Q9HSK2 - HALSA - GREMLIN Contacts

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Q9HSK2 - Uncharacterized protein

UniProt:	Q9HSK2	Sequences: MPPTQLKDPVHGYIELDAALVDGLIDRKPFQRLRHVRQLSATTLVYPGANHTRFEHSLGVYHLAKTVFENLRTQPYFHQDATTTELDAIQRTLECAALLHDVGHPPFSHLGERYLDRSAILDRLADHGLHATFADAGVGNAPLREASPHELFGCLFVCREFADAITAMDVDPHAVCAHILGYSLAYERGGRWQHGVAAQILHSPIDVDRLDYITRDNQMTGADVLSFDTARMVASYTAHPDEGLALSDKALSTIGNYLEGRIALYMWVTQHHKSVFAHALLRELLAALAAMRDTPPITIDAVLDRGIDDNTILERLRVAARDNPDSTLATLYERFRSREFPETCWKHRVAYAARVDVGDTTASASAPADDPPRATDADIDAFSDWLTGNADRLEPRLADALGVPVHEVWIEHSYVPEYEPQALEDIPIAYGGTTRSVGDWGLYGDRAFDSPIPFVFVPHGVETQAITTLSAWFHAESTA	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	479 (384)
Sequences:	767 (559)
Seq/√Len:	28.5

BACSU - YWFO YDHJ
HALSA - Q9HSK2 Q9HPP4 Q9HMK5
SULSO - Q97XC0 Q97U95 Q7LXZ1

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
120_I	150_E	3.851	1.00
27_R	164_A	3.577	1.00
287_A	327_T	3.501	1.00
31_Q	34_R	3.319	1.00
213_I	264_L	3.156	1.00
334_R	339_E	3.154	1.00
63_L	207_V	3.130	1.00
24_L	95_C	3.090	1.00
99_L	102_V	3.076	1.00
317_R	336_R	2.964	1.00
69_E	90_Q	2.841	1.00
67_V	207_V	2.800	1.00
160_E	164_A	2.795	1.00
10_V	218_Q	2.764	1.00
264_L	269_T	2.680	1.00
99_L	157_V	2.652	1.00
64_A	93_L	2.592	0.99
105_P	111_G	2.590	0.99
65_K	94_E	2.589	0.99
419_E	427_P	2.561	0.99
43_T	52_T	2.513	0.99
9_P	48_G	2.394	0.99
231_R	271_H	2.390	0.99
34_R	54_F	2.368	0.99
20_L	94_E	2.364	0.99
403_V	406_H	2.359	0.99
392_R	396_R	2.326	0.99
42_T	274_S	2.310	0.99
104_H	150_E	2.167	0.98
100_H	208_D	2.156	0.98
27_R	30_F	2.151	0.98
374_A	377_A	2.123	0.98
158_C	176_C	2.112	0.98
119_A	149_H	2.105	0.97
311_T	317_R	2.056	0.97
395_P	399_D	2.013	0.97
250_A	253_T	2.011	0.97
171_D	174_A	1.990	0.96
109_H	208_D	1.956	0.96
5_Q	13_Y	1.885	0.95
9_P	218_Q	1.880	0.95
415_V	423_L	1.877	0.95
399_D	402_G	1.872	0.95
102_V	157_V	1.844	0.95
101_D	208_D	1.835	0.94
154_C	157_V	1.827	0.94
28_K	160_E	1.827	0.94
150_E	153_G	1.799	0.94
61_Y	94_E	1.791	0.94
162_A	166_T	1.769	0.93
330_T	334_R	1.713	0.92
69_E	87_D	1.707	0.92
153_G	157_V	1.680	0.91
10_V	222_A	1.673	0.91
35_H	308_D	1.672	0.91
54_F	231_R	1.629	0.90
151_L	180_L	1.624	0.90
206_D	209_R	1.615	0.89
239_H	245_A	1.606	0.89
306_G	322_D	1.604	0.89
60_V	207_V	1.586	0.89
110_L	274_S	1.552	0.87
424_E	428_I	1.546	0.87
173_H	333_E	1.530	0.87
109_H	150_E	1.524	0.86
171_D	179_I	1.516	0.86
116_D	298_T	1.509	0.86
100_H	149_H	1.504	0.86
