Q9HSE9 - HALSA - GREMLIN Contacts

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Q9HSE9 - Cell division protein

UniProt:	Q9HSE9	Sequences: MKAALIGVGQAGGKVTEALLAEDQRAEYGAVRGTLAVNTAKTDLEGLDIDTMLIGQERVKGHGVGADNELGAEVMTNDVREVMGGLDGVVDPHTEAIFVIAGLGGGTGSGGAPVLVKELQRVYEIPVYALGILPGRDEGGIYQANAGRSLKTLVREADSTLLVDNDAWRSTGDSVTEAFDEINSRIARRVGILLAAGENIEGVGESVVDSSEVINTLQSGEMSAIGFASAEAAADAGENINTITSTARKALLSGMSVPQTTEAGAALVVAAGESERVSRKGVEKARTWVEDETRSMQVRGGDFPLDSDKIAVLVLLAGISRSQRLQEFMDRAKEASKEVEAEQETENFQADELDDLI	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	357 (302)
Sequences:	3490 (1589)
Seq/√Len:	91.4

ECOLI - FTSZ
BACSU - FTSZ
HALSA - Q9HSE9 FTSZ1 FTSZ2 Q9HHS0 Q9HNV2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
37_V	54_I	5.059	1.00
72_A	152_T	4.350	1.00
136_R	166_D	4.039	1.00
229_S	309_K	4.015	1.00
109_S	149_S	3.978	1.00
79_V	117_K	3.589	1.00
79_V	118_E	3.585	1.00
152_T	155_R	3.182	1.00
8_V	111_G	3.141	1.00
129_A	157_A	3.128	1.00
78_D	81_E	2.989	1.00
84_G	87_D	2.921	1.00
157_A	160_T	2.880	1.00
117_K	156_E	2.818	1.00
242_T	281_G	2.794	1.00
21_A	48_D	2.667	1.00
231_E	309_K	2.657	1.00
268_V	286_R	2.632	1.00
234_A	245_S	2.626	1.00
99_V	112_A	2.469	1.00
274_S	306_D	2.440	1.00
133_L	143_Q	2.414	1.00
13_G	43_D	2.390	1.00
181_E	184_S	2.387	1.00
117_K	121_R	2.342	1.00
272_G	277_V	2.262	1.00
140_G	144_A	2.231	1.00
184_S	187_A	2.163	1.00
217_L	317_A	2.107	1.00
41_K	45_E	2.106	1.00
72_A	76_T	2.060	1.00
214_I	218_Q	2.054	1.00
4_A	94_T	2.052	1.00
103_L	150_L	2.038	1.00
83_M	122_V	1.995	1.00
129_A	160_T	1.962	1.00
133_L	147_G	1.933	1.00
83_M	121_R	1.930	1.00
73_E	76_T	1.913	1.00
94_T	97_I	1.859	1.00
229_S	311_A	1.832	1.00
79_V	83_M	1.830	1.00
151_K	155_R	1.821	1.00
6_I	86_L	1.812	1.00
69_E	73_E	1.808	1.00
247_A	289_V	1.784	1.00
37_V	115_L	1.782	1.00
86_L	122_V	1.775	1.00
35_L	49_I	1.741	1.00
144_A	148_R	1.738	1.00
287_T	291_D	1.688	1.00
83_M	118_E	1.647	1.00
244_T	248_R	1.630	1.00
17_E	47_L	1.622	1.00
35_L	50_D	1.622	1.00
18_A	183_N	1.613	1.00
245_S	248_R	1.613	1.00
159_S	217_L	1.598	1.00
16_T	36_A	1.590	1.00
10_Q	14_K	1.587	1.00
80_R	83_M	1.584	1.00
204_G	303_F	1.561	1.00
17_E	48_D	1.560	1.00
282_V	300_G	1.555	1.00
76_T	117_K	1.549	1.00
230_A	245_S	1.547	1.00
187_A	191_G	1.537	1.00
52_M	85_G	1.529	1.00
9_G	12_G	1.521	1.00
275_E	308_D	1.476	1.00
