Q9HST2 - HALSA - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

Q9HST2 - Molybdenum cofactor biosynthesis protein

UniProt:	Q9HST2	Sequences: MTDDRRTAGFKQRTRVAEARERLLSAVDPLARTARVALGDADGRVLAADVEAPRAVPHYERAAMDGFAVRAADTFGAGDRSPVVLDVGTGSVGPGEAVRVHTGSELPAGADAVVMIEDAERRGDRVDVFAAAAGGANVAPIGEDVSDGQHLYDAGHRLRPSDLGLLKSAGVDAVAVYERPTVGVLPTGEELVAADPGPGEVVETNGGTVAQYVSRWGGVPTRRGVVTDDEAALRTAIREAVDSHDVVVTTGGSSVGARDHVPEVIADLGTVLVHGVALQPGHPVALCVVDDTPVVALPGYPVAAIVNAVQFLRPLLKAVGHAPATAHPTTDAVLARKIASEPGTRSFVRVTRHGDEDGRPTVTPTRAGGSGVLSSVALADGWVVVPEDCEGYDAGTTVAVEQWEWSA	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	407 (387)
Sequences:	5337 (4039)
Seq/√Len:	205.3

ECOLI - MOEA
BACSU - MOEA
HALSA - Q9HST2 Q9HST3
SULSO - Q97W71 Q7LXN4

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
183_G	244_H	3.606	1.00
213_V	218_G	3.540	1.00
34_A	44_R	3.514	1.00
166_L	174_V	3.115	1.00
48_A	175_A	3.103	1.00
234_R	267_D	3.094	1.00
159_R	162_D	3.083	1.00
35_R	173_A	2.962	1.00
82_P	85_L	2.903	1.00
331_D	399_A	2.849	1.00
106_L	138_V	2.797	1.00
156_H	162_D	2.779	1.00
81_S	85_L	2.769	1.00
60_E	140_P	2.744	1.00
93_G	96_E	2.725	1.00
331_D	397_T	2.644	1.00
393_D	396_T	2.517	1.00
55_A	141_I	2.438	1.00
345_R	384_V	2.379	1.00
337_K	393_D	2.353	1.00
70_R	73_D	2.301	1.00
82_P	96_E	2.294	1.00
197_G	200_E	2.265	1.00
151_L	169_A	2.254	1.00
49_D	153_D	2.248	1.00
295_V	312_L	2.225	1.00
49_D	150_H	2.204	1.00
55_A	147_D	2.201	1.00
51_E	150_H	2.183	1.00
334_L	392_Y	2.177	1.00
337_K	394_A	2.136	1.00
60_E	141_I	2.131	1.00
49_D	154_A	2.117	1.00
345_R	387_E	2.114	1.00
38_L	167_K	2.104	1.00
270_T	288_V	2.047	1.00
33_T	175_A	2.037	1.00
332_A	400_V	2.017	1.00
120_E	127_D	1.997	1.00
35_R	175_A	1.987	1.00
46_L	152_Y	1.972	1.00
221_T	244_H	1.961	1.00
329_T	399_A	1.877	1.00
381_G	400_V	1.876	1.00
350_V	381_G	1.869	1.00
55_A	146_S	1.868	1.00
350_V	383_V	1.859	1.00
21_E	25_S	1.853	1.00
353_H	363_T	1.843	1.00
164_G	208_T	1.816	1.00
230_E	264_V	1.810	1.00
16_V	347_F	1.791	1.00
239_E	243_S	1.774	1.00
152_Y	162_D	1.769	1.00
146_S	149_Q	1.761	1.00
192_V	200_E	1.760	1.00
36_V	44_R	1.739	1.00
61_R	139_A	1.729	1.00
27_V	315_L	1.724	1.00
68_A	110_A	1.712	1.00
313_R	317_K	1.690	1.00
335_A	361_T	1.678	1.00
115_M	118_D	1.677	1.00
308_A	312_L	1.661	1.00
230_E	263_E	1.653	1.00
333_V	397_T	1.646	1.00
216_W	308_A	1.645	1.00
69_V	112_A	1.620	1.00
295_V	315_L	1.602	1.00
246_V	316_L	1.599	1.00
179_R	219_V	1.598	1.00