264_L	268_V	1.501	0.86
38_Q	51_H	1.493	0.85
205_I	227_F	1.491	0.85
311_T	316_L	1.483	0.85
421_Q	424_E	1.463	0.84
60_V	97_A	1.460	0.84
93_L	197_A	1.453	0.84
324_P	329_A	1.451	0.84
44_L	277_A	1.445	0.83
4_T	21_V	1.434	0.83
6_L	47_P	1.434	0.83
150_E	208_D	1.431	0.83
105_P	269_T	1.421	0.82
104_H	149_H	1.417	0.82
402_G	405_V	1.410	0.82
151_L	155_L	1.408	0.82
45_V	93_L	1.408	0.82
161_F	306_G	1.407	0.82
58_L	414_Y	1.405	0.82
201_L	340_F	1.402	0.81
7_K	13_Y	1.399	0.81
320_A	325_D	1.397	0.81
64_A	207_V	1.393	0.81
160_E	165_I	1.387	0.81
393_L	396_R	1.379	0.80
284_L	335_F	1.375	0.80
152_F	304_D	1.371	0.80
154_C	180_L	1.362	0.79
284_L	332_Y	1.359	0.79
291_M	324_P	1.355	0.79
351_Y	358_G	1.345	0.79
6_L	16_L	1.341	0.78
12_G	230_A	1.333	0.78
40_S	108_S	1.330	0.78
205_I	257_Y	1.322	0.77
260_G	264_L	1.322	0.77
149_H	208_D	1.320	0.77
153_G	156_F	1.320	0.77
23_G	167_A	1.319	0.77
109_H	149_H	1.316	0.77
11_H	210_L	1.307	0.77
53_R	56_H	1.305	0.76
214_T	229_T	1.295	0.76
64_A	97_A	1.292	0.76
100_H	104_H	1.283	0.75
176_C	179_I	1.281	0.75
155_L	159_R	1.274	0.75
276_F	414_Y	1.264	0.74
322_D	329_A	1.258	0.74
29_P	159_R	1.256	0.74
159_R	163_D	1.253	0.73
276_F	280_L	1.253	0.73
104_H	208_D	1.248	0.73
40_S	278_H	1.231	0.72
246_L	254_I	1.225	0.72
50_N	235_S	1.219	0.71
104_H	109_H	1.216	0.71
31_Q	54_F	1.216	0.71
101_D	109_H	1.214	0.71
58_L	175_V	1.213	0.71
11_H	271_H	1.211	0.71
112_E	255_G	1.205	0.70
355_V	358_G	1.203	0.70
227_F	258_L	1.200	0.70
20_L	95_C	1.185	0.69
16_L	57_S	1.185	0.69
30_F	98_L	1.175	0.68
28_K	337_S	1.167	0.68
29_P	163_D	1.166	0.68
31_Q	51_H	1.160	0.67
36_V	227_F	1.159	0.67
396_R	399_D	1.152	0.67
236_Y	246_L	1.149	0.67
213_I	260_G	1.147	0.67
262_I	266_M	1.146	0.66
75_P	79_Q	1.145	0.66
70_N	233_V	1.137	0.66
8_D	11_H	1.133	0.66
47_P	50_N	1.132	0.66
56_H	101_D	1.131	0.65
231_R	338_R	1.128	0.65
46_Y	219_M	1.123	0.65
20_L	61_Y	1.123	0.65
101_D	149_H	1.117	0.64
53_R	59_G	1.116	0.64
390_A	395_P	1.115	0.64
45_V	54_F	1.114	0.64
26_D	271_H	1.113	0.64
66_T	230_A	1.111	0.64
181_G	309_D	1.111	0.64
25_I	30_F	1.098	0.63
106_P	413_S	1.097	0.63
248_D	377_A	1.093	0.63
421_Q	425_D	1.091	0.63
15_E	234_A	1.090	0.63
420_P	424_E	1.087	0.62
51_H	216_D	1.085	0.62
108_S	212_Y	1.079	0.62
401_L	404_P	1.075	0.61
316_L	328_L	1.072	0.61
156_F	159_R	1.068	0.61
287_A	325_D	1.067	0.61
100_H	150_E	1.066	0.61
413_S	423_L	1.065	0.61
104_H	212_Y	1.065	0.61
325_D	328_L	1.058	0.60
