Q9HSM3 - HALSA - GREMLIN Contacts

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Q9HSM3 - Medium-chain acyl-CoA ligase

UniProt:	Q9HSM3	Sequences: MERRAQRGGRRRPELAGRCLRCRAATHRPCEGSPWALALICTALGVPTPQTTITDVCDGGGVMHRPLLVTDFIDRARTYYGDETAVVATTGRRYTYSELADRADRFSAVLQAAGIDSGDRVAVLDPNTHYHLEAAYGAMQLGAIHTPLNYRLTPDDYAYILADAGADAIYADAAYADRVEAVRDQIPTTTFITDDPAAVDGDWQDADALLADADPDDYDRPDMAEDDVITINYTSGTTGDPKGVCRTHRNEVVHALLLSTHHTITDTDTYLWTLPMFHANGWGHIFAITGAGATHVCTRGVDAASVFDTIQAEAVSYLCAAPTVLNMLLDYHEAHDVAATGDADVRVATAGSAPPEATIRAVESALDWSLMHVYGATETGPLIATSDADRLLAAGGGSRAAMQKRQGIGLLGTELRVVDEHGNDVPRDNETIGEIVVSGNQVMDRYWNKPDATERAFTDRVDGYFHMGDFAVVDDTGFVSILDRKKDIIISGGENISSIELEDTLFEHDAVGEVAVVPSPHDDWGETPKAFVVPASGDPNNPGVTTTALVEYTRAELASFKTVRRVEFVDELPTTATGKVQKYELRAAEFADEESLVGQG	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	600 (496)
Sequences:	70209 (50103)
Seq/√Len:	2249.7

ECOLI - ENTF AAS ACSA PRPE LCFA FADK ENTE CAIC MENE PAAK
BACSU - SRFAC PPSE PPSB PPSC ACSA DHBE LCFA YNGI LCFB YDAB YTCI MENE YHFT DLTA DHBF PKSJ PKSN SRFAA SRFAB PPSA PPSD
HALSA - Q9HSM3 Q9HRY8 Q9HQU8 Q9HNK0 Q9HQ43 Q9HQN8
SULSO - Q97UX8 Q97WQ0 Q97U22 Q97WQ9 Q97VT6 Q97UW7 Q97YK9 Q97VU7 Q97WK0 Q97XW4 Q97UF6 Q97V27 Q97WS5 Q980E4 Q97X52 Q97XW5

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
228_V	245_C	3.909	1.00
435_I	471_A	3.139	1.00
508_H	552_Y	3.114	1.00
104_D	140_Q	2.916	1.00
414_E	438_S	2.907	1.00
449_K	452_A	2.903	1.00
163_D	233_Y	2.902	1.00
247_T	444_D	2.794	1.00
115_I	143_A	2.773	1.00
119_D	167_D	2.771	1.00
122_A	166_A	2.747	1.00
100_A	140_Q	2.718	1.00
472_V	480_S	2.652	1.00
87_V	294_T	2.585	1.00
269_T	294_T	2.444	1.00
120_R	146_T	2.414	1.00
434_E	466_H	2.400	1.00
84_T	93_R	2.394	1.00
165_G	448_N	2.393	1.00
490_I	495_N	2.370	1.00
513_E	574_T	2.326	1.00
74_D	100_A	2.297	1.00
80_Y	83_E	2.295	1.00
416_R	424_D	2.279	1.00
109_V	113_A	2.269	1.00
505_L	530_A	2.261	1.00
418_V	436_V	2.255	1.00
432_I	470_F	2.242	1.00
506_F	514_V	2.242	1.00
134_A	170_Y	2.167	1.00
163_D	449_K	2.152	1.00
102_R	133_E	2.132	1.00
419_D	423_N	2.132	1.00
76_A	80_Y	2.124	1.00
308_D	312_A	2.121	1.00
159_Y	240_D	2.084	1.00
436_V	466_H	2.050	1.00
507_E	556_E	2.040	1.00
268_D	346_R	2.033	1.00
100_A	104_D	2.026	1.00
474_D	480_S	2.021	1.00
529_K	567_E	1.993	1.00
581_Q	584_E	1.985	1.00
224_A	227_D	1.980	1.00
452_A	455_R	1.959	1.00
487_D	582_K	1.940	1.00
405_R	480_S	1.940	1.00