71_A	112_A	1.597	1.00
248_V	312_L	1.594	1.00
40_D	214_S	1.572	1.00
71_A	111_D	1.570	1.00
181_T	219_V	1.558	1.00
332_A	362_V	1.547	1.00
335_A	363_T	1.542	1.00
59_Y	105_E	1.533	1.00
276_V	311_F	1.530	1.00
351_T	363_T	1.519	1.00
150_H	153_D	1.514	1.00
80_R	127_D	1.513	1.00
119_A	126_V	1.504	1.00
184_V	210_A	1.489	1.00
92_V	110_A	1.489	1.00
158_L	162_D	1.475	1.00
37_A	40_D	1.468	1.00
305_I	376_V	1.451	1.00
208_T	305_I	1.443	1.00
227_T	232_A	1.443	1.00
80_R	125_R	1.408	1.00
50_V	166_L	1.400	1.00
230_E	267_D	1.390	1.00
34_A	178_E	1.386	1.00
246_V	295_V	1.379	1.00
330_T	402_Q	1.378	1.00
85_L	98_V	1.372	1.00
88_G	258_R	1.369	1.00
265_I	294_V	1.354	1.00
114_V	119_A	1.353	1.00
15_R	18_E	1.350	1.00
332_A	352_R	1.350	1.00
54_R	202_V	1.341	1.00
333_V	361_T	1.340	1.00
351_T	380_D	1.338	1.00
113_V	137_N	1.327	1.00
116_I	255_V	1.326	1.00
229_D	232_A	1.319	1.00
53_P	171_V	1.316	1.00
383_V	398_V	1.313	1.00
234_R	238_R	1.307	1.00
213_V	220_P	1.306	1.00
212_Y	308_A	1.306	1.00
183_G	223_R	1.304	1.00
114_V	128_V	1.295	1.00
278_L	311_F	1.290	1.00
16_V	311_F	1.282	1.00
18_E	21_E	1.281	1.00
53_P	169_A	1.279	1.00
69_V	74_T	1.279	1.00
153_D	156_H	1.276	1.00
226_V	236_A	1.267	1.00
343_G	388_D	1.264	1.00
284_V	311_F	1.260	1.00
389_C	396_T	1.256	1.00
70_R	111_D	1.248	1.00
42_D	214_S	1.248	1.00
317_K	322_A	1.245	1.00
24_L	318_A	1.242	1.00
235_T	239_E	1.241	1.00
41_A	174_V	1.241	1.00
100_V	104_S	1.236	1.00
72_A	111_D	1.233	1.00
194_A	207_G	1.229	1.00
133_A	136_A	1.229	1.00
249_T	294_V	1.228	1.00
310_Q	401_E	1.226	1.00
140_P	143_E	1.226	1.00
120_E	129_F	1.222	1.00
306_V	382_W	1.222	1.00
336_R	364_P	1.210	1.00
223_R	244_H	1.204	1.00
329_T	401_E	1.198	1.00
241_V	292_T	1.197	1.00
163_L	211_Q	1.191	1.00
16_V	278_L	1.191	1.00
99_R	116_I	1.190	1.00
163_L	207_G	1.187	1.00
362_V	381_G	1.185	1.00
285_A	296_A	1.180	1.00
17_A	345_R	1.179	1.00
60_E	108_A	1.173	1.00
181_T	221_T	1.171	1.00
352_R	362_V	1.166	1.00
230_E	234_R	1.166	1.00
216_W	313_R	1.161	1.00
238_R	268_L	1.158	1.00
22_R	272_L	1.150	1.00
26_A	286_L	1.149	1.00
88_G	91_S	1.148	1.00
184_V	213_V	1.146	1.00
206_G	222_R	1.144	1.00
149_Q	374_S	1.140	1.00
23_L	286_L	1.139	1.00
37_A	173_A	1.131	1.00
350_V	362_V	1.125	1.00
223_R	240_A	1.125	1.00
195_D	202_V	1.123	1.00
112_A	132_A	1.118	1.00
33_T	178_E	1.118	1.00
106_L	113_V	1.118	1.00
212_Y	309_V	1.118	1.00
115_M	137_N	1.110	1.00
33_T	47_A	1.109	1.00
91_S	189_E	1.109	1.00
158_L	163_L	1.107	1.00
