.00
431_V	454_I	1.880	1.00
239_L	243_A	1.813	1.00
428_M	432_L	1.807	1.00
312_A	315_R	1.804	1.00
281_F	285_S	1.804	1.00
378_L	386_A	1.789	1.00
299_A	341_G	1.772	1.00
234_L	378_L	1.749	1.00
381_I	388_V	1.725	1.00
369_L	396_F	1.705	1.00
171_S	174_D	1.682	1.00
33_K	319_T	1.671	1.00
382_G	385_G	1.664	1.00
428_M	451_G	1.661	1.00
142_R	271_N	1.655	1.00
203_D	206_T	1.652	1.00
234_L	374_N	1.651	1.00
45_T	236_I	1.643	1.00
311_V	327_E	1.642	1.00
304_G	429_V	1.642	1.00
288_Y	349_P	1.626	1.00
328_W	384_E	1.624	1.00
137_Y	141_L	1.622	1.00
385_G	389_A	1.621	1.00
231_D	390_T	1.607	1.00
145_K	149_A	1.606	1.00
100_S	119_I	1.606	1.00
377_L	389_A	1.606	1.00
239_L	383_L	1.598	1.00
374_N	378_L	1.594	1.00
223_S	364_F	1.591	1.00
43_W	47_L	1.586	1.00
283_E	286_R	1.580	1.00
452_V	456_F	1.564	1.00
276_W	353_A	1.549	1.00
332_I	388_V	1.530	1.00
303_I	338_A	1.529	1.00
305_G	448_P	1.526	1.00
329_I	387_A	1.517	1.00
272_V	284_L	1.512	1.00
77_V	81_T	1.511	1.00
311_V	331_P	1.506	1.00
399_V	403_H	1.503	1.00
75_S	79_S	1.501	1.00
309_L	313_I	1.501	1.00
285_S	289_S	1.500	1.00
32_T	249_V	1.497	1.00
314_L	330_V	1.493	1.00
432_L	451_G	1.485	1.00
372_C	376_V	1.482	1.00
76_Q	203_D	1.480	1.00
306_L	334_A	1.475	1.00
336_G	391_T	1.474	1.00
254_S	333_L	1.468	1.00
76_Q	80_D	1.466	1.00
328_W	331_P	1.464	1.00
314_L	326_G	1.461	1.00
235_I	386_A	1.461	1.00
300_L	425_T	1.457	1.00
332_I	387_A	1.455	1.00
339_F	398_T	1.442	1.00
240_G	244_A	1.437	1.00
305_G	428_M	1.436	1.00
174_D	178_A	1.433	1.00
377_L	381_I	1.430	1.00
429_V	433_I	1.428	1.00
283_E	287_F	1.425	1.00
370_N	374_N	1.423	1.00
424_A	428_M	1.418	1.00
71_S	354_E	1.416	1.00
275_A	287_F	1.393	1.00
376_V	379_P	1.391	1.00
284_L	349_P	1.385	1.00
158_E	182_T	1.380	1.00
96_F	122_A	1.377	1.00
389_A	393_S	1.360	1.00
19_V	152_I	1.360	1.00
243_A	383_L	1.355	1.00
403_H	407_S	1.355	1.00
242_S	246_I	1.345	1.00
320_P	323_A	1.340	1.00
289_S	293_R	1.331	1.00
250_S	326_G	1.329	1.00
74_A	77_V	1.326	1.00
73_D	76_Q	1.326	1.00
25_L	29_S	1.324	1.00
268_L	291_F	1.323	1.00
361_I	365_F	1.317	1.00
46_I	121_A	1.315	1.00
377_L	380_I	1.314	1.00
235_I	244_A	1.313	1.00
84_V	207_F	1.305	1.00
362_I	404_L	1.305	1.00
28_I	252_T	1.305	1.00
157_I	185_I	1.305	1.00
216_P	360_S	1.299	1.00
234_L	375_L	1.298	1.00
18_I	22_I	1.296	1.00
282_D	286_R	1.296	1.00
230_A	371_L	1.295	1.00
250_S	329_I	1.294	1.00
164_V	168_L	1.294	1.00
229_H	232_K	1.286	1.00
325_N	328_W	1.285	1.00
117_L	176_F	1.283	1.00
198_D	201_I	1.274	1.00
163_A	167_Y	1.247	1.00
161_V	178_A	1.246	1.00