20_L	49_I	1.471	1.00
148_R	152_T	1.455	1.00
118_E	122_V	1.431	0.99
216_T	265_A	1.429	0.99
248_R	252_L	1.425	0.99
196_A	208_V	1.422	0.99
251_L	314_V	1.421	0.99
36_A	44_L	1.402	0.99
81_E	84_G	1.400	0.99
244_T	284_K	1.399	0.99
88_G	94_T	1.396	0.99
189_R	225_I	1.380	0.99
205_E	302_D	1.357	0.99
4_A	33_G	1.355	0.99
8_V	115_L	1.348	0.99
173_D	178_A	1.340	0.99
243_I	247_A	1.333	0.99
141_I	145_N	1.322	0.99
206_S	300_G	1.321	0.99
129_A	153_L	1.318	0.99
101_A	131_G	1.313	0.99
75_M	111_G	1.296	0.99
86_L	97_I	1.293	0.99
266_A	293_T	1.292	0.99
275_E	307_S	1.287	0.99
60_K	95_E	1.279	0.99
133_L	257_V	1.248	0.98
283_E	287_T	1.243	0.98
83_M	87_D	1.240	0.98
176_T	304_P	1.238	0.98
37_V	82_V	1.224	0.98
323_Q	326_Q	1.198	0.98
36_A	47_L	1.194	0.98
66_A	299_R	1.193	0.98
167_A	170_S	1.186	0.98
97_I	124_E	1.185	0.98
141_I	297_Q	1.183	0.98
174_S	177_E	1.181	0.98
321_R	324_R	1.180	0.98
264_G	294_R	1.178	0.98
64_V	70_L	1.177	0.98
285_A	310_I	1.177	0.98
221_E	229_S	1.172	0.98
269_V	303_F	1.171	0.98
130_L	190_V	1.169	0.98
265_A	296_M	1.142	0.97
277_V	310_I	1.133	0.97
261_T	292_E	1.129	0.97
172_G	280_K	1.124	0.97
166_D	169_R	1.080	0.96
67_D	215_N	1.077	0.96
277_V	282_V	1.069	0.96
169_R	283_E	1.062	0.96
271_A	303_F	1.059	0.96
106_G	110_G	1.056	0.96
69_E	72_A	1.056	0.96
176_T	274_S	1.055	0.96
22_E	187_A	1.050	0.96
177_E	180_D	1.030	0.95
35_L	85_G	1.028	0.95
147_G	151_K	1.028	0.95
13_G	36_A	1.027	0.95
305_L	311_A	1.027	0.95
63_G	106_G	1.021	0.95
172_G	278_S	1.021	0.95
33_G	50_D	1.020	0.95
159_S	220_G	1.017	0.95
220_G	227_F	1.002	0.94
265_A	294_R	0.997	0.94
173_D	280_K	0.993	0.94
204_G	269_V	0.991	0.94
145_N	148_R	0.981	0.94
66_A	215_N	0.977	0.93
82_V	118_E	0.972	0.93
293_T	296_M	0.970	0.93
99_V	116_V	0.968	0.93
97_I	115_L	0.964	0.93
231_E	308_D	0.963	0.93
46_G	287_T	0.961	0.93
20_L	34_T	0.959	0.93
56_Q	81_E	0.958	0.93
65_G	106_G	0.947	0.92
24_Q	187_A	0.944	0.92
133_L	164_D	0.943	0.92
180_D	183_N	0.938	0.92
40_A	43_D	0.936	0.92
282_V	286_R	0.935	0.92
242_T	278_S	0.935	0.92
221_E	232_A	0.934	0.92
233_A	242_T	0.932	0.92
221_E	230_A	0.927	0.91
18_A	189_R	0.924	0.91
17_E	46_G	0.920	0.91
19_L	34_T	0.914	0.91
18_A	22_E	0.914	0.91
75_M	82_V	0.910	0.91
20_L	23_D	0.909	0.91
246_T	312_V	0.908	0.91
53_L	56_Q	0.905	0.90
152_T	156_E	0.902	0.90
18_A	21_A	0.901	0.90