138_A	143_A	1.935	1.00
106_F	133_E	1.907	1.00
450_P	454_E	1.891	1.00
268_D	316_S	1.876	1.00
117_S	227_D	1.860	1.00
474_D	478_F	1.843	1.00
82_D	97_S	1.827	1.00
158_A	162_A	1.822	1.00
87_V	93_R	1.816	1.00
118_G	227_D	1.814	1.00
191_F	195_D	1.810	1.00
472_V	482_L	1.792	1.00
356_E	360_R	1.790	1.00
116_D	119_D	1.785	1.00
111_Q	141_L	1.774	1.00
103_A	140_Q	1.766	1.00
416_R	436_V	1.751	1.00
87_V	313_E	1.727	1.00
473_V	479_V	1.708	1.00
500_E	561_K	1.690	1.00
75_R	79_Y	1.678	1.00
432_I	482_L	1.678	1.00
296_V	315_V	1.676	1.00
97_S	101_D	1.675	1.00
584_E	587_A	1.672	1.00
491_S	496_I	1.664	1.00
314_A	344_D	1.658	1.00
247_T	250_N	1.655	1.00
67_L	75_R	1.649	1.00
126_P	172_D	1.648	1.00
506_F	513_E	1.647	1.00
132_L	285_I	1.640	1.00
502_E	516_V	1.636	1.00
139_M	229_I	1.614	1.00
512_G	535_A	1.612	1.00
427_R	473_V	1.607	1.00
517_V	531_F	1.586	1.00
531_F	585_L	1.575	1.00
228_V	444_D	1.569	1.00
95_T	98_E	1.568	1.00
122_A	148_L	1.564	1.00
516_V	530_A	1.559	1.00
545_T	548_A	1.557	1.00
451_D	455_R	1.555	1.00
417_V	471_A	1.555	1.00
458_T	466_H	1.545	1.00
533_V	572_L	1.543	1.00
109_V	209_L	1.540	1.00
369_S	387_D	1.525	1.00
94_Y	133_E	1.517	1.00
510_A	548_A	1.512	1.00
167_D	190_T	1.509	1.00
305_S	308_D	1.508	1.00
88_A	129_H	1.506	1.00
104_D	108_A	1.506	1.00
88_A	91_G	1.499	1.00
76_A	79_Y	1.494	1.00
259_S	291_A	1.490	1.00
504_T	556_E	1.487	1.00
383_I	437_V	1.485	1.00
320_A	325_L	1.478	1.00
552_Y	556_E	1.477	1.00
83_E	267_T	1.475	1.00
84_T	87_V	1.475	1.00
74_D	140_Q	1.470	1.00
226_D	249_R	1.462	1.00
81_G	97_S	1.461	1.00
164_A	233_Y	1.454	1.00
120_R	144_I	1.443	1.00
532_V	568_F	1.440	1.00
84_T	294_T	1.439	1.00
231_I	447_W	1.432	1.00
250_N	380_G	1.431	1.00
360_R	364_S	1.428	1.00
325_L	347_V	1.420	1.00
77_R	100_A	1.419	1.00
121_V	138_A	1.419	1.00
271_L	315_V	1.418	1.00
233_Y	243_G	1.412	1.00
205_D	208_A	1.411	1.00
288_I	293_A	1.410	1.00
443_M	457_F	1.406	1.00
534_P	568_F	1.402	1.00
547_T	551_E	1.396	1.00
376_A	465_F	1.396	1.00
550_V	566_V	1.395	1.00
94_Y	129_H	1.391	1.00
245_C	445_R	1.390	1.00
510_A	538_D	1.388	1.00
471_A	481_I	1.386	1.00
426_P	431_T	1.385	1.00
311_Q	340_T	1.384	1.00
260_T	411_L	1.382	1.00
323_T	352_S	1.382	1.00
245_C	447_W	1.380	1.00
575_T	581_Q	1.374	1.00
384_A	415_L	1.367	1.00
161_L	166_A	1.366	1.00
268_D	317_Y	1.363	1.00
532_V	566_V	1.359	1.00
402_M	476_T	1.358	1.00
121_V	143_A	1.354	1.00
419_D	425_V	1.354	1.00
302_D	305_S	1.350	1.00