352_R	380_D	1.105	1.00
42_D	163_L	1.104	1.00
99_R	257_A	1.095	1.00
157_R	322_A	1.084	1.00
347_F	384_V	1.080	1.00
234_R	268_L	1.076	1.00
185_L	226_V	1.075	1.00
36_V	41_A	1.075	1.00
334_L	338_I	1.074	1.00
71_A	134_G	1.069	1.00
121_R	124_D	1.062	1.00
45_V	157_R	1.059	1.00
187_T	261_V	1.055	1.00
382_W	403_W	1.054	1.00
247_V	292_T	1.054	1.00
160_P	215_R	1.052	1.00
385_V	392_Y	1.048	1.00
118_D	130_A	1.046	1.00
354_G	358_G	1.043	1.00
182_V	213_V	1.041	1.00
232_A	235_T	1.040	1.00
164_G	373_L	1.039	1.00
286_L	295_V	1.038	1.00
186_P	250_T	1.038	1.00
63_A	139_A	1.032	1.00
221_T	243_S	1.031	1.00
362_V	400_V	1.026	1.00
309_V	313_R	1.024	1.00
45_V	322_A	1.019	1.00
63_A	137_N	1.016	1.00
231_A	235_T	1.012	1.00
223_R	243_S	1.010	1.00
279_Q	346_S	1.008	1.00
349_R	368_G	1.008	1.00
119_A	128_V	1.008	1.00
352_R	400_V	1.006	1.00
84_V	96_E	1.000	1.00
13_R	282_H	0.999	1.00
64_M	115_M	0.993	1.00
263_E	266_A	0.992	1.00
87_V	98_V	0.984	1.00
213_V	308_A	0.983	1.00
64_M	137_N	0.978	1.00
14_T	22_R	0.978	1.00
272_L	288_V	0.977	1.00
182_V	218_G	0.971	1.00
101_H	258_R	0.971	1.00
92_V	98_V	0.957	0.99
218_G	316_L	0.957	0.99
352_R	381_G	0.952	0.99
185_L	236_A	0.951	0.99
364_P	383_V	0.948	0.99
246_V	293_P	0.946	0.99
41_A	158_L	0.939	0.99
336_R	394_A	0.938	0.99
48_A	171_V	0.936	0.99
336_R	363_T	0.933	0.99
309_V	327_H	0.932	0.99
44_R	179_R	0.928	0.99
101_H	257_A	0.927	0.99
210_A	214_S	0.926	0.99
262_P	274_H	0.926	0.99
351_T	378_L	0.926	0.99
203_E	206_G	0.923	0.99
70_R	94_P	0.922	0.99
178_E	245_D	0.921	0.99
184_V	220_P	0.915	0.99
177_Y	320_G	0.913	0.99
170_G	202_V	0.912	0.99
47_A	177_Y	0.909	0.99
278_L	307_N	0.906	0.99
162_D	377_A	0.902	0.99
22_R	25_S	0.902	0.99
234_R	264_V	0.901	0.99
236_A	239_E	0.901	0.99
52_A	169_A	0.900	0.99
67_F	119_A	0.897	0.99
80_R	85_L	0.892	0.99
42_D	211_Q	0.890	0.99
183_G	240_A	0.888	0.99
265_I	287_C	0.887	0.99
232_A	236_A	0.878	0.99
67_F	116_I	0.877	0.99
58_H	201_V	0.871	0.99
33_T	48_A	0.871	0.99
209_V	308_A	0.870	0.99
183_G	247_V	0.868	0.99
143_E	369_G	0.868	0.99
186_P	206_G	0.865	0.99
302_V	349_R	0.864	0.99
71_A	74_T	0.861	0.99
116_I	119_A	0.857	0.99
384_V	399_A	0.857	0.99
231_A	234_R	0.853	0.99
180_P	218_G	0.849	0.99
214_S	220_P	0.846	0.99
17_A	21_E	0.843	0.99
111_D	134_G	0.832	0.99
14_T	19_A	0.830	0.99
286_L	293_P	0.828	0.98
226_V	232_A	0.826	0.98
158_L	166_L	0.821	0.98
86_D	258_R	0.820	0.98
101_H	116_I	0.817	0.98
186_P	224_G	0.813	0.98
166_L	171_V	0.812	0.98