64_A	213_Y	1.243	1.00
376_V	380_I	1.242	1.00
29_S	33_K	1.241	1.00
425_T	429_V	1.240	1.00
37_S	246_I	1.238	1.00
234_L	238_F	1.234	1.00
102_A	106_V	1.214	1.00
335_V	391_T	1.213	1.00
126_G	129_L	1.206	1.00
281_F	353_A	1.201	1.00
215_V	219_P	1.199	1.00
143_R	197_D	1.191	1.00
246_I	326_G	1.190	1.00
40_Q	44_A	1.182	1.00
160_I	164_V	1.182	1.00
22_I	26_L	1.181	1.00
272_V	352_A	1.179	1.00
68_Y	71_S	1.178	1.00
276_W	284_L	1.178	1.00
70_P	140_A	1.176	1.00
170_E	174_D	1.172	1.00
384_E	387_A	1.171	1.00
79_S	83_T	1.169	1.00
173_L	176_F	1.165	1.00
80_D	207_F	1.164	1.00
27_I	159_V	1.163	1.00
370_N	390_T	1.162	1.00
101_G	105_S	1.161	1.00
362_I	401_L	1.161	1.00
249_V	318_S	1.157	1.00
269_Y	273_T	1.153	1.00
346_L	402_F	1.142	1.00
288_Y	346_L	1.138	1.00
198_D	202_P	1.137	1.00
42_I	241_P	1.134	1.00
306_L	330_V	1.134	1.00
127_A	187_D	1.131	1.00
314_L	327_E	1.130	1.00
20_L	155_N	1.127	1.00
192_F	196_R	1.126	1.00
329_I	384_E	1.119	1.00
381_I	385_G	1.118	1.00
150_L	190_F	1.116	1.00
296_V	300_L	1.115	1.00
78_F	137_Y	1.115	1.00
369_L	373_L	1.113	1.00
323_A	327_E	1.109	1.00
44_A	245_G	1.109	1.00
32_T	318_S	1.106	1.00
39_A	42_I	1.103	1.00
346_L	401_L	1.102	1.00
374_N	390_T	1.101	1.00
144_V	267_T	1.100	1.00
275_A	280_E	1.100	1.00
303_I	307_S	1.098	1.00
93_G	96_F	1.095	1.00
349_P	405_S	1.095	1.00
216_P	357_T	1.094	1.00
16_R	148_E	1.090	1.00
97_Y	101_G	1.090	1.00
101_G	119_I	1.084	1.00
177_W	181_L	1.084	1.00
282_D	285_S	1.083	1.00
226_L	367_V	1.083	1.00
223_S	360_S	1.083	1.00
58_G	62_H	1.082	1.00
66_I	136_N	1.076	1.00
209_L	354_E	1.076	1.00
87_M	91_L	1.071	1.00
83_T	87_M	1.067	1.00
370_N	393_S	1.067	1.00
364_F	368_I	1.065	1.00
223_S	367_V	1.061	1.00
127_A	184_I	1.061	1.00
336_G	387_A	1.052	1.00
10_A	267_T	1.049	1.00
43_W	175_G	1.047	1.00
150_L	189_V	1.044	1.00
373_L	377_L	1.043	1.00
45_T	244_A	1.041	1.00
161_V	165_T	1.036	1.00
93_G	97_Y	1.035	1.00
188_F	192_F	1.034	1.00
271_N	274_A	1.030	1.00
227_L	370_N	1.028	1.00
368_I	372_C	1.024	1.00
211_L	214_A	1.022	1.00
388_V	392_V	1.021	1.00
13_S	267_T	1.021	1.00
342_A	398_T	1.021	1.00
23_R	159_V	1.021	1.00
361_I	364_F	1.017	1.00
213_Y	356_T	1.015	1.00
231_D	370_N	1.012	1.00
108_N	111_G	1.010	1.00
115_T	119_I	1.008	1.00
336_G	339_F	1.002	1.00
358_R	404_L	1.001	1.00
445_V	449_V	0.997	1.00
10_A	264_F	0.995	1.00
235_I	247_Y	0.995	1.00
238_F	378_L	0.995	1.00
28_I	318_S	0.994	1.00
313_I	317_I	0.992	1.00
29_S	318_S	0.990	1.00
37_S	245_G	0.989	1.00
64_A	214_A	0.986	1.00
67_R	354_E	0.984	1.00
374_N	377_L	0.983	1.00