415_L	437_V	1.346	1.00
458_T	462_D	1.337	1.00
85_A	99_L	1.337	1.00
269_T	296_V	1.332	1.00
118_G	444_D	1.331	1.00
122_A	161_L	1.321	1.00
432_I	472_V	1.319	1.00
438_S	464_Y	1.318	1.00
456_A	465_F	1.315	1.00
298_T	309_T	1.314	1.00
225_E	249_R	1.312	1.00
163_D	448_N	1.298	1.00
146_T	164_A	1.291	1.00
470_F	485_K	1.291	1.00
120_R	231_I	1.289	1.00
550_V	554_R	1.288	1.00
309_T	313_E	1.285	1.00
546_T	568_F	1.282	1.00
551_E	555_A	1.274	1.00
408_I	478_F	1.270	1.00
265_T	268_D	1.269	1.00
115_I	119_D	1.265	1.00
144_I	228_V	1.259	1.00
489_I	498_S	1.256	1.00
420_E	485_K	1.255	1.00
115_I	121_V	1.253	1.00
269_T	315_V	1.244	1.00
154_P	178_R	1.240	1.00
102_R	105_R	1.236	1.00
249_R	440_N	1.227	1.00
136_Y	289_T	1.226	1.00
519_S	529_K	1.225	1.00
120_R	447_W	1.223	1.00
531_F	569_V	1.221	1.00
123_V	134_A	1.220	1.00
100_A	218_Y	1.220	1.00
154_P	181_A	1.219	1.00
106_F	137_G	1.218	1.00
318_L	345_V	1.213	1.00
349_T	354_P	1.213	1.00
159_Y	163_D	1.210	1.00
529_K	565_R	1.206	1.00
68_L	71_D	1.206	1.00
534_P	544_V	1.204	1.00
554_R	562_T	1.203	1.00
93_R	313_E	1.197	1.00
310_I	344_D	1.196	1.00
513_E	533_V	1.194	1.00
520_P	526_E	1.186	1.00
101_D	105_R	1.183	1.00
245_C	444_D	1.178	1.00
280_N	319_C	1.177	1.00
163_D	240_D	1.176	1.00
546_T	550_V	1.176	1.00
521_H	527_T	1.174	1.00
137_G	141_L	1.172	1.00
409_G	415_L	1.168	1.00
552_Y	555_A	1.167	1.00
223_M	227_D	1.167	1.00
518_P	526_E	1.165	1.00
494_E	560_F	1.163	1.00
499_I	503_D	1.160	1.00
402_M	478_F	1.156	1.00
330_D	361_A	1.154	1.00
435_I	481_I	1.153	1.00
554_R	559_S	1.150	1.00
416_R	464_Y	1.142	1.00
434_E	485_K	1.141	1.00
386_S	478_F	1.135	1.00
154_P	158_A	1.134	1.00
234_T	244_V	1.134	1.00
231_I	243_G	1.133	1.00
99_L	136_Y	1.133	1.00
425_V	431_T	1.125	1.00
546_T	566_V	1.120	1.00
527_T	564_R	1.119	1.00
531_F	586_R	1.113	1.00
162_A	240_D	1.112	1.00
109_V	112_A	1.106	1.00
92_R	129_H	1.102	1.00
74_D	104_D	1.101	1.00
98_E	101_D	1.101	1.00
530_A	566_V	1.100	1.00
106_F	170_Y	1.099	1.00
102_R	130_Y	1.098	1.00
487_D	499_I	1.097	1.00
85_A	96_Y	1.095	1.00
148_L	157_Y	1.094	1.00
94_Y	102_R	1.087	1.00
131_H	276_M	1.077	1.00
326_N	358_T	1.075	1.00
250_N	442_V	1.073	1.00
115_I	168_A	1.069	1.00
362_V	366_L	1.067	1.00
569_V	572_L	1.067	1.00
124_L	157_Y	1.066	1.00
176_A	180_E	1.065	1.00
527_T	565_R	1.065	1.00
355_P	358_T	1.064	1.00
90_T	299_R	1.064	1.00
226_D	247_T	1.063	1.00
246_R	250_N	1.063	1.00