288_W	291_D	0.900	0.90
245_S	249_K	0.899	0.90
103_L	131_G	0.898	0.90
50_D	85_G	0.892	0.90
54_I	111_G	0.892	0.90
216_T	299_R	0.888	0.90
286_R	300_G	0.882	0.89
67_D	73_E	0.881	0.89
114_V	118_E	0.879	0.89
15_V	19_L	0.879	0.89
175_V	302_D	0.878	0.89
118_E	121_R	0.874	0.89
244_T	288_W	0.870	0.89
148_R	151_K	0.869	0.89
11_A	15_V	0.869	0.89
287_T	290_E	0.864	0.88
322_S	326_Q	0.863	0.88
151_K	154_V	0.860	0.88
20_L	24_Q	0.860	0.88
86_L	94_T	0.856	0.88
95_E	169_R	0.854	0.88
94_T	124_E	0.854	0.88
143_Q	147_G	0.852	0.88
96_A	217_L	0.840	0.87
191_G	195_A	0.840	0.87
224_A	258_P	0.837	0.87
33_G	94_T	0.830	0.86
61_G	65_G	0.825	0.86
25_R	202_G	0.813	0.85
19_L	23_D	0.810	0.85
167_A	253_S	0.806	0.85
36_A	49_I	0.806	0.85
168_W	182_I	0.804	0.84
322_S	325_L	0.804	0.84
228_A	246_T	0.798	0.84
259_Q	266_A	0.795	0.84
4_A	35_L	0.793	0.84
21_A	180_D	0.789	0.83
321_R	326_Q	0.789	0.83
168_W	279_R	0.788	0.83
38_N	43_D	0.788	0.83
136_R	287_T	0.786	0.83
321_R	325_L	0.784	0.83
266_A	316_L	0.778	0.82
101_A	112_A	0.778	0.82
6_I	37_V	0.773	0.82
141_I	144_A	0.769	0.82
96_A	127_V	0.763	0.81
6_I	97_I	0.761	0.81
6_I	124_E	0.759	0.81
11_A	20_L	0.758	0.81
99_V	115_L	0.758	0.81
58_R	73_E	0.756	0.81
11_A	319_I	0.755	0.81
288_W	292_E	0.755	0.81
52_M	82_V	0.754	0.80
22_E	180_D	0.749	0.80
243_I	310_I	0.749	0.80
15_V	34_T	0.747	0.80
56_Q	78_D	0.744	0.80
144_A	147_G	0.744	0.80
47_L	51_T	0.744	0.80
58_R	70_L	0.740	0.79
173_D	177_E	0.737	0.79
103_L	149_S	0.736	0.79
265_A	297_Q	0.734	0.79
272_G	280_K	0.729	0.78
112_A	116_V	0.725	0.78
175_V	179_F	0.724	0.78
71_G	106_G	0.720	0.77
120_Q	158_D	0.719	0.77
9_G	15_V	0.717	0.77
138_E	179_F	0.715	0.77
221_E	228_A	0.714	0.77
184_S	188_R	0.714	0.77
280_K	286_R	0.712	0.77
76_T	79_V	0.711	0.76
272_G	282_V	0.709	0.76
18_A	37_V	0.708	0.76
36_A	51_T	0.707	0.76
15_V	186_I	0.706	0.76
66_A	145_N	0.703	0.76
285_A	312_V	0.703	0.76
24_Q	27_E	0.702	0.76
10_Q	40_A	0.701	0.75
219_S	222_M	0.698	0.75
7_G	12_G	0.695	0.75
264_G	320_S	0.694	0.75
215_N	299_R	0.694	0.75
222_M	268_V	0.693	0.75
310_I	323_Q	0.690	0.74
164_D	185_R	0.688	0.74
282_V	292_E	0.687	0.74
174_S	278_S	0.687	0.74
208_V	213_V	0.685	0.74
75_M	114_V	0.684	0.74
205_E	304_P	0.683	0.74
111_G	115_L	0.682	0.73
6_I	115_L	0.680	0.73
222_M	320_S	0.679	0.73
268_V	282_V	0.678	0.73
315_L	319_I	0.678	0.73