250_S	333_L	0.979	1.00
220_K	359_L	0.978	1.00
316_F	444_L	0.978	1.00
403_H	406_K	0.975	1.00
34_L	167_Y	0.971	1.00
310_S	330_V	0.970	1.00
5_R	8_S	0.966	1.00
204_I	208_P	0.964	1.00
307_S	310_S	0.963	1.00
380_I	384_E	0.962	1.00
245_G	248_T	0.958	1.00
179_L	183_H	0.958	1.00
235_I	383_L	0.957	1.00
123_V	126_G	0.957	1.00
30_I	34_L	0.956	1.00
46_I	117_L	0.953	1.00
69_S	141_L	0.952	1.00
191_L	195_S	0.950	1.00
51_G	55_S	0.948	1.00
17_V	21_S	0.943	1.00
350_L	404_L	0.941	1.00
64_A	210_Y	0.935	1.00
443_L	447_A	0.935	1.00
102_A	105_S	0.934	1.00
123_V	180_A	0.933	1.00
333_L	387_A	0.932	1.00
309_L	447_A	0.927	1.00
40_Q	245_G	0.924	1.00
100_S	104_L	0.924	1.00
112_D	115_T	0.923	1.00
119_I	123_V	0.923	1.00
247_Y	333_L	0.923	1.00
87_M	90_I	0.920	1.00
180_A	183_H	0.920	1.00
430_I	434_M	0.919	1.00
14_A	263_I	0.918	1.00
312_A	447_A	0.917	1.00
35_I	39_A	0.915	1.00
290_N	293_R	0.911	1.00
34_L	166_L	0.910	1.00
391_T	394_F	0.910	1.00
98_I	101_G	0.907	1.00
182_T	186_F	0.907	1.00
178_A	182_T	0.906	1.00
177_W	180_A	0.905	1.00
31_I	175_G	0.904	1.00
13_S	148_E	0.903	1.00
245_G	249_V	0.899	1.00
440_Q	443_L	0.897	1.00
122_A	126_G	0.894	1.00
307_S	311_V	0.891	1.00
331_P	335_V	0.891	1.00
301_P	455_Y	0.889	1.00
284_L	353_A	0.888	1.00
37_S	242_S	0.885	1.00
232_K	244_A	0.883	1.00
388_V	391_T	0.881	1.00
164_V	167_Y	0.880	1.00
65_L	69_S	0.879	1.00
448_P	451_G	0.878	1.00
400_L	403_H	0.878	1.00
43_W	172_L	0.877	1.00
271_N	275_A	0.876	1.00
86_L	90_I	0.876	1.00
71_S	209_L	0.874	1.00
38_G	241_P	0.874	1.00
379_P	386_A	0.873	1.00
287_F	291_F	0.866	1.00
225_T	229_H	0.865	1.00
158_E	162_L	0.860	1.00
326_G	329_I	0.860	1.00
36_G	322_I	0.859	1.00
374_N	386_A	0.856	1.00
84_V	88_M	0.855	1.00
29_S	32_T	0.854	1.00
447_A	451_G	0.854	1.00
301_P	428_M	0.852	1.00
82_L	134_L	0.851	1.00
351_Q	359_L	0.851	1.00
250_S	330_V	0.849	1.00
441_P	448_P	0.845	1.00
211_L	215_V	0.840	1.00
90_I	94_A	0.839	1.00
82_L	85_T	0.838	1.00
9_D	142_R	0.837	1.00
269_Y	348_Y	0.837	1.00
37_S	322_I	0.837	1.00
189_V	193_V	0.836	1.00
68_Y	209_L	0.836	1.00
435_M	450_T	0.834	1.00
95_I	99_L	0.834	1.00
12_I	16_R	0.834	1.00
64_A	68_Y	0.832	1.00
375_L	379_P	0.832	1.00
79_S	82_L	0.830	1.00
297_L	301_P	0.829	1.00
10_A	14_A	0.828	1.00
421_A	425_T	0.826	1.00
373_L	392_V	0.825	1.00
81_T	210_Y	0.823	1.00
162_L	178_A	0.823	1.00
6_L	10_A	0.822	1.00
254_S	337_F	0.822	1.00
175_G	179_L	0.822	1.00
91_L	95_I	0.820	1.00
400_L	404_L	0.819	1.00
396_F	400_L	0.817	1.00
11_G	15_L	0.814	1.00
448_P	452_V	0.813	1.00
295_Y	341_G	0.812	1.00