413_T	441_Q	1.057	1.00
553_T	562_T	1.057	1.00
304_A	331_Y	1.055	1.00
87_V	296_V	1.052	1.00
406_Q	481_I	1.050	1.00
488_I	497_S	1.048	1.00
436_V	458_T	1.047	1.00
67_L	71_D	1.045	1.00
156_D	561_K	1.044	1.00
107_S	140_Q	1.037	1.00
452_A	456_A	1.035	1.00
88_A	92_R	1.035	1.00
103_A	137_G	1.028	1.00
269_T	316_S	1.027	1.00
99_L	133_E	1.027	1.00
296_V	309_T	1.022	1.00
296_V	313_E	1.016	1.00
548_A	551_E	1.014	1.00
268_D	293_A	1.013	1.00
386_S	405_R	1.012	1.00
504_T	553_T	1.001	1.00
329_L	361_A	1.001	1.00
572_L	580_V	1.000	1.00
519_S	565_R	0.997	1.00
436_V	464_Y	0.997	1.00
531_F	589_E	0.995	1.00
437_V	467_M	0.990	1.00
119_D	143_A	0.987	1.00
159_Y	233_Y	0.987	1.00
508_H	549_L	0.986	1.00
384_A	479_V	0.985	1.00
270_Y	288_I	0.981	1.00
502_E	582_K	0.981	1.00
83_E	294_T	0.981	1.00
274_L	280_N	0.980	1.00
569_V	588_A	0.979	1.00
155_D	556_E	0.978	1.00
558_A	561_K	0.974	1.00
253_V	412_G	0.970	1.00
515_A	572_L	0.969	1.00
244_V	443_M	0.969	1.00
489_I	528_P	0.968	1.00
508_H	548_A	0.963	1.00
504_T	507_E	0.962	1.00
417_V	425_V	0.960	1.00
120_R	165_G	0.958	1.00
235_S	577_T	0.957	1.00
492_G	524_W	0.956	1.00
94_Y	99_L	0.956	1.00
232_N	377_T	0.951	1.00
551_E	554_R	0.950	1.00
512_G	533_V	0.947	1.00
86_V	132_L	0.944	1.00
109_V	213_A	0.940	1.00
92_R	102_R	0.939	1.00
583_Y	587_A	0.938	1.00
110_L	138_A	0.938	1.00
415_L	479_V	0.937	1.00
73_I	77_R	0.937	1.00
415_L	435_I	0.936	1.00
584_E	588_A	0.935	1.00
470_F	483_D	0.933	1.00
520_P	523_D	0.931	1.00
125_D	128_T	0.925	1.00
354_P	359_I	0.925	1.00
361_A	365_A	0.924	1.00
439_G	442_V	0.923	1.00
152_L	160_I	0.923	1.00
507_E	552_Y	0.923	1.00
491_S	518_P	0.921	1.00
428_D	431_T	0.918	1.00
149_N	277_F	0.917	1.00
112_A	212_D	0.915	1.00
122_A	169_I	0.915	1.00
405_R	478_F	0.914	1.00
84_T	95_T	0.914	1.00
253_V	440_N	0.914	1.00
254_H	381_P	0.913	1.00
106_F	134_A	0.910	1.00
419_D	431_T	0.909	1.00
159_Y	162_A	0.908	1.00
99_L	103_A	0.907	1.00
357_A	361_A	0.905	1.00
271_L	298_T	0.897	1.00
155_D	159_Y	0.894	1.00
348_A	373_V	0.894	1.00
113_A	168_A	0.893	1.00
327_M	523_D	0.889	1.00
129_H	133_E	0.886	1.00
108_A	111_Q	0.882	1.00
155_D	158_A	0.882	1.00
159_Y	449_K	0.879	1.00
255_A	290_G	0.876	1.00
177_D	180_E	0.875	1.00
115_I	141_L	0.875	1.00
135_A	145_H	0.873	1.00
288_I	295_H	0.870	1.00
101_D	216_D	0.869	1.00
70_T	223_M	0.866	1.00
111_Q	116_D	0.862	1.00
108_A	219_D	0.857	1.00
361_A	364_S	0.855	1.00
100_A	103_A	0.853	1.00