311_T	315_R	1.055	0.60
392_R	395_P	1.052	0.60
39_L	220_T	1.052	0.60
392_R	399_D	1.046	0.59
20_L	57_S	1.046	0.59
206_D	212_Y	1.045	0.59
213_I	268_V	1.044	0.59
100_H	109_H	1.036	0.59
40_S	206_D	1.036	0.59
227_F	265_Y	1.031	0.58
338_R	342_E	1.030	0.58
56_H	100_H	1.029	0.58
173_H	177_A	1.025	0.58
19_A	23_G	1.023	0.58
395_P	405_V	1.014	0.57
216_D	269_T	1.012	0.57
47_P	55_E	1.007	0.56
62_H	65_K	1.006	0.56
289_A	295_P	1.001	0.56
312_I	316_L	1.000	0.56
105_P	304_D	0.998	0.56
69_E	74_Q	0.997	0.56
67_V	236_Y	0.991	0.55
420_P	427_P	0.990	0.55
33_L	38_Q	0.987	0.55
149_H	153_G	0.985	0.55
40_S	212_Y	0.983	0.54
379_I	382_F	0.981	0.54
68_F	90_Q	0.978	0.54
109_H	261_R	0.978	0.54
327_T	330_T	0.978	0.54
7_K	46_Y	0.976	0.54
381_A	384_D	0.974	0.54
422_A	426_I	0.972	0.54
285_L	334_R	0.968	0.53
80_D	84_T	0.962	0.53
314_E	317_R	0.960	0.53
273_K	342_E	0.959	0.53
9_P	219_M	0.959	0.53
56_H	208_D	0.958	0.53
25_I	54_F	0.954	0.52
94_E	97_A	0.951	0.52
109_H	212_Y	0.949	0.52
389_N	414_Y	0.949	0.52
64_A	200_I	0.949	0.52
31_Q	107_F	0.948	0.52
321_R	336_R	0.948	0.52
58_L	254_I	0.946	0.52
60_V	205_I	0.945	0.52
29_P	40_S	0.939	0.51
48_G	219_M	0.937	0.51
63_L	387_T	0.937	0.51
417_E	420_P	0.936	0.51
399_D	405_V	0.935	0.51
220_T	268_V	0.935	0.51
46_Y	277_A	0.930	0.50
357_V	360_T	0.927	0.50
420_P	423_L	0.925	0.50
56_H	59_G	0.925	0.50
271_H	342_E	0.921	0.50
207_V	232_M	0.921	0.50
91_R	171_D	0.917	0.49
423_L	427_P	0.914	0.49
403_V	408_V	0.911	0.49
354_R	361_T	0.911	0.49
367_P	375_T	0.911	0.49
80_D	83_T	0.908	0.49
243_G	390_A	0.908	0.49
204_P	369_D	0.906	0.49
110_L	278_H	0.904	0.48
271_H	338_R	0.902	0.48
52_T	102_V	0.902	0.48
177_A	198_A	0.901	0.48
62_H	66_T	0.901	0.48
224_V	264_L	0.901	0.48
54_F	271_H	0.900	0.48
277_A	340_F	0.898	0.48
104_H	216_D	0.896	0.48
149_H	212_Y	0.896	0.48
82_T	85_E	0.896	0.48
79_Q	83_T	0.894	0.48
98_L	103_G	0.892	0.47
52_T	97_A	0.889	0.47
107_F	221_G	0.885	0.47
419_E	422_A	0.884	0.47
17_D	94_E	0.883	0.47
174_A	312_I	0.882	0.47
399_D	404_P	0.881	0.47
16_L	30_F	0.877	0.46
59_G	215_R	0.873	0.46
53_R	211_D	0.872	0.46
170_V	296_P	0.868	0.46
368_A	371_P	0.867	0.46
266_M	308_D	0.865	0.45
28_K	302_V	0.864	0.45
45_V	274_S	0.859	0.45
221_G	228_D	0.857	0.45
11_H	227_F	0.856	0.45
297_I	307_I	0.852	0.44
26_D	34_R	0.850	0.44
16_L	58_L	0.848	0.44
280_L	328_L	0.847	0.44
211_D	215_R	0.844	0.44
69_E	86_L	0.840	0.43
112_E	259_E	0.840	0.43
394_E	399_D	0.840	0.43