186_F	190_F	0.811	1.00
41_G	242_S	0.810	1.00
216_P	356_T	0.807	1.00
308_F	429_V	0.804	1.00
100_S	103_I	0.802	1.00
358_R	361_I	0.800	1.00
89_S	93_G	0.799	1.00
8_S	145_K	0.797	1.00
212_R	215_V	0.797	1.00
350_L	359_L	0.791	1.00
261_A	265_N	0.791	1.00
371_L	375_L	0.790	1.00
233_I	237_R	0.789	1.00
80_D	84_V	0.789	1.00
373_L	376_V	0.786	1.00
251_Y	255_S	0.786	1.00
7_F	11_G	0.786	1.00
304_G	308_F	0.782	1.00
307_S	335_V	0.779	1.00
419_G	423_A	0.778	1.00
9_D	267_T	0.777	1.00
146_R	193_V	0.776	1.00
360_S	364_F	0.775	1.00
384_E	388_V	0.775	1.00
425_T	428_M	0.775	1.00
37_S	321_E	0.774	1.00
66_I	140_A	0.774	1.00
293_R	297_L	0.774	1.00
275_A	278_N	0.773	1.00
48_A	232_K	0.773	1.00
179_L	182_T	0.773	1.00
404_L	407_S	0.772	1.00
362_I	366_A	0.772	1.00
415_I	419_G	0.772	1.00
273_T	277_E	0.772	1.00
67_R	356_T	0.770	1.00
165_T	170_E	0.770	1.00
249_V	252_T	0.767	1.00
315_R	323_A	0.767	1.00
222_L	226_L	0.767	1.00
422_I	425_T	0.766	1.00
229_H	233_I	0.766	1.00
307_S	334_A	0.765	1.00
335_V	338_A	0.763	1.00
321_E	325_N	0.763	1.00
236_I	244_A	0.763	1.00
31_I	162_L	0.761	1.00
65_L	81_T	0.760	1.00
248_T	252_T	0.759	1.00
23_R	27_I	0.759	1.00
301_P	304_G	0.759	1.00
314_L	318_S	0.757	1.00
417_M	421_A	0.756	1.00
28_I	32_T	0.756	1.00
98_I	102_A	0.755	1.00
146_R	149_A	0.753	1.00
336_G	390_T	0.752	1.00
213_Y	217_M	0.752	1.00
253_I	318_S	0.750	1.00
61_M	81_T	0.749	1.00
359_L	363_T	0.747	1.00
83_T	86_L	0.745	1.00
161_V	181_L	0.743	1.00
47_L	51_G	0.743	1.00
304_G	425_T	0.742	1.00
51_G	54_A	0.742	1.00
231_D	251_Y	0.741	1.00
428_M	431_V	0.739	1.00
154_L	158_E	0.738	1.00
134_L	191_L	0.730	1.00
161_V	164_V	0.728	1.00
36_G	321_E	0.727	1.00
406_K	409_I	0.726	1.00
124_Y	183_H	0.726	1.00
212_R	216_P	0.725	1.00
316_F	441_P	0.723	1.00
85_T	89_S	0.723	1.00
217_M	356_T	0.722	1.00
72_S	76_Q	0.718	1.00
127_A	180_A	0.717	1.00
395_G	399_V	0.716	1.00
159_V	163_A	0.714	1.00
207_F	211_L	0.714	1.00
156_G	160_I	0.713	1.00
97_Y	100_S	0.711	1.00
365_F	400_L	0.710	1.00
310_S	334_A	0.708	1.00
94_A	98_I	0.707	1.00
244_A	248_T	0.707	1.00
247_Y	251_Y	0.706	1.00
348_Y	352_A	0.705	1.00
267_T	270_P	0.705	1.00
229_H	255_S	0.705	1.00
291_F	345_F	0.704	1.00
154_L	186_F	0.701	1.00
348_Y	351_Q	0.701	1.00
252_T	255_S	0.700	1.00
391_T	395_G	0.700	1.00
7_F	10_A	0.699	1.00
30_I	167_Y	0.697	1.00
180_A	184_I	0.696	1.00
120_P	180_A	0.696	1.00
302_A	305_G	0.696	1.00
60_H	214_A	0.695	1.00
118_M	122_A	0.695	1.00
135_S	139_R	0.694	1.00
223_S	363_T	0.693	1.00
402_F	406_K	0.693	1.00
76_Q	79_S	0.692	1.00