126_P	174_A	0.853	1.00
319_C	382_L	0.850	1.00
110_L	170_Y	0.847	1.00
267_T	316_S	0.845	1.00
112_A	213_A	0.845	1.00
549_L	566_V	0.844	1.00
246_R	380_G	0.844	1.00
98_E	102_R	0.842	1.00
172_D	175_Y	0.841	1.00
548_A	552_Y	0.840	1.00
87_V	269_T	0.838	1.00
326_N	355_P	0.836	1.00
417_V	479_V	0.834	1.00
75_R	78_T	0.834	1.00
325_L	362_V	0.832	1.00
123_V	145_H	0.830	1.00
86_V	129_H	0.829	1.00
175_Y	178_R	0.826	1.00
138_A	145_H	0.826	1.00
279_A	376_A	0.825	1.00
435_I	479_V	0.822	1.00
544_V	548_A	0.821	1.00
246_R	443_M	0.819	1.00
74_D	78_T	0.814	1.00
130_Y	133_E	0.812	1.00
229_I	248_H	0.811	1.00
420_E	434_E	0.810	1.00
449_K	453_T	0.807	1.00
379_T	465_F	0.806	1.00
132_L	297_C	0.800	1.00
108_A	214_D	0.800	1.00
72_F	256_L	0.798	1.00
279_A	381_P	0.798	1.00
451_D	454_E	0.797	1.00
107_S	141_L	0.796	1.00
402_M	474_D	0.796	1.00
83_E	266_D	0.795	1.00
491_S	564_R	0.794	1.00
135_A	282_W	0.793	1.00
122_A	146_T	0.791	1.00
71_D	75_R	0.789	1.00
92_R	130_Y	0.787	1.00
228_V	247_T	0.784	1.00
457_F	466_H	0.782	1.00
418_V	424_D	0.781	1.00
269_T	314_A	0.779	1.00
544_V	549_L	0.778	1.00
73_I	136_Y	0.777	1.00
273_T	324_V	0.775	1.00
133_E	137_G	0.775	1.00
515_A	585_L	0.773	1.00
422_G	436_V	0.772	1.00
70_T	248_H	0.771	1.00
311_Q	341_G	0.770	1.00
510_A	535_A	0.768	1.00
99_L	132_L	0.766	1.00
321_A	324_V	0.766	1.00
304_A	308_D	0.765	1.00
160_I	243_G	0.763	1.00
379_T	442_V	0.762	1.00
146_T	166_A	0.761	1.00
414_E	464_Y	0.752	1.00
138_A	141_L	0.752	1.00
133_E	206_A	0.749	1.00
105_R	109_V	0.748	1.00
72_F	76_A	0.747	1.00
533_V	571_E	0.747	1.00
155_D	240_D	0.744	1.00
458_T	464_Y	0.743	1.00
316_S	346_R	0.743	1.00
173_A	195_D	0.742	1.00
325_L	349_T	0.740	1.00
416_R	438_S	0.739	1.00
230_T	246_R	0.738	1.00
108_A	218_Y	0.737	1.00
415_L	471_A	0.735	1.00
71_D	74_D	0.734	1.00
102_R	129_H	0.734	1.00
283_G	319_C	0.734	1.00
223_M	248_H	0.734	1.00
379_T	437_V	0.731	1.00
229_I	251_E	0.729	1.00
487_D	502_E	0.728	1.00
113_A	190_T	0.727	1.00
70_T	139_M	0.725	1.00
432_I	485_K	0.725	1.00
550_V	562_T	0.724	1.00
357_A	360_R	0.724	1.00
80_Y	97_S	0.722	1.00
124_L	169_I	0.722	1.00
515_A	580_V	0.721	1.00
529_K	589_E	0.721	1.00
333_E	361_A	0.718	1.00
553_T	557_L	0.716	1.00
547_T	550_V	0.716	1.00
73_I	100_A	0.714	1.00
347_V	362_V	0.713	1.00
531_F	588_A	0.713	1.00
340_T	343_A	0.711	1.00
326_N	361_A	0.711	1.00
310_I	315_V	0.711	1.00
505_L	514_V	0.710	1.00
354_P	370_L	0.710	1.00