42_D	215_R	0.810	0.98
63_A	143_E	0.810	0.98
33_T	177_Y	0.809	0.98
203_E	207_G	0.808	0.98
367_A	372_V	0.808	0.98
43_G	215_R	0.807	0.98
74_T	112_A	0.805	0.98
122_R	125_R	0.805	0.98
273_V	286_L	0.805	0.98
238_R	290_D	0.803	0.98
354_G	360_P	0.803	0.98
18_E	22_R	0.803	0.98
69_V	114_V	0.803	0.98
60_E	106_L	0.799	0.98
230_E	233_L	0.798	0.98
297_L	312_L	0.798	0.98
212_Y	305_I	0.794	0.98
329_T	384_V	0.794	0.98
240_A	247_V	0.791	0.98
307_N	311_F	0.791	0.98
240_A	244_H	0.785	0.98
233_L	264_V	0.784	0.98
152_Y	156_H	0.782	0.98
214_S	219_V	0.781	0.98
73_D	95_G	0.779	0.98
210_A	220_P	0.773	0.98
105_E	198_P	0.772	0.98
282_H	303_A	0.772	0.98
139_A	298_P	0.771	0.98
44_R	176_V	0.769	0.98
193_A	203_E	0.767	0.98
144_D	372_V	0.766	0.98
298_P	303_A	0.766	0.98
288_V	291_D	0.765	0.97
185_L	247_V	0.763	0.97
30_L	319_V	0.762	0.97
246_V	319_V	0.761	0.97
350_V	400_V	0.759	0.97
276_V	284_V	0.759	0.97
86_D	257_A	0.755	0.97
78_G	81_S	0.750	0.97
254_S	283_P	0.748	0.97
192_V	197_G	0.745	0.97
31_A	178_E	0.744	0.97
189_E	227_T	0.742	0.97
50_V	175_A	0.742	0.97
154_A	177_Y	0.741	0.97
339_A	391_G	0.739	0.97
253_S	296_A	0.738	0.97
71_A	132_A	0.737	0.97
82_P	93_G	0.736	0.97
184_V	209_V	0.735	0.97
279_Q	344_T	0.732	0.97
333_V	395_G	0.728	0.97
288_V	293_P	0.728	0.97
310_Q	347_F	0.727	0.97
190_E	228_D	0.725	0.97
309_V	382_W	0.725	0.97
24_L	314_P	0.722	0.96
372_V	375_S	0.721	0.96
348_V	364_P	0.721	0.96
340_S	385_V	0.720	0.96
144_D	302_V	0.718	0.96
27_V	319_V	0.716	0.96
35_R	48_A	0.716	0.96
392_Y	396_T	0.716	0.96
145_V	151_L	0.715	0.96
122_R	127_D	0.715	0.96
284_V	307_N	0.714	0.96
193_A	207_G	0.714	0.96
350_V	380_D	0.711	0.96
82_P	125_R	0.710	0.96
362_V	383_V	0.709	0.96
52_A	55_A	0.709	0.96
381_G	403_W	0.702	0.96
277_A	387_E	0.702	0.96
233_L	260_H	0.699	0.96
242_D	290_D	0.696	0.96
50_V	171_V	0.695	0.96
241_V	247_V	0.695	0.96
289_V	293_P	0.694	0.96
186_P	225_V	0.694	0.96
186_P	203_E	0.694	0.96
330_T	360_P	0.693	0.96
386_P	389_C	0.693	0.96
112_A	134_G	0.685	0.95
81_S	87_V	0.683	0.95
101_H	104_S	0.682	0.95
67_F	121_R	0.681	0.95
274_H	285_A	0.680	0.95
83_V	121_R	0.678	0.95
369_G	372_V	0.677	0.95
23_L	315_L	0.677	0.95
262_P	266_A	0.675	0.95
213_V	216_W	0.674	0.95
337_K	391_G	0.672	0.95
72_A	134_G	0.671	0.95
230_E	260_H	0.670	0.95
271_V	285_A	0.669	0.95
92_V	96_E	0.667	0.95
261_V	294_V	0.666	0.94
102_T	117_E	0.665	0.94
67_F	126_V	0.663	0.94
172_D	194_A	0.662	0.94
58_H	142_G	0.661	0.94
224_G	236_A	0.660	0.94