269_Y	352_A	0.689	1.00
350_L	405_S	0.688	1.00
252_T	256_F	0.687	1.00
158_E	178_A	0.686	1.00
14_A	18_I	0.685	1.00
305_G	451_G	0.684	1.00
30_I	163_A	0.683	1.00
378_L	385_G	0.680	1.00
210_Y	214_A	0.679	1.00
111_G	114_S	0.679	1.00
69_S	74_A	0.679	1.00
165_T	168_L	0.679	1.00
336_G	394_F	0.679	1.00
19_V	23_R	0.678	1.00
89_S	129_L	0.678	1.00
74_A	141_L	0.677	1.00
429_V	432_L	0.675	1.00
201_I	204_I	0.674	1.00
71_S	277_E	0.669	1.00
439_S	443_L	0.669	1.00
439_S	442_L	0.668	1.00
29_S	317_I	0.668	1.00
404_L	408_I	0.667	1.00
15_L	19_V	0.667	1.00
254_S	257_L	0.666	1.00
19_V	156_G	0.666	1.00
81_T	85_T	0.666	1.00
444_L	448_P	0.665	1.00
221_E	225_T	0.662	1.00
54_A	58_G	0.658	1.00
432_L	435_M	0.658	1.00
16_R	152_I	0.658	1.00
41_G	245_G	0.656	1.00
119_I	122_A	0.655	1.00
312_A	443_L	0.654	1.00
295_Y	345_F	0.654	1.00
50_V	125_T	0.653	1.00
369_L	372_C	0.650	1.00
43_W	176_F	0.646	1.00
130_L	187_D	0.646	1.00
301_P	425_T	0.646	1.00
227_L	367_V	0.644	1.00
212_R	357_T	0.642	1.00
114_S	119_I	0.642	1.00
139_R	147_Y	0.641	1.00
232_K	248_T	0.641	1.00
420_K	424_A	0.640	1.00
346_L	398_T	0.638	1.00
243_A	246_I	0.638	1.00
138_P	146_R	0.637	1.00
101_G	104_L	0.636	1.00
263_I	266_S	0.634	1.00
356_T	359_L	0.631	1.00
335_V	339_F	0.630	1.00
346_L	405_S	0.630	1.00
45_T	48_A	0.629	1.00
150_L	186_F	0.629	1.00
74_A	78_F	0.626	1.00
40_Q	249_V	0.625	1.00
131_S	187_D	0.625	1.00
287_F	290_N	0.625	1.00
330_V	334_A	0.623	1.00
78_F	81_T	0.622	1.00
238_F	375_L	0.621	1.00
193_V	197_D	0.620	1.00
174_D	177_W	0.617	1.00
66_I	70_P	0.617	1.00
427_I	430_I	0.616	1.00
62_H	136_N	0.616	1.00
149_A	153_A	0.616	1.00
220_K	224_G	0.614	1.00
120_P	173_L	0.613	1.00
365_F	368_I	0.612	1.00
192_F	195_S	0.609	1.00
96_F	100_S	0.607	1.00
93_G	126_G	0.606	1.00
101_G	114_S	0.606	1.00
80_D	83_T	0.606	1.00
249_V	322_I	0.605	1.00
99_L	103_I	0.601	1.00
441_P	445_V	0.600	1.00
120_P	176_F	0.599	1.00
343_E	398_T	0.598	1.00
220_K	363_T	0.597	1.00
92_T	96_F	0.597	1.00
252_T	318_S	0.596	1.00
90_I	126_G	0.596	1.00
135_S	151_L	0.594	1.00
155_N	159_V	0.591	1.00
100_S	118_M	0.590	1.00
390_T	393_S	0.590	1.00
421_A	424_A	0.589	1.00
315_R	320_P	0.589	1.00
340_Q	344_G	0.588	1.00
262_G	266_S	0.586	1.00
120_P	177_W	0.586	1.00
24_S	28_I	0.585	1.00
275_A	284_L	0.583	1.00
374_N	389_A	0.583	1.00
91_L	94_A	0.581	1.00
31_I	40_Q	0.581	1.00
423_A	426_T	0.580	1.00
86_L	89_S	0.580	1.00
271_N	287_F	0.578	1.00
358_R	362_I	0.576	1.00
122_A	125_T	0.575	1.00
217_M	351_Q	0.574	1.00
295_Y	299_A	0.573	1.00
136_N	140_A	0.571	1.00