134_A	138_A	0.710	1.00
280_N	350_A	0.708	1.00
372_H	404_K	0.708	1.00
427_R	475_D	0.707	1.00
82_D	95_T	0.703	1.00
301_V	324_V	0.703	1.00
77_R	81_G	0.702	1.00
169_I	179_V	0.702	1.00
116_D	167_D	0.702	1.00
178_R	181_A	0.701	1.00
93_R	294_T	0.700	1.00
379_T	383_I	0.699	1.00
135_A	139_M	0.699	1.00
254_H	380_G	0.698	1.00
298_T	306_V	0.698	1.00
308_D	311_Q	0.698	1.00
510_A	534_P	0.697	1.00
373_V	382_L	0.697	1.00
108_A	217_D	0.697	1.00
326_N	330_D	0.695	1.00
125_D	131_H	0.695	1.00
278_H	494_E	0.695	1.00
273_T	321_A	0.695	1.00
466_H	485_K	0.693	1.00
106_F	110_L	0.693	1.00
122_A	164_A	0.693	1.00
319_C	373_V	0.693	1.00
453_T	457_F	0.692	1.00
363_E	390_R	0.691	1.00
208_A	211_A	0.689	1.00
104_D	218_Y	0.688	1.00
308_D	340_T	0.688	1.00
422_G	458_T	0.687	1.00
116_D	143_A	0.687	1.00
145_H	282_W	0.687	1.00
587_A	590_F	0.686	1.00
471_A	479_V	0.684	1.00
111_Q	221_P	0.684	1.00
265_T	346_R	0.683	1.00
521_H	525_G	0.682	1.00
371_M	387_D	0.682	1.00
271_L	309_T	0.681	1.00
546_T	565_R	0.681	1.00
521_H	524_W	0.681	1.00
128_T	172_D	0.681	1.00
305_S	309_T	0.680	1.00
76_A	292_G	0.679	1.00
121_V	168_A	0.678	1.00
498_S	516_V	0.676	1.00
254_H	283_G	0.676	1.00
124_L	175_Y	0.674	1.00
491_S	528_P	0.673	1.00
259_S	287_A	0.672	1.00
459_D	462_D	0.671	1.00
264_I	317_Y	0.670	1.00
173_A	196_P	0.668	1.00
210_L	213_A	0.667	1.00
532_V	549_L	0.667	1.00
125_D	170_Y	0.666	1.00
519_S	527_T	0.662	1.00
504_T	552_Y	0.661	1.00
550_V	553_T	0.661	1.00
70_T	74_D	0.658	1.00
165_G	447_W	0.658	1.00
331_Y	334_A	0.658	1.00
72_F	252_V	0.658	1.00
471_A	482_L	0.657	1.00
498_S	582_K	0.656	1.00
66_P	249_R	0.655	1.00
163_D	447_W	0.655	1.00
499_I	502_E	0.650	1.00
428_D	475_D	0.650	1.00
417_V	473_V	0.649	1.00
207_D	211_A	0.649	1.00
410_L	413_T	0.649	1.00
374_Y	383_I	0.649	1.00
105_R	216_D	0.646	1.00
326_N	357_A	0.645	1.00
125_D	195_D	0.644	1.00
107_S	137_G	0.644	1.00
310_I	318_L	0.644	1.00
442_V	465_F	0.643	1.00
226_D	444_D	0.642	1.00
559_S	562_T	0.642	1.00
261_H	411_L	0.641	1.00
270_Y	317_Y	0.640	1.00
105_R	214_D	0.640	1.00
117_S	221_P	0.639	1.00
417_V	435_I	0.639	1.00
68_L	248_H	0.638	1.00
114_G	143_A	0.638	1.00
111_Q	219_D	0.638	1.00
250_N	444_D	0.636	1.00
111_Q	220_R	0.636	1.00
106_F	109_V	0.635	1.00
125_D	134_A	0.634	1.00
284_H	319_C	0.631	1.00
517_V	589_E	0.631	1.00
120_R	448_N	0.628	1.00
171_A	175_Y	0.628	1.00
512_G	534_P	0.628	1.00
264_I	268_D	0.627	1.00