237_I	247_V	0.659	0.94
49_D	156_H	0.659	0.94
365_T	379_A	0.659	0.94
248_V	308_A	0.657	0.94
262_P	285_A	0.657	0.94
22_R	26_A	0.655	0.94
15_R	277_A	0.653	0.94
191_L	203_E	0.651	0.94
212_Y	216_W	0.650	0.94
46_L	174_V	0.650	0.94
338_I	383_V	0.649	0.94
60_E	138_V	0.649	0.94
73_D	94_P	0.647	0.94
353_H	361_T	0.647	0.94
236_A	240_A	0.647	0.94
20_R	24_L	0.645	0.93
185_L	224_G	0.644	0.93
272_L	286_L	0.643	0.93
374_S	378_L	0.639	0.93
332_A	353_H	0.638	0.93
30_L	177_Y	0.638	0.93
238_R	242_D	0.637	0.93
70_R	110_A	0.636	0.93
56_V	144_D	0.636	0.93
249_T	253_S	0.636	0.93
264_V	268_L	0.635	0.93
271_V	287_C	0.635	0.93
56_V	145_V	0.634	0.93
196_P	202_V	0.634	0.93
249_T	261_V	0.633	0.93
30_L	178_E	0.633	0.93
335_A	353_H	0.629	0.93
143_E	371_G	0.628	0.93
210_A	222_R	0.627	0.92
102_T	283_P	0.627	0.92
71_A	75_F	0.627	0.92
315_L	319_V	0.626	0.92
67_F	97_A	0.624	0.92
39_G	210_A	0.623	0.92
203_E	225_V	0.622	0.92
59_Y	201_V	0.620	0.92
185_L	223_R	0.619	0.92
46_L	49_D	0.619	0.92
183_G	224_G	0.617	0.92
194_A	202_V	0.617	0.92
54_R	58_H	0.615	0.92
112_A	136_A	0.612	0.92
70_R	93_G	0.611	0.92
97_A	126_V	0.610	0.91
161_S	305_I	0.610	0.91
144_D	374_S	0.608	0.91
106_L	109_G	0.608	0.91
14_T	273_V	0.606	0.91
189_E	225_V	0.606	0.91
81_S	86_D	0.603	0.91
241_V	289_V	0.601	0.91
349_R	372_V	0.601	0.91
283_P	370_S	0.600	0.91
44_R	178_E	0.599	0.91
239_E	242_D	0.598	0.91
260_H	263_E	0.597	0.91
302_V	376_V	0.597	0.91
27_V	293_P	0.595	0.90
205_N	250_T	0.595	0.90
152_Y	166_L	0.595	0.90
384_V	387_E	0.594	0.90
26_A	288_V	0.594	0.90
209_V	248_V	0.593	0.90
208_T	304_A	0.593	0.90
237_I	264_V	0.591	0.90
340_S	346_S	0.589	0.90
82_P	124_D	0.588	0.90
74_T	132_A	0.588	0.90
356_E	361_T	0.586	0.90
181_T	244_H	0.586	0.90
282_H	344_T	0.586	0.90
82_P	86_D	0.585	0.90
144_D	168_S	0.585	0.90
350_V	398_V	0.584	0.90
62_A	300_Y	0.583	0.90
15_R	387_E	0.582	0.89
353_H	356_E	0.581	0.89
183_G	221_T	0.581	0.89
137_N	143_E	0.580	0.89
298_P	346_S	0.580	0.89
191_L	202_V	0.580	0.89
264_V	267_D	0.579	0.89
379_A	403_W	0.576	0.89
39_G	214_S	0.575	0.89
167_K	207_G	0.574	0.89
76_G	131_A	0.574	0.89
139_A	262_P	0.573	0.89
213_V	219_V	0.572	0.89
178_E	181_T	0.570	0.88
114_V	132_A	0.568	0.88
193_A	225_V	0.567	0.88
151_L	165_L	0.567	0.88
217_G	220_P	0.566	0.88
187_T	228_D	0.566	0.88
24_L	27_V	0.563	0.88
317_K	320_G	0.562	0.88
119_A	129_F	0.562	0.88
126_V	129_F	0.561	0.88
189_E	258_R	0.561	0.88
61_R	371_G	0.560	0.88
259_D	282_H	0.559	0.88