21_A	24_Q	0.677	0.73
98_F	223_S	0.677	0.73
183_N	286_R	0.675	0.73
98_F	127_V	0.674	0.73
192_I	313_L	0.673	0.72
265_A	318_G	0.673	0.72
190_V	193_L	0.672	0.72
277_V	300_G	0.670	0.72
200_I	213_V	0.668	0.72
220_G	265_A	0.667	0.72
171_T	280_K	0.663	0.71
208_V	299_R	0.662	0.71
145_N	297_Q	0.662	0.71
264_G	318_G	0.659	0.71
248_R	288_W	0.658	0.71
38_N	65_G	0.656	0.71
11_A	19_L	0.654	0.70
169_R	280_K	0.651	0.70
201_E	204_G	0.650	0.70
132_I	135_G	0.645	0.69
70_L	73_E	0.644	0.69
37_V	85_G	0.642	0.69
64_V	106_G	0.642	0.69
133_L	315_L	0.641	0.69
78_D	83_M	0.638	0.68
150_L	162_L	0.636	0.68
164_D	258_P	0.636	0.68
250_A	255_M	0.631	0.68
205_E	282_V	0.631	0.68
105_G	165_N	0.630	0.67
16_T	19_L	0.630	0.67
11_A	132_I	0.630	0.67
176_T	205_E	0.627	0.67
139_G	298_V	0.626	0.67
99_V	129_A	0.624	0.67
204_G	207_V	0.623	0.67
9_G	16_T	0.621	0.66
247_A	270_A	0.621	0.66
253_S	319_I	0.620	0.66
143_Q	166_D	0.619	0.66
59_V	65_G	0.618	0.66
202_G	303_F	0.617	0.66
219_S	230_A	0.616	0.66
63_G	108_G	0.613	0.65
270_A	285_A	0.613	0.65
277_V	284_K	0.611	0.65
65_G	68_N	0.607	0.65
141_I	295_S	0.605	0.64
246_T	250_A	0.604	0.64
211_S	214_I	0.601	0.64
219_S	229_S	0.601	0.64
114_V	117_K	0.601	0.64
278_S	304_P	0.599	0.64
85_G	94_T	0.596	0.63
271_A	278_S	0.596	0.63
145_N	222_M	0.595	0.63
208_V	212_E	0.592	0.63
43_D	66_A	0.592	0.63
79_V	115_L	0.591	0.63
38_N	42_T	0.591	0.63
280_K	284_K	0.589	0.62
183_N	300_G	0.588	0.62
159_S	223_S	0.587	0.62
20_L	47_L	0.586	0.62
289_V	292_E	0.586	0.62
219_S	264_G	0.585	0.62
10_Q	16_T	0.584	0.62
20_L	48_D	0.584	0.62
226_G	250_A	0.584	0.62
38_N	106_G	0.584	0.62
221_E	227_F	0.582	0.61
216_T	296_M	0.581	0.61
228_A	250_A	0.581	0.61
292_E	319_I	0.580	0.61
304_P	307_S	0.580	0.61
133_L	150_L	0.579	0.61
282_V	285_A	0.578	0.61
154_V	222_M	0.578	0.61
87_D	122_V	0.577	0.61
59_V	70_L	0.576	0.61
17_E	20_L	0.576	0.61
196_A	315_L	0.575	0.60
10_Q	15_V	0.574	0.60
298_V	305_L	0.573	0.60
274_S	304_P	0.572	0.60
55_G	61_G	0.572	0.60
62_H	66_A	0.570	0.60
271_A	311_A	0.569	0.60
299_R	302_D	0.568	0.59
163_V	193_L	0.566	0.59
131_G	162_L	0.565	0.59
192_I	203_V	0.564	0.59
59_V	62_H	0.563	0.59
36_A	48_D	0.562	0.59
116_V	153_L	0.559	0.58
17_E	36_A	0.556	0.58
191_G	227_F	0.554	0.58
135_G	138_E	0.553	0.57
121_R	215_N	0.553	0.57
144_A	295_S	0.553	0.57
95_E	211_S	0.552	0.57