17_V	263_I	0.571	1.00
286_R	289_S	0.570	1.00
387_A	391_T	0.570	1.00
231_D	234_L	0.570	1.00
186_F	189_V	0.570	1.00
270_P	274_A	0.570	1.00
432_L	447_A	0.570	1.00
305_G	452_V	0.569	1.00
150_L	154_L	0.566	1.00
260_L	263_I	0.566	1.00
303_I	334_A	0.565	1.00
364_F	367_V	0.565	1.00
426_T	430_I	0.564	1.00
50_V	54_A	0.564	1.00
100_S	122_A	0.563	1.00
13_S	144_V	0.563	1.00
339_F	391_T	0.560	1.00
224_G	228_S	0.559	1.00
31_I	35_I	0.557	1.00
249_V	326_G	0.556	1.00
454_I	457_V	0.555	1.00
230_A	234_L	0.555	1.00
128_S	183_H	0.553	1.00
28_I	40_Q	0.551	1.00
39_A	172_L	0.549	1.00
120_P	124_Y	0.548	1.00
157_I	160_I	0.548	1.00
35_I	40_Q	0.547	1.00
65_L	77_V	0.547	1.00
406_K	410_D	0.546	1.00
359_L	401_L	0.545	1.00
304_G	307_S	0.544	1.00
209_L	213_Y	0.543	1.00
144_V	148_E	0.543	1.00
20_L	24_S	0.543	1.00
220_K	360_S	0.540	1.00
52_L	225_T	0.540	1.00
67_R	352_A	0.539	1.00
74_A	81_T	0.536	1.00
84_V	89_S	0.536	1.00
165_T	178_A	0.535	1.00
431_V	434_M	0.535	1.00
431_V	450_T	0.535	1.00
110_S	113_I	0.534	1.00
38_G	42_I	0.534	1.00
315_R	327_E	0.532	1.00
223_S	227_L	0.532	1.00
45_T	232_K	0.532	1.00
144_V	147_Y	0.530	1.00
232_K	251_Y	0.529	1.00
394_F	397_R	0.528	1.00
19_V	22_I	0.527	1.00
349_P	353_A	0.527	1.00
162_L	166_L	0.527	1.00
104_L	118_M	0.525	1.00
77_V	80_D	0.524	1.00
8_S	11_G	0.522	1.00
13_S	17_V	0.522	1.00
16_R	19_V	0.521	1.00
369_L	393_S	0.521	1.00
5_R	142_R	0.519	1.00
293_R	417_M	0.519	1.00
407_S	410_D	0.518	1.00
347_S	351_Q	0.517	1.00
301_P	305_G	0.516	1.00
264_F	268_L	0.516	1.00
261_A	344_G	0.516	1.00
268_L	272_V	0.515	1.00
366_A	393_S	0.515	1.00
443_L	446_V	0.514	1.00
239_L	382_G	0.513	1.00
125_T	129_L	0.513	1.00
445_V	448_P	0.512	0.99
363_T	367_V	0.511	0.99
133_F	136_N	0.510	0.99
347_S	359_L	0.508	0.99
438_N	442_L	0.507	0.99
308_F	311_V	0.507	0.99
73_D	77_V	0.506	0.99
300_L	338_A	0.506	0.99
449_V	452_V	0.506	0.99
405_S	408_I	0.505	0.99
11_G	18_I	0.505	0.99
153_A	189_V	0.504	0.99
450_T	453_L	0.504	0.99
334_A	337_F	0.502	0.99
243_A	325_N	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4lz6A	1	0.8625	100	0.39	Contact Map
3w4tA	1	0.8458	100	0.396	Contact Map
4humA	1	0.8729	100	0.397	Contact Map
3mktA	1	0.8646	100	0.416	Contact Map
2cfqA	1	0.8187	77	0.931	Contact Map
3o7qA	1	0.7708	61.8	0.938	Contact Map
1pw4A	1	0.8083	55.4	0.941	Contact Map
3wdoA	1	0.8	53.6	0.941	Contact Map
4m64A	1	0.8125	21.2	0.953	Contact Map
4tphA	2	0.3854	12.5	0.957	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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