115_L	281_L	0.840	0.43
61_Y	272_H	0.839	0.43
69_E	205_I	0.839	0.43
179_I	206_D	0.839	0.43
103_G	216_D	0.834	0.43
26_D	338_R	0.831	0.43
175_V	181_G	0.831	0.43
209_R	258_L	0.831	0.43
421_Q	427_P	0.829	0.43
388_G	391_D	0.827	0.42
120_I	123_R	0.826	0.42
102_V	370_D	0.823	0.42
69_E	73_T	0.821	0.42
17_D	20_L	0.820	0.42
328_L	331_L	0.818	0.42
24_L	99_L	0.817	0.42
293_D	302_V	0.815	0.42
25_I	34_R	0.814	0.42
197_A	201_L	0.811	0.41
235_S	250_A	0.811	0.41
33_L	309_D	0.809	0.41
108_S	308_D	0.807	0.41
123_R	153_G	0.804	0.41
101_D	212_Y	0.803	0.41
284_L	340_F	0.800	0.40
70_N	74_Q	0.799	0.40
38_Q	208_D	0.798	0.40
32_R	59_G	0.796	0.40
390_A	393_L	0.796	0.40
8_D	33_L	0.793	0.40
103_G	108_S	0.792	0.40
61_Y	65_K	0.791	0.40
79_Q	84_T	0.791	0.40
196_V	209_R	0.784	0.39
280_L	335_F	0.783	0.39
33_L	57_S	0.782	0.39
50_N	55_E	0.780	0.39
6_L	25_I	0.779	0.39
112_E	165_I	0.778	0.39
47_P	97_A	0.777	0.39
245_A	332_Y	0.777	0.39
265_Y	304_D	0.776	0.39
222_A	225_L	0.776	0.39
280_L	284_L	0.775	0.39
8_D	32_R	0.773	0.38
180_L	191_R	0.773	0.38
40_S	106_P	0.771	0.38
284_L	343_T	0.768	0.38
201_L	382_F	0.768	0.38
5_Q	15_E	0.766	0.38
273_K	312_I	0.764	0.38
418_Y	427_P	0.763	0.38
208_D	212_Y	0.762	0.38
58_L	63_L	0.761	0.38
53_R	109_H	0.759	0.37
111_G	269_T	0.757	0.37
358_G	361_T	0.753	0.37
369_D	373_R	0.753	0.37
118_S	413_S	0.753	0.37
63_L	174_A	0.752	0.37
38_Q	216_D	0.752	0.37
312_I	342_E	0.752	0.37
395_P	404_P	0.751	0.37
256_N	263_A	0.749	0.37
280_L	340_F	0.749	0.37
97_A	283_E	0.747	0.37
4_T	274_S	0.745	0.36
154_C	159_R	0.744	0.36
196_V	199_Q	0.743	0.36
287_A	328_L	0.741	0.36
220_T	264_L	0.741	0.36
34_R	51_H	0.739	0.36
51_H	268_V	0.738	0.36
46_Y	419_E	0.736	0.36
119_A	286_A	0.735	0.36
16_L	25_I	0.733	0.36
211_D	216_D	0.732	0.36
79_Q	82_T	0.731	0.35
161_F	164_A	0.729	0.35
231_R	250_A	0.728	0.35
223_D	230_A	0.727	0.35
6_L	281_L	0.725	0.35
120_I	149_H	0.725	0.35
38_Q	56_H	0.725	0.35
167_A	387_T	0.723	0.35
12_G	226_S	0.723	0.35
32_R	56_H	0.722	0.35
13_Y	235_S	0.722	0.35
102_V	156_F	0.722	0.35
112_E	272_H	0.719	0.35
333_E	337_S	0.717	0.34
196_V	284_L	0.716	0.34
26_D	31_Q	0.714	0.34
210_L	250_A	0.714	0.34
212_Y	216_D	0.713	0.34
225_L	255_G	0.712	0.34
331_L	373_R	0.707	0.34
38_Q	101_D	0.707	0.34
216_D	271_H	0.707	0.34
21_V	46_Y	0.706	0.34
7_K	41_A	0.705	0.34
400_A	405_V	0.705	0.34
257_Y	272_H	0.703	0.33
218_Q	233_V	0.703	0.33
242_E	398_A	0.703	0.33
280_L	341_P	0.700	0.33
29_P	201_L	0.700	0.33