96_A	284_K	0.551	0.57
38_N	63_G	0.551	0.57
242_T	310_I	0.550	0.57
103_L	129_A	0.550	0.57
264_G	295_S	0.549	0.57
81_E	87_D	0.547	0.57
14_K	109_S	0.545	0.56
188_R	227_F	0.545	0.56
120_Q	249_K	0.543	0.56
5_L	168_W	0.543	0.56
222_M	229_S	0.542	0.56
112_A	153_L	0.539	0.56
60_K	304_P	0.538	0.55
38_N	64_V	0.538	0.55
24_Q	195_A	0.537	0.55
174_S	187_A	0.536	0.55
46_G	203_V	0.536	0.55
166_D	170_S	0.536	0.55
262_E	294_R	0.536	0.55
210_S	213_V	0.536	0.55
99_V	124_E	0.535	0.55
63_G	67_D	0.535	0.55
79_V	121_R	0.534	0.55
62_H	65_G	0.533	0.55
164_D	204_G	0.533	0.55
163_V	209_D	0.533	0.55
67_D	70_L	0.532	0.55
228_A	232_A	0.530	0.54
44_L	54_I	0.530	0.54
294_R	307_S	0.528	0.54
230_A	233_A	0.528	0.54
243_I	288_W	0.527	0.54
68_N	109_S	0.527	0.54
190_V	216_T	0.527	0.54
82_V	86_L	0.526	0.54
136_R	261_T	0.525	0.54
273_E	280_K	0.525	0.54
124_E	224_A	0.525	0.54
207_V	210_S	0.525	0.54
274_S	290_E	0.523	0.53
249_K	295_S	0.522	0.53
137_D	300_G	0.521	0.53
266_A	269_V	0.521	0.53
25_R	81_E	0.521	0.53
9_G	14_K	0.520	0.53
12_G	15_V	0.520	0.53
80_R	84_G	0.520	0.53
144_A	323_Q	0.519	0.53
249_K	252_L	0.519	0.53
260_T	264_G	0.519	0.53
134_P	146_A	0.518	0.53
248_R	267_L	0.518	0.53
35_L	82_V	0.518	0.53
8_V	13_G	0.516	0.52
17_E	49_I	0.516	0.52
279_R	282_V	0.515	0.52
103_L	112_A	0.515	0.52
23_D	312_V	0.512	0.52
76_T	80_R	0.512	0.52
297_Q	302_D	0.512	0.52
61_G	106_G	0.512	0.52
7_G	16_T	0.512	0.52
14_K	20_L	0.510	0.52
202_G	302_D	0.510	0.52
203_V	303_F	0.509	0.51
137_D	179_F	0.508	0.51
5_L	34_T	0.508	0.51
264_G	290_E	0.507	0.51
288_W	293_T	0.506	0.51
140_G	294_R	0.504	0.51
268_V	312_V	0.503	0.51
247_A	259_Q	0.503	0.51
75_M	125_I	0.502	0.50
113_P	138_E	0.502	0.50
78_D	111_G	0.501	0.50
273_E	278_S	0.501	0.50
217_L	223_S	0.501	0.50
63_G	113_P	0.500	0.50
54_I	176_T	0.500	0.50

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4b45A	1	0.9356	100	0.19	Contact Map
4b46A	1	0.9076	100	0.217	Contact Map
4ei7A	1	0.93	100	0.237	Contact Map
2vapA	1	0.8711	100	0.254	Contact Map
1rq2A	2	0.8207	100	0.263	Contact Map
2vawA	1	0.8319	100	0.264	Contact Map
2vxyA	2	0.8347	100	0.265	Contact Map
1w5fA	2	0.8543	100	0.265	Contact Map
2r751	1	0.8824	100	0.266	Contact Map
4m8iA	1	0.8487	100	0.266	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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