61_R	262_P	0.559	0.88
16_V	345_R	0.554	0.87
29_P	318_A	0.553	0.87
300_Y	370_S	0.552	0.87
74_T	128_V	0.552	0.87
293_P	315_L	0.551	0.87
64_M	139_A	0.551	0.87
303_A	370_S	0.550	0.87
74_T	79_D	0.550	0.87
322_A	325_T	0.549	0.87
334_L	396_T	0.548	0.86
362_V	398_V	0.548	0.86
39_G	42_D	0.548	0.86
46_L	156_H	0.547	0.86
255_V	275_G	0.547	0.86
287_C	296_A	0.545	0.86
62_A	100_V	0.544	0.86
149_Q	378_L	0.544	0.86
226_V	233_L	0.543	0.86
252_G	261_V	0.543	0.86
263_E	267_D	0.541	0.86
64_M	282_H	0.536	0.85
58_H	141_I	0.535	0.85
101_H	253_S	0.535	0.85
334_L	398_V	0.535	0.85
213_V	316_L	0.532	0.85
16_V	20_R	0.531	0.85
29_P	319_V	0.531	0.85
115_M	136_A	0.529	0.85
216_W	317_K	0.528	0.84
316_L	320_G	0.527	0.84
139_A	300_Y	0.526	0.84
31_A	177_Y	0.526	0.84
256_G	299_G	0.526	0.84
73_D	110_A	0.526	0.84
92_V	95_G	0.526	0.84
20_R	311_F	0.525	0.84
59_Y	104_S	0.525	0.84
330_T	400_V	0.525	0.84
228_D	252_G	0.523	0.84
389_C	392_Y	0.520	0.84
266_A	270_T	0.519	0.83
102_T	190_E	0.519	0.83
156_H	159_R	0.519	0.83
130_A	136_A	0.519	0.83
71_A	138_V	0.518	0.83
85_L	90_G	0.518	0.83
180_P	319_V	0.517	0.83
85_L	89_T	0.516	0.83
210_A	213_V	0.515	0.83
293_P	319_V	0.515	0.83
250_T	304_A	0.514	0.83
64_M	102_T	0.514	0.83
345_R	386_P	0.513	0.83
244_H	247_V	0.511	0.82
106_L	110_A	0.511	0.82
191_L	201_V	0.510	0.82
53_P	147_D	0.510	0.82
241_V	290_D	0.510	0.82
392_Y	398_V	0.509	0.82
86_D	96_E	0.509	0.82
84_V	92_V	0.508	0.82
241_V	294_V	0.507	0.82
72_A	94_P	0.507	0.82
48_A	154_A	0.507	0.82
81_S	90_G	0.506	0.82
61_R	298_P	0.506	0.82
161_S	373_L	0.505	0.82
352_R	402_Q	0.505	0.82
153_D	323_P	0.505	0.82
313_R	327_H	0.505	0.82
327_H	401_E	0.505	0.82
283_P	298_P	0.504	0.82
26_A	270_T	0.503	0.81
349_R	375_S	0.503	0.81
61_R	101_H	0.503	0.81
240_A	243_S	0.503	0.81
34_A	179_R	0.503	0.81
310_Q	382_W	0.503	0.81
16_V	310_Q	0.502	0.81
247_V	294_V	0.502	0.81
89_T	253_S	0.501	0.81
346_S	349_R	0.501	0.81
383_V	400_V	0.501	0.81
53_P	202_V	0.500	0.81

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1g8lA	2	0.9681	100	0.142	Contact Map
1uz5A	1	0.9337	100	0.16	Contact Map
4pd0A	2	0.9607	100	0.165	Contact Map
1wu2A	2	0.9115	100	0.173	Contact Map
3rfqA	5	0.3538	100	0.675	Contact Map
1jljA	3	0.3735	100	0.684	Contact Map
4lhbA	4	0.3514	100	0.703	Contact Map
3iwtA	4	0.3661	100	0.709	Contact Map
1y5eA	4	0.3563	100	0.71	Contact Map
4xcwA	3	0.3907	100	0.713	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0117 seconds.