33_L	37_R	0.700	0.33
296_P	322_D	0.699	0.33
87_D	194_H	0.699	0.33
152_F	155_L	0.697	0.33
386_L	391_D	0.695	0.33
112_E	116_D	0.694	0.33
55_E	219_M	0.694	0.33
205_I	246_L	0.694	0.33
399_D	414_Y	0.693	0.33
393_L	397_L	0.691	0.33
45_V	271_H	0.690	0.33
405_V	408_V	0.689	0.33
53_R	101_D	0.688	0.32
14_I	75_P	0.688	0.32
53_R	215_R	0.686	0.32
300_D	303_L	0.684	0.32
41_A	281_L	0.684	0.32
56_H	211_D	0.683	0.32
339_E	360_T	0.682	0.32
38_Q	104_H	0.682	0.32
105_P	207_V	0.681	0.32
419_E	425_D	0.677	0.32
375_T	381_A	0.677	0.32
313_L	317_R	0.677	0.32
51_H	271_H	0.676	0.32
10_V	245_A	0.674	0.32
57_S	94_E	0.669	0.31
93_L	200_I	0.668	0.31
38_Q	212_Y	0.665	0.31
355_V	359_D	0.661	0.31
279_A	285_L	0.661	0.31
30_F	237_T	0.660	0.31
199_Q	375_T	0.660	0.31
346_K	412_H	0.658	0.30
29_P	164_A	0.656	0.30
6_L	10_V	0.653	0.30
90_Q	171_D	0.653	0.30
28_K	164_A	0.652	0.30
6_L	95_C	0.651	0.30
100_H	212_Y	0.649	0.30
17_D	26_D	0.648	0.30
46_Y	260_G	0.647	0.30
108_S	216_D	0.646	0.30
57_S	221_G	0.645	0.30
29_P	382_F	0.643	0.29
28_K	322_D	0.643	0.29
106_P	314_E	0.641	0.29
76_Y	79_Q	0.639	0.29
369_D	379_I	0.639	0.29
294_T	352_A	0.639	0.29
398_A	401_L	0.636	0.29
5_Q	234_A	0.635	0.29
38_Q	46_Y	0.634	0.29
96_A	103_G	0.633	0.29
6_L	21_V	0.631	0.29
112_E	152_F	0.630	0.29
293_D	296_P	0.629	0.29
150_E	212_Y	0.628	0.29
11_H	414_Y	0.627	0.28
28_K	313_L	0.625	0.28
101_D	150_E	0.624	0.28
231_R	235_S	0.622	0.28
253_T	331_L	0.620	0.28
262_I	267_W	0.617	0.28
367_P	371_P	0.616	0.28
422_A	425_D	0.615	0.28
333_E	352_A	0.615	0.28
298_T	313_L	0.615	0.28
52_T	379_I	0.615	0.28
333_E	339_E	0.613	0.28
259_E	263_A	0.612	0.28
36_V	43_T	0.610	0.27
32_R	53_R	0.609	0.27
419_E	428_I	0.609	0.27
334_R	341_P	0.608	0.27
24_L	165_I	0.607	0.27
39_L	42_T	0.607	0.27
41_A	278_H	0.606	0.27
161_F	359_D	0.601	0.27
255_G	259_E	0.601	0.27
321_R	337_S	0.600	0.27
335_F	338_R	0.599	0.27
6_L	414_Y	0.598	0.27
302_V	324_P	0.597	0.27
66_T	69_E	0.593	0.26
79_Q	85_E	0.591	0.26
7_K	14_I	0.590	0.26
72_R	87_D	0.588	0.26
68_F	107_F	0.587	0.26
331_L	361_T	0.587	0.26
166_T	169_D	0.587	0.26
369_D	381_A	0.587	0.26
7_K	274_S	0.586	0.26
222_A	268_V	0.586	0.26
39_L	205_I	0.585	0.26
284_L	331_L	0.583	0.26
108_S	278_H	0.583	0.26
268_V	305_R	0.583	0.26
379_I	385_W	0.582	0.26
213_I	217_N	0.581	0.26
16_L	19_A	0.581	0.26
44_L	233_V	0.580	0.26
7_K	217_N	0.580	0.26
104_H	108_S	0.580	0.26
38_Q	100_H	0.578	0.25
29_P	237_T	0.576	0.25