78_T	100_A	0.624	1.00
179_V	182_V	0.624	1.00
117_S	223_M	0.624	1.00
209_L	213_A	0.624	1.00
130_Y	172_D	0.623	1.00
254_H	382_L	0.623	1.00
136_Y	286_F	0.623	1.00
511_V	532_V	0.622	1.00
272_W	284_H	0.622	1.00
271_L	310_I	0.621	1.00
311_Q	343_A	0.620	1.00
108_A	216_D	0.619	1.00
135_A	286_F	0.618	1.00
264_I	293_A	0.617	1.00
144_I	231_I	0.615	1.00
180_E	183_R	0.614	1.00
491_S	524_W	0.612	1.00
110_L	168_A	0.612	1.00
102_R	210_L	0.611	1.00
573_P	585_L	0.610	1.00
162_A	188_T	0.610	1.00
347_V	368_W	0.608	1.00
353_A	481_I	0.607	1.00
486_K	526_E	0.607	1.00
240_D	449_K	0.607	1.00
94_Y	98_E	0.606	1.00
274_L	319_C	0.606	1.00
443_M	456_A	0.604	1.00
96_Y	293_A	0.603	1.00
125_D	172_D	0.602	1.00
515_A	582_K	0.601	1.00
146_T	233_Y	0.601	1.00
124_L	178_R	0.600	1.00
163_D	243_G	0.599	1.00
511_V	514_V	0.599	1.00
153_T	156_D	0.598	1.00
144_I	447_W	0.598	1.00
318_L	347_V	0.597	1.00
526_E	586_R	0.596	1.00
113_A	204_Q	0.596	1.00
72_F	290_G	0.596	1.00
103_A	106_F	0.595	1.00
272_W	295_H	0.594	1.00
86_V	295_H	0.593	1.00
545_T	568_F	0.591	1.00
449_K	455_R	0.591	1.00
531_F	567_E	0.591	1.00
105_R	108_A	0.590	1.00
505_L	553_T	0.589	1.00
363_E	369_S	0.589	1.00
517_V	586_R	0.588	1.00
384_A	406_Q	0.587	1.00
120_R	166_A	0.587	1.00
103_A	107_S	0.586	1.00
418_V	464_Y	0.586	1.00
80_Y	266_D	0.586	1.00
311_Q	344_D	0.585	1.00
171_A	176_A	0.584	1.00
437_V	442_V	0.584	1.00
275_P	278_H	0.583	1.00
301_V	306_V	0.583	1.00
108_A	213_A	0.583	1.00
111_Q	218_Y	0.582	1.00
376_A	379_T	0.581	1.00
501_L	528_P	0.581	1.00
294_T	313_E	0.580	1.00
255_A	286_F	0.579	1.00
319_C	350_A	0.579	1.00
80_Y	292_G	0.579	1.00
354_P	372_H	0.578	1.00
406_Q	471_A	0.578	1.00
424_D	436_V	0.578	1.00
270_Y	293_A	0.577	1.00
91_G	312_A	0.576	1.00
135_A	285_I	0.576	1.00
70_T	140_Q	0.574	1.00
187_P	190_T	0.574	1.00
309_T	312_A	0.573	1.00
106_F	206_A	0.571	1.00
258_L	283_G	0.571	1.00
256_L	290_G	0.571	1.00
504_T	557_L	0.571	1.00
387_D	390_R	0.571	1.00
115_I	167_D	0.570	1.00
254_H	258_L	0.570	1.00
283_G	382_L	0.570	1.00
491_S	526_E	0.570	1.00
567_E	588_A	0.569	1.00
512_G	536_S	0.569	1.00
272_W	297_C	0.568	1.00
239_G	497_S	0.568	1.00
360_R	363_E	0.567	1.00
306_V	310_I	0.565	1.00
156_D	500_E	0.564	1.00
125_D	171_A	0.564	1.00
191_F	194_D	0.563	1.00
454_E	459_D	0.562	1.00
147_P	232_N	0.561	1.00
230_T	282_W	0.560	1.00
124_L	179_V	0.560	1.00
376_A	467_M	0.559	1.00
171_A	179_V	0.558	1.00
84_T	269_T	0.557	1.00
186_I	189_T	0.557	1.00
445_R	450_P	0.556	1.00
424_D	473_V	0.556	1.00
230_T	251_E	0.554	1.00
502_E	530_A	0.554	1.00
280_N	348_A	0.553	1.00
389_D	392_L	0.552	1.00
277_F	494_E	0.551	1.00
513_E	572_L	0.551	1.00
123_V	138_A	0.551	1.00
358_T	361_A	0.551	1.00
322_P	352_S	0.550	1.00
273_T	320_A	0.549	1.00
255_A	287_A	0.547	1.00
510_A	552_Y	0.546	1.00
256_L	260_T	0.545	1.00
350_A	382_L	0.545	1.00
104_D	111_Q	0.545	1.00
165_G	188_T	0.545	1.00
71_D	222_D	0.544	1.00
109_V	210_L	0.544	1.00
338_A	365_A	0.542	1.00
231_I	245_C	0.542	1.00
218_Y	221_P	0.540	1.00
503_D	507_E	0.540	1.00
123_V	131_H	0.539	1.00
483_D	498_S	0.539	1.00
490_I	497_S	0.538	1.00
510_A	544_V	0.536	1.00
164_A	231_I	0.534	1.00
88_A	299_R	0.532	1.00
316_S	344_D	0.532	1.00
373_V	385_T	0.530	1.00
280_N	381_P	0.530	1.00
508_H	511_V	0.530	1.00
307_F	332_H	0.529	1.00
110_L	143_A	0.528	1.00
349_T	370_L	0.528	1.00
450_P	453_T	0.528	1.00
314_A	341_G	0.526	1.00
505_L	516_V	0.523	1.00
362_V	370_L	0.523	1.00
350_A	373_V	0.522	1.00
457_F	465_F	0.522	1.00
227_D	248_H	0.522	1.00
489_I	518_P	0.522	1.00
256_L	259_S	0.522	1.00
152_L	277_F	0.521	1.00
86_V	94_Y	0.520	1.00
334_A	365_A	0.520	1.00
164_A	243_G	0.520	1.00
310_I	314_A	0.517	1.00
272_W	281_G	0.516	1.00
269_T	272_W	0.516	1.00
96_Y	289_T	0.515	1.00
148_L	161_L	0.514	1.00
261_H	387_D	0.514	1.00
372_H	406_Q	0.513	1.00
257_L	410_L	0.512	1.00
144_I	147_P	0.511	1.00
271_L	306_V	0.510	1.00
307_F	342_D	0.510	1.00
514_V	553_T	0.509	1.00
387_D	408_I	0.509	1.00
520_P	525_G	0.509	1.00
73_I	103_A	0.508	1.00
320_A	347_V	0.508	1.00
280_N	373_V	0.506	1.00
519_S	531_F	0.506	1.00
306_V	324_V	0.505	1.00
84_T	88_A	0.505	1.00
562_T	566_V	0.505	1.00
327_M	330_D	0.504	1.00
520_P	590_F	0.503	1.00
498_S	518_P	0.503	1.00
565_R	568_F	0.503	1.00
425_V	428_D	0.502	1.00
418_V	422_G	0.501	1.00
417_V	433_G	0.500	1.00
360_R	403_Q	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2vsqA	1	0.935	100	0.12	Contact Map
3tsyA	2	0.7117	100	0.166	Contact Map
1mdbA	1	0.8767	100	0.186	Contact Map
1pg4A	1	0.9667	100	0.19	Contact Map
3etcA	2	0.8617	100	0.192	Contact Map
1amuA	1	0.8367	100	0.193	Contact Map
3g7sA	2	0.8	100	0.194	Contact Map
3ni2A	1	0.865	100	0.196	Contact Map
1ry2A	1	0.9217	100	0.197	Contact Map
2d1sA	1	0.87	100	0.198	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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