91_R	268_V	0.575	0.25
351_Y	359_D	0.573	0.25
228_D	250_A	0.572	0.25
57_S	335_F	0.570	0.25
37_R	177_A	0.567	0.25
56_H	109_H	0.564	0.25
160_E	163_D	0.564	0.25
422_A	427_P	0.563	0.25
38_Q	103_G	0.563	0.25
82_T	358_G	0.562	0.25
382_F	388_G	0.556	0.24
167_A	331_L	0.556	0.24
46_Y	410_I	0.554	0.24
174_A	192_W	0.553	0.24
400_A	403_V	0.553	0.24
236_Y	313_L	0.553	0.24
23_G	180_L	0.553	0.24
330_T	418_Y	0.552	0.24
99_L	209_R	0.552	0.24
58_L	358_G	0.551	0.24
8_D	14_I	0.551	0.24
26_D	51_H	0.550	0.24
12_G	277_A	0.548	0.24
35_H	202_H	0.548	0.24
102_V	116_D	0.547	0.24
247_S	309_D	0.545	0.24
66_T	113_R	0.545	0.24
421_Q	428_I	0.544	0.24
255_G	368_A	0.542	0.23
38_Q	268_V	0.542	0.23
209_R	212_Y	0.541	0.23
161_F	354_R	0.540	0.23
49_A	280_L	0.537	0.23
68_F	285_L	0.536	0.23
57_S	209_R	0.535	0.23
28_K	102_V	0.535	0.23
397_L	404_P	0.534	0.23
252_S	266_M	0.533	0.23
161_F	165_I	0.532	0.23
90_Q	95_C	0.531	0.23
423_L	426_I	0.531	0.23
59_G	211_D	0.529	0.23
322_D	326_S	0.529	0.23
108_S	209_R	0.529	0.23
325_D	331_L	0.529	0.23
55_E	232_M	0.527	0.23
227_F	267_W	0.527	0.23
117_R	286_A	0.526	0.23
399_D	403_V	0.523	0.22
158_C	332_Y	0.523	0.22
68_F	72_R	0.523	0.22
53_R	100_H	0.523	0.22
259_E	401_L	0.522	0.22
17_D	207_V	0.521	0.22
201_L	259_E	0.521	0.22
252_S	262_I	0.521	0.22
389_N	396_R	0.520	0.22
81_A	84_T	0.517	0.22
53_R	208_D	0.517	0.22
313_L	344_C	0.517	0.22
29_P	94_E	0.517	0.22
11_H	214_T	0.516	0.22
26_D	200_I	0.515	0.22
284_L	328_L	0.514	0.22
201_L	330_T	0.513	0.22
210_L	217_N	0.512	0.22
178_H	218_Q	0.511	0.22
210_L	275_V	0.510	0.22
326_S	398_A	0.510	0.22
10_V	322_D	0.510	0.22
56_H	215_R	0.509	0.22
263_A	267_W	0.509	0.22
265_Y	270_Q	0.508	0.22
267_W	308_D	0.508	0.22
109_H	211_D	0.508	0.22
26_D	375_T	0.507	0.22
388_G	392_R	0.506	0.21
412_H	415_V	0.506	0.21
34_R	38_Q	0.505	0.21
313_L	335_F	0.505	0.21
375_T	403_V	0.503	0.21
247_S	343_T	0.500	0.21
203_S	210_L	0.500	0.21

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4mz7A	4	0.8956	100	0.277	Contact Map
4lrlA	4	0.8246	100	0.377	Contact Map
2q14A	4	0.762	100	0.418	Contact Map
2hekA	4	0.7537	100	0.42	Contact Map
2pgsA	4	0.618	100	0.761	Contact Map
3bg2A	4	0.6221	100	0.763	Contact Map
2dqbA	4	0.595	100	0.773	Contact Map
4x9eA	4	0.6868	100	0.779	Contact Map
3gw7A	2	0.4175	98.4	0.925	Contact Map
2pq7A	2	0.3549	98.3	0.928	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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